Query 006031
Match_columns 664
No_of_seqs 595 out of 4306
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:09:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 7.9E-55 2.7E-59 449.6 22.5 254 389-651 41-303 (307)
2 4gt4_A Tyrosine-protein kinase 100.0 7E-55 2.4E-59 451.8 21.9 253 389-647 31-305 (308)
3 4aoj_A High affinity nerve gro 100.0 2.2E-54 7.4E-59 452.3 24.4 255 389-650 46-321 (329)
4 4asz_A BDNF/NT-3 growth factor 100.0 5.7E-55 2E-59 450.5 19.5 255 389-650 18-291 (299)
5 3fpq_A Serine/threonine-protei 100.0 2E-52 6.8E-57 428.6 19.5 243 390-641 32-282 (290)
6 4ase_A Vascular endothelial gr 100.0 6.2E-52 2.1E-56 437.2 16.8 261 388-653 68-352 (353)
7 3hmm_A TGF-beta receptor type- 100.0 2.8E-51 9.4E-56 425.4 20.6 251 389-649 8-298 (303)
8 4g3f_A NF-kappa-beta-inducing 100.0 2.9E-51 1E-55 427.1 18.3 246 389-649 63-317 (336)
9 4fih_A Serine/threonine-protei 100.0 4.7E-51 1.6E-55 426.8 18.9 241 389-641 79-323 (346)
10 4b9d_A Serine/threonine-protei 100.0 1.9E-51 6.7E-56 430.3 15.6 245 389-641 29-276 (350)
11 3hyh_A Carbon catabolite-derep 100.0 1.2E-49 4.2E-54 404.4 20.0 242 389-641 18-262 (275)
12 4fie_A Serine/threonine-protei 100.0 8.7E-50 3E-54 427.3 19.1 241 389-641 156-400 (423)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.7E-50 1.6E-54 413.1 15.7 242 388-640 36-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 4.8E-50 1.6E-54 412.9 14.6 243 388-641 28-281 (304)
15 4g31_A Eukaryotic translation 100.0 6.3E-48 2.1E-52 398.5 18.3 241 389-641 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 4.9E-46 1.7E-50 398.9 21.7 244 389-641 59-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 8E-45 2.7E-49 385.3 22.0 240 389-641 26-352 (361)
18 3v5w_A G-protein coupled recep 100.0 1.4E-44 4.9E-49 403.8 19.2 245 389-641 194-449 (689)
19 3p86_A Serine/threonine-protei 100.0 1.5E-43 5.2E-48 369.1 21.6 259 389-654 42-304 (309)
20 3uto_A Twitchin; kinase, muscl 100.0 5.9E-44 2E-48 401.1 17.4 243 389-641 162-410 (573)
21 2qkw_B Protein kinase; three-h 100.0 1.5E-42 5.2E-47 363.4 24.1 256 389-649 44-316 (321)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.7E-42 9.4E-47 359.6 24.9 249 389-650 15-284 (310)
23 2psq_A Fibroblast growth facto 100.0 1.1E-42 3.7E-47 371.9 21.8 257 389-651 86-367 (370)
24 4hcu_A Tyrosine-protein kinase 100.0 3.6E-42 1.2E-46 351.0 23.5 249 389-649 15-267 (269)
25 3uim_A Brassinosteroid insensi 100.0 3.6E-42 1.2E-46 361.3 22.4 271 376-649 17-312 (326)
26 3cbl_A C-FES, proto-oncogene t 100.0 4.4E-43 1.5E-47 376.1 15.5 252 388-649 118-375 (377)
27 3kul_A Ephrin type-A receptor 100.0 2.7E-42 9.3E-47 362.3 21.2 252 389-650 54-315 (325)
28 1qcf_A Haematopoetic cell kina 100.0 2.9E-42 1E-46 378.8 22.2 253 389-653 193-449 (454)
29 3fxz_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 356.7 21.3 242 389-641 25-269 (297)
30 3fe3_A MAP/microtubule affinit 100.0 2E-42 6.9E-47 363.5 19.7 244 389-642 20-265 (328)
31 2c30_A Serine/threonine-protei 100.0 1.4E-41 4.9E-46 356.2 26.1 241 390-642 51-295 (321)
32 3lb7_A RAF proto-oncogene seri 100.0 8.9E-42 3E-46 355.4 23.1 254 389-651 41-303 (307)
33 4f0f_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 349.3 24.9 250 389-646 24-287 (287)
34 3soc_A Activin receptor type-2 100.0 3.8E-42 1.3E-46 360.7 20.0 251 389-649 29-319 (322)
35 2qol_A Ephrin receptor; recept 100.0 2.8E-42 9.7E-47 369.0 19.1 251 389-649 50-310 (373)
36 3kmu_A ILK, integrin-linked ki 100.0 7.5E-42 2.6E-46 348.3 20.8 250 389-648 15-270 (271)
37 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.6E-42 1.6E-46 350.0 19.1 250 389-650 13-266 (268)
38 3dtc_A Mitogen-activated prote 100.0 8.1E-42 2.8E-46 348.6 20.5 247 389-646 12-271 (271)
39 3gen_A Tyrosine-protein kinase 100.0 1.9E-41 6.4E-46 348.3 23.3 249 389-649 29-281 (283)
40 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-41 4.2E-46 373.3 22.7 247 389-649 198-446 (450)
41 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.1E-42 2.4E-46 375.4 20.5 258 389-658 189-450 (452)
42 2nru_A Interleukin-1 receptor- 100.0 6.7E-41 2.3E-45 348.3 26.3 267 376-648 12-306 (307)
43 3niz_A Rhodanese family protei 100.0 3.6E-41 1.2E-45 351.5 23.9 246 389-641 26-300 (311)
44 3zgw_A Maternal embryonic leuc 100.0 6.8E-42 2.3E-46 361.8 18.3 243 389-642 15-261 (347)
45 3ugc_A Tyrosine-protein kinase 100.0 9.1E-42 3.1E-46 352.9 18.6 253 389-650 15-293 (295)
46 3q4u_A Activin receptor type-1 100.0 2.9E-41 9.9E-46 349.8 21.7 245 389-646 13-300 (301)
47 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-41 5E-46 377.0 20.3 250 389-649 225-479 (495)
48 3tt0_A Basic fibroblast growth 100.0 3.5E-41 1.2E-45 362.0 22.2 259 389-653 74-357 (382)
49 1ob3_A PFPK5, cell division co 100.0 3.4E-41 1.1E-45 347.6 20.8 246 389-641 7-280 (288)
50 3poz_A Epidermal growth factor 100.0 2.2E-41 7.4E-46 355.8 19.7 249 389-648 20-278 (327)
51 2yab_A Death-associated protei 100.0 9.6E-41 3.3E-45 355.1 24.7 244 389-641 17-272 (361)
52 3t9t_A Tyrosine-protein kinase 100.0 5.9E-41 2E-45 341.3 22.1 249 389-649 13-265 (267)
53 2ozo_A Tyrosine-protein kinase 100.0 6.6E-41 2.3E-45 380.6 24.9 256 391-657 343-607 (613)
54 1luf_A Muscle-specific tyrosin 100.0 2.6E-41 8.9E-46 357.1 20.0 257 389-651 52-338 (343)
55 2bdw_A Hypothetical protein K1 100.0 2.9E-41 9.8E-46 359.7 20.5 246 388-642 33-285 (362)
56 2eva_A TAK1 kinase - TAB1 chim 100.0 6.9E-41 2.4E-45 348.7 22.8 251 389-652 13-267 (307)
57 4eqm_A Protein kinase; transfe 100.0 1.6E-41 5.3E-46 351.3 17.5 255 389-651 16-278 (294)
58 3qup_A Tyrosine-protein kinase 100.0 2.8E-41 9.4E-46 354.0 19.5 262 388-654 27-304 (323)
59 2y0a_A Death-associated protei 100.0 4.6E-41 1.6E-45 353.1 21.1 245 388-641 15-271 (326)
60 3l9p_A Anaplastic lymphoma kin 100.0 1.8E-41 6.3E-46 362.1 18.1 256 389-650 76-347 (367)
61 3tki_A Serine/threonine-protei 100.0 2.4E-41 8.1E-46 354.8 18.6 246 389-642 12-262 (323)
62 3vhe_A Vascular endothelial gr 100.0 1.2E-41 4.2E-46 362.0 16.4 257 389-650 27-357 (359)
63 3og7_A AKAP9-BRAF fusion prote 100.0 3.6E-41 1.2E-45 347.6 19.1 251 389-648 29-288 (289)
64 1o6l_A RAC-beta serine/threoni 100.0 7.1E-41 2.4E-45 352.9 21.3 242 389-641 10-260 (337)
65 2zv2_A Calcium/calmodulin-depe 100.0 6.1E-41 2.1E-45 347.4 20.4 244 389-641 18-292 (298)
66 3soa_A Calcium/calmodulin-depe 100.0 4.5E-41 1.5E-45 367.1 20.4 244 389-641 16-267 (444)
67 2h8h_A Proto-oncogene tyrosine 100.0 2.8E-41 9.6E-46 378.2 19.3 257 388-656 271-531 (535)
68 3o0g_A Cell division protein k 100.0 8.9E-41 3E-45 345.1 21.1 247 389-641 7-282 (292)
69 1csn_A Casein kinase-1; phosph 100.0 1.3E-40 4.5E-45 344.4 22.0 252 389-651 15-286 (298)
70 3c1x_A Hepatocyte growth facto 100.0 5.5E-41 1.9E-45 358.8 19.5 256 389-654 94-361 (373)
71 2izr_A Casein kinase I isoform 100.0 8.4E-41 2.9E-45 351.7 20.6 250 389-650 14-283 (330)
72 4fvq_A Tyrosine-protein kinase 100.0 2.5E-41 8.6E-46 348.3 16.1 249 389-650 13-277 (289)
73 2ivs_A Proto-oncogene tyrosine 100.0 7.4E-41 2.5E-45 348.9 19.5 255 389-649 28-312 (314)
74 4euu_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 345.3 24.5 255 389-647 14-308 (319)
75 3op5_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 359.4 17.5 255 389-651 40-332 (364)
76 3p1a_A MYT1 kinase, membrane-a 100.0 7.1E-41 2.4E-45 349.3 19.1 240 389-641 62-304 (311)
77 3c0i_A Peripheral plasma membr 100.0 9.3E-41 3.2E-45 354.5 20.3 248 388-641 28-286 (351)
78 4fl3_A Tyrosine-protein kinase 100.0 5.7E-41 1.9E-45 382.2 19.6 249 390-649 375-632 (635)
79 3qd2_B Eukaryotic translation 100.0 2.7E-40 9.3E-45 347.1 23.4 243 389-641 11-325 (332)
80 1mp8_A Focal adhesion kinase 1 100.0 7.7E-41 2.6E-45 343.6 18.6 250 389-649 20-277 (281)
81 1tki_A Titin; serine kinase, m 100.0 3.6E-41 1.2E-45 353.1 16.5 242 389-641 10-257 (321)
82 2x4f_A Myosin light chain kina 100.0 5.9E-41 2E-45 358.7 18.3 247 390-646 95-349 (373)
83 2wqm_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 346.5 20.7 260 389-651 37-300 (310)
84 3kex_A Receptor tyrosine-prote 100.0 7.1E-41 2.4E-45 351.5 18.5 250 389-649 18-277 (325)
85 1t4h_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 343.6 20.0 244 389-641 31-282 (290)
86 3pls_A Macrophage-stimulating 100.0 2.4E-40 8.3E-45 342.4 22.1 257 389-654 26-293 (298)
87 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-40 3.9E-45 347.3 18.8 256 389-649 28-308 (313)
88 3f66_A Hepatocyte growth facto 100.0 3.4E-40 1.2E-44 341.6 21.9 255 389-653 30-296 (298)
89 4e5w_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 344.7 19.0 252 389-647 26-301 (302)
90 1u5q_A Serine/threonine protei 100.0 1.4E-40 4.7E-45 352.6 18.8 244 389-642 59-306 (348)
91 1rjb_A FL cytokine receptor; k 100.0 1.4E-40 4.7E-45 351.9 18.6 259 388-651 49-337 (344)
92 3uc3_A Serine/threonine-protei 100.0 1.4E-40 4.6E-45 354.5 18.6 245 389-642 25-275 (361)
93 4fr4_A YANK1, serine/threonine 100.0 3.1E-40 1.1E-44 353.4 21.4 245 389-641 20-271 (384)
94 1xbb_A Tyrosine-protein kinase 100.0 1.8E-40 6.2E-45 342.5 18.9 249 391-650 24-281 (291)
95 1mqb_A Ephrin type-A receptor 100.0 3.8E-40 1.3E-44 347.2 21.7 252 389-650 49-311 (333)
96 1qpc_A LCK kinase; alpha beta 100.0 3.8E-40 1.3E-44 337.8 21.0 251 389-651 18-272 (279)
97 3brb_A Proto-oncogene tyrosine 100.0 3.4E-40 1.2E-44 344.1 21.0 258 388-650 38-310 (313)
98 2pmi_A Negative RE, cyclin-dep 100.0 3.1E-40 1.1E-44 345.4 20.6 248 389-641 10-293 (317)
99 1fot_A TPK1 delta, CAMP-depend 100.0 3.7E-40 1.3E-44 344.7 21.1 241 389-641 11-258 (318)
100 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-40 8.9E-45 350.7 20.1 241 389-641 58-305 (349)
101 2pvf_A Fibroblast growth facto 100.0 2.2E-40 7.7E-45 349.0 19.4 258 388-651 39-321 (334)
102 3kfa_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 341.1 18.8 251 389-650 18-273 (288)
103 1u59_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 339.5 20.3 250 390-650 16-274 (287)
104 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-40 4.3E-45 350.7 17.1 243 389-642 14-259 (336)
105 3mdy_A Bone morphogenetic prot 100.0 1E-39 3.5E-44 343.8 23.8 250 388-650 41-333 (337)
106 3kk8_A Calcium/calmodulin depe 100.0 2.3E-40 7.8E-45 340.2 18.1 244 389-641 11-261 (284)
107 1kob_A Twitchin; kinase, intra 100.0 2.4E-40 8.2E-45 355.2 18.9 244 389-642 56-305 (387)
108 4agu_A Cyclin-dependent kinase 100.0 4E-40 1.4E-44 343.2 19.9 246 389-642 8-285 (311)
109 2yex_A Serine/threonine-protei 100.0 8.9E-40 3E-44 334.2 22.1 245 389-641 12-261 (276)
110 4dc2_A Protein kinase C IOTA t 100.0 3.6E-40 1.2E-44 354.2 20.0 239 389-636 57-307 (396)
111 3lzb_A Epidermal growth factor 100.0 4.2E-40 1.4E-44 345.9 19.7 250 389-649 20-279 (327)
112 3fdn_A Serine/threonine-protei 100.0 3E-40 1E-44 338.6 18.2 243 389-642 14-258 (279)
113 2v62_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 352.3 15.9 252 389-648 42-328 (345)
114 2zmd_A Dual specificity protei 100.0 3E-40 1E-44 355.5 18.7 245 389-642 61-321 (390)
115 3a62_A Ribosomal protein S6 ki 100.0 5.6E-40 1.9E-44 345.0 20.3 242 389-641 22-276 (327)
116 3dbq_A Dual specificity protei 100.0 2E-40 6.9E-45 350.7 17.0 245 389-642 14-274 (343)
117 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-40 3.8E-45 353.6 15.0 242 389-641 28-280 (353)
118 2y94_A 5'-AMP-activated protei 100.0 6.2E-40 2.1E-44 360.5 21.4 243 389-641 21-266 (476)
119 3a8x_A Protein kinase C IOTA t 100.0 6.5E-40 2.2E-44 346.9 20.7 239 389-636 14-264 (345)
120 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-40 7.2E-45 346.8 16.5 254 389-652 36-314 (318)
121 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.4E-40 1.9E-44 348.1 19.8 241 389-641 46-293 (350)
122 2eue_A Carbon catabolite derep 100.0 4.4E-40 1.5E-44 336.7 18.5 242 389-641 18-262 (275)
123 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-40 6.1E-45 347.0 15.8 253 389-651 38-305 (319)
124 3ork_A Serine/threonine protei 100.0 1.3E-40 4.3E-45 347.3 14.5 252 389-649 17-282 (311)
125 1xjd_A Protein kinase C, theta 100.0 1.8E-40 6.3E-45 350.7 15.6 241 389-640 22-268 (345)
126 3gni_B Strad alpha; kinase fol 100.0 9.3E-40 3.2E-44 351.7 21.3 254 389-647 30-341 (389)
127 2buj_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45 346.7 15.3 258 389-651 34-309 (317)
128 2a2a_A Death-associated protei 100.0 2E-39 6.7E-44 339.8 23.0 245 388-641 16-272 (321)
129 3is5_A Calcium-dependent prote 100.0 7.3E-40 2.5E-44 337.1 19.3 247 388-641 26-278 (285)
130 2i0e_A Protein kinase C-beta I 100.0 9.4E-40 3.2E-44 346.4 20.6 242 389-641 25-276 (353)
131 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-39 4.4E-44 336.6 21.1 252 389-651 14-283 (296)
132 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-39 5.3E-44 332.9 21.5 241 389-641 14-261 (277)
133 2ac3_A MAP kinase-interacting 100.0 8.7E-40 3E-44 341.4 19.7 244 390-641 19-295 (316)
134 3gxj_A TGF-beta receptor type- 100.0 3.3E-41 1.1E-45 349.5 8.8 249 389-650 8-299 (303)
135 2jii_A Serine/threonine-protei 100.0 2.8E-40 9.6E-45 350.9 16.2 250 389-651 47-339 (352)
136 1byg_A CSK, protein (C-termina 100.0 4.8E-40 1.6E-44 337.0 17.2 248 389-650 26-275 (278)
137 3eqc_A Dual specificity mitoge 100.0 3.2E-40 1.1E-44 351.4 16.5 246 389-641 38-324 (360)
138 3bhy_A Death-associated protei 100.0 9.7E-40 3.3E-44 335.4 19.4 254 389-651 10-277 (283)
139 3kn6_A Ribosomal protein S6 ki 100.0 4.1E-40 1.4E-44 345.7 16.9 241 389-641 16-270 (325)
140 3fme_A Dual specificity mitoge 100.0 6.3E-40 2.2E-44 337.8 17.9 250 389-641 12-266 (290)
141 3cc6_A Protein tyrosine kinase 100.0 7E-40 2.4E-44 336.3 18.0 250 389-649 17-274 (281)
142 3dls_A PAS domain-containing s 100.0 3.6E-40 1.2E-44 347.6 16.0 238 389-642 29-275 (335)
143 2xir_A Vascular endothelial gr 100.0 4.5E-40 1.5E-44 343.3 16.6 258 389-651 32-313 (316)
144 3lm5_A Serine/threonine-protei 100.0 6.3E-40 2.1E-44 344.6 17.8 246 390-642 35-288 (327)
145 1b6c_B TGF-B superfamily recep 100.0 4.1E-39 1.4E-43 340.1 24.1 249 389-650 47-338 (342)
146 4aw2_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 358.1 16.9 246 389-641 79-338 (437)
147 3hko_A Calcium/calmodulin-depe 100.0 5.4E-40 1.9E-44 347.3 17.2 251 388-641 30-330 (345)
148 2h34_A Serine/threonine-protei 100.0 8E-40 2.7E-44 340.9 18.2 253 389-650 39-298 (309)
149 4hgt_A Casein kinase I isoform 100.0 3.5E-39 1.2E-43 333.1 22.8 252 389-651 14-283 (296)
150 2jam_A Calcium/calmodulin-depe 100.0 8.7E-40 3E-44 339.6 18.0 242 389-641 14-261 (304)
151 1p4o_A Insulin-like growth fac 100.0 1E-39 3.5E-44 341.8 18.6 255 389-649 30-300 (322)
152 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.6E-40 3E-44 348.9 18.3 247 389-650 70-341 (365)
153 3mi9_A Cell division protein k 100.0 2.3E-39 8E-44 343.6 21.5 245 389-641 22-311 (351)
154 1fvr_A Tyrosine-protein kinase 100.0 1.9E-39 6.5E-44 340.8 20.5 256 389-650 30-302 (327)
155 2acx_A G protein-coupled recep 100.0 1.1E-39 3.9E-44 363.5 19.9 246 389-641 189-444 (576)
156 4ejn_A RAC-alpha serine/threon 100.0 5.1E-40 1.7E-44 360.3 16.8 242 389-641 153-404 (446)
157 1x8b_A WEE1HU, WEE1-like prote 100.0 9.3E-40 3.2E-44 335.7 17.7 243 389-641 16-279 (289)
158 2r5t_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 349.9 17.3 244 389-643 43-291 (373)
159 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.5E-40 2.2E-44 344.8 16.9 245 389-641 39-318 (329)
160 4eut_A Serine/threonine-protei 100.0 1.8E-39 6E-44 350.4 20.6 257 389-649 14-310 (396)
161 2vgo_A Serine/threonine-protei 100.0 1.6E-39 5.3E-44 334.3 19.2 242 389-641 19-262 (284)
162 1nxk_A MAP kinase-activated pr 100.0 1.4E-39 4.8E-44 351.4 19.8 241 390-642 68-322 (400)
163 2a19_B Interferon-induced, dou 100.0 1.5E-39 5E-44 333.9 19.0 244 389-651 16-277 (284)
164 3lxl_A Tyrosine-protein kinase 100.0 9.4E-40 3.2E-44 343.1 17.8 253 389-650 28-305 (327)
165 4aaa_A Cyclin-dependent kinase 100.0 1.3E-39 4.5E-44 342.7 18.8 246 389-641 30-306 (331)
166 3v8s_A RHO-associated protein 100.0 2.9E-40 9.8E-45 356.8 14.0 245 389-642 74-330 (410)
167 3oz6_A Mitogen-activated prote 100.0 8.4E-40 2.9E-44 352.0 17.4 250 389-647 14-336 (388)
168 3cok_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 333.7 17.9 243 389-641 16-262 (278)
169 3llt_A Serine/threonine kinase 100.0 5.6E-39 1.9E-43 341.8 23.3 241 389-641 40-355 (360)
170 3g2f_A Bone morphogenetic prot 100.0 8.4E-40 2.9E-44 344.6 16.7 254 389-654 18-324 (336)
171 3mwu_A Calmodulin-domain prote 100.0 2.5E-39 8.4E-44 358.8 21.3 244 389-642 27-277 (486)
172 3lij_A Calcium/calmodulin depe 100.0 2.2E-39 7.6E-44 359.8 20.9 244 389-642 42-292 (494)
173 2w1i_A JAK2; chromosomal rearr 100.0 9.5E-40 3.3E-44 343.0 16.9 253 389-650 46-324 (326)
174 3i6u_A CDS1, serine/threonine- 100.0 2.4E-39 8.2E-44 351.8 20.5 245 389-641 140-399 (419)
175 2i1m_A Macrophage colony-stimu 100.0 3.4E-40 1.2E-44 347.2 13.2 257 389-650 51-328 (333)
176 1u46_A ACK-1, activated CDC42 100.0 6.7E-40 2.3E-44 337.9 15.1 253 389-650 23-286 (291)
177 1vzo_A Ribosomal protein S6 ki 100.0 5.2E-40 1.8E-44 349.2 14.5 246 389-642 59-322 (355)
178 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-39 9.6E-44 359.5 20.8 242 390-636 191-438 (543)
179 3an0_A Dual specificity mitoge 100.0 1.3E-39 4.3E-44 344.0 17.1 249 389-641 56-310 (340)
180 2clq_A Mitogen-activated prote 100.0 3.6E-39 1.2E-43 333.0 20.1 246 390-641 28-278 (295)
181 3rp9_A Mitogen-activated prote 100.0 2.9E-39 9.9E-44 355.5 20.4 252 389-647 58-404 (458)
182 2w5a_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 337.1 12.7 250 389-644 11-270 (279)
183 2h6d_A 5'-AMP-activated protei 100.0 5E-39 1.7E-43 328.8 20.4 244 389-642 16-262 (276)
184 3g33_A Cell division protein k 100.0 4.5E-39 1.5E-43 334.9 20.3 246 389-641 14-296 (308)
185 3ttj_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43 354.5 20.3 243 389-642 67-356 (464)
186 3a7i_A MST3 kinase, serine/thr 100.0 6.6E-39 2.3E-43 332.8 21.0 242 389-642 27-271 (303)
187 2r3i_A Cell division protein k 100.0 9E-39 3.1E-43 330.9 22.0 247 389-641 8-283 (299)
188 2vd5_A DMPK protein; serine/th 100.0 8.4E-40 2.9E-44 353.3 14.6 245 389-641 66-327 (412)
189 3mtl_A Cell division protein k 100.0 1.4E-39 4.6E-44 341.6 15.6 252 389-649 7-291 (324)
190 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-39 8.7E-44 342.6 17.7 247 389-641 36-322 (348)
191 1ua2_A CAK, cell division prot 100.0 4.9E-39 1.7E-43 340.5 19.9 247 389-642 15-292 (346)
192 1cm8_A Phosphorylated MAP kina 100.0 7.1E-39 2.4E-43 342.0 21.2 249 389-647 30-315 (367)
193 2rku_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 333.2 18.4 243 389-642 20-266 (294)
194 3n9x_A Phosphotransferase; mal 100.0 5.4E-39 1.8E-43 350.5 20.7 253 389-648 31-370 (432)
195 2yfx_A Tyrosine-protein kinase 100.0 3.9E-39 1.4E-43 338.4 18.8 256 389-650 35-306 (327)
196 3nyv_A Calmodulin-domain prote 100.0 3.1E-39 1.1E-43 357.8 18.8 243 389-641 31-281 (484)
197 2j7t_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 334.2 18.0 245 389-641 24-275 (302)
198 2owb_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 339.9 17.7 243 389-642 46-292 (335)
199 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-38 3.8E-43 355.0 22.0 243 389-641 41-301 (504)
200 2qr7_A Ribosomal protein S6 ki 100.0 3.8E-39 1.3E-43 340.6 17.0 240 389-641 27-277 (342)
201 2y7j_A Phosphorylase B kinase 100.0 5.9E-39 2E-43 342.4 18.7 244 390-641 100-359 (365)
202 3byv_A Rhoptry kinase; malaria 100.0 2.8E-40 9.7E-45 354.3 8.5 248 389-648 78-368 (377)
203 3com_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 331.8 21.1 241 389-641 34-278 (314)
204 3ll6_A Cyclin G-associated kin 100.0 4.2E-39 1.4E-43 338.8 17.1 251 388-650 32-310 (337)
205 3rgf_A Cyclin-dependent kinase 100.0 3.1E-39 1.1E-43 349.6 16.4 247 389-641 26-333 (405)
206 2vwi_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 334.4 15.4 250 389-641 20-287 (303)
207 3nsz_A CK II alpha, casein kin 100.0 2.4E-38 8.4E-43 332.5 21.3 239 389-641 41-319 (330)
208 2xrw_A Mitogen-activated prote 100.0 2.6E-38 8.9E-43 338.2 21.6 243 389-642 30-319 (371)
209 2fst_X Mitogen-activated prote 100.0 7.7E-39 2.6E-43 341.5 17.3 244 389-642 34-312 (367)
210 3sv0_A Casein kinase I-like; t 100.0 4.2E-38 1.4E-42 346.6 23.6 251 389-650 12-280 (483)
211 3kvw_A DYRK2, dual specificity 100.0 3.3E-38 1.1E-42 343.8 22.5 242 389-641 102-408 (429)
212 3pg1_A Mitogen-activated prote 100.0 2.3E-38 7.9E-43 337.3 20.7 247 389-642 27-317 (362)
213 2ycf_A Serine/threonine-protei 100.0 1E-38 3.4E-43 334.5 17.4 245 389-641 15-274 (322)
214 2wei_A Calmodulin-domain prote 100.0 2E-38 6.7E-43 326.6 19.0 243 389-641 27-276 (287)
215 2x7f_A TRAF2 and NCK-interacti 100.0 2.2E-38 7.4E-43 332.3 18.9 244 389-641 29-286 (326)
216 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-38 6.4E-43 363.9 19.8 242 389-641 346-597 (674)
217 1zy4_A Serine/threonine-protei 100.0 2.2E-38 7.4E-43 328.0 18.4 241 389-641 11-283 (303)
218 4exu_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 336.9 20.8 243 389-642 47-324 (371)
219 2j0j_A Focal adhesion kinase 1 100.0 2E-38 6.7E-43 362.6 19.5 251 388-649 394-652 (656)
220 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-39 5.5E-44 347.6 9.8 245 389-641 67-352 (371)
221 1phk_A Phosphorylase kinase; g 100.0 1.5E-38 5.1E-43 329.0 16.7 245 389-641 22-283 (298)
222 3qyz_A Mitogen-activated prote 100.0 3.1E-38 1.1E-42 336.7 19.3 243 389-641 32-313 (364)
223 4e7w_A Glycogen synthase kinas 100.0 4.6E-38 1.6E-42 339.0 20.8 251 389-649 45-331 (394)
224 3eb0_A Putative uncharacterize 100.0 2.4E-38 8.3E-43 340.0 18.2 250 389-648 12-330 (383)
225 2wtk_C Serine/threonine-protei 100.0 5.3E-38 1.8E-42 326.0 19.9 245 389-642 10-264 (305)
226 1blx_A Cyclin-dependent kinase 100.0 6.1E-38 2.1E-42 328.7 20.3 246 389-641 16-296 (326)
227 1j1b_A Glycogen synthase kinas 100.0 3.1E-38 1.1E-42 343.1 18.5 251 389-649 59-346 (420)
228 1z57_A Dual specificity protei 100.0 1.1E-37 3.6E-42 328.2 21.9 247 389-647 19-336 (339)
229 3cek_A Dual specificity protei 100.0 2.4E-38 8.2E-43 330.2 16.8 245 389-642 33-293 (313)
230 2dyl_A Dual specificity mitoge 100.0 3.3E-38 1.1E-42 329.5 17.6 248 389-641 30-283 (318)
231 2i6l_A Mitogen-activated prote 100.0 9.5E-38 3.3E-42 326.0 20.7 242 389-641 16-305 (320)
232 3aln_A Dual specificity mitoge 100.0 9.2E-39 3.2E-43 335.5 13.0 251 389-641 27-285 (327)
233 3fhr_A MAP kinase-activated pr 100.0 3.1E-38 1.1E-42 333.0 16.9 242 389-641 34-287 (336)
234 1wak_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 337.2 19.9 244 389-641 42-391 (397)
235 3a99_A Proto-oncogene serine/t 100.0 7.3E-39 2.5E-43 335.4 11.7 237 389-641 48-293 (320)
236 3coi_A Mitogen-activated prote 100.0 9.1E-38 3.1E-42 331.6 19.4 243 389-642 29-306 (353)
237 3e3p_A Protein kinase, putativ 100.0 1.2E-37 4E-42 331.4 19.8 254 389-649 28-324 (360)
238 2iwi_A Serine/threonine-protei 100.0 1.5E-38 5E-43 331.6 12.4 237 389-641 36-283 (312)
239 2b9h_A MAP kinase FUS3, mitoge 100.0 9E-38 3.1E-42 331.4 18.5 250 389-648 16-314 (353)
240 2rio_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 341.7 16.9 243 389-641 20-295 (434)
241 2vx3_A Dual specificity tyrosi 100.0 6E-37 2.1E-41 329.0 21.9 193 389-590 59-261 (382)
242 3p23_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 335.9 19.1 240 389-641 29-283 (432)
243 2eu9_A Dual specificity protei 100.0 6.4E-37 2.2E-41 324.5 20.6 241 389-641 24-333 (355)
244 1q8y_A SR protein kinase; tran 100.0 5.1E-37 1.7E-41 328.0 19.3 244 389-641 24-333 (373)
245 3uqc_A Probable conserved tran 100.0 1.5E-36 5.1E-41 312.6 15.7 226 389-650 36-267 (286)
246 2pzi_A Probable serine/threoni 100.0 3.9E-36 1.3E-40 346.4 18.3 235 389-647 85-327 (681)
247 3qa8_A MGC80376 protein; kinas 100.0 2.2E-36 7.4E-41 340.4 13.1 253 388-649 18-310 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 4.8E-36 1.6E-40 325.2 12.6 241 389-641 83-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.4E-35 4.9E-40 307.2 15.5 218 390-641 24-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 309.5 9.3 235 387-640 23-329 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-28 4.4E-33 256.7 14.9 193 37-231 2-207 (313)
252 4azs_A Methyltransferase WBDD; 99.9 4.8E-29 1.6E-33 279.9 5.5 184 391-585 241-436 (569)
253 3rgz_A Protein brassinosteroid 99.9 2.8E-27 9.5E-32 276.4 13.2 193 39-232 10-234 (768)
254 3en9_A Glycoprotease, O-sialog 99.9 1.4E-26 4.9E-31 258.4 5.0 183 389-588 341-539 (540)
255 4ecn_A Leucine-rich repeat pro 99.9 1.4E-25 4.6E-30 261.9 7.4 189 39-232 267-584 (876)
256 4eco_A Uncharacterized protein 99.9 2.5E-25 8.7E-30 254.2 9.1 189 40-231 29-340 (636)
257 3rgz_A Protein brassinosteroid 99.9 6.5E-24 2.2E-28 247.9 13.6 164 80-245 514-750 (768)
258 4fcg_A Uncharacterized protein 99.9 5.6E-24 1.9E-28 223.1 9.2 192 38-234 24-242 (328)
259 3m19_A Variable lymphocyte rec 99.9 2.7E-21 9.3E-26 194.5 16.9 168 68-236 3-194 (251)
260 1zar_A RIO2 kinase; serine kin 99.9 1.8E-22 6.1E-27 206.6 8.0 141 390-559 96-252 (282)
261 1ogq_A PGIP-2, polygalacturona 99.8 2.2E-21 7.4E-26 201.9 9.6 161 80-243 125-312 (313)
262 3e6j_A Variable lymphocyte rec 99.8 3.6E-20 1.2E-24 183.7 16.3 148 66-215 15-176 (229)
263 2o6q_A Variable lymphocyte rec 99.8 1.3E-19 4.4E-24 184.4 18.2 150 81-231 38-191 (270)
264 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-20 9.1E-25 183.4 10.8 146 70-215 11-170 (220)
265 2o6s_A Variable lymphocyte rec 99.8 1.9E-19 6.6E-24 175.5 15.5 146 69-215 6-165 (208)
266 2v9t_B SLIT homolog 2 protein 99.8 6.2E-19 2.1E-23 173.6 14.5 153 70-236 11-167 (220)
267 3rfs_A Internalin B, repeat mo 99.8 3.6E-18 1.2E-22 173.9 17.2 155 80-237 63-221 (272)
268 2v70_A SLIT-2, SLIT homolog 2 99.8 2.9E-18 1E-22 168.7 15.5 158 74-238 8-170 (220)
269 2xot_A Amphoterin-induced prot 99.8 6E-19 2E-23 187.3 11.3 165 70-237 18-205 (361)
270 1w8a_A SLIT protein; signaling 99.8 5.3E-19 1.8E-23 170.2 8.8 150 85-238 13-166 (192)
271 2v9t_B SLIT homolog 2 protein 99.8 4.4E-18 1.5E-22 167.5 15.1 133 80-213 32-167 (220)
272 1w8a_A SLIT protein; signaling 99.8 1.1E-18 3.8E-23 167.9 10.5 166 69-236 7-185 (192)
273 1zth_A RIO1 serine protein kin 99.8 1.1E-18 3.9E-23 176.1 10.2 135 389-538 52-219 (258)
274 1p9a_G Platelet glycoprotein I 99.8 8.6E-18 2.9E-22 172.7 16.4 155 80-237 55-211 (290)
275 3e6j_A Variable lymphocyte rec 99.7 3E-17 1E-21 162.6 17.2 159 71-237 13-175 (229)
276 3zyi_A Leucine-rich repeat-con 99.7 1.2E-17 4.2E-22 182.7 15.3 158 72-231 56-228 (452)
277 1ozn_A Reticulon 4 receptor; N 99.7 1.2E-17 4E-22 171.1 13.9 155 81-236 81-240 (285)
278 2z81_A CD282 antigen, TOLL-lik 99.7 4.5E-18 1.5E-22 190.7 10.7 161 69-231 3-182 (549)
279 1ozn_A Reticulon 4 receptor; N 99.7 2.7E-17 9.1E-22 168.4 15.5 152 80-232 32-188 (285)
280 3zyj_A Leucine-rich repeat-con 99.7 1.3E-17 4.5E-22 181.8 13.7 158 72-231 45-217 (440)
281 1p9a_G Platelet glycoprotein I 99.7 2.9E-17 9.8E-22 168.8 15.2 150 80-232 31-183 (290)
282 3v47_A TOLL-like receptor 5B a 99.7 1.4E-17 4.7E-22 182.2 12.3 149 67-216 5-172 (455)
283 2z62_A TOLL-like receptor 4, v 99.7 3E-17 1E-21 167.2 13.6 157 80-237 52-240 (276)
284 3j0a_A TOLL-like receptor 5; m 99.7 1.1E-17 3.8E-22 197.2 11.8 136 101-238 422-564 (844)
285 4fcg_A Uncharacterized protein 99.7 3.8E-17 1.3E-21 171.0 13.9 150 80-232 104-264 (328)
286 3rfs_A Internalin B, repeat mo 99.7 6.7E-17 2.3E-21 164.4 15.2 136 80-216 85-223 (272)
287 3m19_A Variable lymphocyte rec 99.7 8.1E-17 2.8E-21 161.7 15.6 135 80-215 59-196 (251)
288 2o6r_A Variable lymphocyte rec 99.7 3.6E-17 1.2E-21 155.1 12.1 134 69-216 6-142 (177)
289 2z80_A TOLL-like receptor 2, v 99.7 1.7E-17 5.8E-22 175.4 10.9 163 67-232 27-209 (353)
290 2o6s_A Variable lymphocyte rec 99.7 2E-16 6.7E-21 154.1 17.0 151 83-237 10-164 (208)
291 4ezg_A Putative uncharacterize 99.7 4.4E-17 1.5E-21 157.3 11.7 148 80-232 44-192 (197)
292 2z62_A TOLL-like receptor 4, v 99.7 4.4E-17 1.5E-21 166.0 12.2 134 81-215 29-166 (276)
293 2z66_A Variable lymphocyte rec 99.7 2.1E-17 7.2E-22 171.0 9.8 161 69-231 6-185 (306)
294 4g8a_A TOLL-like receptor 4; l 99.7 3.7E-17 1.3E-21 186.1 12.3 134 81-215 53-190 (635)
295 4b8c_D Glucose-repressible alc 99.7 8.8E-18 3E-22 194.0 6.8 174 38-215 129-333 (727)
296 3zyj_A Leucine-rich repeat-con 99.7 1.1E-16 3.8E-21 174.5 15.1 154 81-237 113-295 (440)
297 3vq2_A TLR4, TOLL-like recepto 99.7 6.2E-17 2.1E-21 183.8 13.5 136 80-216 32-171 (606)
298 2z66_A Variable lymphocyte rec 99.7 5.2E-17 1.8E-21 168.0 11.5 157 80-236 101-263 (306)
299 3cvr_A Invasion plasmid antige 99.7 5.1E-17 1.7E-21 181.4 12.2 147 66-232 39-191 (571)
300 3zyi_A Leucine-rich repeat-con 99.7 1.4E-16 4.9E-21 174.2 15.4 111 126-238 194-307 (452)
301 3oja_A Leucine-rich immune mol 99.7 2.6E-17 8.9E-22 181.7 9.6 150 80-232 58-225 (487)
302 3oja_B Anopheles plasmodium-re 99.7 6.4E-17 2.2E-21 183.4 13.0 148 81-231 52-202 (597)
303 3vq2_A TLR4, TOLL-like recepto 99.7 4.2E-17 1.4E-21 185.1 10.8 158 81-238 400-562 (606)
304 4eco_A Uncharacterized protein 99.7 2E-17 6.8E-22 188.8 7.5 134 98-232 199-364 (636)
305 4glp_A Monocyte differentiatio 99.7 7.3E-17 2.5E-21 167.4 10.6 148 81-232 146-305 (310)
306 2id5_A Lingo-1, leucine rich r 99.7 1.2E-16 4.1E-21 176.0 12.7 160 72-232 13-187 (477)
307 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.3E-21 149.2 10.9 133 80-214 24-163 (168)
308 2xwt_C Thyrotropin receptor; s 99.7 1.4E-16 4.7E-21 158.7 10.9 152 80-234 31-192 (239)
309 3v47_A TOLL-like receptor 5B a 99.7 1.1E-16 3.9E-21 174.9 11.1 134 105-238 275-412 (455)
310 2je0_A Acidic leucine-rich nuc 99.7 9.9E-17 3.4E-21 147.4 8.4 126 80-207 17-149 (149)
311 1wwl_A Monocyte differentiatio 99.7 8.4E-17 2.9E-21 167.1 8.6 149 80-232 121-285 (312)
312 3o6n_A APL1; leucine-rich repe 99.7 3.3E-16 1.1E-20 167.9 12.7 148 80-231 45-196 (390)
313 3t6q_A CD180 antigen; protein- 99.7 2.3E-16 7.8E-21 179.1 12.1 159 72-231 14-189 (606)
314 2wfh_A SLIT homolog 2 protein 99.7 3.4E-16 1.2E-20 150.6 11.4 126 85-214 15-142 (193)
315 3oja_A Leucine-rich immune mol 99.7 9.4E-17 3.2E-21 177.2 8.1 153 80-238 99-254 (487)
316 1wwl_A Monocyte differentiatio 99.7 7.2E-17 2.5E-21 167.6 6.8 152 80-232 95-264 (312)
317 1xku_A Decorin; proteoglycan, 99.6 1.1E-15 3.9E-20 159.7 15.8 158 68-231 29-202 (330)
318 3j0a_A TOLL-like receptor 5; m 99.6 3.8E-16 1.3E-20 184.1 13.5 161 70-231 14-184 (844)
319 3t6q_A CD180 antigen; protein- 99.6 2.7E-16 9.4E-21 178.4 10.4 134 80-214 376-516 (606)
320 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.1E-15 3.7E-20 171.9 15.2 155 80-238 353-514 (562)
321 1ziw_A TOLL-like receptor 3; i 99.6 5.2E-16 1.8E-20 178.6 12.7 151 80-231 25-181 (680)
322 1h6t_A Internalin B; cell adhe 99.6 7.5E-16 2.6E-20 158.2 12.1 145 80-233 68-212 (291)
323 2z7x_B TOLL-like receptor 1, v 99.6 5.5E-16 1.9E-20 172.6 11.9 154 80-237 324-484 (520)
324 2ft3_A Biglycan; proteoglycan, 99.6 1.4E-15 4.9E-20 159.2 14.3 157 69-231 32-203 (332)
325 2z63_A TOLL-like receptor 4, v 99.6 4.3E-16 1.5E-20 175.3 10.0 155 80-236 373-533 (570)
326 4ecn_A Leucine-rich repeat pro 99.6 3.4E-16 1.2E-20 182.8 9.0 149 80-232 448-630 (876)
327 4ezg_A Putative uncharacterize 99.6 1.4E-15 4.9E-20 146.7 11.7 129 80-212 66-195 (197)
328 2o6q_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 150.7 15.5 156 80-236 61-220 (270)
329 1xeu_A Internalin C; cellular 99.6 1.6E-15 5.4E-20 153.4 12.1 146 80-235 41-186 (263)
330 3o53_A Protein LRIM1, AGAP0063 99.6 2.6E-16 8.9E-21 163.8 6.3 150 80-232 58-225 (317)
331 2wfh_A SLIT homolog 2 protein 99.6 3.5E-15 1.2E-19 143.5 13.7 128 108-238 13-143 (193)
332 4g8a_A TOLL-like receptor 4; l 99.6 1.4E-15 4.7E-20 173.1 12.4 157 81-237 421-583 (635)
333 1h6u_A Internalin H; cell adhe 99.6 2.6E-15 8.9E-20 155.5 13.4 144 80-232 63-206 (308)
334 3oja_B Anopheles plasmodium-re 99.6 3.2E-15 1.1E-19 169.4 15.3 110 80-190 75-185 (597)
335 1m9s_A Internalin B; cell inva 99.6 2.6E-15 9.1E-20 169.2 13.3 145 80-233 65-209 (605)
336 4gyi_A RIO2 kinase; protein ki 99.6 2.6E-16 8.8E-21 165.5 4.4 135 389-537 100-264 (397)
337 2xwt_C Thyrotropin receptor; s 99.6 1.7E-15 6E-20 150.7 9.9 149 80-232 55-216 (239)
338 2id5_A Lingo-1, leucine rich r 99.6 2.4E-15 8.3E-20 165.5 12.0 154 80-234 56-213 (477)
339 2xot_A Amphoterin-induced prot 99.6 5.7E-15 2E-19 156.5 14.0 156 69-232 11-174 (361)
340 1h6u_A Internalin H; cell adhe 99.6 3E-15 1E-19 155.1 11.5 145 80-233 85-229 (308)
341 2ell_A Acidic leucine-rich nuc 99.6 2.4E-15 8.2E-20 141.0 9.6 128 103-232 22-158 (168)
342 1h6t_A Internalin B; cell adhe 99.6 5.9E-15 2E-19 151.5 13.1 144 80-232 46-189 (291)
343 1ziw_A TOLL-like receptor 3; i 99.6 4.9E-15 1.7E-19 170.5 13.6 156 81-237 455-625 (680)
344 2z80_A TOLL-like receptor 2, v 99.6 2.4E-15 8.3E-20 158.8 9.9 110 80-191 76-189 (353)
345 4glp_A Monocyte differentiatio 99.6 1.4E-15 4.9E-20 157.6 7.8 151 81-232 92-262 (310)
346 1xku_A Decorin; proteoglycan, 99.6 1.5E-14 5E-19 151.3 15.3 149 80-232 121-274 (330)
347 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 5.6E-15 1.9E-19 166.2 12.9 130 102-231 350-483 (562)
348 3o53_A Protein LRIM1, AGAP0063 99.6 1.8E-15 6.2E-20 157.3 7.9 152 80-237 99-253 (317)
349 3o6n_A APL1; leucine-rich repe 99.6 1.5E-14 5.1E-19 154.9 15.1 109 80-190 69-179 (390)
350 2ft3_A Biglycan; proteoglycan, 99.6 1.7E-14 5.8E-19 151.0 15.2 146 82-232 125-275 (332)
351 2je0_A Acidic leucine-rich nuc 99.6 3.2E-15 1.1E-19 137.2 8.1 111 103-215 15-130 (149)
352 2z63_A TOLL-like receptor 4, v 99.6 4.3E-15 1.5E-19 167.1 10.8 140 80-219 396-539 (570)
353 2o6r_A Variable lymphocyte rec 99.6 3.6E-14 1.2E-18 134.2 14.4 129 107-237 9-140 (177)
354 2z7x_B TOLL-like receptor 1, v 99.6 1E-14 3.6E-19 162.2 12.1 149 81-232 303-455 (520)
355 1dce_A Protein (RAB geranylger 99.5 1.1E-14 3.7E-19 163.2 11.6 107 82-193 443-550 (567)
356 2z81_A CD282 antigen, TOLL-lik 99.5 2.2E-14 7.4E-19 160.7 13.8 152 75-232 2-159 (549)
357 4b8c_D Glucose-repressible alc 99.5 6.4E-16 2.2E-20 178.5 1.1 131 80-215 224-358 (727)
358 3g39_A Variable lymphocyte rec 99.5 1.4E-14 4.7E-19 136.3 10.1 105 84-192 13-118 (170)
359 1a9n_A U2A', U2A'; complex (nu 99.5 7.6E-15 2.6E-19 138.9 8.1 128 80-212 19-154 (176)
360 1o6v_A Internalin A; bacterial 99.5 1.7E-14 5.7E-19 158.4 11.8 143 80-231 221-363 (466)
361 1dce_A Protein (RAB geranylger 99.5 1.8E-14 6.1E-19 161.5 12.1 109 106-218 442-553 (567)
362 3cvr_A Invasion plasmid antige 99.5 3.4E-14 1.2E-18 158.6 13.4 113 81-211 81-193 (571)
363 1m9s_A Internalin B; cell inva 99.5 1.9E-14 6.5E-19 162.3 11.4 144 80-232 43-186 (605)
364 3g39_A Variable lymphocyte rec 99.5 5.3E-14 1.8E-18 132.3 12.6 108 107-216 11-120 (170)
365 1xeu_A Internalin C; cellular 99.5 6.6E-14 2.3E-18 141.4 13.5 126 80-214 63-188 (263)
366 3bz5_A Internalin-J, INLJ; leu 99.5 9.4E-14 3.2E-18 151.8 15.5 137 81-231 65-201 (457)
367 4ay9_X Follicle-stimulating ho 99.5 3.6E-14 1.2E-18 149.7 10.8 160 70-230 9-186 (350)
368 3bz5_A Internalin-J, INLJ; leu 99.5 5.3E-14 1.8E-18 153.8 12.2 141 80-233 148-298 (457)
369 4fmz_A Internalin; leucine ric 99.5 5.9E-14 2E-18 147.6 11.6 144 80-232 177-322 (347)
370 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 130.3 12.6 105 83-191 15-120 (174)
371 1ds9_A Outer arm dynein; leuci 99.5 6.2E-17 2.1E-21 156.4 -10.5 132 81-216 19-158 (198)
372 2r9u_A Variable lymphocyte rec 99.5 1.3E-13 4.5E-18 130.0 12.0 108 107-216 14-123 (174)
373 1o6v_A Internalin A; bacterial 99.5 8.8E-14 3E-18 152.6 12.4 144 80-232 199-342 (466)
374 1a9n_A U2A', U2A'; complex (nu 99.5 2.8E-14 9.6E-19 134.9 7.3 128 100-231 14-150 (176)
375 3g06_A SSPH2 (leucine-rich rep 99.5 7.7E-14 2.6E-18 157.5 11.4 133 63-212 15-155 (622)
376 2ast_B S-phase kinase-associat 99.5 1.4E-15 4.8E-20 159.2 -3.2 160 68-231 35-205 (336)
377 4fmz_A Internalin; leucine ric 99.5 9.1E-14 3.1E-18 146.1 10.4 144 80-232 199-344 (347)
378 1jl5_A Outer protein YOPM; leu 99.5 3.9E-13 1.3E-17 146.8 15.7 117 105-231 131-247 (454)
379 2ifg_A High affinity nerve gro 99.5 1.1E-13 3.8E-18 145.6 10.9 107 70-190 8-117 (347)
380 1jl5_A Outer protein YOPM; leu 99.4 1.6E-12 5.3E-17 142.0 15.9 136 80-231 131-267 (454)
381 2ifg_A High affinity nerve gro 99.4 1.1E-12 3.8E-17 137.9 11.2 106 108-214 11-119 (347)
382 2ast_B S-phase kinase-associat 99.3 6.1E-14 2.1E-18 146.7 -1.2 153 80-234 70-235 (336)
383 3g06_A SSPH2 (leucine-rich rep 99.3 7.4E-12 2.5E-16 141.4 15.1 116 105-233 181-296 (622)
384 2ca6_A RAN GTPase-activating p 99.3 1.6E-13 5.4E-18 146.7 -1.3 155 79-233 121-315 (386)
385 2ca6_A RAN GTPase-activating p 99.3 1.8E-13 6.2E-18 146.2 -1.3 152 80-231 32-226 (386)
386 3goz_A Leucine-rich repeat-con 99.3 5.5E-13 1.9E-17 141.2 1.4 107 82-189 24-151 (362)
387 1ds9_A Outer arm dynein; leuci 99.3 1.5E-14 5.3E-19 139.5 -10.1 129 101-233 14-152 (198)
388 4ay9_X Follicle-stimulating ho 99.3 1.1E-11 3.7E-16 130.6 10.8 135 80-215 54-219 (350)
389 3goz_A Leucine-rich repeat-con 99.2 1.2E-12 4.2E-17 138.6 1.6 147 84-231 2-177 (362)
390 3tm0_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.6E-15 116.8 10.1 134 390-536 20-212 (263)
391 3rw6_A Nuclear RNA export fact 99.0 9E-13 3.1E-17 132.1 -10.2 146 68-215 76-237 (267)
392 1z7x_W Ribonuclease inhibitor; 99.0 1.4E-11 4.7E-16 134.6 -2.0 153 80-232 227-409 (461)
393 1z7x_W Ribonuclease inhibitor; 99.0 6.7E-12 2.3E-16 137.1 -6.4 152 80-232 199-381 (461)
394 1nd4_A Aminoglycoside 3'-phosp 99.0 5.7E-10 1.9E-14 111.7 7.7 127 392-536 27-213 (264)
395 3dxp_A Putative acyl-COA dehyd 98.9 1.9E-09 6.5E-14 113.7 9.9 139 390-537 44-248 (359)
396 3un9_A NLR family member X1; l 98.9 5E-11 1.7E-15 126.4 -4.3 107 105-211 101-224 (372)
397 3un9_A NLR family member X1; l 98.8 9.1E-11 3.1E-15 124.4 -7.1 134 80-213 101-254 (372)
398 3ogk_B Coronatine-insensitive 98.6 1.5E-09 5.1E-14 122.4 -2.8 131 102-232 375-524 (592)
399 3rw6_A Nuclear RNA export fact 98.6 1.2E-09 4.2E-14 109.3 -3.3 92 100-193 136-237 (267)
400 3sg8_A APH(2'')-ID; antibiotic 98.6 8.6E-09 2.9E-13 106.0 3.0 180 390-587 26-287 (304)
401 3sb4_A Hypothetical leucine ri 98.6 1.7E-07 5.8E-12 97.4 10.6 38 80-119 101-138 (329)
402 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5.1E-13 96.2 -0.8 112 100-211 31-164 (185)
403 3sb4_A Hypothetical leucine ri 98.4 4E-07 1.4E-11 94.6 9.0 77 80-157 49-153 (329)
404 3ogk_B Coronatine-insensitive 98.4 2.4E-08 8.4E-13 112.3 -1.3 126 80-207 112-252 (592)
405 3r70_A Aminoglycoside phosphot 98.4 7.6E-07 2.6E-11 92.1 9.7 130 390-538 43-238 (320)
406 2p1m_B Transport inhibitor res 98.3 2.4E-08 8.1E-13 112.4 -3.7 128 104-232 371-517 (594)
407 3d1u_A Putative fructosamine-3 98.3 2.2E-06 7.5E-11 87.2 10.4 74 390-469 21-97 (288)
408 1io0_A Tropomodulin; LRR prote 98.2 1.3E-07 4.4E-12 89.6 -1.3 110 79-189 35-164 (185)
409 3tdw_A Gentamicin resistance p 98.2 9.2E-06 3.1E-10 83.3 11.6 133 390-537 25-224 (306)
410 2ra8_A Uncharacterized protein 98.1 6E-07 2.1E-11 94.3 2.6 111 100-212 167-293 (362)
411 2p1m_B Transport inhibitor res 98.1 1.8E-07 6.2E-12 105.2 -1.6 104 103-208 103-221 (594)
412 4gkh_A Aminoglycoside 3'-phosp 98.1 1.1E-05 3.7E-10 81.0 10.3 132 391-536 31-222 (272)
413 2ra8_A Uncharacterized protein 98.1 9E-07 3.1E-11 92.9 2.1 129 80-213 172-322 (362)
414 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.4E-05 4.8E-10 84.0 10.8 141 390-538 47-244 (362)
415 3ats_A Putative uncharacterize 97.9 1.1E-05 3.9E-10 84.4 6.1 81 390-470 26-121 (357)
416 2q83_A YTAA protein; 2635576, 97.8 0.00012 4.1E-09 75.8 11.5 140 390-536 38-251 (346)
417 4fdw_A Leucine rich hypothetic 97.6 0.00025 8.6E-09 75.4 11.5 77 82-161 159-235 (401)
418 2olc_A MTR kinase, methylthior 97.5 0.00025 8.6E-09 75.3 10.2 76 390-467 36-120 (397)
419 3f7w_A Putative fructosamine-3 97.5 0.00025 8.7E-09 71.7 9.8 74 390-469 21-97 (288)
420 4fdw_A Leucine rich hypothetic 97.5 0.00035 1.2E-08 74.4 10.4 127 81-215 227-362 (401)
421 3rfe_A Platelet glycoprotein I 97.0 0.001 3.4E-08 58.6 6.7 36 153-188 32-67 (130)
422 3e4g_A ATP synthase subunit S, 97.0 0.00013 4.5E-09 67.6 0.9 81 106-186 62-149 (176)
423 3jr1_A Putative fructosamine-3 97.0 0.0024 8.2E-08 65.2 10.4 136 390-532 42-231 (312)
424 2pyw_A Uncharacterized protein 97.0 0.0023 8E-08 68.3 10.4 75 508-583 233-312 (420)
425 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.3E-08 56.5 6.8 37 129-165 32-68 (130)
426 1zyl_A Hypothetical protein YI 96.7 0.01 3.5E-07 60.7 12.4 141 391-537 33-223 (328)
427 1pgv_A TMD-1, tropomodulin TMD 96.6 0.0003 1E-08 66.4 0.0 85 102-186 38-136 (197)
428 3dxq_A Choline/ethanolamine ki 96.6 0.0054 1.8E-07 62.2 9.2 137 390-537 24-202 (301)
429 2ppq_A HSK, HK, homoserine kin 96.5 0.008 2.7E-07 61.4 9.7 142 390-536 28-216 (322)
430 3feg_A Choline/ethanolamine ki 96.3 0.0084 2.9E-07 62.9 8.6 140 390-536 56-253 (379)
431 3e4g_A ATP synthase subunit S, 96.2 0.001 3.6E-08 61.5 0.9 82 128-209 61-150 (176)
432 3csv_A Aminoglycoside phosphot 96.1 0.022 7.5E-07 58.5 10.6 31 508-538 184-218 (333)
433 1nw1_A Choline kinase (49.2 KD 96.0 0.022 7.6E-07 60.9 10.2 71 390-468 79-158 (429)
434 4gt6_A Cell surface protein; l 95.8 0.023 7.8E-07 59.9 9.0 108 98-210 258-369 (394)
435 2yle_A Protein spire homolog 1 95.6 0.065 2.2E-06 50.9 10.4 100 466-582 32-131 (229)
436 4gt6_A Cell surface protein; l 95.6 0.042 1.4E-06 57.9 10.1 81 123-208 260-344 (394)
437 1pgv_A TMD-1, tropomodulin TMD 95.5 0.0044 1.5E-07 58.4 2.1 84 125-208 38-136 (197)
438 2qg7_A Ethanolamine kinase PV0 95.3 0.095 3.2E-06 56.4 11.9 73 390-469 114-188 (458)
439 3c5i_A Choline kinase; choline 94.9 0.11 3.6E-06 54.2 10.6 72 390-468 39-120 (369)
440 2l2t_A Receptor tyrosine-prote 94.7 0.021 7.2E-07 39.0 2.9 26 292-317 12-38 (44)
441 4h09_A Hypothetical leucine ri 94.7 0.067 2.3E-06 55.8 8.5 103 100-206 212-318 (379)
442 2ks1_B Epidermal growth factor 94.7 0.047 1.6E-06 37.4 4.6 27 292-318 13-40 (44)
443 4fs7_A Uncharacterized protein 94.6 0.095 3.3E-06 55.1 9.5 98 81-184 231-328 (394)
444 4h09_A Hypothetical leucine ri 94.6 0.088 3E-06 54.9 9.1 120 81-206 218-341 (379)
445 2k1k_A Ephrin type-A receptor 94.3 0.027 9.1E-07 37.4 2.7 32 285-316 6-37 (38)
446 2jwa_A Receptor tyrosine-prote 94.3 0.047 1.6E-06 37.2 3.8 28 290-317 12-39 (44)
447 4fs7_A Uncharacterized protein 93.9 0.081 2.8E-06 55.6 7.0 120 81-208 254-376 (394)
448 3i1a_A Spectinomycin phosphotr 93.8 0.17 5.8E-06 52.0 9.1 30 508-537 207-236 (339)
449 3f2s_A CK, chetk-alpha, cholin 92.0 0.25 8.7E-06 51.9 7.3 142 391-536 59-279 (401)
450 3mes_A Choline kinase; malaria 89.1 2.8 9.7E-05 44.2 12.3 73 390-469 76-157 (424)
451 3cxl_A N-chimerin; SH2, RHO-GA 87.0 0.075 2.6E-06 57.3 -1.6 60 390-452 148-214 (463)
452 4ano_A ESSB; membrane protein, 78.3 4.4 0.00015 38.3 7.0 114 440-588 48-163 (219)
453 4ann_A ESSB; membrane protein, 77.9 2.7 9.3E-05 39.7 5.4 115 440-588 43-158 (215)
454 2k9y_A Ephrin type-A receptor 65.7 0.95 3.2E-05 30.4 -0.6 8 293-300 17-24 (41)
455 2l34_A TYRO protein tyrosine k 60.8 3.9 0.00013 26.0 1.6 26 289-314 6-31 (33)
456 1iij_A ERBB-2 receptor protein 58.1 2.1 7.1E-05 27.5 -0.0 7 292-298 10-16 (35)
457 2l8s_A Integrin alpha-1; trans 52.0 11 0.00039 26.7 2.9 27 292-318 13-39 (54)
458 3g15_A CK, chetk-alpha, cholin 48.7 6.9 0.00024 40.8 2.1 29 509-537 246-280 (401)
459 2knc_A Integrin alpha-IIB; tra 42.7 17 0.00057 25.9 2.6 20 290-309 13-33 (54)
460 2l2t_A Receptor tyrosine-prote 42.7 33 0.0011 23.3 3.9 31 292-322 9-40 (44)
461 2k9y_A Ephrin type-A receptor 39.7 15 0.00052 24.3 2.0 16 292-307 12-27 (41)
462 2jwa_A Receptor tyrosine-prote 33.8 48 0.0016 22.5 3.6 27 295-321 14-40 (44)
463 2klu_A T-cell surface glycopro 32.7 37 0.0013 25.0 3.1 6 306-311 24-29 (70)
464 2knc_B Integrin beta-3; transm 31.2 38 0.0013 26.2 3.3 24 292-315 10-33 (79)
465 2ks1_B Epidermal growth factor 30.3 56 0.0019 22.1 3.5 31 292-322 10-41 (44)
466 2l9u_A Receptor tyrosine-prote 30.0 68 0.0023 20.2 3.5 20 295-314 12-31 (40)
467 2llm_A Amyloid beta A4 protein 30.7 15 0.00053 24.5 0.0 15 289-303 16-30 (43)
468 3ox7_P MH027; urokinase-type p 24.0 18 0.00063 19.8 0.2 9 68-76 6-14 (23)
469 2l6w_A Beta-type platelet-deri 28.8 17 0.0006 23.7 0.0 6 290-295 9-14 (39)
470 1q55_A EP-cadherin, C-cadherin 22.8 18 0.00061 42.0 0.0 27 288-314 703-729 (880)
471 2lz0_A Uncharacterized protein 21.9 1.7E+02 0.0057 23.5 5.8 16 98-113 13-28 (100)
472 1afo_A Glycophorin A; integral 20.6 93 0.0032 20.3 3.0 13 292-304 12-24 (40)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-55 Score=449.62 Aligned_cols=254 Identities=22% Similarity=0.392 Sum_probs=206.4
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|++++ .||||+++.........+.|.+|+++|++++|||||+++|+|.+ +..+||||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 5789999999999998764 59999997655433456789999999999999999999999864 57899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC----CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL----QD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~----~~ 544 (664)
|.++|+. ....++|.++..|+.|||+||+|||++ +||||||||+||||++++++||+|||+|+...... ..
T Consensus 118 L~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 118 LYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp HHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred HHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 9999974 235699999999999999999999998 99999999999999999999999999998754321 23
Q ss_pred CCCCCCcccCcccccc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC---CchhHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD---GAEDERLGMLL 619 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~--~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 619 (664)
...||+.|||||++.. ...++.|+|||||||+||||+||+.||.... ....+...+....... ..+...+..+.
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 271 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-NRDQIIFMVGRGYASPDLSKLYKNCPKAMK 271 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHTTCCCCCSTTSCTTSCHHHH
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-hHHHHHHHHhcCCCCCCcccccccchHHHH
Confidence 4579999999999853 3458999999999999999999999997642 2223333333322221 12344566799
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 620 EVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
+++.+||+.+|++||||.||++.|+.++....
T Consensus 272 ~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 272 RLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp HHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999876543
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7e-55 Score=451.77 Aligned_cols=253 Identities=22% Similarity=0.338 Sum_probs=212.1
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||+||+|.+. +++.||||+++... .....+.|.+|+.++++++|||||+++|+|.+.+..+||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999873 46899999997543 23456889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEee
Q 006031 463 YQPNGSLFSLIHGSKS-----------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLAD 531 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~D 531 (664)
||++|+|.++|+.... .....++|.++++|+.|||+||+|||+. +||||||||+||||++++++||+|
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECC
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCCEEECC
Confidence 9999999999964321 1134699999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhcc
Q 006031 532 YCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARE 606 (664)
Q Consensus 532 fGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 606 (664)
||+++...... .....||++|||||++. ...++.++|||||||+||||+| |+.||.+. ...++...+.....
T Consensus 189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~i~~~~~ 265 (308)
T 4gt4_A 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEMIRNRQV 265 (308)
T ss_dssp SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHHHHTTCC
T ss_pred cccceeccCCCceeEecccccCCcccCHHHHh-CCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC
Confidence 99998654322 23356899999999987 6789999999999999999999 89999764 34566665554332
Q ss_pred CCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 006031 607 DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647 (664)
Q Consensus 607 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 647 (664)
. +.++..+..+.+++.+||+.||++||||+||++.|+.+.
T Consensus 266 ~-~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 266 L-PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp C-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred C-CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 234455667999999999999999999999999998764
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-54 Score=452.28 Aligned_cols=255 Identities=23% Similarity=0.372 Sum_probs=207.9
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.++||+|+||+||+|++. +++.||||+++.... ...+.|.+|+++|++++|||||+++|+|.+.+..+||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 468999999999999864 478999999975432 345789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeec
Q 006031 463 YQPNGSLFSLIHGSKS----------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~Df 532 (664)
||++|+|.++++.... ....+++|.+++.|+.|||+||+|||+. +||||||||+||||++++.+||+||
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki~DF 202 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDF 202 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEEccc
Confidence 9999999999975321 1235799999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccC
Q 006031 533 CLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607 (664)
Q Consensus 533 Gla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 607 (664)
|+++...... .....||+.|||||++. ...++.++|||||||+||||+| |+.||... ...++...+......
T Consensus 203 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~-~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~g~~~ 279 (329)
T 4aoj_A 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQGREL 279 (329)
T ss_dssp C----------------CCCCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHHHHHHTCCC
T ss_pred ccceeccCCCcceecCcccccccccChhhhc-CCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCC
Confidence 9998754332 12356899999999987 6789999999999999999999 99999763 344555555443322
Q ss_pred CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 608 DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 608 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..+...+..+.+++.+||+.||++||||.||++.|+.+.+..
T Consensus 280 -~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 280 -ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp -CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred -CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 233345567999999999999999999999999999997653
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.7e-55 Score=450.50 Aligned_cols=255 Identities=22% Similarity=0.381 Sum_probs=211.8
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||+||+|.+. ++..||||+++.... ...+.|.+|+++|++++|||||+++|+|.+.+..+||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh--HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 468999999999999864 478899999975432 346789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 463 YQPNGSLFSLIHGSK--------STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
||++|+|.++|+... ......++|.++++|+.|||+||+|||++ +||||||||+||||++++.+||+|||+
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECCccc
Confidence 999999999997532 12345799999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCC
Q 006031 535 TALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDG 609 (664)
Q Consensus 535 a~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 609 (664)
|+....... ....||+.|||||++. ...++.|+|||||||++|||+| |+.||... ...++...+...... .
T Consensus 175 a~~~~~~~~~~~~~~~~gt~~ymAPE~~~-~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~~~~~-~ 250 (299)
T 4asz_A 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQGRVL-Q 250 (299)
T ss_dssp HHHHTGGGCEEETTTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHHTCCC-C
T ss_pred ceecCCCCceeecCceecChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCC-C
Confidence 986544321 2234789999999997 6789999999999999999999 99999763 344555555443322 2
Q ss_pred chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 610 AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 610 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.+...+..+.+++.+||+.||++||||+||++.|+++....
T Consensus 251 ~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 251 RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 23345567999999999999999999999999999987653
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2e-52 Score=428.57 Aligned_cols=243 Identities=21% Similarity=0.352 Sum_probs=201.6
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec----CCceEEEEecC
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA----KEERLLIYDYQ 464 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lV~e~~ 464 (664)
++||+|+||+||+|... ++..||+|++..........+.|.+|++++++++|||||+++++|.+ ++..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 56999999999999964 58899999997665544456789999999999999999999999865 34579999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeCC-CCCeEEeeccccccccCC
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLGP-DFEACLADYCLTALTADS 541 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~~-~~~~ki~DfGla~~~~~~ 541 (664)
++|+|.++++. ...+++..+..|+.||+.||+|||++ + ||||||||+||||+. ++.+||+|||+|+.....
T Consensus 112 ~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 112 TSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999963 35699999999999999999999997 6 999999999999984 799999999999876665
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
......||+.|||||++. ..++.++|||||||++|||+||+.||.... ....+...+.....+...+...+..+.++
T Consensus 186 ~~~~~~GTp~YmAPE~~~--~~y~~~~DiwSlGvilyelltg~~Pf~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp SBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred ccCCcccCccccCHHHcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-cHHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence 555678999999999885 468999999999999999999999997532 22344444433322222222334568999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.||++|||+.|+++
T Consensus 263 i~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhHCcCHHHHhc
Confidence 99999999999999999875
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.2e-52 Score=437.18 Aligned_cols=261 Identities=22% Similarity=0.298 Sum_probs=210.5
Q ss_pred HhccccccCceeEEEEEEcC------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCC-CCcccceEEEecC-CceEE
Q 006031 388 SAELLGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH-PNLVPLRAYFQAK-EERLL 459 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~l 459 (664)
..+.||+|+||+||+|.+.+ ++.||||+++.... ....+.|.+|+++|.+++| ||||+++|+|.+. +..++
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 35789999999999998643 36899999975432 1235679999999999965 8999999999764 56899
Q ss_pred EEecCCCCCHHHHhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeE
Q 006031 460 IYDYQPNGSLFSLIHGSKS-----------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC 528 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~k 528 (664)
|||||++|+|.++|+.... .....++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+|
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceeeCCCCCEE
Confidence 9999999999999975321 1235689999999999999999999999 999999999999999999999
Q ss_pred EeeccccccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHh
Q 006031 529 LADYCLTALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRS 603 (664)
Q Consensus 529 i~DfGla~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 603 (664)
|+|||+|+....... ....||+.|||||++. ...++.++|||||||+||||+| |+.||.+... ...+...+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~-~~~~~~~i~~ 303 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLKE 303 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHHHHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHh-cCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH-HHHHHHHHHc
Confidence 999999987644321 2345789999999997 6789999999999999999998 9999976432 2344444443
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCC
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 653 (664)
.... ..++..+.++.+++.+||+.||++||||.||++.|+++.+...++
T Consensus 304 g~~~-~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~q 352 (353)
T 4ase_A 304 GTRM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352 (353)
T ss_dssp TCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC--
T ss_pred CCCC-CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhCC
Confidence 3222 223334566899999999999999999999999999987665543
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-51 Score=425.36 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=196.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC----ceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE----ERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lV~e~~ 464 (664)
.+.||+|+||+||+|++ +|+.||||+++.... ....++.|+..+.+++|||||+++|+|.+.+ ..+||||||
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 46899999999999998 578999999964321 2334456677778899999999999998754 579999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA-------WRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
++|+|.++++. ..++|..+.+|+.|+|+||+|||++ ++||||||||+|||||+++++||+|||+++.
T Consensus 84 ~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 84 EHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp TTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999963 3589999999999999999999974 3899999999999999999999999999987
Q ss_pred ccCCCC------CCCCCCCcccCccccccCC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCC----------C---
Q 006031 538 TADSLQ------DDDPDNLLYKAPETRNASH-----QATSKSDVYSFGVLLLELLTGKPPSQHSFL----------V--- 593 (664)
Q Consensus 538 ~~~~~~------~~~~~~~~y~aPE~~~~~~-----~~~~ksDVwSfGvvl~elltG~~P~~~~~~----------~--- 593 (664)
...... ....||+.|||||++.+.. .++.|+|||||||++|||+||++|+..... .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 644321 2346999999999986321 357799999999999999999887643211 1
Q ss_pred hhhHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 594 PNEMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 594 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
...+...+........ ...+.+..+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1122222221111111 1235567789999999999999999999999999998754
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.9e-51 Score=427.06 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=201.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+.+..|||||||++|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 45799999999999996 4589999999975433 246999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC-CeEEeeccccccccCCC----
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSL---- 542 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~~---- 542 (664)
+|.++++. ...+++..+..|+.||+.||+|||++ +||||||||+||||+.++ .+||+|||+|+......
T Consensus 136 ~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 136 SLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999963 35699999999999999999999999 999999999999999987 69999999998764421
Q ss_pred ---CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHH
Q 006031 543 ---QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL 619 (664)
Q Consensus 543 ---~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 619 (664)
....+||+.|||||++. +..++.++|||||||++|||+||+.||...... .-+.............+...+..+.
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTA 287 (336)
T ss_dssp ----CCCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred eecCCccccCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHH
Confidence 12246999999999997 677899999999999999999999999764322 1222222221111112334456689
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 620 EVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
+++.+||+.||++|||+.|+++.|.+....
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999998776443
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.7e-51 Score=426.79 Aligned_cols=241 Identities=21% Similarity=0.309 Sum_probs=205.1
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+..|||||||++|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 367999999999999964 689999999975443 34567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~~~ 545 (664)
+|.++++. ..+++..+..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+..... ....
T Consensus 157 ~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 157 ALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp EHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred cHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999963 3589999999999999999999999 9999999999999999999999999999876543 2345
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhcc-CCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE-DDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~ 624 (664)
..||+.|||||++. ...|+.++|||||||++|||++|+.||... ...++...+..... ........+..+.+++.+
T Consensus 230 ~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 230 LVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 68999999999986 677899999999999999999999999753 33344444433222 222334455678999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~ 641 (664)
||+.||++|||+.|+++
T Consensus 307 ~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 307 LLVRDPAQRATAAELLK 323 (346)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999999976
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-51 Score=430.34 Aligned_cols=245 Identities=20% Similarity=0.320 Sum_probs=199.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|+. .+|+.||||++..........+.+.+|+++|++++|||||++++++.+++..||||||+++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 46899999999999996 46899999999766554445678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.++++.. ....+++.....|+.||+.||+|||++ +||||||||+||||++++.+||+|||+|+...... ...
T Consensus 109 ~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 184 (350)
T 4b9d_A 109 DLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184 (350)
T ss_dssp BHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHH
T ss_pred cHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccc
Confidence 999999642 335678999999999999999999999 99999999999999999999999999998765432 123
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|||||.+. +..++.++|||||||++|||+||+.||... ...++...+...... ..+...+..+.+++.+|
T Consensus 185 ~~GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~~-~~~~~~s~~~~~li~~~ 260 (350)
T 4b9d_A 185 CIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFP-PVSLHYSYDLRSLVSQL 260 (350)
T ss_dssp HHSCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHH
T ss_pred cCCCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCC-CCCccCCHHHHHHHHHH
Confidence 46999999999987 677899999999999999999999999763 233333333222211 12233455689999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.||++|||+.|+++
T Consensus 261 L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 261 FKRNPRDRPSVNSILE 276 (350)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred ccCChhHCcCHHHHhc
Confidence 9999999999999976
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-49 Score=404.40 Aligned_cols=242 Identities=21% Similarity=0.316 Sum_probs=189.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|.. .+++.||+|+++..... ....+.+.+|++++++++|||||++++++.+.+..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 46899999999999995 56899999999765432 234567999999999999999999999999999999999999 6
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
|+|.+++.. ...+++.....++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+...... ...
T Consensus 97 g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 170 (275)
T 3hyh_A 97 NELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 170 (275)
T ss_dssp EEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCC
Confidence 899999953 35699999999999999999999999 99999999999999999999999999998765432 334
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|||||.+.+...++.++||||+||++|||+||+.||... ...++.+.+...... .+...+..+.+++.+|
T Consensus 171 ~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~ 246 (275)
T 3hyh_A 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYT--LPKFLSPGAAGLIKRM 246 (275)
T ss_dssp ----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC--CCTTSCHHHHHHHHHH
T ss_pred eeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHH
Confidence 679999999999975445578999999999999999999999753 233333333322221 2233445688999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.||++|||+.|+++
T Consensus 247 L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 247 LIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCSSGGGSCCHHHHHH
T ss_pred ccCChhHCcCHHHHHc
Confidence 9999999999999986
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.7e-50 Score=427.33 Aligned_cols=241 Identities=21% Similarity=0.314 Sum_probs=204.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|+++|++++|||||+++++|.+.+..|||||||++|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG 233 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCC
Confidence 467999999999999964 689999999975543 34567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.++++. ..+++..+..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+...... ...
T Consensus 234 ~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 234 ALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp EHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred cHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999953 3589999999999999999999999 99999999999999999999999999998765432 334
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC-CCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED-DGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~ 624 (664)
.+||+.|||||++. ...|+.++|||||||++|||++|+.||.+. ...++...+...... ..........+.+|+.+
T Consensus 307 ~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence 67999999999987 677899999999999999999999999753 233444444333221 12233345568999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~ 641 (664)
||+.||++|||+.|+++
T Consensus 384 ~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 384 LLVRDPAQRATAAELLK 400 (423)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999999976
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.7e-50 Score=413.07 Aligned_cols=242 Identities=19% Similarity=0.270 Sum_probs=204.2
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCC
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
..+.||+|+||+||+|+. .+++.||||++.+... .....+.+.+|+++|++++|||||++++++.+++..|+||||++
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 357899999999999995 5689999999975432 23456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--- 542 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--- 542 (664)
+|+|.+++.. ...+++.....|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 116 gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 116 NGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp TEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence 9999999953 35699999999999999999999999 99999999999999999999999999998764332
Q ss_pred -CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 543 -QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 543 -~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
....+||+.|||||++. +..++.++||||+||++|||+||+.||... ...++...+.... ...+.....++.++
T Consensus 190 ~~~~~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~dl 264 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEGLIFAKIIKLE--YDFPEKFFPKARDL 264 (311)
T ss_dssp CBCCCCSCGGGCCHHHHH-HSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTC--CCCCTTCCHHHHHH
T ss_pred cccCcccCcccCCHHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCC--CCCCcccCHHHHHH
Confidence 23457999999999997 677899999999999999999999999753 2334443333222 12233345568999
Q ss_pred HHHcccCCCCCCCCHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVL 640 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~ 640 (664)
+.+||+.||++|||+.|+.
T Consensus 265 i~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 265 VEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHSCSSGGGSTTSGGGT
T ss_pred HHHHccCCHhHCcChHHHc
Confidence 9999999999999999864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.8e-50 Score=412.94 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=195.5
Q ss_pred HhccccccCceeEEEEEEc----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 388 SAELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
..+.||+|+||+||+|+.. .++.||+|+++...........+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence 3578999999999999852 468899999976554334445688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-- 541 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 541 (664)
+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 108 ~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 108 LRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp CTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred CCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 999999999963 35699999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
......||+.|||||.+. ...++.++||||+||++|||+||+.||.+. ...++...+..... ..+...+..+.++
T Consensus 182 ~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~l 256 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQGK--DRKETMTMILKAKL--GMPQFLSPEAQSL 256 (304)
T ss_dssp CCCSCCCCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHH
T ss_pred cccccccCcccCCHHHhc-cCCCCCCCcccchHHHHHHHHhCCCCCCCc--CHHHHHHHHHcCCC--CCCCcCCHHHHHH
Confidence 233467999999999987 677899999999999999999999999763 23344443332222 2233345668999
Q ss_pred HHHcccCCCCCCCCH-----HHHHH
Q 006031 622 AIACNSASPEQRPTM-----WQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~-----~ev~~ 641 (664)
+.+||+.||++|||+ +|+++
T Consensus 257 i~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 257 LRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHHcccCHHHCCCCCcCCHHHHHc
Confidence 999999999999984 56653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.3e-48 Score=398.46 Aligned_cols=241 Identities=20% Similarity=0.322 Sum_probs=184.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC------------
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE------------ 455 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------------ 455 (664)
.+.||+|+||+||+|+. .+++.||||+++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 46899999999999996 4688999999864432 123467899999999999999999999987654
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecccc
Q 006031 456 ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT 535 (664)
Q Consensus 456 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 535 (664)
..|+||||+++|+|.++++... .....++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCccc
Confidence 3689999999999999997432 223456777899999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC--------------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH
Q 006031 536 ALTADSLQ--------------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV 601 (664)
Q Consensus 536 ~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~ 601 (664)
+....... ....||+.|||||.+. +..++.++|||||||++|||++ ||.. ..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~----~~~~~~~~ 237 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFST----QMERVRTL 237 (299)
T ss_dssp --------------------------CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCC----ccHHHHHH
Confidence 87644221 1246999999999987 6779999999999999999997 6643 22222222
Q ss_pred HhhccCC--CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 602 RSAREDD--GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 602 ~~~~~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
....... ...........+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2111111 122333445778999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=398.90 Aligned_cols=244 Identities=18% Similarity=0.254 Sum_probs=196.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec------CCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA------KEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~~~~lV~ 461 (664)
.+.||+|+||+||+|.. .+|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 46899999999999996 568999999997654433345678899999999999999999998753 35789999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
|||+ |+|.+++. ....+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 139 E~~~-g~L~~~i~-----~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 139 DLME-SDLHQIIH-----SSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp ECCS-EEHHHHHT-----SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred eCCC-CCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence 9995 68999995 345799999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhc-cCC------
Q 006031 542 ------LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAR-EDD------ 608 (664)
Q Consensus 542 ------~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~------ 608 (664)
......||+.|||||++.+...++.++||||+||++|||++|++||.+.. ..+....+.... ...
T Consensus 212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGGGTC-
T ss_pred ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChHHhhh
Confidence 22345799999999998755678999999999999999999999997632 222222221111 100
Q ss_pred -----------------C-ch----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 -----------------G-AE----DERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 -----------------~-~~----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
. .. ......+.+|+.+||+.||++|||+.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 00 112345789999999999999999999886
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8e-45 Score=385.28 Aligned_cols=240 Identities=19% Similarity=0.263 Sum_probs=191.2
Q ss_pred hccccccCceeEEEEEEc----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|+.+ .++.||+|++... .....+.+|+++++.+ +|||||++++++.+.+..|+||||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~ 101 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY 101 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence 468999999999999853 4688999998643 2356788999999988 699999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC-CCeEEeeccccccccCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD-FEACLADYCLTALTADSL 542 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~-~~~ki~DfGla~~~~~~~ 542 (664)
+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...+..
T Consensus 102 ~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 102 LEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred CCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999993 388999999999999999999999 99999999999999877 799999999997543221
Q ss_pred ------------------------------CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 006031 543 ------------------------------QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592 (664)
Q Consensus 543 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~ 592 (664)
.....||+.|||||++.+...++.++||||+||++|||+||+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 12246999999999987556789999999999999999999999965432
Q ss_pred ChhhHHHHHHhh----------------------------------ccCC-----------------CchhHHHHHHHHH
Q 006031 593 VPNEMMNWVRSA----------------------------------REDD-----------------GAEDERLGMLLEV 621 (664)
Q Consensus 593 ~~~~~~~~~~~~----------------------------------~~~~-----------------~~~~~~~~~l~~l 621 (664)
....+....... .... ......+.++.+|
T Consensus 253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence 211211111100 0000 0011123457899
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+|++.||++|||++|+++
T Consensus 333 l~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHCcCChhHCcCHHHHhc
Confidence 99999999999999999875
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.4e-44 Score=403.79 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=200.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcccc-CCcHHHH---HHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA-GTSNEMY---EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.++||+|+||+||+|+.. +|+.||+|++++.... ....... +.++.+++.++|||||++++++.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 468999999999999964 6899999999754321 1223333 3446778889999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
++||+|.++|.. ...+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.......
T Consensus 274 ~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~ 347 (689)
T 3v5w_A 274 MNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347 (689)
T ss_dssp CCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred CCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence 999999999953 35699999999999999999999999 999999999999999999999999999998777666
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-hhhHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-PNEMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
...+||+.|||||++..+..|+.++||||+||++|||++|++||...... ..++...+... ....+......+.+++
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--~~~~p~~~S~~a~dLI 425 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPELRSLL 425 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHH
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC--CCCCCccCCHHHHHHH
Confidence 66789999999999864557899999999999999999999999753222 12233222222 1222334456689999
Q ss_pred HHcccCCCCCCCC-----HHHHHH
Q 006031 623 IACNSASPEQRPT-----MWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt-----~~ev~~ 641 (664)
.+||+.||++|++ +.||.+
T Consensus 426 ~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 426 EGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHccCCHhHCCCCCCCCHHHHhc
Confidence 9999999999998 677754
No 19
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.5e-43 Score=369.11 Aligned_cols=259 Identities=27% Similarity=0.400 Sum_probs=203.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|.. ++..||||++..........+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 46899999999999987 57789999997655433445678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~ 544 (664)
|.++++... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 121 L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 197 (309)
T 3p86_A 121 LYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197 (309)
T ss_dssp HHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC-------------
T ss_pred HHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccc
Confidence 999996421 123489999999999999999999998 8 9999999999999999999999999998654432 22
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...||+.|+|||.+. ...++.++|||||||++|||+||+.||... ...+....+.........+...+..+.+++.+
T Consensus 198 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 274 (309)
T 3p86_A 198 SAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274 (309)
T ss_dssp ----CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred cCCCCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence 356899999999987 567899999999999999999999999753 23344444433333333334445668999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhccccCCC
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVLMED 654 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~ 654 (664)
||+.+|++|||+.|+++.|+.+.......+
T Consensus 275 ~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~ 304 (309)
T 3p86_A 275 CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304 (309)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred HccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999987654433
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.9e-44 Score=401.06 Aligned_cols=243 Identities=24% Similarity=0.318 Sum_probs=203.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+|+.||+|.+..... ...+.+.+|+++|+.++|||||++++++.+.+..|+|||||++|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~--~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE--SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccch--hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 56899999999999996 4689999999865433 34567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC--CCeEEeeccccccccCCC-CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD--FEACLADYCLTALTADSL-QD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~--~~~ki~DfGla~~~~~~~-~~ 544 (664)
+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++...... ..
T Consensus 240 ~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 240 ELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp BHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred cHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999952 335699999999999999999999999 99999999999999854 899999999998765432 23
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~ 622 (664)
...||+.|||||++. +..++.++||||+||++|||++|+.||.+. ...+....+....... .........+.+|+
T Consensus 315 ~~~GT~~y~APEv~~-~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli 391 (573)
T 3uto_A 315 VTTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391 (573)
T ss_dssp EECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred eeEECccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence 457999999999997 677899999999999999999999999763 2334444333322211 12233455688999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+||+.||++|||+.|+++
T Consensus 392 ~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 392 RKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999976
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.5e-42 Score=363.40 Aligned_cols=256 Identities=30% Similarity=0.481 Sum_probs=212.5
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 121 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence 467999999999999988899999999865432 456789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC----CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL----QD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~----~~ 544 (664)
|.+++.... .....++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 122 L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 122 LKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp TGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 999996432 2334699999999999999999999998 99999999999999999999999999997644322 12
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-hhHHHHHHhhccC------------CCch
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP-NEMMNWVRSARED------------DGAE 611 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~-~~~~~~~~~~~~~------------~~~~ 611 (664)
...|++.|+|||.+. ...++.++|||||||++|||+||+.||....... .....|....... ....
T Consensus 200 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278 (321)
T ss_dssp CCEEETTTCCHHHHH-HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSC
T ss_pred ccCCCccccCHHHhc-CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccC
Confidence 234789999999986 5678999999999999999999999997643322 2344443221111 1134
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 612 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
.+.+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 56778899999999999999999999999999988653
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=359.57 Aligned_cols=249 Identities=22% Similarity=0.399 Sum_probs=205.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 92 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE--ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence 478999999999999964 588999998854322 34678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCC---
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--- 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~--- 544 (664)
+|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 93 ~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 93 TLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp BHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred cHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999974 235699999999999999999999999 9999999999999999999999999999865433211
Q ss_pred -------------CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChh----hHHHHHHhhccC
Q 006031 545 -------------DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPN----EMMNWVRSARED 607 (664)
Q Consensus 545 -------------~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~----~~~~~~~~~~~~ 607 (664)
...||+.|+|||.+. ...++.++||||||+++|||++|..|+........ ...........
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP- 245 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC-
T ss_pred cccccccccccccccCCCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC-
Confidence 345899999999987 67789999999999999999999999875432211 22222222111
Q ss_pred CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 608 DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 608 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
...+..+.+++.+||+.+|++|||+.|+++.|++++...
T Consensus 246 ----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 246 ----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp ----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 122234889999999999999999999999999997654
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-42 Score=371.94 Aligned_cols=257 Identities=22% Similarity=0.324 Sum_probs=209.9
Q ss_pred hccccccCceeEEEEEEc--------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEE
Q 006031 389 AELLGKGSLGTTYKAVLD--------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 459 (664)
.+.||+|+||.||+|... ++..||||+++.... ....+.+.+|+++++++ +||||++++++|.+.+..++
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 568999999999999852 456899999975422 22346789999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeE
Q 006031 460 IYDYQPNGSLFSLIHGSKS-----------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC 528 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~k 528 (664)
||||+++|+|.++++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~k 243 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMK 243 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECCCCCEE
Confidence 9999999999999975321 1234689999999999999999999999 999999999999999999999
Q ss_pred EeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHh
Q 006031 529 LADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRS 603 (664)
Q Consensus 529 i~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 603 (664)
|+|||+++...... .....+++.|+|||++. ...++.++|||||||++|||+| |+.||... ...++...+..
T Consensus 244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~ 320 (370)
T 2psq_A 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKE 320 (370)
T ss_dssp ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH-TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHT
T ss_pred EccccCCcccCcccceecccCCCcccceECHhHhc-CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhc
Confidence 99999998654432 12234678899999987 6778999999999999999999 99999764 23344444433
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
.... ..+...+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 321 ~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 321 GHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp TCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 3222 2223345568999999999999999999999999999876543
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-42 Score=351.00 Aligned_cols=249 Identities=23% Similarity=0.379 Sum_probs=209.4
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCc
Confidence 468999999999999998899999999975433 46789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~~ 545 (664)
|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 92 L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 92 LSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999963 334689999999999999999999999 99999999999999999999999999998654432 223
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..+++.|+|||.+. ...++.++||||||+++|||++ |+.||... ...++...+....... .+...+..+.+++.+
T Consensus 167 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~ 242 (269)
T 4hcu_A 167 TKFPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY-KPRLASTHVYQIMNH 242 (269)
T ss_dssp TTCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC-CCTTSCHHHHHHHHH
T ss_pred cccccccCCHHHhc-CCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhcCccCC-CCCcCCHHHHHHHHH
Confidence 45677899999986 5678999999999999999999 99998753 2333333333322221 122234568999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
||+.+|++|||+.|+++.|+++.+.
T Consensus 243 ~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 243 CWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HccCCcccCcCHHHHHHHHHHHHHc
Confidence 9999999999999999999999765
No 25
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.6e-42 Score=361.25 Aligned_cols=271 Identities=31% Similarity=0.542 Sum_probs=218.8
Q ss_pred ccccCHHHHHHHH-----hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEE
Q 006031 376 AQLYTLDQLMRAS-----AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450 (664)
Q Consensus 376 ~~~~~~~~l~~~~-----~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~ 450 (664)
...+++.++.... .+.||+|+||.||+|...+++.||||++...... .....+.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3456666665543 4689999999999999888999999999764432 223368999999999999999999999
Q ss_pred EecCCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CcccCCCCCCCeEeCCCCCeE
Q 006031 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW--RLVHGNLKSSNVLLGPDFEAC 528 (664)
Q Consensus 451 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~ivHrDlk~~NILl~~~~~~k 528 (664)
+.+.+..++||||+++|+|.++++... .....++|..+..|+.|++.||+|||+.. +|+||||||+|||+++++.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999999997543 23456999999999999999999999863 899999999999999999999
Q ss_pred EeeccccccccCCC---CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCC---CCChhhHHHHHH
Q 006031 529 LADYCLTALTADSL---QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHS---FLVPNEMMNWVR 602 (664)
Q Consensus 529 i~DfGla~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~---~~~~~~~~~~~~ 602 (664)
|+|||+++...... .....||+.|+|||.+. ...++.++|||||||++|||+||+.||+.. ........+|+.
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH-HSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhc-cCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999998764332 22345899999999986 566899999999999999999999999631 112234555554
Q ss_pred hhccCC------------CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 603 SAREDD------------GAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 603 ~~~~~~------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
...... ....+....+.+++.+||+.+|++|||+.||++.|++..-.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 433322 23456678899999999999999999999999999875433
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.4e-43 Score=376.07 Aligned_cols=252 Identities=21% Similarity=0.364 Sum_probs=207.7
Q ss_pred HhccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 388 SAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
..+.||+|+||.||+|... +++.||||.++.... ....+.|.+|++++++++||||++++++|...+..++||||+++
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 196 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCC
Confidence 3578999999999999976 688999999874321 12235688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCC-
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD- 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~- 545 (664)
|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 197 g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 197 GDFLTFLRT----EGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CBHHHHHHH----HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999963 234689999999999999999999999 99999999999999999999999999998654432211
Q ss_pred ---CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 546 ---DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 546 ---~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
..++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.++
T Consensus 272 ~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~l 347 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALN-YGRYSSESDVWSFGILLWETFSLGASPYPNL--SNQQTREFVEKGGRL-PCPELCPDAVFRL 347 (377)
T ss_dssp SSCCEEEGGGSCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--CHHHHHHHHHTTCCC-CCCTTCCHHHHHH
T ss_pred CCCCCCCcCcCCHhHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence 22466799999986 5678999999999999999999 99998753 233444444433222 2223345568999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 622 AIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
+.+||+.+|++|||+.++++.|++++..
T Consensus 348 i~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 348 MEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999764
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=362.31 Aligned_cols=252 Identities=21% Similarity=0.358 Sum_probs=206.0
Q ss_pred hccccccCceeEEEEEEc----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|... .+..||||+++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 478999999999999974 456799999975322 234567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~- 543 (664)
++|+|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 133 ~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 133 ENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp TTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred CCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 99999999963 235699999999999999999999999 999999999999999999999999999987654321
Q ss_pred ----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 544 ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 544 ----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
....+|+.|+|||.+. ...++.++|||||||++|||++ |+.||... ...++...+...... ..+...+..+
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l 283 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRL-PAPMGCPHAL 283 (325)
T ss_dssp CEECC---CCGGGSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCC-CCCTTCCHHH
T ss_pred eeeccCCCCcccccCHhHhc-CCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCC-CCCCCcCHHH
Confidence 1234577899999986 5678999999999999999999 99999753 233444433332221 1223345568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.+++.+||+.+|++|||+.||++.|+++....
T Consensus 284 ~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999987554
No 28
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.9e-42 Score=378.77 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=210.7
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++. .+..++||||+++|+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 46899999999999999989999999997543 35788999999999999999999999986 667899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~~ 545 (664)
|.++++.. ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 269 L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 269 LLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99999632 123588999999999999999999999 99999999999999999999999999998764421 122
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.+++.+
T Consensus 345 ~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~ 420 (454)
T 1qcf_A 345 AKFPIKWTAPEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYRM-PRPENCPEELYNIMMR 420 (454)
T ss_dssp SSSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHH
T ss_pred CcccccccCHHHhc-cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHH
Confidence 34677899999986 5678999999999999999999 99999753 233444444333222 1233445668999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhccccCC
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVLME 653 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 653 (664)
||+.+|++||||.+|++.|+++......+
T Consensus 421 cl~~dp~~RPt~~~i~~~L~~~~~~~~~~ 449 (454)
T 1qcf_A 421 CWKNRPEERPTFEYIQSVLDDFYTATESQ 449 (454)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSSSSCCS
T ss_pred HccCChhHCcCHHHHHHHHHHHHhccccc
Confidence 99999999999999999999997765443
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.5e-42 Score=356.71 Aligned_cols=242 Identities=19% Similarity=0.338 Sum_probs=202.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCC
Confidence 46799999999999984 6788999999865443 45678899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....... ...
T Consensus 103 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 103 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp BHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 99999963 3589999999999999999999999 99999999999999999999999999988665432 234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|+|||.+. ...++.++|||||||++|||+||+.||..... .................+......+.+++.+|
T Consensus 176 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 253 (297)
T 3fxz_A 176 MVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253 (297)
T ss_dssp CCSCGGGCCHHHHH-CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHH
T ss_pred ccCCcCccChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCCCCccccCHHHHHHHHHH
Confidence 56899999999987 66789999999999999999999999975321 11222222222222233444556689999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.||++|||+.|+++
T Consensus 254 l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 254 LEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCSSTTTSCCHHHHTT
T ss_pred ccCChhHCcCHHHHhh
Confidence 9999999999999986
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2e-42 Score=363.52 Aligned_cols=244 Identities=23% Similarity=0.279 Sum_probs=202.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 46899999999999996 67899999999765543344567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC-CCCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDD 546 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-~~~~~ 546 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||++...... .....
T Consensus 100 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 173 (328)
T 3fe3_A 100 EVFDYLVA-----HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173 (328)
T ss_dssp BHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTT
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccc
Confidence 99999953 24589999999999999999999999 9999999999999999999999999999765433 22345
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
.||+.|+|||.+.+....+.++|||||||++|||+||+.||... ...++...+...... .+......+.+++.+||
T Consensus 174 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L 249 (328)
T 3fe3_A 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--NLKELRERVLRGKYR--IPFYMSTDCENLLKRFL 249 (328)
T ss_dssp SSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHC
T ss_pred cCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHC
Confidence 78999999999874444468999999999999999999999763 233333333322221 12223455889999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 006031 627 SASPEQRPTMWQVLKM 642 (664)
Q Consensus 627 ~~~P~~RPt~~ev~~~ 642 (664)
+.||++|||+.|+++.
T Consensus 250 ~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 250 VLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CSSTTTSCCHHHHTTC
T ss_pred CCChhHCcCHHHHhcC
Confidence 9999999999999863
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-41 Score=356.15 Aligned_cols=241 Identities=22% Similarity=0.339 Sum_probs=202.5
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 47999999999999976 689999999875433 456789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDDD 546 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~~ 546 (664)
|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 129 L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (321)
T 2c30_A 129 LTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 201 (321)
T ss_dssp HHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence 9999852 3589999999999999999999999 99999999999999999999999999998765432 2345
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-CchhHHHHHHHHHHHHc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD-GAEDERLGMLLEVAIAC 625 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~C 625 (664)
.||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...+....+....... ......+..+.+++.+|
T Consensus 202 ~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 202 VGTPYWMAPEVIS-RSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp CSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHH
T ss_pred cCCccccCHhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHH
Confidence 6899999999986 667899999999999999999999999753 2333333333322221 22233455689999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 006031 626 NSASPEQRPTMWQVLKM 642 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~~ 642 (664)
|+.||++|||+.|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999863
No 32
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.9e-42 Score=355.44 Aligned_cols=254 Identities=22% Similarity=0.399 Sum_probs=203.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|...+ .+|+|.++.........+.+.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 4689999999999998654 5899988765443344578999999999999999999999875 556899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC----CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~~ 544 (664)
|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 118 L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~ 192 (307)
T 3lb7_A 118 LYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp HHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----------
T ss_pred HHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccccc
Confidence 9999963 345699999999999999999999999 9999999999999999999999999999764321 222
Q ss_pred CCCCCCcccCccccc--cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC---chhHHHHHHH
Q 006031 545 DDPDNLLYKAPETRN--ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG---AEDERLGMLL 619 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~--~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 619 (664)
...||+.|+|||.+. ....++.++|||||||++|||+||+.||..... ...+...+........ .....+..+.
T Consensus 193 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (307)
T 3lb7_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGYASPDLSKLYKNCPKAMK 271 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTCCCCCSTTSCSSSCHHHH
T ss_pred CCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcCCCCcchhhhhcCCcHHHH
Confidence 356899999999874 245678899999999999999999999976432 2233333332222221 1233456689
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 620 EVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
+++.+||+.+|++||++.|+++.|+.+.....
T Consensus 272 ~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 272 RLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp HHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999986653
No 33
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-41 Score=349.30 Aligned_cols=250 Identities=27% Similarity=0.477 Sum_probs=204.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcH-----HHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSN-----EMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~-----~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||+||+|.. .+++.||+|++.......... +.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 46899999999999996 578899999986544322222 67899999999999999999999986554 79999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeCCCCC-----eEEeecccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLGPDFE-----ACLADYCLT 535 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~~~~~-----~ki~DfGla 535 (664)
|+++|+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +||+|||++
T Consensus 102 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 102 FVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp CCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred ecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 9999999998863 345799999999999999999999998 8 999999999999988776 999999999
Q ss_pred ccccCCCCCCCCCCCcccCcccccc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHH
Q 006031 536 ALTADSLQDDDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDER 614 (664)
Q Consensus 536 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (664)
+...... ....+++.|+|||.+.. ...++.++|||||||++|||++|+.||.......................+...
T Consensus 177 ~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 4f0f_A 177 QQSVHSV-SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC 255 (287)
T ss_dssp BCCSSCE-ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTS
T ss_pred ccccccc-cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCccc
Confidence 8654432 23568999999998842 345688999999999999999999999765433333344433333333333445
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006031 615 LGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646 (664)
Q Consensus 615 ~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 646 (664)
+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 256 ~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 256 PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 56799999999999999999999999999874
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.8e-42 Score=360.67 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=200.7
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC----ceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE----ERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lV~e~~ 464 (664)
.++||+|+||+||+|... ++.||||++.... .....+++|+.++++++||||+++++++.... ..++||||+
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~ 104 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecC
Confidence 468999999999999876 6899999996433 23456677899999999999999999998754 369999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccCCCCCCCeEeCCCCCeEEeecccc
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW---------RLVHGNLKSSNVLLGPDFEACLADYCLT 535 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------~ivHrDlk~~NILl~~~~~~ki~DfGla 535 (664)
++|+|.++++. ..++|..+..|+.|++.||+|||+.. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 105 EKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp TTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999963 34899999999999999999999752 8999999999999999999999999999
Q ss_pred ccccCCCC----CCCCCCCcccCccccccC----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC--------------
Q 006031 536 ALTADSLQ----DDDPDNLLYKAPETRNAS----HQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-------------- 593 (664)
Q Consensus 536 ~~~~~~~~----~~~~~~~~y~aPE~~~~~----~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-------------- 593 (664)
+....... ....+|+.|+|||.+.+. ..++.++|||||||++|||+||+.||......
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 76544322 234689999999998642 34566889999999999999999999754221
Q ss_pred hhhHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 594 PNEMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 594 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
..++...+........ .....+..+.+++.+||+.||++|||+.||++.|+++...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112222211111111 1234566799999999999999999999999999998754
No 35
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.8e-42 Score=369.04 Aligned_cols=251 Identities=20% Similarity=0.379 Sum_probs=197.4
Q ss_pred hccccccCceeEEEEEEc----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|... ++..||||+++.... ....+.|.+|++++++++||||+++++++.+.+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 577899999975421 234567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~- 543 (664)
++|+|.++++. ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 129 ENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp TTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999973 235699999999999999999999999 999999999999999999999999999987654321
Q ss_pred ----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 544 ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 544 ----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
....++..|+|||++. ...++.++|||||||++|||++ |+.||... ...++...+....... .+...+..+
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~~~-~~~~~~~~l 279 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRLP-PPMDCPAAL 279 (373)
T ss_dssp ----------CTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEECC-CCTTCBHHH
T ss_pred ceeccCCCcCCCccChhhhc-cCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCC-CCccccHHH
Confidence 1123467899999987 6778999999999999999998 99999753 2334444443332221 222344568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
.+++.+||+.+|++||+|.||++.|+++...
T Consensus 280 ~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 280 YQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998643
No 36
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.5e-42 Score=348.32 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=203.3
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC--CceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK--EERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +..||+|+++.........+.+.+|++++++++||||+++++++.+. +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 468999999999999985 78899999976554334457799999999999999999999999877 778999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeCCCCCeEEeeccccccccCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 544 (664)
|+|.++++.. ....+++..+..|+.|++.||+|||+. + |+||||||+||+++.++.++++|||++..... .
T Consensus 94 ~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~---~ 166 (271)
T 3kmu_A 94 GSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---P 166 (271)
T ss_dssp CBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC---T
T ss_pred CcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc---c
Confidence 9999999742 233689999999999999999999998 7 99999999999999999999999988754322 2
Q ss_pred CCCCCCcccCccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASH--QATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~--~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
...+|+.|+|||.+.+.. .++.++||||||+++|||+||+.||... ...+....+.........+...+..+.+++
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 244 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVALEGLRPTIPPGISPHVSKLM 244 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--CHHHHHHHHHHSCCCCCCCTTCCHHHHHHH
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--ChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 346789999999986322 2334899999999999999999999753 222222222222222222334456689999
Q ss_pred HHcccCCCCCCCCHHHHHHHHHhhhc
Q 006031 623 IACNSASPEQRPTMWQVLKMLQEIKG 648 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~~L~~i~~ 648 (664)
.+||+.+|++|||+.|+++.|+++.+
T Consensus 245 ~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 245 KICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999875
No 37
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.6e-42 Score=349.96 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=206.8
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...++..||+|+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCc
Confidence 467999999999999999999999999975443 46779999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---DD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---~~ 545 (664)
|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 90 L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 90 LLNYLRS----HGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHH----HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9999963 234689999999999999999999999 999999999999999999999999999986654322 22
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...+....+...... ..+...+..+.+++.+
T Consensus 165 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 240 (268)
T 3sxs_A 165 TKFPVKWSAPEVFH-YFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRL-YRPHLASDTIYQIMYS 240 (268)
T ss_dssp CCCCGGGCCHHHHH-HSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCC-CCCTTSCHHHHHHHHH
T ss_pred CCcCcccCCHHHHh-ccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCC-CCCCcChHHHHHHHHH
Confidence 34567899999986 5668899999999999999999 99998753 222322222222111 1122234568899999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
||+.+|++|||+.|+++.|+.+++..
T Consensus 241 ~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 241 CWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 99999999999999999999997653
No 38
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.1e-42 Score=348.58 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=191.7
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCcccc--CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +..||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 468999999999999975 789999998654322 23357899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC---cccCCCCCCCeEeCC--------CCCeEEeecccc
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR---LVHGNLKSSNVLLGP--------DFEACLADYCLT 535 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~---ivHrDlk~~NILl~~--------~~~~ki~DfGla 535 (664)
++|.+++. ...+++..+..++.|++.||+|||+. + |+||||||+||+++. ++.+||+|||++
T Consensus 91 ~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 91 GPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp EEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 99999994 24689999999999999999999998 7 899999999999986 778999999999
Q ss_pred ccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHH
Q 006031 536 ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERL 615 (664)
Q Consensus 536 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (664)
............+++.|+|||.+. ...++.++||||||+++|||+||+.||... ........+.........+...+
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 240 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DGLAVAYGVAMNKLALPIPSTCP 240 (271)
T ss_dssp ------------CCGGGSCHHHHH-HCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHTSCCCCCCCTTCC
T ss_pred cccccccccCCCCccceeCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHhhhcCCCCCCCCcccC
Confidence 876655544567899999999987 567899999999999999999999999753 22222222222222222233445
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006031 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 646 (664)
..+.+++.+||+.+|++|||+.|+++.|++|
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 6689999999999999999999999999864
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.9e-41 Score=348.32 Aligned_cols=249 Identities=19% Similarity=0.330 Sum_probs=205.3
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|...++..||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++||||+++|+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 105 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCB
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCc
Confidence 468999999999999999999999999975443 46789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~~ 545 (664)
|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 106 L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 106 LLNYLRE----MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHHHC----GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9999963 234699999999999999999999999 99999999999999999999999999998654432 123
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...+....+....... .+......+.+++.+
T Consensus 181 ~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~ 256 (283)
T 3gen_A 181 SKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLY-RPHLASEKVYTIMYS 256 (283)
T ss_dssp TTSCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHH
T ss_pred CccCcccCCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCC-CCCcCCHHHHHHHHH
Confidence 44677899999987 5678999999999999999999 99998753 2233333333222111 122234568899999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
||+.+|++|||+.|+++.|+++.+.
T Consensus 257 ~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 257 CWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999998653
No 40
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-41 Score=373.29 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=204.5
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC-ceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE-ERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.+. ++.||||.++... ..+.|.+|+++|++++||||+++++++.+.+ ..++||||+++|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g 272 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence 468999999999999986 6799999997543 4567999999999999999999999987665 789999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP 547 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 547 (664)
+|.++++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 273 ~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~ 347 (450)
T 1k9a_A 273 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGK 347 (450)
T ss_dssp BHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------C
T ss_pred cHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-cCCC
Confidence 999999742 223479999999999999999999999 99999999999999999999999999998654332 2235
Q ss_pred CCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 548 DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 548 ~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
++..|+|||.+. ...++.++|||||||++|||+| |+.||.... ..++...+...... ..+...+..+.+++.+||
T Consensus 348 ~~~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~~~-~~p~~~~~~l~~li~~cl 423 (450)
T 1k9a_A 348 LPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGYKM-DAPDGCPPAVYDVMKNCW 423 (450)
T ss_dssp CCTTTSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC--TTTHHHHHHTTCCC-CCCTTCCHHHHHHHHHHT
T ss_pred CCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHc
Confidence 678999999987 6778999999999999999999 999997642 23444444332221 223344567899999999
Q ss_pred cCCCCCCCCHHHHHHHHHhhhcc
Q 006031 627 SASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 627 ~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
+.+|++|||+.|+++.|+++...
T Consensus 424 ~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 424 HLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCChhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999998754
No 41
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.1e-42 Score=375.39 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=208.9
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+++|+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs 264 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCC
Confidence 46899999999999999988899999997543 346789999999999999999999999876 77899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---DD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---~~ 545 (664)
|.++++.. ....+++..+..|+.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....... ..
T Consensus 265 L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 265 LLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999531 224589999999999999999999999 999999999999999999999999999987654322 12
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.+++.+
T Consensus 341 ~~~~~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~ 416 (452)
T 1fmk_A 341 AKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRM-PCPPECPESLHDLMCQ 416 (452)
T ss_dssp --CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-CCCTTSCHHHHHHHHH
T ss_pred CcccccccCHhHHh-cCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHH
Confidence 34678899999987 5678999999999999999999 99999753 233444444332221 1233445668999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhccccCCCCCCC
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVLMEDGELD 658 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~~~~~ 658 (664)
||+.+|++|||+.++++.|+++......++.+.+
T Consensus 417 cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~~ 450 (452)
T 1fmk_A 417 CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450 (452)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCSC
T ss_pred HccCChhhCcCHHHHHHHHHHHhccCCccccccc
Confidence 9999999999999999999999877655554443
No 42
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.7e-41 Score=348.35 Aligned_cols=267 Identities=28% Similarity=0.482 Sum_probs=215.1
Q ss_pred ccccCHHHHHHHHh-----------ccccccCceeEEEEEEcCCeEEEEEEccCccc--cCCcHHHHHHHHHHHcCCCCC
Q 006031 376 AQLYTLDQLMRASA-----------ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHP 442 (664)
Q Consensus 376 ~~~~~~~~l~~~~~-----------~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l~H~ 442 (664)
...|+++++..++. +.||+|+||.||+|.. ++..||+|++..... .....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34677788777653 5799999999999987 577899999865432 123457899999999999999
Q ss_pred CcccceEEEecCCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC
Q 006031 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG 522 (664)
Q Consensus 443 niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~ 522 (664)
||+++++++.+.+..++||||+++|+|.+++... .....++|..+..|+.|++.||+|||+. +|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG--GGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEc
Confidence 9999999999999999999999999999999632 1235699999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--hh
Q 006031 523 PDFEACLADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--NE 596 (664)
Q Consensus 523 ~~~~~ki~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--~~ 596 (664)
+++.+||+|||+++...... .....+++.|+|||.+. +.++.++||||||+++|||++|+.||....... ..
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT--TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhc--CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999998654422 22346899999999875 357899999999999999999999997643221 12
Q ss_pred HHHHHHhhc---------cCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 006031 597 MMNWVRSAR---------EDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKG 648 (664)
Q Consensus 597 ~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 648 (664)
+........ .........+..+.+++.+||+.+|++|||+.||++.|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222111110 0112345567789999999999999999999999999999864
No 43
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.6e-41 Score=351.55 Aligned_cols=246 Identities=20% Similarity=0.276 Sum_probs=197.4
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 468999999999999998899999999976554444457889999999999999999999999999999999999985 8
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDDD 546 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~~ 546 (664)
|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 105 l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 179 (311)
T 3niz_A 105 LKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179 (311)
T ss_dssp HHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CC
T ss_pred HHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCC
Confidence 8888863 334689999999999999999999999 99999999999999999999999999998764332 2335
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC-----------------
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG----------------- 609 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----------------- 609 (664)
.+|+.|+|||.+.+...++.++|||||||++|||++|+.||...... ..+............
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence 68999999999875567899999999999999999999999764322 222222221111100
Q ss_pred ----------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 ----------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 ----------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.......++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00112346889999999999999999999986
No 44
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-42 Score=361.82 Aligned_cols=243 Identities=21% Similarity=0.301 Sum_probs=193.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 46899999999999995 57899999999765432 23456889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~ 544 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 94 ~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 167 (347)
T 3zgw_A 94 ELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQ-GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167 (347)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence 99999953 34699999999999999999999999 99999999999999999999999999987654322 23
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...||+.|+|||.+.+...++.++|||||||++|||++|+.||... ...++...+..... ..+......+.+++.+
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~ 243 (347)
T 3zgw_A 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD--NVMALYKKIMRGKY--DVPKWLSPSSILLLQQ 243 (347)
T ss_dssp ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCC--CCCTTCCHHHHHHHHH
T ss_pred ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCC--CCCCCCCHHHHHHHHH
Confidence 4568999999999875444589999999999999999999999753 22233333322221 1222334557899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~ 642 (664)
||+.||++|||+.|+++.
T Consensus 244 ~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 244 MLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HTCSSGGGSCCHHHHHTC
T ss_pred HcccCHhHCcCHHHHhcC
Confidence 999999999999999863
No 45
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=9.1e-42 Score=352.93 Aligned_cols=253 Identities=22% Similarity=0.375 Sum_probs=199.5
Q ss_pred hccccccCceeEEEEEE-----cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC--CceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK--EERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 461 (664)
.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 46899999999999985 3688999999875432 3346789999999999999999999998653 5689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp ECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999642 34589999999999999999999999 9999999999999999999999999999876443
Q ss_pred C-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----------Chh----hHHHHHH
Q 006031 542 L-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL----------VPN----EMMNWVR 602 (664)
Q Consensus 542 ~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~----------~~~----~~~~~~~ 602 (664)
. .....++..|+|||.+. ...++.++||||||+++|||+||..|+..... ... .+.....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp --------CTTCGGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cceeeeccCCCCccceeCcHHhc-CCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 2 12234677899999987 56789999999999999999999999864210 000 1111111
Q ss_pred hhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 603 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
... ....+...+..+.+++.+||+.+|++|||+.|++++|+++++..
T Consensus 247 ~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTC-CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccC-cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111 11123344566999999999999999999999999999997654
No 46
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.9e-41 Score=349.82 Aligned_cols=245 Identities=26% Similarity=0.404 Sum_probs=193.4
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHc--CCCCCCcccceEEEecC----CceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVG--GLRHPNLVPLRAYFQAK----EERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~~~~lV~e 462 (664)
.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++. .++||||+++++++... +..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 86 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH 86 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence 46899999999999988 6889999998643 3344555555554 48999999999987543 45899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH--------QAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
|+++|+|.++++. ..+++..+..|+.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 87 YHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp CCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred hccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 9999999999942 36999999999999999999999 77 999999999999999999999999999
Q ss_pred cccccCCCC------CCCCCCCcccCccccccCC-----CCCchhhHHHHHHHHHHHHcC----------CCCCCCCCCC
Q 006031 535 TALTADSLQ------DDDPDNLLYKAPETRNASH-----QATSKSDVYSFGVLLLELLTG----------KPPSQHSFLV 593 (664)
Q Consensus 535 a~~~~~~~~------~~~~~~~~y~aPE~~~~~~-----~~~~ksDVwSfGvvl~elltG----------~~P~~~~~~~ 593 (664)
++....... ....||+.|+|||.+.... .++.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 976544321 2346899999999987432 334789999999999999999 8888654332
Q ss_pred hh---hHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006031 594 PN---EMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646 (664)
Q Consensus 594 ~~---~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 646 (664)
.. .+...+........ .....+..+.+++.+||+.||++|||+.||++.|++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22 22222211111111 2345677899999999999999999999999999986
No 47
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-41 Score=377.00 Aligned_cols=250 Identities=22% Similarity=0.370 Sum_probs=209.8
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.+.. +..||||.++... ...+.|.+|+++|++++||||++++++|.+.+..++||||+++|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g 301 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 301 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence 4689999999999999865 8899999997543 35678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---D 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---~ 544 (664)
+|.++++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 302 ~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 302 NLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp BHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999999742 235689999999999999999999999 999999999999999999999999999987654321 2
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
...++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.+++.
T Consensus 378 ~~~~~~~y~aPE~~~-~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~ 453 (495)
T 1opk_A 378 GAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRM-ERPEGCPEKVYELMR 453 (495)
T ss_dssp TCCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCCC-CCCTTCCHHHHHHHH
T ss_pred CCcCCcceeCHhHHh-cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHHHH
Confidence 234567899999986 5678999999999999999999 99999764 233444444333222 123334566899999
Q ss_pred HcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 624 ACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
+||+.+|++||||.||++.|+.+...
T Consensus 454 ~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 454 ACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999987543
No 48
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=362.00 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=211.3
Q ss_pred hccccccCceeEEEEEEc--------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEE
Q 006031 389 AELLGKGSLGTTYKAVLD--------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 459 (664)
.+.||+|+||.||+|... .+..||||+++.... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 478999999999999852 346799999975422 22346788999999999 99999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeE
Q 006031 460 IYDYQPNGSLFSLIHGSKS-----------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC 528 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~k 528 (664)
||||+++|+|.+++..... .....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+|
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEE
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCCCcEE
Confidence 9999999999999975331 1134699999999999999999999999 999999999999999999999
Q ss_pred EeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHh
Q 006031 529 LADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRS 603 (664)
Q Consensus 529 i~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 603 (664)
|+|||+++...... .....+++.|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+..
T Consensus 232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~ 308 (382)
T 3tt0_A 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKE 308 (382)
T ss_dssp ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHT
T ss_pred EcccCcccccccccccccccCCCCCcceeCHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHc
Confidence 99999998664432 22344678899999987 6778999999999999999999 99998753 23344444443
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCC
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 653 (664)
..... .+......+.+++.+||+.+|++|||+.||++.|+++......+
T Consensus 309 ~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 309 GHRMD-KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp TCCCC-CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred CCCCC-CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 32222 22234456899999999999999999999999999997666433
No 49
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.4e-41 Score=347.61 Aligned_cols=246 Identities=21% Similarity=0.292 Sum_probs=197.8
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 467999999999999998899999999976554444457788999999999999999999999999999999999975 9
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDDD 546 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~~ 546 (664)
|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 86 l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (288)
T 1ob3_A 86 LKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (288)
T ss_dssp HHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred HHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence 9999863 235689999999999999999999999 99999999999999999999999999998654322 2234
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC------------------
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD------------------ 608 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~------------------ 608 (664)
.+|+.|+|||.+.+...++.++|||||||++|||+||+.||..... ...+...........
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T 1ob3_A 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239 (288)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHHCCCChhhchhhhcccccccccc
Confidence 6799999999987556689999999999999999999999976421 122222222111100
Q ss_pred --------CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 --------GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 --------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001123456889999999999999999999875
No 50
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-41 Score=355.75 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=199.4
Q ss_pred hccccccCceeEEEEEEc-CCe----EEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRL----IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|... ++. .||+|.+.... .....+.+.+|++++++++||||++++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 468999999999999954 333 46888876433 234567899999999999999999999999875 47899999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.++++. ....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 98 MPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred cCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999974 235699999999999999999999999 999999999999999999999999999987644322
Q ss_pred ----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 544 ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 544 ----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
....+|..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+....... .+......+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 248 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLP-QPPICTIDV 248 (327)
T ss_dssp -------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCCC-CCTTBCHHH
T ss_pred cccccCCCccccccChHHhc-cCCCCchhhhhhhHHHHHHHHhcCCCCccCC--CHHHHHHHHHcCCCCC-CCccCCHHH
Confidence 1234678999999987 6778999999999999999999 99999764 2334444444333222 223344568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKG 648 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 648 (664)
.+++.+||+.+|++||++.|+++.|+++..
T Consensus 249 ~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 249 YMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999998864
No 51
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.6e-41 Score=355.11 Aligned_cols=244 Identities=20% Similarity=0.295 Sum_probs=202.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC----CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|... +|+.||+|.++...... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 468999999999999965 58899999997654322 2457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC----CeEEeecccccccc
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF----EACLADYCLTALTA 539 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~~~~ 539 (664)
+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++ .+||+|||+++...
T Consensus 97 ~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 97 VSGGELFDFLA-----QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp CCSCBHHHHHT-----TCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 99999999994 345799999999999999999999999 999999999999998877 79999999998765
Q ss_pred CCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHH
Q 006031 540 DSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLG 616 (664)
Q Consensus 540 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 616 (664)
... .....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...+....+.......+ .......
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~ 247 (361)
T 2yab_A 171 DGVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDEEFFSQTSE 247 (361)
T ss_dssp TTCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCHHHHTTSCH
T ss_pred CCCccccCCCCccEECchHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCchhccCCCH
Confidence 432 23456899999999986 567899999999999999999999999753 22333333322222111 1122345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+.+++.+||..||++|||+.|+++
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 6899999999999999999999874
No 52
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.9e-41 Score=341.26 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=208.6
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence 467999999999999998899999999976443 45789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~~ 545 (664)
|.++++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... ...
T Consensus 90 L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 90 LSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 99999642 34689999999999999999999999 99999999999999999999999999998654321 223
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+. ...++.++||||||+++|||++ |+.||... ...+....+....... .+...+..+.+++.+
T Consensus 165 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~ 240 (267)
T 3t9t_A 165 TKFPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY-KPRLASTHVYQIMNH 240 (267)
T ss_dssp TTCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC-CCTTSCHHHHHHHHH
T ss_pred ccccccccChhhhc-CCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCC-CCccCcHHHHHHHHH
Confidence 45678899999986 5678999999999999999999 89998753 2333333333222211 122234568899999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
||+.+|++|||+.|+++.|+++.+.
T Consensus 241 ~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 241 CWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999764
No 53
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=380.60 Aligned_cols=256 Identities=23% Similarity=0.329 Sum_probs=208.0
Q ss_pred cccccCceeEEEEEEc---CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 391 LLGKGSLGTTYKAVLD---NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 391 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.||+|+||.||+|.+. ++..||||+++... .....+.|.+|+++|++++|||||+++++|.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 56789999997643 23456889999999999999999999999976 6799999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC----
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---- 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---- 543 (664)
+|.++++. ....+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 421 ~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 421 PLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp BHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred cHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999963 345699999999999999999999999 999999999999999999999999999987643221
Q ss_pred -CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 544 -DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
....+++.|+|||++. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.++
T Consensus 496 ~~~~~~~~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~-~~p~~~~~~l~~l 571 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKRM-ECPPECPPELYAL 571 (613)
T ss_dssp ------CCTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CSHHHHHHHHTTCCC-CCCTTCCHHHHHH
T ss_pred ccCCCCccceeCHhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCcCCHHHHHH
Confidence 1223467899999987 6788999999999999999998 99999764 233454444433222 2233445669999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHhhhccccCCCCCC
Q 006031 622 AIACNSASPEQRPTMWQVLKMLQEIKGAVLMEDGEL 657 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~~~~ 657 (664)
+.+||+.+|++||+|.+|++.|+.+......+....
T Consensus 572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~ 607 (613)
T 2ozo_A 572 MSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGG 607 (613)
T ss_dssp HHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCS
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCc
Confidence 999999999999999999999999876654444333
No 54
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-41 Score=357.06 Aligned_cols=257 Identities=23% Similarity=0.386 Sum_probs=207.3
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||.||+|... +++.||+|.++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 467999999999999975 348999999975432 2235679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC
Q 006031 463 YQPNGSLFSLIHGSKST-------------------RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP 523 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~ 523 (664)
|+++|+|.++++..... ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNCLVGE 209 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEECC
Confidence 99999999999753211 125799999999999999999999999 9999999999999999
Q ss_pred CCCeEEeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHH
Q 006031 524 DFEACLADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMM 598 (664)
Q Consensus 524 ~~~~ki~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~ 598 (664)
++.+||+|||+++...... .....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...++.
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~ 286 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGLQPYYGM--AHEEVI 286 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHH
T ss_pred CCeEEEeecCCCcccccCccccccCCCcccceecChhhhc-cCCcCcccccHHHHHHHHHHHhcCCCcCCCC--ChHHHH
Confidence 9999999999997653321 12345788999999887 5678999999999999999999 99998753 233444
Q ss_pred HHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 599 NWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
..+...... ..+...+..+.+++.+||+.+|++|||+.|+++.|+++.+...
T Consensus 287 ~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 287 YYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp HHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred HHHhCCCcC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 433332221 1223344568999999999999999999999999999876553
No 55
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.9e-41 Score=359.75 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=203.2
Q ss_pred HhccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 388 SAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
..+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999964 588999999976554333456789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC---CeEEeeccccccccCCC-
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF---EACLADYCLTALTADSL- 542 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~---~~ki~DfGla~~~~~~~- 542 (664)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||++.......
T Consensus 113 g~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 113 GELFEDIV-----AREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CBHHHHHT-----TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999995 335689999999999999999999999 999999999999998654 59999999998765433
Q ss_pred CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHH
Q 006031 543 QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLE 620 (664)
Q Consensus 543 ~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 620 (664)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++...+....... ......+..+.+
T Consensus 187 ~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 263 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263 (362)
T ss_dssp CCCSCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTGGGGSCHHHHH
T ss_pred cccCCCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 23457899999999987 567899999999999999999999999753 2233333333322221 122334566899
Q ss_pred HHHHcccCCCCCCCCHHHHHHH
Q 006031 621 VAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
++.+||+.||++|||+.|+++.
T Consensus 264 li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 264 LIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHcCCChhhCcCHHHHhcC
Confidence 9999999999999999998764
No 56
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=348.69 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=198.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|... ++.||+|++... ...+.|.+|++++++++||||+++++++. +..++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGS 85 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCB
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCC
Confidence 468999999999999975 678999998643 34678999999999999999999999886 45899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCCCCCeEeCCCCC-eEEeeccccccccCCCCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ---AWRLVHGNLKSSNVLLGPDFE-ACLADYCLTALTADSLQD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~---~~~ivHrDlk~~NILl~~~~~-~ki~DfGla~~~~~~~~~ 544 (664)
|.++++... ....+++..++.++.|+++||+|||+ . +|+||||||+||+++.++. +||+|||++....... .
T Consensus 86 L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-~ 161 (307)
T 2eva_A 86 LYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-T 161 (307)
T ss_dssp HHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred HHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEccccccccccccc-c
Confidence 999997432 22357889999999999999999999 5 8999999999999998887 7999999997654332 2
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...++..|+|||.+. ...++.++||||||+++|||+||+.||.........+....... .........+..+.+++.+
T Consensus 162 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 162 NNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG-TRPPLIKNLPKPIESLMTR 239 (307)
T ss_dssp ---CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT-CCCCCBTTCCHHHHHHHHH
T ss_pred cCCCCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC-CCCCcccccCHHHHHHHHH
Confidence 346899999999987 56789999999999999999999999976433322322222222 1222223344568999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhccccC
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVLM 652 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~~ 652 (664)
||+.+|++|||+.|+++.|+.+......
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999876643
No 57
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-41 Score=351.34 Aligned_cols=255 Identities=18% Similarity=0.309 Sum_probs=202.1
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .++..||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 46899999999999995 468899999986443221 2346789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (294)
T 4eqm_A 96 PTLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169 (294)
T ss_dssp CBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence 999999953 34689999999999999999999999 999999999999999999999999999986644321
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 621 (664)
....||+.|+|||.+. ...++.++||||||+++|||+||+.||...... .............. ......+..+.++
T Consensus 170 ~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 247 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-SIAIKHIQDSVPNVTTDVRKDIPQSLSNV 247 (294)
T ss_dssp -----CCSSCCHHHHH-TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-HHHHHHHSSCCCCHHHHSCTTSCHHHHHH
T ss_pred CccccCccccCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhhccCCCcchhcccCCCHHHHHH
Confidence 2345899999999987 567899999999999999999999999763211 11111111111100 0112334668999
Q ss_pred HHHcccCCCCCCC-CHHHHHHHHHhhhcccc
Q 006031 622 AIACNSASPEQRP-TMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 622 ~~~Cl~~~P~~RP-t~~ev~~~L~~i~~~~~ 651 (664)
+.+||+.+|++|| ++.++.+.|+.+.....
T Consensus 248 i~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 248 ILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 9999999999999 99999999998865543
No 58
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.8e-41 Score=354.00 Aligned_cols=262 Identities=23% Similarity=0.380 Sum_probs=195.6
Q ss_pred HhccccccCceeEEEEEEcCC----eEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCce------
Q 006031 388 SAELLGKGSLGTTYKAVLDNR----LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEER------ 457 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~------ 457 (664)
..+.||+|+||.||+|..... ..||||.++.........+.+.+|++++++++||||+++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 357899999999999986543 2799999976544444567899999999999999999999999877655
Q ss_pred EEEEecCCCCCHHHHhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 458 LLIYDYQPNGSLFSLIHGSKS-TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 458 ~lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
++||||+++|+|.+++..... .....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEeeccccc
Confidence 999999999999999964221 1223689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCch
Q 006031 537 LTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAE 611 (664)
Q Consensus 537 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (664)
....... ....+++.|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~ 261 (323)
T 3qup_A 186 KIYSGDYYRQGCASKLPVKWLALESLA-DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI--ENAEIYNYLIGGNRL-KQP 261 (323)
T ss_dssp ---------------CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCC-CCC
T ss_pred cccccccccccccccCcccccCchhhc-CCCCCCccchhhHHHHHHHHHhCCCCCcccc--ChHHHHHHHhcCCCC-CCC
Confidence 6544321 1234677899999987 5678999999999999999999 99998764 233443333322221 122
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCCC
Q 006031 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654 (664)
Q Consensus 612 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~ 654 (664)
...+..+.+++.+||+.||++|||+.|+++.|+++........
T Consensus 262 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 262 PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 3344568999999999999999999999999999976654333
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=353.07 Aligned_cols=245 Identities=20% Similarity=0.286 Sum_probs=201.9
Q ss_pred HhccccccCceeEEEEEEc-CCeEEEEEEccCccccC----CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 388 SAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
..+.||+|+||.||+|... ++..||+|.+....... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 3578999999999999965 58899999987543321 246789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC----CeEEeeccccccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF----EACLADYCLTALT 538 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~~~ 538 (664)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 95 ~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 95 LVAGGELFDFLA-----EKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp CCCSCBHHHHHT-----TSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred cCCCCCHHHHHH-----hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999994 345699999999999999999999999 999999999999999887 7999999999876
Q ss_pred cCC-CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHH
Q 006031 539 ADS-LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERL 615 (664)
Q Consensus 539 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 615 (664)
... ......+|+.|+|||.+. ...++.++|||||||++|||++|+.||... ...+....+........ .....+
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred CCCCccccccCCcCcCCceeec-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcCccccccCC
Confidence 433 223456899999999986 567899999999999999999999999753 22233322222221111 112234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 616 GMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 56889999999999999999999986
No 60
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=362.08 Aligned_cols=256 Identities=22% Similarity=0.319 Sum_probs=206.8
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||+||+|.+. ++..||||++..... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 468999999999999853 467899999964322 2334578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC---CeEEeecccccc
Q 006031 463 YQPNGSLFSLIHGSKS--TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF---EACLADYCLTAL 537 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~---~~ki~DfGla~~ 537 (664)
|+++|+|.++++.... .....+++..++.|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 9999999999975321 2234689999999999999999999999 999999999999999555 599999999975
Q ss_pred ccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 538 TADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 538 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
..... .....+|+.|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+....... .+.
T Consensus 234 ~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~~~~~-~~~ 309 (367)
T 3l9p_A 234 IYRAGYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGRMD-PPK 309 (367)
T ss_dssp HHHHSSCTTCCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCC-CCT
T ss_pred cccccccccCCCcCCcccEECHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCC-CCc
Confidence 43221 12234688999999987 5678999999999999999998 99999763 3344444444333221 223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..+..+.+++.+||+.+|++|||+.||++.|+.+....
T Consensus 310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 34456899999999999999999999999999886544
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.4e-41 Score=354.82 Aligned_cols=246 Identities=21% Similarity=0.258 Sum_probs=200.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 468999999999999965 788999999865433 123467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC----CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQ 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 543 (664)
+|.+++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 91 ~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 91 ELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp EGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred cHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 9999995 335699999999999999999999998 9999999999999999999999999999765322 12
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||.+......+.++|||||||++|||++|+.||............+....... .........+.+++.
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~ 243 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLALLH 243 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-TTGGGSCHHHHHHHH
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-CccccCCHHHHHHHH
Confidence 3456899999999987444457899999999999999999999986543334444444332222 222334556889999
Q ss_pred HcccCCCCCCCCHHHHHHH
Q 006031 624 ACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~ 642 (664)
+||+.||++|||+.|+++.
T Consensus 244 ~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 244 KILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHccCChhhCcCHHHHhhC
Confidence 9999999999999999764
No 62
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.2e-41 Score=361.99 Aligned_cols=257 Identities=22% Similarity=0.312 Sum_probs=205.0
Q ss_pred hccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCc-eEEE
Q 006031 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEE-RLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~-~~lV 460 (664)
.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|++++.++ +||||++++++|.+.+. .++|
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 46899999999999974 3468999999975432 12346799999999999 79999999999987654 8999
Q ss_pred EecCCCCCHHHHhccCCCC-------------------------------------------------------------
Q 006031 461 YDYQPNGSLFSLIHGSKST------------------------------------------------------------- 479 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~------------------------------------------------------------- 479 (664)
|||+++|+|.++++.....
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 9999999999999754321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC----CCCCCCCcccCc
Q 006031 480 RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ----DDDPDNLLYKAP 555 (664)
Q Consensus 480 ~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~----~~~~~~~~y~aP 555 (664)
....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....+|+.|+||
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCH
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeECh
Confidence 012389999999999999999999999 999999999999999999999999999986543321 223467889999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCC
Q 006031 556 ETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634 (664)
Q Consensus 556 E~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 634 (664)
|.+. ...++.++|||||||++|||+| |+.||...... ..+...+...... ..+......+.+++.+||+.+|++||
T Consensus 265 E~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rp 341 (359)
T 3vhe_A 265 ETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRM-RAPDYTTPEMYQTMLDCWHGEPSQRP 341 (359)
T ss_dssp HHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred hhhc-CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9987 6778999999999999999999 99999764322 2333333322221 12233445689999999999999999
Q ss_pred CHHHHHHHHHhhhccc
Q 006031 635 TMWQVLKMLQEIKGAV 650 (664)
Q Consensus 635 t~~ev~~~L~~i~~~~ 650 (664)
|+.|+++.|+++....
T Consensus 342 s~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 342 TFSELVEHLGNLLQAN 357 (359)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999987643
No 63
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.6e-41 Score=347.56 Aligned_cols=251 Identities=22% Similarity=0.401 Sum_probs=195.5
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||+||+|...+ .||+|+++.........+.+.+|++++++++||||+++++++ ..+..++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 4689999999999998654 599999976554334457899999999999999999999965 4567899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC----CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQD 544 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~~ 544 (664)
|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 106 L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (289)
T 3og7_A 106 LYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180 (289)
T ss_dssp HHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC---------------
T ss_pred HHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccccc
Confidence 9999963 345699999999999999999999999 9999999999999999999999999999765432 112
Q ss_pred CCCCCCcccCccccc--cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC---chhHHHHHHH
Q 006031 545 DDPDNLLYKAPETRN--ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG---AEDERLGMLL 619 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~--~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 619 (664)
...+++.|+|||.+. ....++.++||||||+++|||++|+.||.... ....+...+........ .....+..+.
T Consensus 181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (289)
T 3og7_A 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259 (289)
T ss_dssp ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSCCCCTTSSCTTSCHHHH
T ss_pred ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhcccccCcchhhccccCCHHHH
Confidence 345899999999875 24567889999999999999999999997642 23344444433322221 2234456799
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 006031 620 EVAIACNSASPEQRPTMWQVLKMLQEIKG 648 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 648 (664)
+++.+||+.+|++|||+.|++++|+++..
T Consensus 260 ~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 260 RLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999864
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.1e-41 Score=352.86 Aligned_cols=242 Identities=18% Similarity=0.242 Sum_probs=200.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|... +++.||+|+++.... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 468999999999999965 688999999975432 234567789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQD 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~~ 544 (664)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ....
T Consensus 90 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 163 (337)
T 1o6l_A 90 GELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp CBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccc
Confidence 999999953 34689999999999999999999999 999999999999999999999999999986432 2233
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++...+.... ...+......+.+++.+
T Consensus 164 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~ 238 (337)
T 1o6l_A 164 TFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEE--IRFPRTLSPEAKSLLAG 238 (337)
T ss_dssp CCEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHH
T ss_pred ccccChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHH
Confidence 456899999999987 567899999999999999999999999753 2233333322211 11223344568999999
Q ss_pred cccCCCCCCC-----CHHHHHH
Q 006031 625 CNSASPEQRP-----TMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RP-----t~~ev~~ 641 (664)
||+.+|++|| ++.|+++
T Consensus 239 lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 239 LLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HTCSSTTTSTTCSTTTHHHHHT
T ss_pred HhhcCHHHhcCCCCCCHHHHHc
Confidence 9999999999 8999875
No 65
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=347.37 Aligned_cols=244 Identities=21% Similarity=0.300 Sum_probs=191.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC------------------------CcHHHHHHHHHHHcCCCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG------------------------TSNEMYEQHMESVGGLRHPN 443 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~------------------------~~~~~~~~e~~~l~~l~H~n 443 (664)
.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 46899999999999986 468899999986543211 12356889999999999999
Q ss_pred cccceEEEec--CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe
Q 006031 444 LVPLRAYFQA--KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL 521 (664)
Q Consensus 444 iv~l~g~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl 521 (664)
|+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV 170 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEE
Confidence 9999999986 567899999999999987652 34699999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeccccccccCCC--CCCCCCCCcccCccccccCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhH
Q 006031 522 GPDFEACLADYCLTALTADSL--QDDDPDNLLYKAPETRNASHQ--ATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEM 597 (664)
Q Consensus 522 ~~~~~~ki~DfGla~~~~~~~--~~~~~~~~~y~aPE~~~~~~~--~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~ 597 (664)
+.++.+||+|||+++...... .....+|+.|+|||.+..... ++.++|||||||++|||++|+.||... ....+
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~ 248 (298)
T 2zv2_A 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE--RIMCL 248 (298)
T ss_dssp CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHH
T ss_pred CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--cHHHH
Confidence 999999999999998765432 234568999999999864332 478899999999999999999999753 22223
Q ss_pred HHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 598 MNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
...+.............+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 249 HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 22222222221112233456899999999999999999999874
No 66
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=367.08 Aligned_cols=244 Identities=23% Similarity=0.268 Sum_probs=201.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 47899999999999985 56899999999766544345577899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC---CCCCeEEeeccccccccCCCC-
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~---~~~~~ki~DfGla~~~~~~~~- 543 (664)
+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+++.......
T Consensus 96 ~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~ 169 (444)
T 3soa_A 96 ELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169 (444)
T ss_dssp BHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence 99999963 35699999999999999999999999 999999999999998 568899999999987654322
Q ss_pred -CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHHHHHH
Q 006031 544 -DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLGMLLE 620 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 620 (664)
....||+.|+|||.+. ...++.++||||+||++|||++|+.||... ...++...+........ .....+..+.+
T Consensus 170 ~~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 170 WFGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 246 (444)
T ss_dssp CCCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred eecccCCcccCCHHHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 3456899999999986 567899999999999999999999999753 23344333333222211 12234566899
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 006031 621 VAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
++.+||+.||++|||+.|+++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999986
No 67
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.8e-41 Score=378.16 Aligned_cols=257 Identities=27% Similarity=0.421 Sum_probs=212.4
Q ss_pred HhccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 388 SAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+++|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g 346 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 346 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence 356899999999999999988899999997543 346789999999999999999999999876 7789999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---QD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~~ 544 (664)
+|.++++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++...... ..
T Consensus 347 sL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 422 (535)
T 2h8h_A 347 SLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422 (535)
T ss_dssp EHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred cHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence 999999531 224589999999999999999999999 99999999999999999999999999998764321 12
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
...++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.+++.
T Consensus 423 ~~~~~~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 423 GAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRM-PCPPECPESLHDLMC 498 (535)
T ss_dssp STTSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCCC-CCCTTCCHHHHHHHH
T ss_pred CCcCcccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHHHH
Confidence 334678899999987 5678999999999999999999 99999753 233444444332221 122334556899999
Q ss_pred HcccCCCCCCCCHHHHHHHHHhhhccccCCCCC
Q 006031 624 ACNSASPEQRPTMWQVLKMLQEIKGAVLMEDGE 656 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~~~ 656 (664)
+||+.+|++|||+.+|++.|+++......++.+
T Consensus 499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~ 531 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 531 (535)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC
T ss_pred HHcCCChhHCcCHHHHHHHHHHHhhccCcccCc
Confidence 999999999999999999999997766554443
No 68
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.9e-41 Score=345.07 Aligned_cols=247 Identities=19% Similarity=0.238 Sum_probs=198.5
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 467999999999999964 588999999976655445567889999999999999999999999999999999999976
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 86 ~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (292)
T 3o0g_A 86 DLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160 (292)
T ss_dssp EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence 66666542 235699999999999999999999999 99999999999999999999999999998764332 234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC----------------
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG---------------- 609 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---------------- 609 (664)
..+|..|+|||.+.+...++.++|||||||++|||+||..|+.........+............
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (292)
T 3o0g_A 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240 (292)
T ss_dssp CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence 5689999999998755558999999999999999999888865433222223222222111110
Q ss_pred ----------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 ----------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 ----------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 01123456889999999999999999999975
No 69
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-40 Score=344.35 Aligned_cols=252 Identities=13% Similarity=0.167 Sum_probs=204.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++.++++ +|+|++++++++.+....++||||+ +
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 89 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G 89 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-C
Confidence 46799999999999995 678999999986433 234578889999998 7999999999999999999999999 9
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC-----eEEeeccccccccCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE-----ACLADYCLTALTADS 541 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~-----~ki~DfGla~~~~~~ 541 (664)
++|.++++.. ...+++..+..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 90 ~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 90 PSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp CBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred CCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9999999642 34599999999999999999999999 9999999999999988776 999999999876543
Q ss_pred CC---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-hhhHHHHHHhhccCCC--
Q 006031 542 LQ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-PNEMMNWVRSAREDDG-- 609 (664)
Q Consensus 542 ~~---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~-- 609 (664)
.. ....||+.|+|||.+. ...++.++|||||||++|||++|+.||...... .......+........
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH
T ss_pred cccccccccCccCCCCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH
Confidence 21 2345899999999987 567899999999999999999999999864322 2222222221111111
Q ss_pred -chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 610 -AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 610 -~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
.....+..+.+++.+||+.+|++||++.+|++.|+++.....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 111234568999999999999999999999999999976653
No 70
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-41 Score=358.85 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=197.6
Q ss_pred hccccccCceeEEEEEEc--C--CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec-CCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD--N--RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA-KEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~--~--~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|... + +..||+|.++.... ....+.|.+|+.++++++||||++++++|.+ .+..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 468999999999999863 2 24689999864322 2345789999999999999999999998754 4578999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 173 ~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 173 MKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp CTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999963 335688999999999999999999999 999999999999999999999999999986543221
Q ss_pred ------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHH
Q 006031 544 ------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG 616 (664)
Q Consensus 544 ------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (664)
....+++.|+|||.+. ...++.++|||||||++|||+| |.+||.... ..++...+...... ..+...+.
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~--~~~~~~~~~~~~~~-~~p~~~~~ 323 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRRL-LQPEYCPD 323 (373)
T ss_dssp ----------CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--SSCHHHHHHTTCCC-CCCTTCCH
T ss_pred ccccccCCCCCcccccChHHhc-CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC--HHHHHHHHHcCCCC-CCCCCCCH
Confidence 1234677899999987 6778999999999999999999 677776532 22333333322221 12233445
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCCC
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~ 654 (664)
.+.+++.+||+.+|++|||+.|+++.|+++......+.
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 68999999999999999999999999999987775443
No 71
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.4e-41 Score=351.65 Aligned_cols=250 Identities=13% Similarity=0.135 Sum_probs=203.4
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 46899999999999995 6789999999865432 34588999999999 9999999999999999999999999 9
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC-----eEEeeccccccccCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE-----ACLADYCLTALTADS 541 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~-----~ki~DfGla~~~~~~ 541 (664)
++|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 89 ~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 89 PSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp CBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9999999642 35799999999999999999999999 9999999999999999887 999999999865433
Q ss_pred CC---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-hhHHHHHHhhccCCCc-
Q 006031 542 LQ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP-NEMMNWVRSAREDDGA- 610 (664)
Q Consensus 542 ~~---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~-~~~~~~~~~~~~~~~~- 610 (664)
.. ....||+.|+|||.+. ...++.++|||||||++|||++|+.||....... .+....+.........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHL-GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHc-CCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH
Confidence 21 2456899999999987 5778999999999999999999999998643221 1222222111111110
Q ss_pred --hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 611 --EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 611 --~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
....+ .+.+++..||+.+|++||++.+|++.|+++....
T Consensus 243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 11123 6999999999999999999999999999886654
No 72
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.5e-41 Score=348.29 Aligned_cols=249 Identities=19% Similarity=0.295 Sum_probs=198.1
Q ss_pred hccccccCceeEEEEEEcC-C-------eEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEE
Q 006031 389 AELLGKGSLGTTYKAVLDN-R-------LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 460 (664)
.+.||+|+||+||+|.... + ..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 90 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR--NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILV 90 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG--GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEE
Confidence 4679999999999998543 2 5799999865432 4567899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC--------eEEeec
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE--------ACLADY 532 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~--------~ki~Df 532 (664)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 91 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 91 QEFVKFGSLDTYLKK----NKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EECCTTCBHHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EECCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999964 234489999999999999999999999 9999999999999998887 999999
Q ss_pred cccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 533 CLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 533 Gla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
|++....... ...++..|+|||.+.....++.++|||||||++|||++|..|+.... ............... +.
T Consensus 166 g~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~~~~~~~~~~~~---~~ 239 (289)
T 4fvq_A 166 GISITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQRKLQFYEDRHQL---PA 239 (289)
T ss_dssp CSCTTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHHHHHTTCCC---CC
T ss_pred cccccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chHHHHHHhhccCCC---CC
Confidence 9986543321 12367889999998744678999999999999999999655443322 222222222221111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 12334889999999999999999999999999987654
No 73
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.4e-41 Score=348.93 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=207.9
Q ss_pred hccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 47899999999999985 3458899999975322 2334678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC
Q 006031 463 YQPNGSLFSLIHGSKST-------------------RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP 523 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~ 523 (664)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||++++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~NIli~~ 185 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNILVAE 185 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEET
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchheEEEcC
Confidence 99999999999753221 123589999999999999999999999 9999999999999999
Q ss_pred CCCeEEeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHH
Q 006031 524 DFEACLADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMM 598 (664)
Q Consensus 524 ~~~~ki~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~ 598 (664)
++.+||+|||+++...... .....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ....+.
T Consensus 186 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~ 262 (314)
T 2ivs_A 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLF 262 (314)
T ss_dssp TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHH
T ss_pred CCCEEEccccccccccccccceeccCCCCcccccChhhhc-CCCcCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHH
Confidence 9999999999998654332 12345678899999886 5678999999999999999999 99999764 233444
Q ss_pred HHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 599 NWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
..+...... ..+...+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 263 ~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 263 NLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHhhcCCcC-CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 444333222 12233455689999999999999999999999999998654
No 74
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=345.35 Aligned_cols=255 Identities=19% Similarity=0.232 Sum_probs=205.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC--ceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE--ERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lV~e~~~ 465 (664)
.++||+|+||+||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 468999999999999975 488999999975443 234677889999999999999999999988655 7799999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe----CCCCCeEEeeccccccccCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADS 541 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla~~~~~~ 541 (664)
+|+|.+++.... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999997432 223499999999999999999999999 99999999999999 88888999999999876544
Q ss_pred CC-CCCCCCCcccCcccccc-------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--hhH-HHHHHhhccC---
Q 006031 542 LQ-DDDPDNLLYKAPETRNA-------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--NEM-MNWVRSARED--- 607 (664)
Q Consensus 542 ~~-~~~~~~~~y~aPE~~~~-------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--~~~-~~~~~~~~~~--- 607 (664)
.. ....+|..|+|||.+.. ...++.++|||||||++|||+||+.||....... .++ ..........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 32 34568999999998742 3568899999999999999999999997533221 122 2222211110
Q ss_pred -------------------CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 006031 608 -------------------DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647 (664)
Q Consensus 608 -------------------~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 647 (664)
..........+.+++.+||+.||++|||+.|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 0123566777999999999999999999999999987653
No 75
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.7e-41 Score=359.42 Aligned_cols=255 Identities=17% Similarity=0.200 Sum_probs=197.2
Q ss_pred hccccccCceeEEEEEEcC------CeEEEEEEccCccccC---------CcHHHHHHHHHHHcCCCCCCcccceEEEec
Q 006031 389 AELLGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAG---------TSNEMYEQHMESVGGLRHPNLVPLRAYFQA 453 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~---------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 453 (664)
.+.||+|+||.||+|.... ++.||||++....... .....+.+|+..++.++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4689999999999999765 4789999986543110 011223456667888999999999999876
Q ss_pred C----CceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC--CCCCe
Q 006031 454 K----EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG--PDFEA 527 (664)
Q Consensus 454 ~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~--~~~~~ 527 (664)
. ...++||||+ +++|.+++.. ....+++..+..|+.||+.||+|||+. +|+||||||+|||++ .++.+
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~~~ 193 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPDQV 193 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTTCE
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCCeE
Confidence 4 4589999999 9999999964 235699999999999999999999999 999999999999999 88999
Q ss_pred EEeeccccccccCCCC---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHH
Q 006031 528 CLADYCLTALTADSLQ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMM 598 (664)
Q Consensus 528 ki~DfGla~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~ 598 (664)
||+|||+++....... ....||+.|+|||.+. ...++.++|||||||++|||+||+.||......... .
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~-~ 271 (364)
T 3op5_A 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY-V 271 (364)
T ss_dssp EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH-H
T ss_pred EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH-H
Confidence 9999999976543211 2234899999999987 567899999999999999999999999854333221 1
Q ss_pred HHHHhhccCC-C-c------hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 599 NWVRSAREDD-G-A------EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 599 ~~~~~~~~~~-~-~------~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
.......... . . ....+..+.+++..||+.+|++||++.+|++.|+++.....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1111111100 0 0 01224568999999999999999999999999999876553
No 76
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=349.27 Aligned_cols=240 Identities=20% Similarity=0.202 Sum_probs=188.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||+||+|... +++.||||++............+..|+..+.++ +||||++++++|.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 468999999999999976 789999999865433222334455555555444 8999999999999999999999999 6
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-CC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~-~~ 545 (664)
++|.+++... ...++|..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||++........ ..
T Consensus 141 ~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (311)
T 3p1a_A 141 PSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV 215 (311)
T ss_dssp CBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence 7999988642 34699999999999999999999999 999999999999999999999999999987654332 33
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|+|||++. +.++.++|||||||++|||++|..|+... ...... ................+.+++.+|
T Consensus 216 ~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 216 QEGDPRYMAPELLQ--GSYGTAADVFSLGLTILEVACNMELPHGG----EGWQQL-RQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp CCCCGGGCCGGGGG--TCCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHH-TTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred cCCCccccCHhHhc--CCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHH-hccCCCcccccCCCHHHHHHHHHH
Confidence 46899999999886 36899999999999999999997765431 121111 111111111223346689999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.+|++|||+.|+++
T Consensus 289 L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 289 LEPDPKLRATAEALLA 304 (311)
T ss_dssp SCSSTTTSCCHHHHHT
T ss_pred cCCChhhCcCHHHHHh
Confidence 9999999999999985
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.3e-41 Score=354.46 Aligned_cols=248 Identities=18% Similarity=0.261 Sum_probs=200.6
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCcccc---CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA---GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
..+.||+|+||+||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 457899999999999986 46899999998643321 23467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC---eEEeeccccccccC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTALTAD 540 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~~~ 540 (664)
+++|+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 108 ~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 108 MDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp CSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 99999998885321 1234589999999999999999999999 9999999999999987655 99999999987654
Q ss_pred CC--CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc--hhHHHH
Q 006031 541 SL--QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA--EDERLG 616 (664)
Q Consensus 541 ~~--~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 616 (664)
.. .....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ..++...+......... ....+.
T Consensus 186 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~~~~~~~~s~ 261 (351)
T 3c0i_A 186 SGLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMNPRQWSHISE 261 (351)
T ss_dssp TSCBCCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred CCeeecCCcCCcCccCHHHHc-CCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCCccccccCCH
Confidence 32 23456899999999987 567899999999999999999999999752 23333322222211111 122345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 262 SAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 6899999999999999999999985
No 78
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.7e-41 Score=382.17 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=204.6
Q ss_pred ccccccCceeEEEEEEc---CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLD---NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
+.||+|+||.||+|.+. .++.||||+++.........+.+.+|+++|++++|||||+++++|. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999753 4678999999765544455688999999999999999999999996 4568999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
|+|.++++. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999963 34689999999999999999999999 999999999999999999999999999987644321
Q ss_pred --CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 544 --DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 544 --~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
....+++.|+|||++. ...++.++|||||||++|||+| |+.||... ...++...+...... ..+...+..+.+
T Consensus 528 ~~~~~~~t~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~-~~p~~~~~~l~~ 603 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM-GCPAGCPREMYD 603 (635)
T ss_dssp -------CGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-CCCTTCCHHHHH
T ss_pred cccCCCCceeeeChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHH
Confidence 1234578899999986 6778999999999999999999 99999763 233444444433222 223344566999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 621 VAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
++.+||+.||++||++.+|++.|+++...
T Consensus 604 li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 604 LMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999987543
No 79
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.7e-40 Score=347.12 Aligned_cols=243 Identities=19% Similarity=0.290 Sum_probs=193.5
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc-----------
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE----------- 456 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----------- 456 (664)
.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||++++++|.+.+.
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 468999999999999976 78999999997543 23456789999999999999999999999865432
Q ss_pred ----------------------------------------------eEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHH
Q 006031 457 ----------------------------------------------RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL 490 (664)
Q Consensus 457 ----------------------------------------------~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~ 490 (664)
.++||||+++|+|.+++.... .....++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--CccchhhHHHH
Confidence 799999999999999997532 23456777899
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--------------CCCCCCCCcccCcc
Q 006031 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--------------QDDDPDNLLYKAPE 556 (664)
Q Consensus 491 ~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--------------~~~~~~~~~y~aPE 556 (664)
.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .....||+.|+|||
T Consensus 168 ~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 9999999999999999 99999999999999999999999999998765432 12345899999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCH
Q 006031 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTM 636 (664)
Q Consensus 557 ~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 636 (664)
.+. ...++.++|||||||++|||++|..|+.. ........... ............+.+++.+||+.||++|||+
T Consensus 247 ~~~-~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 320 (332)
T 3qd2_B 247 QIH-GNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRNL-KFPLLFTQKYPQEHMMVQDMLSPSPTERPEA 320 (332)
T ss_dssp HHH-CCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHTT-CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred Hhc-CCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhcc-CCCcccccCChhHHHHHHHHccCCCCcCCCH
Confidence 987 56789999999999999999998776421 11222211111 1111223445567899999999999999999
Q ss_pred HHHHH
Q 006031 637 WQVLK 641 (664)
Q Consensus 637 ~ev~~ 641 (664)
.|+++
T Consensus 321 ~~~l~ 325 (332)
T 3qd2_B 321 TDIIE 325 (332)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99986
No 80
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.7e-41 Score=343.56 Aligned_cols=250 Identities=23% Similarity=0.345 Sum_probs=194.5
Q ss_pred hccccccCceeEEEEEEcC----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 5789999999999998643 56799999865322 123567899999999999999999999984 56789999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~- 543 (664)
++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 98 TLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp TTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred CCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 99999999963 234689999999999999999999999 999999999999999999999999999987654321
Q ss_pred --CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 544 --DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 544 --~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
....+++.|+|||.+. ...++.++||||||+++|||++ |+.||... ...++...+...... ..+...+..+.+
T Consensus 173 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~pf~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~ 248 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERL-PMPPNCPPTLYS 248 (281)
T ss_dssp ------CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCC-CCCTTCCHHHHH
T ss_pred ccccCCCcccccChhhcc-cCCCCCccCchHHHHHHHHHHhcCCCCCCcC--CHHHHHHHHHcCCCC-CCCCCCCHHHHH
Confidence 2234677899999986 5678999999999999999997 99999764 233444433322211 122334556899
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 621 VAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
++.+||+.+|++|||+.|+++.|+++.+.
T Consensus 249 li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 249 LMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998654
No 81
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-41 Score=353.06 Aligned_cols=242 Identities=18% Similarity=0.245 Sum_probs=199.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... ++..||+|.+.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~ 86 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence 467999999999999965 58899999986432 24567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC--CCCeEEeeccccccccCCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP--DFEACLADYCLTALTADSLQ-D 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~~-~ 544 (664)
+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 87 ~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 87 DIFERINT----SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp BHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99999953 234689999999999999999999999 9999999999999987 78999999999987644321 2
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~ 622 (664)
...+++.|+|||.+. ...++.++|||||||++|||++|+.||... ...++...+........ .....+..+.+++
T Consensus 162 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEESCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHH
T ss_pred cccCChhhcCcHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCChhhhccCCHHHHHHH
Confidence 345789999999986 556789999999999999999999999763 22333333322222211 1123345689999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+||+.||++|||+.|+++
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999987
No 82
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=358.71 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=197.3
Q ss_pred ccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
+.||+|+||.||+|.. .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 5799999999999986 4688999999975433 345789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe--CCCCCeEEeeccccccccCCC-CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL--GPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl--~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++...... ...
T Consensus 173 L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 173 LFDRIID----ESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp EHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 9999863 234689999999999999999999999 99999999999999 677899999999998765432 234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhH-HHHHHhhccCC-CchhHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEM-MNWVRSAREDD-GAEDERLGMLLEVAI 623 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~l~~ 623 (664)
..||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+. ........... .........+.+++.
T Consensus 248 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 324 (373)
T 2x4f_A 248 NFGTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324 (373)
T ss_dssp CCSSCTTCCHHHHT-TCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred ccCCCcEeChhhcc-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence 56899999999986 667899999999999999999999999753 22222 22222211111 112234566899999
Q ss_pred HcccCCCCCCCCHHHHHH--HHHhh
Q 006031 624 ACNSASPEQRPTMWQVLK--MLQEI 646 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~--~L~~i 646 (664)
+||+.+|++|||+.|+++ .+++.
T Consensus 325 ~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 325 KLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp TTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHcCCChhhCCCHHHHhcCcCcCCC
Confidence 999999999999999987 44443
No 83
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-40 Score=346.50 Aligned_cols=260 Identities=19% Similarity=0.282 Sum_probs=200.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 46899999999999996 57899999999754322 12356788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC--C
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--D 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--~ 544 (664)
|+|.+++.... .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........ .
T Consensus 117 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 194 (310)
T 2wqm_A 117 GDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194 (310)
T ss_dssp CBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred CCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcccc
Confidence 99999985321 1235689999999999999999999999 999999999999999999999999999876544321 2
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...++..|+|||.+. ...++.++||||||+++|||++|+.||.........+...+.............+..+.+++.+
T Consensus 195 ~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (310)
T 2wqm_A 195 SLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM 273 (310)
T ss_dssp ----CCSSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHH
T ss_pred ccCCCeeEeChHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHH
Confidence 345789999999987 5678999999999999999999999997643333344443333222222223345568999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
||+.||++|||+.||++.|++++....
T Consensus 274 ~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 274 CINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999987654
No 84
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-41 Score=351.47 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=200.0
Q ss_pred hccccccCceeEEEEEEc-CCeE----EEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLI----VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~----vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|... ++.. ||+|.+..... ....+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 468999999999999964 3443 78887754322 233456778999999999999999999986 5678999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 96 LPLGSLLDHVRQ----HRGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp CTTCBSHHHHHS----SGGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCCHHHHHHH----ccccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999963 235789999999999999999999999 999999999999999999999999999987644322
Q ss_pred ----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 544 ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 544 ----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
....++..|+|||.+. ...++.++|||||||++|||+| |+.||.... ..++...+....... .+......+
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 246 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIH-FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--LAEVPDLLEKGERLA-QPQICTIDV 246 (325)
T ss_dssp CCC-----CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--TTHHHHHHHTTCBCC-CCTTBCTTT
T ss_pred cccccCCCCcccccChHHhc-cCCCChhhHhHHhHHHHHHHHhCCCCCccccC--HHHHHHHHHcCCCCC-CCCcCcHHH
Confidence 2345678999999987 5678999999999999999999 999997642 234444443332221 122233458
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 247 ~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 247 YMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp THHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 8999999999999999999999999998543
No 85
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-40 Score=343.56 Aligned_cols=244 Identities=21% Similarity=0.367 Sum_probs=200.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec----CCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA----KEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lV~e~ 463 (664)
.+.||+|+||.||+|.. .++..||+|.+..........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 35799999999999986 457889999997655544456789999999999999999999999865 3458999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeC-CCCCeEEeeccccccccC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLG-PDFEACLADYCLTALTAD 540 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~-~~~~~ki~DfGla~~~~~ 540 (664)
+++|+|.+++.. ...+++..+..|+.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++.....
T Consensus 111 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 111 MTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred cCCCCHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 999999999953 35689999999999999999999998 7 99999999999997 789999999999987665
Q ss_pred CCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 541 ~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
.......+++.|+|||.+. ..++.++||||||+++|||++|+.||.... ........+.............+..+.+
T Consensus 185 ~~~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKE 261 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred cccccccCCcCcCCHHHHh--ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-cHHHHHHHHhccCCccccCCCCCHHHHH
Confidence 5544567899999999875 458999999999999999999999997532 2223333333322222222233356899
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 006031 621 VAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
++.+||+.+|++|||+.|+++
T Consensus 262 li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 262 IIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCCCHHHHhh
Confidence 999999999999999999985
No 86
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=342.35 Aligned_cols=257 Identities=25% Similarity=0.398 Sum_probs=206.1
Q ss_pred hccccccCceeEEEEEEcC----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCce-EEEEec
Q 006031 389 AELLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEER-LLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lV~e~ 463 (664)
.++||+|+||+||+|...+ +..||+|.+..... ....+.+.+|++++++++||||+++++++.+.+.. ++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 4789999999999998533 33799999865322 12346789999999999999999999999876665 999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-- 541 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 541 (664)
+.+|+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 105 MCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999963 345689999999999999999999999 9999999999999999999999999999755332
Q ss_pred ----CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHH
Q 006031 542 ----LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617 (664)
Q Consensus 542 ----~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (664)
......++..|+|||.+. ...++.++||||||+++|||+||..|+... ....++...+....... .+...+..
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 256 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRH-IDPFDLTHFLAQGRRLP-QPEYCPDS 256 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHT-TCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-SCGGGHHHHHHTTCCCC-CCTTCCHH
T ss_pred cccccCcCCCCCccccChhhhc-cCCCChhhchhhHHHHHHHHhhCCCCCCcc-CCHHHHHHHhhcCCCCC-CCccchHH
Confidence 122345688999999987 667899999999999999999965554332 23344444444333222 22233456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCCC
Q 006031 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654 (664)
Q Consensus 618 l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~ 654 (664)
+.+++.+||+.+|++|||+.|++++|+++......+.
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 8999999999999999999999999999988765443
No 87
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-40 Score=347.30 Aligned_cols=256 Identities=22% Similarity=0.343 Sum_probs=207.4
Q ss_pred hccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 57899999999999985 3578999999975432 12357799999999999 9999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeE
Q 006031 462 DYQPNGSLFSLIHGSKS-------------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC 528 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~k 528 (664)
||+++|+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~k 185 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITK 185 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETTTEEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCCCCEE
Confidence 99999999999975321 1123589999999999999999999999 999999999999999999999
Q ss_pred EeeccccccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHh
Q 006031 529 LADYCLTALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRS 603 (664)
Q Consensus 529 i~DfGla~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 603 (664)
|+|||+++....... ....+++.|+|||.+. ...++.++||||||+++|||+| |+.||...... ......+..
T Consensus 186 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~ 263 (313)
T 1t46_A 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYKMIKE 263 (313)
T ss_dssp ECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHHHHHHHH
T ss_pred EccccccccccccccceeccCCCCcceeeChHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHHHHHhcc
Confidence 999999987654322 1233567899999886 5678999999999999999999 99999764322 233333332
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
..... .+...+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 264 ~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 264 GFRML-SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp TCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC-CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 22221 2223445689999999999999999999999999988654
No 88
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-40 Score=341.56 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.5
Q ss_pred hccccccCceeEEEEEEcC----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEe-cCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQ-AKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~-~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|...+ ...||+|.+..... ....+.+.+|++++++++||||++++++|. ..+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 4689999999999998643 34689998865322 123467899999999999999999999865 45678999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL- 542 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 542 (664)
+++|+|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 109 ~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 109 MKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp CTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 999999999963 345689999999999999999999999 99999999999999999999999999998654322
Q ss_pred -----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHH
Q 006031 543 -----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG 616 (664)
Q Consensus 543 -----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (664)
.....+++.|+|||.+. ...++.++||||||+++|||++ |.+||.... ..+............ .+...+.
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~ 259 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRRLL-QPEYCPD 259 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC--TTTHHHHHHTTCCCC-CCTTCCH
T ss_pred hccccccCCCCCccccChHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCCccCC--HHHHHHHHhcCCCCC-CCccCCH
Confidence 12234677899999986 5678999999999999999999 555665432 223333332222221 1222345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCC
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 653 (664)
.+.+++.+||+.+|++|||+.|+++.|+++......+
T Consensus 260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 6899999999999999999999999999998766543
No 89
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.5e-40 Score=344.73 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=200.4
Q ss_pred hccccccCceeEEEEEE-----cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC--CceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK--EERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 461 (664)
.+.||+|+||.||+|.+ .+++.||+|++..... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 46899999999999984 4689999999975432 34567899999999999999999999999876 6689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++|+|.++++. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 105 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 105 EFLPSGSLKEYLPK----NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp ECCTTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EeCCCCcHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999953 234589999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC----------CChhhHHHHHHhhcc
Q 006031 542 L-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSF----------LVPNEMMNWVRSARE 606 (664)
Q Consensus 542 ~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~----------~~~~~~~~~~~~~~~ 606 (664)
. .....+|..|+|||.+. ...++.++||||||+++|||+||+.|+.... ...............
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLM-QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred CcceeccCCCCCCccccCCeeec-CCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence 2 22345788899999886 5677899999999999999999999864321 001111111111111
Q ss_pred --CCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 006031 607 --DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647 (664)
Q Consensus 607 --~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 647 (664)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 259 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 259 GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11122334456899999999999999999999999999874
No 90
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-40 Score=352.57 Aligned_cols=244 Identities=24% Similarity=0.343 Sum_probs=197.4
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999995 67899999998654321 1223578899999999999999999999999999999999997
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 138 g~l~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--~~~ 210 (348)
T 1u5q_A 138 GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--NSF 210 (348)
T ss_dssp EEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--CCC
T ss_pred CCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--Ccc
Confidence 688888853 235689999999999999999999999 9999999999999999999999999999876543 335
Q ss_pred CCCCcccCcccccc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 547 PDNLLYKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 547 ~~~~~y~aPE~~~~--~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
.||+.|+|||.+.. ...++.++|||||||++|||+||+.||..... ...+...... ..........+..+.+++.+
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQN-ESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHS-CCCCCCCTTSCHHHHHHHHH
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhc-CCCCCCCCCCCHHHHHHHHH
Confidence 78999999998742 45689999999999999999999999875321 1122222221 11111222334568899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~ 642 (664)
||+.+|++|||+.|+++.
T Consensus 289 ~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HcccChhhCcCHHHHhhC
Confidence 999999999999999753
No 91
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=351.88 Aligned_cols=259 Identities=20% Similarity=0.280 Sum_probs=204.0
Q ss_pred HhccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEE
Q 006031 388 SAELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLI 460 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 460 (664)
..+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 127 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEE
Confidence 357899999999999996 2467899999975432 23456789999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC
Q 006031 461 YDYQPNGSLFSLIHGSKST------------------RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG 522 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~ 522 (664)
|||+++|+|.+++...... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++
T Consensus 128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVT 206 (344)
T ss_dssp EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGGEEEE
T ss_pred EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEEc
Confidence 9999999999999753211 113489999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhH
Q 006031 523 PDFEACLADYCLTALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEM 597 (664)
Q Consensus 523 ~~~~~ki~DfGla~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~ 597 (664)
.++.+||+|||++........ ....+++.|+|||.+. ...++.++|||||||++|||+| |+.||..... ...+
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~ 284 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANF 284 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHH
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc-cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-HHHH
Confidence 999999999999986543321 1233577899999886 5678999999999999999998 9999976432 2233
Q ss_pred HHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 598 MNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
...+...... ..+...+..+.+++.+||+.+|++|||+.|+++.|+.+.....
T Consensus 285 ~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 285 YKLIQNGFKM-DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp HHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred HHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 3333332222 1222334568999999999999999999999999999876554
No 92
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-40 Score=354.48 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=187.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||++... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 101 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCC
Confidence 468999999999999965 688999999965432 3467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC--eEEeeccccccccCC-CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE--ACLADYCLTALTADS-LQD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~~~~~-~~~ 544 (664)
+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..... ...
T Consensus 102 ~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 102 ELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 99999953 34699999999999999999999999 9999999999999987766 999999999753322 223
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChh--hHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPN--EMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
...||+.|+|||.+.+....+.++|||||||++|||++|+.||........ .....+................+.+++
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 255 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHH
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHH
Confidence 456899999999987433334459999999999999999999976432211 222222211111111112345688999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.+||+.+|++|||+.|+++.
T Consensus 256 ~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 256 SRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHSCSCTTTSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHHhC
Confidence 99999999999999999864
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=353.38 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=200.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcc-ccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASK-LAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||++... +++.||+|.+.... ......+.+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 478999999999999965 57899999986543 2234567889999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC-CCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-~~~~ 545 (664)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 100 g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 173 (384)
T 4fr4_A 100 GDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173 (384)
T ss_dssp EEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCCceec
Confidence 999999963 35699999999999999999999999 9999999999999999999999999999876443 2345
Q ss_pred CCCCCcccCcccccc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-hhhHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-PNEMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~--~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
..||+.|+|||++.. ...++.++|||||||++|||++|+.||...... ..++......... ..+......+.+++
T Consensus 174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li 251 (384)
T 4fr4_A 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLL 251 (384)
T ss_dssp CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHH
T ss_pred cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHH
Confidence 679999999999863 234788999999999999999999999754322 2233333222221 22233445689999
Q ss_pred HHcccCCCCCCCC-HHHHHH
Q 006031 623 IACNSASPEQRPT-MWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt-~~ev~~ 641 (664)
.+||+.+|++||+ +.++.+
T Consensus 252 ~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 252 KKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHSCSSGGGSCCSHHHHHT
T ss_pred HHHhcCCHhHhcccHHHHHc
Confidence 9999999999998 666654
No 94
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-40 Score=342.55 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=202.0
Q ss_pred cccccCceeEEEEEE---cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 391 LLGKGSLGTTYKAVL---DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 391 ~lG~G~fg~Vy~~~~---~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.||+|+||.||+|.. ..++.||||+++.........+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999964 3468899999976544333467899999999999999999999999 567889999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC----
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---- 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---- 543 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 103 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (291)
T 1xbb_A 103 PLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176 (291)
T ss_dssp EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccc
Confidence 99999963 34589999999999999999999999 999999999999999999999999999986644321
Q ss_pred -CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 544 -DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
....++..|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+...... ..+...+..+.++
T Consensus 177 ~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~l 252 (291)
T 1xbb_A 177 QTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM-GCPAGCPREMYDL 252 (291)
T ss_dssp ----CCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-CCCTTCCHHHHHH
T ss_pred cccCCCCceeeChHHhc-cCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence 1234568899999986 5667899999999999999999 99999763 233444444333222 2223345568999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 622 AIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
+.+||+.+|++||++.|+++.|+++-...
T Consensus 253 i~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 253 MNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986543
No 95
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-40 Score=347.18 Aligned_cols=252 Identities=21% Similarity=0.390 Sum_probs=201.0
Q ss_pred hccccccCceeEEEEEEcC-----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLDN-----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||.||+|.... +..||+|.++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 4689999999999998643 34699999875432 22345789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 128 ~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 128 MENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp CTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred CCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999963 235689999999999999999999999 999999999999999999999999999987644321
Q ss_pred -----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHH
Q 006031 544 -----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617 (664)
Q Consensus 544 -----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (664)
....++..|+|||.+. ...++.++|||||||++|||+| |+.||... ...++...+....... .+...+..
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~~-~~~~~~~~ 278 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFRLP-TPMDCPSA 278 (333)
T ss_dssp --------CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC-CCTTCBHH
T ss_pred cccccCCCCccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCcCC-CcccCCHH
Confidence 1234577899999986 6778999999999999999999 99999753 2334444443322211 22234456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 618 l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 279 l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 279 IYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999986554
No 96
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.8e-40 Score=337.80 Aligned_cols=251 Identities=27% Similarity=0.407 Sum_probs=206.3
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++||||+++++++. .+..++||||+++++
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~ 93 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGS 93 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCB
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCC
Confidence 46899999999999999989999999986543 35678999999999999999999999986 456899999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---CC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ---DD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---~~ 545 (664)
|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........ ..
T Consensus 94 L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 94 LVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 99999531 123689999999999999999999999 999999999999999999999999999987654321 23
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+. ...++.++||||||+++|||++ |+.||... ...++...+...... ..+...+..+.+++.+
T Consensus 170 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 245 (279)
T 1qpc_A 170 AKFPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRM-VRPDNCPEELYQLMRL 245 (279)
T ss_dssp CCCCTTTSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHH
T ss_pred CCCccCccChhhhc-cCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCC-CCcccccHHHHHHHHH
Confidence 34677899999986 5678899999999999999999 99998753 233333333322211 1222344568999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 625 CNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
||+.+|++|||+.++++.|+++.....
T Consensus 246 ~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 246 CWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999876543
No 97
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.4e-40 Score=344.13 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=198.5
Q ss_pred HhccccccCceeEEEEEEc----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc-----eE
Q 006031 388 SAELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE-----RL 458 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-----~~ 458 (664)
..+.||+|+||.||+|... .+..||+|.++.........+.+.+|++++++++||||+++++++.+.+. .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 3568999999999999864 35589999997654433345678999999999999999999999987553 49
Q ss_pred EEEecCCCCCHHHHhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 459 LIYDYQPNGSLFSLIHGSKS-TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 459 lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
+||||+++|+|.+++..... .....+++..++.|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Dfg~~~~ 196 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSCSCC--
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeecCccee
Confidence 99999999999999853221 2345699999999999999999999999 999999999999999999999999999976
Q ss_pred ccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 538 TADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 538 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
..... .....+++.|+|||.+. ...++.++||||||+++|||++ |+.||... ...++...+...... ..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~ 272 (313)
T 3brb_A 197 IYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGV--QNHEMYDYLLHGHRL-KQPE 272 (313)
T ss_dssp --------------CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCCC-CCBT
T ss_pred cccccccCcccccCCCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHHcCCCC-CCCc
Confidence 54322 12234678899999986 6778999999999999999999 88998754 233444433332222 1223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..+..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 273 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 34456899999999999999999999999999987654
No 98
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.1e-40 Score=345.39 Aligned_cols=248 Identities=20% Similarity=0.328 Sum_probs=190.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.. .+++.||+|+++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 46799999999999985 4688999999875442 2344678899999999999999999999999999999999998 5
Q ss_pred CHHHHhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CC
Q 006031 468 SLFSLIHGSK-STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QD 544 (664)
Q Consensus 468 sL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~ 544 (664)
+|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS 166 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCC
Confidence 9999886321 12234689999999999999999999999 99999999999999999999999999998764332 23
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH-HhhccCC---------------
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV-RSAREDD--------------- 608 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~--------------- 608 (664)
...+|+.|+|||.+.+...++.++|||||||++|||+||+.||.... ..+....+ .......
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 244 (317)
T 2pmi_A 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244 (317)
T ss_dssp CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT
T ss_pred CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhhhhhhhhccc
Confidence 45689999999998755678999999999999999999999997642 22222221 1111000
Q ss_pred --------C--------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 --------G--------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 --------~--------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
. ........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 00122346899999999999999999999986
No 99
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=344.74 Aligned_cols=241 Identities=21% Similarity=0.237 Sum_probs=200.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 468999999999999965 689999999975432 224567788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 91 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-~~~ 163 (318)
T 1fot_A 91 GELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-YTL 163 (318)
T ss_dssp CBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-CCC
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCcc-ccc
Confidence 999999963 34689999999999999999999999 99999999999999999999999999998765432 346
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
.||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...+....+... ....+......+.+++.+|+
T Consensus 164 ~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL 238 (318)
T 1fot_A 164 CGTPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNA--ELRFPPFFNEDVKDLLSRLI 238 (318)
T ss_dssp CSCTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHT
T ss_pred cCCccccCHhHhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHh
Confidence 7899999999987 567899999999999999999999999753 222222222211 11122233456899999999
Q ss_pred cCCCCCCC-----CHHHHHH
Q 006031 627 SASPEQRP-----TMWQVLK 641 (664)
Q Consensus 627 ~~~P~~RP-----t~~ev~~ 641 (664)
+.+|++|| ++.|+++
T Consensus 239 ~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 239 TRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred ccCHHHcCCCcCCCHHHHhc
Confidence 99999999 8888874
No 100
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=350.70 Aligned_cols=241 Identities=20% Similarity=0.271 Sum_probs=183.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 133 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG 133 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCC
Confidence 468999999999999976 57889999987532 3467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeeccccccccCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTALTADSL-Q 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~~-~ 543 (664)
+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...... .
T Consensus 134 ~L~~~l~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 134 ELFDRIV-----EKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp BHHHHHT-----TCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999995 335689999999999999999999999 9999999999999975 8999999999998764432 2
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 621 (664)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||..... ...+...+....... ......+..+.++
T Consensus 208 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 285 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERG-DQFMFRRILNCEYYFISPWWDEVSLNAKDL 285 (349)
T ss_dssp -----CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-HHHHHHHHHTTCCCCCTTTTTTSCHHHHHH
T ss_pred ccccCCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-cHHHHHHHHhCCCccCCchhhhCCHHHHHH
Confidence 3456899999999987 56789999999999999999999999975432 222222222211111 1123345568999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.||++|||+.|+++
T Consensus 286 i~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 286 VRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999986
No 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.2e-40 Score=348.98 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=207.7
Q ss_pred HhccccccCceeEEEEEEc--------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceE
Q 006031 388 SAELLGKGSLGTTYKAVLD--------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERL 458 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 458 (664)
..+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 117 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence 3578999999999999863 467899999975432 12346788999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCe
Q 006031 459 LIYDYQPNGSLFSLIHGSKST-----------RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEA 527 (664)
Q Consensus 459 lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ 527 (664)
+||||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCE
T ss_pred EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcCCCCE
Confidence 999999999999999753211 123589999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCC----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHH
Q 006031 528 CLADYCLTALTADSL----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602 (664)
Q Consensus 528 ki~DfGla~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 602 (664)
||+|||+++...... .....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+.
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~ 273 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLK 273 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhc-CCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHHHHHHHh
Confidence 999999998654432 12344678899999886 5668999999999999999999 99998753 2334444433
Q ss_pred hhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 603 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
...... .+...+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 274 ~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 274 EGHRMD-KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cCCCCC-CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 332221 223344568999999999999999999999999999976554
No 102
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.2e-40 Score=341.05 Aligned_cols=251 Identities=22% Similarity=0.366 Sum_probs=209.1
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 94 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 94 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence 4689999999999999764 8899999986533 35678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCC---
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--- 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~--- 544 (664)
+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 95 ~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 95 NLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp EHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred cHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 999999642 335689999999999999999999999 9999999999999999999999999999876543321
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
...+++.|+|||.+. ...++.++||||||+++|||++ |+.||... ....+...+...... ..+...+..+.+++.
T Consensus 171 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~ 246 (288)
T 3kfa_A 171 GAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRM-ERPEGCPEKVYELMR 246 (288)
T ss_dssp TEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCCC-CCCTTCCHHHHHHHH
T ss_pred CCccccCcCChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhccCCC-CCCCCCCHHHHHHHH
Confidence 223567899999986 5678999999999999999999 99998764 233444444333222 122334456899999
Q ss_pred HcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 624 ACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
+||+.+|++|||+.|+++.|+++....
T Consensus 247 ~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 247 ACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 999999999999999999999886543
No 103
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=339.54 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=205.5
Q ss_pred ccccccCceeEEEEEEc---CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLD---NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
+.||+|+||.||+|... ++..||+|+++.... ....+.+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999853 678899999975422 23456789999999999999999999999 55679999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 94 ~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 94 GPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 999999953 345699999999999999999999999 999999999999999999999999999987643221
Q ss_pred --CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 544 --DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 544 --~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+...... ..+...+..+.+
T Consensus 169 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~ 244 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKRM-ECPPECPPELYA 244 (287)
T ss_dssp CCCSSCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CTHHHHHHHHTTCCC-CCCTTCCHHHHH
T ss_pred ccccccccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHhcCCcC-CCCCCcCHHHHH
Confidence 2234678899999986 5678999999999999999999 99999764 233444444333222 222344566899
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 621 VAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
++.+||+.+|++||++.|+++.|+++....
T Consensus 245 li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 245 LMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999986544
No 104
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-40 Score=350.66 Aligned_cols=243 Identities=24% Similarity=0.340 Sum_probs=197.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+++++.++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 46899999999999996 67889999998643221 223467899999999999999999999999999999999999 7
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....... ...
T Consensus 93 g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~ 166 (336)
T 3h4j_B 93 GELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT 166 (336)
T ss_dssp EEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccc
Confidence 899999853 34699999999999999999999999 99999999999999999999999999998765443 334
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|+|||.+.+....+.++|||||||++|||++|+.||....... +...+... ....+...+..+.+++.+|
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~~~~i~~~--~~~~p~~~s~~~~~li~~~ 242 (336)
T 3h4j_B 167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN--LFKKVNSC--VYVMPDFLSPGAQSLIRRM 242 (336)
T ss_dssp CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT--CBCCCCSS--CCCCCTTSCHHHHHHHHTT
T ss_pred ccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH--HHHHHHcC--CCCCcccCCHHHHHHHHHH
Confidence 5789999999998744445789999999999999999999997642211 00000000 0112223345688999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 006031 626 NSASPEQRPTMWQVLKM 642 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~~ 642 (664)
|+.||++|||+.|+++.
T Consensus 243 L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 243 IVADPMQRITIQEIRRD 259 (336)
T ss_dssp SCSSGGGSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHHhC
Confidence 99999999999999763
No 105
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=343.81 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=195.0
Q ss_pred HhccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcC--CCCCCcccceEEEecC----CceEEEE
Q 006031 388 SAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGG--LRHPNLVPLRAYFQAK----EERLLIY 461 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~----~~~~lV~ 461 (664)
..+.||+|+||.||+|... ++.||||++... ....+.+|.+++.. ++||||+++++++... +..++||
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 114 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence 3578999999999999976 789999998532 23444455555544 4999999999999877 6789999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW-------RLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
||+++|+|.++++. ..+++..+..++.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+
T Consensus 115 e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 115 DYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp CCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred eccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 99999999999953 35899999999999999999999752 899999999999999999999999999
Q ss_pred cccccCCCC------CCCCCCCcccCccccccCCCCCc------hhhHHHHHHHHHHHHcC----------CCCCCCCCC
Q 006031 535 TALTADSLQ------DDDPDNLLYKAPETRNASHQATS------KSDVYSFGVLLLELLTG----------KPPSQHSFL 592 (664)
Q Consensus 535 a~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~------ksDVwSfGvvl~elltG----------~~P~~~~~~ 592 (664)
++....... ....||+.|+|||.+. ....+. ++|||||||++|||+|| +.||.....
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHT-TCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcc-cccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 976543322 1346899999999986 333333 49999999999999999 666654332
Q ss_pred Chh---hHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 593 VPN---EMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 593 ~~~---~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
... .....+........ ...+.+..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 222 22222222111111 13467788999999999999999999999999999998654
No 106
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.3e-40 Score=340.23 Aligned_cols=244 Identities=25% Similarity=0.324 Sum_probs=201.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 467999999999999964 5889999999765543344577889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC---eEEeeccccccccCCCC-
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTALTADSLQ- 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~~~~~~- 543 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++........
T Consensus 91 ~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (284)
T 3kk8_A 91 ELFEDIVA-----REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164 (284)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence 99998853 34689999999999999999999999 9999999999999987655 99999999977654432
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 621 (664)
....+++.|+|||.+. ...++.++||||||+++|||++|+.||... ........+....... .........+.++
T Consensus 165 ~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (284)
T 3kk8_A 165 HGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241 (284)
T ss_dssp CCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred cCCCCCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCCchhhcccCHHHHHH
Confidence 3456899999999987 567899999999999999999999999753 2233333332222111 1112344568999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.+|++|||+.|+++
T Consensus 242 i~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 242 IDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHcccChhhCCCHHHHhc
Confidence 99999999999999999987
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=355.24 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=199.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg 133 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence 468999999999999965 688999999865432 23467899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC--CCCeEEeeccccccccCCC-CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP--DFEACLADYCLTALTADSL-QD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~-~~ 544 (664)
+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++...... ..
T Consensus 134 ~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 134 ELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp BHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred cHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999953 234689999999999999999999999 9999999999999974 5789999999998765432 22
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC--CCchhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--DGAEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~ 622 (664)
...+|+.|+|||++. ...++.++|||||||++|||+||+.||... ...+....+...... .......+..+.+++
T Consensus 209 ~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 209 VTTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCccccccCCHHHHHHH
Confidence 346899999999987 567899999999999999999999999763 222333333222111 112223455689999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.+||+.||++|||+.|+++.
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHcCCChhHCcCHHHHhhC
Confidence 99999999999999999863
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=343.15 Aligned_cols=246 Identities=22% Similarity=0.296 Sum_probs=195.0
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 467999999999999975 4889999998665443333567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 88 ~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (311)
T 4agu_A 88 VLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD 161 (311)
T ss_dssp HHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred hHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCC
Confidence 99999852 35689999999999999999999999 99999999999999999999999999998765332 233
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-----------------
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD----------------- 608 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----------------- 608 (664)
..++..|+|||.+.+...++.++||||||+++|||+||+.||.... ..+....+.......
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhcccccccccccccccccccC
Confidence 5688999999998755778999999999999999999999997642 222211111110000
Q ss_pred ------C------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 609 ------G------AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 609 ------~------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
. ........+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 001234458899999999999999999999853
No 109
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.9e-40 Score=334.23 Aligned_cols=245 Identities=21% Similarity=0.263 Sum_probs=202.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 468999999999999975 688999999865433 234578999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC----CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQ 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 543 (664)
+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...... ..
T Consensus 91 ~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 91 ELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp EGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred cHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999985 235689999999999999999999999 9999999999999999999999999999765322 12
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....++..|+|||.+......+.++||||||+++|||++|+.||............+....... ......+..+.+++.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~ 243 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLALLH 243 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS-TTGGGSCHHHHHHHH
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc-CchhhcCHHHHHHHH
Confidence 3456889999999987444457899999999999999999999986543333444444322211 122334556889999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 006031 624 ACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~ 641 (664)
+||+.+|++|||+.|+++
T Consensus 244 ~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 244 KILVENPSARITIPDIKK 261 (276)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHCCCCchhCCCHHHHhc
Confidence 999999999999999976
No 110
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.6e-40 Score=354.19 Aligned_cols=239 Identities=18% Similarity=0.242 Sum_probs=193.0
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.++||+|+||+||+|+.. +++.||+|+++...... ...+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 468999999999999965 57899999997654322 2234577888888776 89999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 137 gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~ 210 (396)
T 4dc2_A 137 GGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210 (396)
T ss_dssp TCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcc
Confidence 9999999953 34699999999999999999999999 999999999999999999999999999985322 233
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-------hhhHHHHHHhhccCCCchhHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-------PNEMMNWVRSAREDDGAEDERLG 616 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 616 (664)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+.+.+.... ...+.....
T Consensus 211 ~~~~gt~~Y~aPE~l~-~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~ 287 (396)
T 4dc2_A 211 STFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSV 287 (396)
T ss_dssp CCCCBCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC--CCCCTTSCH
T ss_pred ccccCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc--cCCCCcCCH
Confidence 4567899999999987 567899999999999999999999999643211 112222222211 122233445
Q ss_pred HHHHHHHHcccCCCCCCCCH
Q 006031 617 MLLEVAIACNSASPEQRPTM 636 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~ 636 (664)
.+.+++.+||+.||++||++
T Consensus 288 ~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 288 KAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHHHHHhcCCHhHcCCC
Confidence 68999999999999999985
No 111
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=345.93 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=198.1
Q ss_pred hccccccCceeEEEEEEc-CCeE----EEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLI----VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~----vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||.||+|... ++.. ||+|.+.... .....+.+.+|++++++++||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEe
Confidence 468999999999999954 4443 5777775432 234678899999999999999999999999865 48899999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 98 MPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred cCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999999974 235689999999999999999999999 999999999999999999999999999987543321
Q ss_pred ----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 544 ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 544 ----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
....+++.|+|||.+. ...++.++|||||||++|||++ |+.||... ...++...+....... .+...+..+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~l 248 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLP-QPPICTIDV 248 (327)
T ss_dssp -------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCCC-CCTTBCHHH
T ss_pred cccccCCCccccccCHHHHc-CCCCChHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCC-CCccCCHHH
Confidence 2234677899999987 6778999999999999999999 99999764 2334444443332222 222344568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 249 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 249 YMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998643
No 112
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-40 Score=338.63 Aligned_cols=243 Identities=27% Similarity=0.414 Sum_probs=197.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... ++..||+|++...... ......+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 468999999999999865 5678999998643321 13456789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 94 ~~l~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 167 (279)
T 3fdn_A 94 GTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167 (279)
T ss_dssp EEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence 999999953 24689999999999999999999998 999999999999999999999999999876655554556
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
.++..|+|||.+. ...++.++||||||+++|||++|+.||... ...+....+..... ..+......+.+++.+||
T Consensus 168 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l 242 (279)
T 3fdn_A 168 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEF--TFPDFVTEGARDLISRLL 242 (279)
T ss_dssp CCCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHC
T ss_pred CCCCCccCHhHhc-cCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhCCC--CCCCcCCHHHHHHHHHHh
Confidence 7899999999987 567889999999999999999999999753 22222222222211 122233456889999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 006031 627 SASPEQRPTMWQVLKM 642 (664)
Q Consensus 627 ~~~P~~RPt~~ev~~~ 642 (664)
+.+|++|||+.|+++.
T Consensus 243 ~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 243 KHNPSQRPMLREVLEH 258 (279)
T ss_dssp CSSGGGSCCHHHHHHC
T ss_pred ccChhhCCCHHHHhhC
Confidence 9999999999999964
No 113
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=352.32 Aligned_cols=252 Identities=17% Similarity=0.197 Sum_probs=194.9
Q ss_pred hccccccCceeEEEEEEc----CCeEEEEEEccCccccC---------CcHHHHHHHHHHHcCCCCCCcccceEEEec--
Q 006031 389 AELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAG---------TSNEMYEQHMESVGGLRHPNLVPLRAYFQA-- 453 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~---------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-- 453 (664)
.+.||+|+||.||+|... .+..||+|++....... .....+.+|+..++.++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 468999999999999975 57889999986543210 012346678889999999999999999987
Q ss_pred --CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC--CeEE
Q 006031 454 --KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF--EACL 529 (664)
Q Consensus 454 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~--~~ki 529 (664)
.+..++||||+ +++|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kL 194 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQVYL 194 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSEEE
T ss_pred CCCcEEEEEEecc-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcEEE
Confidence 67889999999 9999999953 23799999999999999999999999 999999999999998887 9999
Q ss_pred eeccccccccCCCC---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHH
Q 006031 530 ADYCLTALTADSLQ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600 (664)
Q Consensus 530 ~DfGla~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~ 600 (664)
+|||+++....... ....++..|+|||.+. ...++.++|||||||++|||+||+.||.............
T Consensus 195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EeCCCceecccccccccchhccccccCCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 99999976543211 2346899999999987 5678999999999999999999999996533333333332
Q ss_pred HHhhccCCCch-------hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 006031 601 VRSAREDDGAE-------DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKG 648 (664)
Q Consensus 601 ~~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 648 (664)
........... ...+..+.+++.+||+.+|++|||+.+|++.|+++.-
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 22222221110 1234569999999999999999999999999988764
No 114
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3e-40 Score=355.53 Aligned_cols=245 Identities=19% Similarity=0.274 Sum_probs=194.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC--CCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR--HPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765443344578999999999996 5999999999999999999999 568
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC----
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---- 542 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---- 542 (664)
++|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 140 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 140 IDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp EEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 899999963 34689999999999999999999999 999999999999996 5899999999998764332
Q ss_pred CCCCCCCCcccCcccccc----------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 543 QDDDPDNLLYKAPETRNA----------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 543 ~~~~~~~~~y~aPE~~~~----------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
.....||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+...+... .....+.
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~ 291 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN-HEIEFPD 291 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTT-SCCCCCC
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcc-ccCCCCc
Confidence 234568999999998853 13688999999999999999999999975322112222222211 1111122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 292 ~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 223458899999999999999999999864
No 115
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.6e-40 Score=344.98 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=189.4
Q ss_pred hccccccCceeEEEEEE----cCCeEEEEEEccCcccc--CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL----DNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||.||++.. .+++.||+|+++..... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 46899999999999997 47899999999765331 1234567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC-
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS- 541 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~- 541 (664)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 102 YLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp CCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred CCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 9999999999953 34688999999999999999999999 9999999999999999999999999999754322
Q ss_pred -CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 542 -LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 542 -~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...+....+..... ..+......+.+
T Consensus 176 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~--~~p~~~~~~~~~ 250 (327)
T 3a62_A 176 TVTHTFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKL--NLPPYLTQEARD 250 (327)
T ss_dssp ---CTTSSCCTTSCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCC--CCCTTSCHHHHH
T ss_pred ccccccCCCcCccCHhhCc-CCCCCCcccchhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCC--CCCCCCCHHHHH
Confidence 223456899999999987 567899999999999999999999999753 22233222222211 122233456899
Q ss_pred HHHHcccCCCCCCC-----CHHHHHH
Q 006031 621 VAIACNSASPEQRP-----TMWQVLK 641 (664)
Q Consensus 621 l~~~Cl~~~P~~RP-----t~~ev~~ 641 (664)
++.+||+.+|++|| ++.|+++
T Consensus 251 li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 251 LLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 99999999999999 7778765
No 116
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=350.71 Aligned_cols=245 Identities=19% Similarity=0.275 Sum_probs=193.7
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCC--CCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH--PNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||++...+++.||||++..........+.+.+|++++.+++| +||+++++++.+.+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 46899999999999999889999999997654433345778999999999976 999999999999999999999 568
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
|+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 93 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 165 (343)
T 3dbq_A 93 IDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 165 (343)
T ss_dssp EEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccccc
Confidence 899999963 35689999999999999999999999 999999999999997 57899999999987644322
Q ss_pred -CCCCCCCcccCcccccc----------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 544 -DDDPDNLLYKAPETRNA----------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~----------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
....||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+...+.... ....+.
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~ 244 (343)
T 3dbq_A 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH-EIEFPD 244 (343)
T ss_dssp ----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS-CCCCCC
T ss_pred CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc-ccCCcc
Confidence 23568999999998752 256889999999999999999999999754222222222222111 111222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 245 IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 223458899999999999999999999864
No 117
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=353.62 Aligned_cols=242 Identities=20% Similarity=0.243 Sum_probs=195.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.++||+|+||+||+|+.. +++.||+|+++.... .....+.+.+|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999965 588999999975422 223456788899999887 79999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~ 543 (664)
+|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 108 gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 181 (353)
T 3txo_A 108 GGDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181 (353)
T ss_dssp SCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccCCccc
Confidence 9999999953 34699999999999999999999999 9999999999999999999999999999854322 22
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||++. ...++.++|||||||++|||++|+.||... ...++...+..... ..+......+.+++.
T Consensus 182 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~~~~~~~li~ 256 (353)
T 3txo_A 182 ATFCGTPDYIAPEILQ-EMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILNDEV--VYPTWLHEDATGILK 256 (353)
T ss_dssp ----CCGGGCCHHHHH-HHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHH
T ss_pred cccCCCcCeEChhhcC-CCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCC--CCCCCCCHHHHHHHH
Confidence 3456899999999987 567899999999999999999999999753 23333333322221 122334456889999
Q ss_pred HcccCCCCCCCCH------HHHHH
Q 006031 624 ACNSASPEQRPTM------WQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RPt~------~ev~~ 641 (664)
+||+.+|++||++ .|+++
T Consensus 257 ~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 257 SFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999998 66654
No 118
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.2e-40 Score=360.52 Aligned_cols=243 Identities=21% Similarity=0.334 Sum_probs=201.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999975 6899999999654321 23456789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 101 g~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 174 (476)
T 2y94_A 101 GELFDYIC-----KNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 174 (476)
T ss_dssp EEHHHHTT-----SSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCC
T ss_pred CcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhccccccccc
Confidence 99999995 345699999999999999999999999 99999999999999999999999999998765432 334
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..||+.|+|||.+.+....+.++|||||||++|||++|+.||.... ...+...+...... .+......+.+++.+|
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~~~~~--~p~~~s~~~~~Li~~~ 250 (476)
T 2y94_A 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--VPTLFKKICDGIFY--TPQYLNPSVISLLKHM 250 (476)
T ss_dssp CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--SHHHHHHHHTTCCC--CCTTCCHHHHHHHHHH
T ss_pred cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--HHHHHHHHhcCCcC--CCccCCHHHHHHHHHH
Confidence 6789999999998744445789999999999999999999997632 22332222222111 1222345588999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.||++|||+.|+++
T Consensus 251 L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 251 LQVDPMKRATIKDIRE 266 (476)
T ss_dssp TCSSTTTSCCHHHHHT
T ss_pred cCCCchhCcCHHHHHh
Confidence 9999999999999987
No 119
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.5e-40 Score=346.86 Aligned_cols=239 Identities=18% Similarity=0.243 Sum_probs=194.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.+.||+|+||.||+|+.. +++.||+|+++...... ...+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 58899999997654322 2245678899999887 89999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 94 gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~ 167 (345)
T 3a8x_A 94 GGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167 (345)
T ss_dssp SCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCB
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCCCcc
Confidence 9999999953 34689999999999999999999999 999999999999999999999999999986322 223
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-------hhhHHHHHHhhccCCCchhHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-------PNEMMNWVRSAREDDGAEDERLG 616 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 616 (664)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ...+.+.+.... ...+.....
T Consensus 168 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~ 244 (345)
T 3a8x_A 168 STFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSV 244 (345)
T ss_dssp CCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC--CCCCTTSCH
T ss_pred cccCCCccccCccccC-CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC--CCCCCCCCH
Confidence 4467899999999987 567899999999999999999999999653211 112222222211 112233445
Q ss_pred HHHHHHHHcccCCCCCCCCH
Q 006031 617 MLLEVAIACNSASPEQRPTM 636 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~ 636 (664)
.+.+++.+||+.||++||++
T Consensus 245 ~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 245 KAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHHHhcCCHhHCCCC
Confidence 68999999999999999985
No 120
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.1e-40 Score=346.78 Aligned_cols=254 Identities=22% Similarity=0.337 Sum_probs=204.0
Q ss_pred hccccccCceeEEEEEEc-----CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC--CceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK--EERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 461 (664)
.+.||+|+||+||++.+. +++.||||+++.... ....+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 468999999999998753 688999999975422 23356789999999999999999999999874 5689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++|+|.+++.. ..+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 115 e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 115 EYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred ecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999953 2489999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC---------hh----hHHHHHHh
Q 006031 542 L-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV---------PN----EMMNWVRS 603 (664)
Q Consensus 542 ~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~---------~~----~~~~~~~~ 603 (664)
. .....++..|+|||.+. ...++.++||||||+++|||+||+.||...... .. .+...+..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLK-EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCCceeeChHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 2 22345778899999987 567789999999999999999999998642110 00 11111111
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccC
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLM 652 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~ 652 (664)
.. ....+...+..+.+++.+||+.+|++|||+.|+++.|+++.+....
T Consensus 267 ~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 267 GE-RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp TC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred cc-CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 11 1122334456699999999999999999999999999999876643
No 121
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.4e-40 Score=348.07 Aligned_cols=241 Identities=18% Similarity=0.196 Sum_probs=201.0
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 468999999999999965 688999999965432 224567788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 126 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-~~~ 198 (350)
T 1rdq_E 126 GEMFSHLRR-----IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-WTL 198 (350)
T ss_dssp CBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-CCC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc-ccc
Confidence 999999963 24589999999999999999999999 99999999999999999999999999998765432 345
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
.||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++...+..... ..+......+.+++.+||
T Consensus 199 ~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~lL 273 (350)
T 1rdq_E 199 CGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGKV--RFPSHFSSDLKDLLRNLL 273 (350)
T ss_dssp EECGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTCCHHHHHHHHHHS
T ss_pred cCCccccCHHHhc-CCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHh
Confidence 6899999999987 567899999999999999999999999753 22333333322211 122334556899999999
Q ss_pred cCCCCCCCC-----HHHHHH
Q 006031 627 SASPEQRPT-----MWQVLK 641 (664)
Q Consensus 627 ~~~P~~RPt-----~~ev~~ 641 (664)
+.||++||+ +.|+.+
T Consensus 274 ~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 274 QVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred hcCHHhccCCccCCHHHHHh
Confidence 999999998 777764
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.4e-40 Score=336.68 Aligned_cols=242 Identities=20% Similarity=0.308 Sum_probs=177.9
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 36799999999999985 56889999999765432 234668899999999999999999999999999999999999 6
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....... ...
T Consensus 97 ~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 170 (275)
T 2eue_A 97 NELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 170 (275)
T ss_dssp EEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCSSCC-----------
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCChHhEEECCCCCEEEeecccceeccCcccccC
Confidence 788888853 34699999999999999999999999 99999999999999999999999999997654432 233
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..+++.|+|||.+.+....+.++||||||+++|||++|+.||... ....+...+...... .+......+.+++.+|
T Consensus 171 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~ 246 (275)
T 2eue_A 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYT--LPKFLSPGAAGLIKRM 246 (275)
T ss_dssp ----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC--CCTTSCHHHHHHHHHH
T ss_pred CCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC--CCccCCHHHHHHHHHH
Confidence 568999999999874444578999999999999999999999753 222222222222211 2223345588999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006031 626 NSASPEQRPTMWQVLK 641 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~ 641 (664)
|+.||++|||+.|+++
T Consensus 247 l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 247 LIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCSSGGGSCCHHHHTT
T ss_pred hhcCHhHCCCHHHHhh
Confidence 9999999999999975
No 123
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=346.99 Aligned_cols=253 Identities=19% Similarity=0.299 Sum_probs=197.9
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+.||+|+||.||+|...+ .||+|.++.........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 4789999999999999765 49999997654444445668889999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC-------
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS------- 541 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~------- 541 (664)
|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 116 L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~ 189 (319)
T 2y4i_B 116 LYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRED 189 (319)
T ss_dssp HHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC----------CC
T ss_pred HHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccccccc
Confidence 9999963 234689999999999999999999999 999999999999998 679999999998754321
Q ss_pred CCCCCCCCCcccCcccccc--------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhH
Q 006031 542 LQDDDPDNLLYKAPETRNA--------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~--------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (664)
......++..|+|||.+.. ...++.++||||||+++|||++|+.||... ....+...+............
T Consensus 190 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (319)
T 2y4i_B 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMKPNLSQIG 267 (319)
T ss_dssp SCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCCCCCCCSS
T ss_pred ccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCCCCCCcCC
Confidence 1122347889999998763 245788999999999999999999999753 222333322222222211122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 614 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
.+..+.+++.+||+.+|++|||+.|++++|+++.....
T Consensus 268 ~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 268 MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 33458899999999999999999999999999987654
No 124
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-40 Score=347.32 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=193.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCce----EEEEe
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEER----LLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~----~lV~e 462 (664)
.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++...+.. ++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 46899999999999995 678999999997643321 2245788999999999999999999998765543 99999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+++|+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 97 YVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp CCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 9999999999963 34689999999999999999999999 99999999999999999999999999998654432
Q ss_pred C-----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhH-HHHHHhhccCC-CchhHHH
Q 006031 543 Q-----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEM-MNWVRSAREDD-GAEDERL 615 (664)
Q Consensus 543 ~-----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ 615 (664)
. ....|++.|+|||.+. ...++.++|||||||++|||+||+.||.... ..+. ........... ......+
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 247 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--PVSVAYQHVREDPIPPSARHEGLS 247 (311)
T ss_dssp -----------CCTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHCCCCCHHHHSTTCC
T ss_pred cccccccccCcCcccCCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCCCcccccCCCC
Confidence 1 1245899999999987 5678999999999999999999999997532 2222 11111111110 0112234
Q ss_pred HHHHHHHHHcccCCCCCCCC-HHHHHHHHHhhhcc
Q 006031 616 GMLLEVAIACNSASPEQRPT-MWQVLKMLQEIKGA 649 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt-~~ev~~~L~~i~~~ 649 (664)
..+.+++.+||+.||++||+ +.++...+.++...
T Consensus 248 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 248 ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 56899999999999999995 45566677766543
No 125
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-40 Score=350.72 Aligned_cols=241 Identities=22% Similarity=0.300 Sum_probs=198.5
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.+.||+|+||.||+|..+ +++.||+|+++.... .....+.+..|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 589999999975432 223456778888888876 99999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 102 gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 175 (345)
T 1xjd_A 102 GGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175 (345)
T ss_dssp TCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcc
Confidence 9999999953 34689999999999999999999999 999999999999999999999999999986432 233
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++...+..... ..+......+.+++.
T Consensus 176 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~li~ 250 (345)
T 1xjd_A 176 NTFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNP--FYPRWLEKEAKDLLV 250 (345)
T ss_dssp CCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHH
T ss_pred cCCCCCcccCChhhhc-CCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCC--CCCcccCHHHHHHHH
Confidence 4567899999999987 567899999999999999999999999753 23333333332221 122334456899999
Q ss_pred HcccCCCCCCCCHH-HHH
Q 006031 624 ACNSASPEQRPTMW-QVL 640 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~-ev~ 640 (664)
+||+.+|++||++. |+.
T Consensus 251 ~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 251 KLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHSCSSGGGSBTTBSCGG
T ss_pred HHhcCCHhHcCCChHHHH
Confidence 99999999999987 554
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.3e-40 Score=351.74 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=200.1
Q ss_pred hcccccc--CceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKG--SLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.+.||+| +||.||+|... +++.||||++..........+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4689999 99999999975 68999999997655433445778899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC----
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS---- 541 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 541 (664)
+|+|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 110 ~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~ 185 (389)
T 3gni_B 110 YGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185 (389)
T ss_dssp TCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred CCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence 99999999642 234689999999999999999999999 9999999999999999999999999988643211
Q ss_pred -----CCCCCCCCCcccCccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhcc---------
Q 006031 542 -----LQDDDPDNLLYKAPETRNAS-HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE--------- 606 (664)
Q Consensus 542 -----~~~~~~~~~~y~aPE~~~~~-~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--------- 606 (664)
......+|..|+|||.+.+. ..++.++|||||||++|||++|+.||....... .+.........
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (389)
T 3gni_B 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGTVPCLLDTSTIP 264 (389)
T ss_dssp SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT-HHHHC---------------
T ss_pred cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHhcCCCCccccccccc
Confidence 11234688899999998743 568999999999999999999999997643221 11111100000
Q ss_pred ----------------------------------CCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 006031 607 ----------------------------------DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKM--LQEIK 647 (664)
Q Consensus 607 ----------------------------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~ 647 (664)
...........+.+++.+||+.||++|||+.|+++. +++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 000112233568899999999999999999999864 44443
No 127
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=346.68 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=201.1
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEe----cCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQ----AKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~----~~~~~~lV~e~ 463 (664)
.+.||+|+||.||++.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++. .....++||||
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 111 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ--QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH--HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEe
Confidence 47899999999999996 6789999998864322 34567899999999999999999999987 34478999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.+++.... .....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 112 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 112 FKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp CTTCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCCCcHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999999996422 1245799999999999999999999999 999999999999999999999999998875432111
Q ss_pred -----------CCCCCCCcccCccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc
Q 006031 544 -----------DDDPDNLLYKAPETRNASH--QATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610 (664)
Q Consensus 544 -----------~~~~~~~~y~aPE~~~~~~--~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 610 (664)
....+++.|+|||.+.... .++.++||||||+++|||++|+.||.........+......... ...
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~ 268 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS-IPQ 268 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC---CCC
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCC-CCc
Confidence 0123588999999886322 26889999999999999999999986422112222222222111 111
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
....+..+.+++.+||+.+|++|||+.|+++.|+.+.....
T Consensus 269 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 22334568999999999999999999999999999876554
No 128
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-39 Score=339.85 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=201.9
Q ss_pred HhccccccCceeEEEEEEc-CCeEEEEEEccCccccC----CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 388 SAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
..+.||+|+||.||+|... +++.||+|.+....... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 3578999999999999965 58899999997544322 246789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC----CeEEeeccccccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF----EACLADYCLTALT 538 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~~~ 538 (664)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++...
T Consensus 96 ~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 96 LVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp CCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999953 35689999999999999999999999 999999999999999888 7999999999876
Q ss_pred cCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHH
Q 006031 539 ADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERL 615 (664)
Q Consensus 539 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 615 (664)
.... .....+++.|+|||.+. ...++.++||||||+++|||++|+.||... ...+....+........ .....+
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVSYDFDEEFFSHTS 246 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred CccccccccCCCCCccCccccc-CCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcccccChhhhcccC
Confidence 5432 23456899999999986 567899999999999999999999999753 22233332222221111 112234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 616 GMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 247 ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 56899999999999999999999986
No 129
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.3e-40 Score=337.11 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=195.7
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
..+.||+|+||.||++.. .++..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 104 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG 104 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCC
Confidence 357899999999999996 4688999999875442 34568899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCC-
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSL- 542 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~- 542 (664)
|+|.+++.... .....+++..+..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 105 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 105 GELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp CBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred CcHHHHHHhhh-hcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 99999985321 1235689999999999999999999999 99999999999999 456889999999998654432
Q ss_pred CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC-chhHHHHHHHHH
Q 006031 543 QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG-AEDERLGMLLEV 621 (664)
Q Consensus 543 ~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l 621 (664)
.....+++.|+|||.+. ..++.++||||||+++|||++|+.||... ...++............ ........+.++
T Consensus 183 ~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVECRPLTPQAVDL 258 (285)
T ss_dssp ----CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCC--CCCCHHHHHH
T ss_pred CcCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccccccCcCCHHHHHH
Confidence 23456899999999874 56899999999999999999999999763 22233332222221111 111124558899
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.||++|||+.|+++
T Consensus 259 i~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 259 LKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999975
No 130
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.4e-40 Score=346.37 Aligned_cols=242 Identities=19% Similarity=0.244 Sum_probs=198.9
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccc-cCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKL-AGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.+.||+|+||.||+|.... ++.||+|+++.... .....+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4689999999999999764 78999999975432 224567788999999888 89999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 105 gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 178 (353)
T 2i0e_A 105 GGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 178 (353)
T ss_dssp SCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccc
Confidence 9999999953 24689999999999999999999999 999999999999999999999999999986432 223
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++.+.+..... ..+......+.+++.
T Consensus 179 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~li~ 253 (353)
T 2i0e_A 179 KTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHNV--AYPKSMSKEAVAICK 253 (353)
T ss_dssp CCCCSCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHH
T ss_pred ccccCCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCC--CCCCCCCHHHHHHHH
Confidence 3467899999999987 567899999999999999999999999753 23333333322211 122334556899999
Q ss_pred HcccCCCCCCCC-----HHHHHH
Q 006031 624 ACNSASPEQRPT-----MWQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RPt-----~~ev~~ 641 (664)
+||+.+|++||+ +.|+.+
T Consensus 254 ~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 254 GLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHhhcCHHHcCCCCCCCHHHHhc
Confidence 999999999995 466654
No 131
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-39 Score=336.56 Aligned_cols=252 Identities=14% Similarity=0.152 Sum_probs=201.4
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEE-ecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF-QAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|++++++++|++++..++++ ...+..++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-C
Confidence 46899999999999996 6789999999865432 34688999999999998877777766 5566789999999 8
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~ 543 (664)
++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 89 ~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 89 PSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp CBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999999963 234699999999999999999999999 99999999999999 4889999999999987654322
Q ss_pred ---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-hhh-HHHHHHhhccCCC--c
Q 006031 544 ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-PNE-MMNWVRSAREDDG--A 610 (664)
Q Consensus 544 ---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-~~~-~~~~~~~~~~~~~--~ 610 (664)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||...... ..+ +............ .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccccccccCChhhhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHH
Confidence 2346899999999987 567899999999999999999999999864322 112 2222221111110 1
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
....+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 12234568999999999999999999999999999876654
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.5e-39 Score=332.92 Aligned_cols=241 Identities=24% Similarity=0.327 Sum_probs=199.5
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.... +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 91 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCC
Confidence 4689999999999999654 67899999875443 45778999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSL-Q 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~-~ 543 (664)
+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....... .
T Consensus 92 ~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 92 ELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp BHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99999853 34589999999999999999999999 99999999999999 888999999999997654432 2
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc--hhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA--EDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l 621 (664)
....+++.|+|||.+. +.++.++||||||+++|||++|+.||... ...+....+......... ....+..+.++
T Consensus 166 ~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (277)
T 3f3z_A 166 RTKVGTPYYVSPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPEKDWLNVSPQAESL 241 (277)
T ss_dssp CCCCSCTTTCCHHHHT--TCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHH
T ss_pred hccCCCCCccChHHhc--ccCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCchhhhcCCHHHHHH
Confidence 3456899999999885 35899999999999999999999999763 223333332222222111 11234668999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.+|++|||+.|+++
T Consensus 242 i~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 242 IRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999985
No 133
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.7e-40 Score=341.41 Aligned_cols=244 Identities=20% Similarity=0.261 Sum_probs=192.5
Q ss_pred ccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCCC
Q 006031 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
++||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCC
Confidence 5799999999999994 578899999997543 24567889999999884 7999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC---eEEeeccccccccCCC--
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTALTADSL-- 542 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~~~~~-- 542 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++.......
T Consensus 97 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 97 SILSHIHK-----RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred cHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99999963 24689999999999999999999999 9999999999999998776 9999999987543211
Q ss_pred -------CCCCCCCCcccCcccccc----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-------------hhHH
Q 006031 543 -------QDDDPDNLLYKAPETRNA----SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP-------------NEMM 598 (664)
Q Consensus 543 -------~~~~~~~~~y~aPE~~~~----~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~-------------~~~~ 598 (664)
.....+|+.|+|||.+.. ...++.++|||||||++|||++|+.||....... ..+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 112358999999998752 1447889999999999999999999997643211 1122
Q ss_pred HHHHhhccCCCc--hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 599 NWVRSAREDDGA--EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 599 ~~~~~~~~~~~~--~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..+......... .......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 222222111111 1123456899999999999999999999986
No 134
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.3e-41 Score=349.54 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=183.9
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcC--CCCCCcccceEEEecCC----ceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGG--LRHPNLVPLRAYFQAKE----ERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~e 462 (664)
.+.||+|+||.||+|... ++.||||++.. .....+.+|.+++.. ++||||+++++++...+ ..++|||
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecc-----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 468999999999999875 78999999854 235667778888877 79999999999998776 7899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH--------QAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
|+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 82 YHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp CCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC--CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred ccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC-CEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 9999999999953 35888899999999999999999 77 999999999999999999999999999
Q ss_pred cccccCCCC------CCCCCCCcccCccccccCC-----CCCchhhHHHHHHHHHHHHcC----------CCCCCCCCCC
Q 006031 535 TALTADSLQ------DDDPDNLLYKAPETRNASH-----QATSKSDVYSFGVLLLELLTG----------KPPSQHSFLV 593 (664)
Q Consensus 535 a~~~~~~~~------~~~~~~~~y~aPE~~~~~~-----~~~~ksDVwSfGvvl~elltG----------~~P~~~~~~~ 593 (664)
++....... ....||+.|+|||.+.... .++.++|||||||++|||+|| +.||......
T Consensus 155 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3gxj_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp -CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-
T ss_pred ceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC
Confidence 976544321 1236899999999986332 233689999999999999999 6666543221
Q ss_pred ---hhhHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 594 ---PNEMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 594 ---~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..++...+........ ...+.+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1122232222221111 12356678999999999999999999999999999987654
No 135
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=350.89 Aligned_cols=250 Identities=17% Similarity=0.191 Sum_probs=202.1
Q ss_pred hccccccCceeEEEEEEcC---------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCccc-------------
Q 006031 389 AELLGKGSLGTTYKAVLDN---------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP------------- 446 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~------------- 446 (664)
.+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i 119 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAI 119 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccCCccCc
Confidence 4689999999999999764 789999998643 35789999999999999988
Q ss_pred --ceEEEec-CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC
Q 006031 447 --LRAYFQA-KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP 523 (664)
Q Consensus 447 --l~g~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~ 523 (664)
+++++.. .+..++||||+ +++|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 120 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 120 PTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred cchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence 5677765 67889999999 99999999642 135799999999999999999999999 9999999999999999
Q ss_pred CC--CeEEeeccccccccCCCC---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 006031 524 DF--EACLADYCLTALTADSLQ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592 (664)
Q Consensus 524 ~~--~~ki~DfGla~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~ 592 (664)
++ .+||+|||+++....... ....+|+.|+|||.+. ...++.++|||||||++|||+||+.||.....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 98 899999999976543221 2236889999999987 56789999999999999999999999986543
Q ss_pred ChhhHHHHHHhhccCCC-c------hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 593 VPNEMMNWVRSAREDDG-A------EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 593 ~~~~~~~~~~~~~~~~~-~------~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
....+............ . ....+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 274 NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 33444444332222211 1 11234568999999999999999999999999999976654
No 136
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.8e-40 Score=337.00 Aligned_cols=248 Identities=25% Similarity=0.374 Sum_probs=196.5
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC-CceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK-EERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... ++.||+|.++.. ...+.+.+|++++++++||||+++++++.+. +..++||||+++|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~ 100 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCC
Confidence 468999999999999875 789999998643 2457789999999999999999999997654 4789999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP 547 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 547 (664)
+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ....
T Consensus 101 ~L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~ 175 (278)
T 1byg_A 101 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGK 175 (278)
T ss_dssp EHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccc-cCCC
Confidence 999999631 122378999999999999999999999 99999999999999999999999999987654432 2345
Q ss_pred CCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 548 DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 548 ~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
++..|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+...... ..+...+..+.+++.+||
T Consensus 176 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l 251 (278)
T 1byg_A 176 LPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKM-DAPDGCPPAVYEVMKNCW 251 (278)
T ss_dssp CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTCCC-CCCTTCCHHHHHHHHHHT
T ss_pred ccccccCHHHhC-CCCCCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCCCC-CCcccCCHHHHHHHHHHh
Confidence 678899999986 5678999999999999999999 99998754 233443333322211 222334556899999999
Q ss_pred cCCCCCCCCHHHHHHHHHhhhccc
Q 006031 627 SASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 627 ~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
+.+|++|||+.|+++.|++++...
T Consensus 252 ~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 252 HLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCChhhCCCHHHHHHHHHHHHhhh
Confidence 999999999999999999997643
No 137
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.2e-40 Score=351.42 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=197.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... ++..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 467999999999999975 688999999875421 233567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP 547 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 547 (664)
+|.++++. ...+++..+..|+.+++.||+|||+..+|+||||||+||+++.++.+||+|||++............
T Consensus 117 ~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 117 SLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 99999963 2468999999999999999999998438999999999999999999999999999765544444567
Q ss_pred CCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChh--------------------------------
Q 006031 548 DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPN-------------------------------- 595 (664)
Q Consensus 548 ~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~-------------------------------- 595 (664)
+++.|+|||.+. ...++.++|||||||++|||+||+.||........
T Consensus 192 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 192 GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 899999999987 56789999999999999999999999975321110
Q ss_pred --------hHHHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 596 --------EMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 596 --------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+..+.+................+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0011111111111111223456899999999999999999999986
No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.7e-40 Score=335.38 Aligned_cols=254 Identities=21% Similarity=0.311 Sum_probs=204.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC----CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||.||+|... +++.||+|.++...... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 468999999999999976 68899999987543321 2467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC----CeEEeecccccccc
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF----EACLADYCLTALTA 539 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~~~~ 539 (664)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++....
T Consensus 90 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 90 VSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp CCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 999999999953 34689999999999999999999999 999999999999998877 89999999998664
Q ss_pred CCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHH
Q 006031 540 DSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLG 616 (664)
Q Consensus 540 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 616 (664)
... .....+++.|+|||.+. ...++.++||||||+++|||++|+.||... ...+....+........ .....+.
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 164 AGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGE--TKQETLTNISAVNYDFDEEYFSNTSE 240 (283)
T ss_dssp --------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred CCCcccccCCCcCccCcceec-CCCCCcchhhhhHHHHHHHHHHCCCCCCCc--chHHHHHHhHhcccCCcchhcccCCH
Confidence 432 22346889999999986 567899999999999999999999999753 22232222222221111 1122345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhcccc
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLK--MLQEIKGAVL 651 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~~~~~ 651 (664)
.+.+++.+||+.+|++|||+.|+++ .+++++....
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 277 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhh
Confidence 6899999999999999999999997 5677765543
No 139
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.1e-40 Score=345.67 Aligned_cols=241 Identities=22% Similarity=0.291 Sum_probs=180.0
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.++.+++ ||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 367999999999999975 5889999998542 4567889999999997 99999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC---CeEEeeccccccccCCC-
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF---EACLADYCLTALTADSL- 542 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~---~~ki~DfGla~~~~~~~- 542 (664)
|+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999999963 35699999999999999999999999 999999999999997665 89999999998654432
Q ss_pred -CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-----hhhHHHHHHhhccCCC--chhHH
Q 006031 543 -QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-----PNEMMNWVRSAREDDG--AEDER 614 (664)
Q Consensus 543 -~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~ 614 (664)
.....+|+.|+|||.+. ...++.++|||||||++|||++|+.||...... ..++...+........ .....
T Consensus 165 ~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLN-QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS
T ss_pred cccccCCCcCccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC
Confidence 22345789999999986 667899999999999999999999999764321 1223332222221111 11223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 615 LGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 615 ~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+..+.+++.+||+.||++|||+.|+++
T Consensus 244 s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 244 SQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 566899999999999999999999864
No 140
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.3e-40 Score=337.85 Aligned_cols=250 Identities=20% Similarity=0.245 Sum_probs=187.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+++.||+|++..........+.+.++...++.++||||+++++++.+.+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 46799999999999996 578999999997553322233445566666888999999999999999999999999997 5
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DDD 546 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~-~~~ 546 (664)
+|.+++.... .....+++..+..|+.|++.||+|||+..+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 91 ~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (290)
T 3fme_A 91 SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169 (290)
T ss_dssp EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------
T ss_pred chHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccccccc
Confidence 8888775311 12457999999999999999999999865999999999999999999999999999987654432 234
Q ss_pred CCCCcccCccccc---cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 547 PDNLLYKAPETRN---ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 547 ~~~~~y~aPE~~~---~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
.+++.|+|||.+. ....++.++||||||+++|||+||+.||.........+.......... ......+..+.+++.
T Consensus 170 ~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~ 248 (290)
T 3fme_A 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ-LPADKFSAEFVDFTS 248 (290)
T ss_dssp CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-CCTTTSCHHHHHHHH
T ss_pred CCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-cccccCCHHHHHHHH
Confidence 6899999999862 356788999999999999999999999975332223333333322222 222334556899999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 006031 624 ACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~ 641 (664)
+||+.+|++|||+.|+++
T Consensus 249 ~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 249 QCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHTCSSGGGSCCHHHHTT
T ss_pred HHhhcChhhCcCHHHHHh
Confidence 999999999999999987
No 141
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7e-40 Score=336.30 Aligned_cols=250 Identities=21% Similarity=0.326 Sum_probs=200.5
Q ss_pred hccccccCceeEEEEEEcC----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|...+ +..||+|.+..... ....+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 4689999999999998643 34699999875422 1245778999999999999999999999864 4678999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~- 543 (664)
++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 95 ~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 95 PYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCCHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 99999999963 234589999999999999999999999 999999999999999999999999999986654321
Q ss_pred --CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHH
Q 006031 544 --DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620 (664)
Q Consensus 544 --~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 620 (664)
....++..|+|||.+. ...++.++||||||+++|||+| |+.||... ...+....+....... .+...+..+.+
T Consensus 170 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~llt~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 245 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESIN-FRRFTTASDVWMFAVCMWEILSFGKQPFFWL--ENKDVIGVLEKGDRLP-KPDLCPPVLYT 245 (281)
T ss_dssp ---CCCCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CGGGHHHHHHHTCCCC-CCTTCCHHHHH
T ss_pred ccccCCCCcceeCchhhc-cCCCCchhccHHHHHHHHHHHhCCCCCcccC--ChHHHHHHHhcCCCCC-CCCCCCHHHHH
Confidence 2344678899999986 5678999999999999999999 99998753 2233333333222211 22233456899
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 621 VAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
++.+||+.+|++|||+.|+++.|+++...
T Consensus 246 li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 246 LMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999988653
No 142
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=347.62 Aligned_cols=238 Identities=19% Similarity=0.238 Sum_probs=195.8
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC------CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG------TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 46899999999999985 568999999997654321 13346778999999999999999999999999999999
Q ss_pred ecCCCC-CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC
Q 006031 462 DYQPNG-SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540 (664)
Q Consensus 462 e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 540 (664)
||+.+| +|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 109 e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 109 EKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp ECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 999777 99999953 34699999999999999999999999 999999999999999999999999999987654
Q ss_pred CC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHH
Q 006031 541 SL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL 619 (664)
Q Consensus 541 ~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 619 (664)
.. .....||+.|+|||.+.+....+.++|||||||++|||++|+.||..... . .. .....+......+.
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~---~~---~~~~~~~~~~~~l~ 252 (335)
T 3dls_A 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----T---VE---AAIHPPYLVSKELM 252 (335)
T ss_dssp TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----G---TT---TCCCCSSCCCHHHH
T ss_pred CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----H---Hh---hccCCCcccCHHHH
Confidence 32 22346899999999987444458899999999999999999999965211 0 00 01111122344589
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 006031 620 EVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
+++.+||+.+|++|||+.|+++.
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999874
No 143
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.5e-40 Score=343.29 Aligned_cols=258 Identities=22% Similarity=0.310 Sum_probs=205.2
Q ss_pred hccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCC-ceEEE
Q 006031 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKE-ERLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~-~~~lV 460 (664)
.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 46899999999999984 3568999999975432 12346788999999999 7999999999987755 58999
Q ss_pred EecCCCCCHHHHhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEE
Q 006031 461 YDYQPNGSLFSLIHGSKST-----------RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACL 529 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki 529 (664)
|||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl 189 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKI 189 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEE
Confidence 9999999999999753211 022389999999999999999999999 9999999999999999999999
Q ss_pred eeccccccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhh
Q 006031 530 ADYCLTALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSA 604 (664)
Q Consensus 530 ~DfGla~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~ 604 (664)
+|||+++....... ....+++.|+|||.+. ...++.++||||||+++|||+| |+.||...... ..+...+...
T Consensus 190 ~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~~~~ 267 (316)
T 2xir_A 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG 267 (316)
T ss_dssp CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHHHHHHHT
T ss_pred CCCccccccccCccceeccCCCcceeecCchhhc-cccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHHHHHhccC
Confidence 99999986543321 1234677899999987 5678999999999999999999 99999764322 2333333222
Q ss_pred ccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 605 REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 605 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
... ..+......+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 268 ~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 268 TRM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 211 1122234568999999999999999999999999999876554
No 144
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.3e-40 Score=344.60 Aligned_cols=246 Identities=20% Similarity=0.274 Sum_probs=199.2
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCCC
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
+.||+|+||.||+|... +++.||+|++............+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999965 589999999986655445578899999999998 4699999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeeccccccccCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTALTADSL-Q 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~~-~ 543 (664)
+|.+++.. .....+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...... .
T Consensus 115 ~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 190 (327)
T 3lm5_A 115 EIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190 (327)
T ss_dssp EGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred cHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc
Confidence 99999853 2345699999999999999999999999 9999999999999998 7899999999998765432 2
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 621 (664)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||.... ..+....+....... .........+.++
T Consensus 191 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 267 (327)
T 3lm5_A 191 REIMGTPEYLAPEILN-YDPITTATDMWNIGIIAYMLLTHTSPFVGED--NQETYLNISQVNVDYSEETFSSVSQLATDF 267 (327)
T ss_dssp ---CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred ccccCCcCccCCeeec-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHHHhcccccCchhhcccCHHHHHH
Confidence 3356899999999987 6778999999999999999999999997632 222222222221111 1223345568999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
+.+||+.+|++|||++|+++.
T Consensus 268 i~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 268 IQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhhCcCHHHHhCC
Confidence 999999999999999999753
No 145
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.1e-39 Score=340.07 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=200.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcC--CCCCCcccceEEEecCC----ceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGG--LRHPNLVPLRAYFQAKE----ERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~e 462 (664)
.+.||+|+||.||+|.. +++.||||++... ....+.+|++++.. ++||||+++++++...+ ..++|||
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e 120 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEEC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEe
Confidence 47899999999999998 4889999998542 34567778887766 79999999999998776 7899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH--------QAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
|+++|+|.+++.. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 121 YHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred ecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999963 35899999999999999999999 66 999999999999999999999999999
Q ss_pred cccccCCC------CCCCCCCCcccCccccccCCC-----CCchhhHHHHHHHHHHHHcC----------CCCCCCCCCC
Q 006031 535 TALTADSL------QDDDPDNLLYKAPETRNASHQ-----ATSKSDVYSFGVLLLELLTG----------KPPSQHSFLV 593 (664)
Q Consensus 535 a~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-----~~~ksDVwSfGvvl~elltG----------~~P~~~~~~~ 593 (664)
+....... .....+++.|+|||.+..... ++.++|||||||++|||+|| +.||......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 97654432 233468999999999863322 23689999999999999999 7787654332
Q ss_pred hh---hHHHHHHhhccCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 594 PN---EMMNWVRSAREDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 594 ~~---~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.. .+...+........ ...+....+.+++.+||+.+|++|||+.||++.|+++.+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 22 22222221111111 12356678999999999999999999999999999997654
No 146
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.3e-40 Score=358.13 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=197.6
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||+||+|.... ++.||+|+++.... .....+.+.+|+.++..++||||++++++|.+.+..++||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 4689999999999999764 78999999965322 112234588999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---C
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---Q 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~ 543 (664)
|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 159 g~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 159 GDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 999999963 235699999999999999999999999 99999999999999999999999999997654332 2
Q ss_pred CCCCCCCcccCccccc----cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHh-h--ccCCCchhHHHH
Q 006031 544 DDDPDNLLYKAPETRN----ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRS-A--REDDGAEDERLG 616 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~----~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 616 (664)
....||+.|+|||++. +...++.++|||||||++|||++|+.||... ...+....+.. . ............
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~~s~ 311 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERFQFPTQVTDVSE 311 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCCCSSCCCSCH
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccccCCcccccCCH
Confidence 2357999999999885 2456899999999999999999999999763 22222222211 1 111111122345
Q ss_pred HHHHHHHHcccCCCCC--CCCHHHHHH
Q 006031 617 MLLEVAIACNSASPEQ--RPTMWQVLK 641 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~--RPt~~ev~~ 641 (664)
.+.+++.+|+..+|++ ||++.|+++
T Consensus 312 ~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 312 NAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HHHHHHHHHhcccccccCCCCHHHHhC
Confidence 5889999999888888 999999876
No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.4e-40 Score=347.34 Aligned_cols=251 Identities=19% Similarity=0.224 Sum_probs=195.6
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCccc---cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL---AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
..+.||+|+||+||+|.. .++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999996 4678999999865432 234567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006031 464 QPNGSLFSLIHGSKST-----------------------------------RAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 508 (664)
+++|+|.+++...... ....+++..+..|+.|++.||+|||+. +
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-G 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-C
Confidence 9999999999521000 012245677888999999999999999 9
Q ss_pred cccCCCCCCCeEeCCCC--CeEEeeccccccccCCC------CCCCCCCCcccCcccccc-CCCCCchhhHHHHHHHHHH
Q 006031 509 LVHGNLKSSNVLLGPDF--EACLADYCLTALTADSL------QDDDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLE 579 (664)
Q Consensus 509 ivHrDlk~~NILl~~~~--~~ki~DfGla~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~ksDVwSfGvvl~e 579 (664)
|+||||||+||+++.++ .+||+|||+++...... .....+|+.|+|||.+.. ...++.++|||||||++||
T Consensus 189 ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~e 268 (345)
T 3hko_A 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268 (345)
T ss_dssp EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHH
T ss_pred ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHH
Confidence 99999999999998776 89999999998653321 123468999999998863 2678899999999999999
Q ss_pred HHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 580 LLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 580 lltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
|++|+.||.... ..+....+....... .........+.+++.+||+.+|++|||+.|+++
T Consensus 269 l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 269 LLMGAVPFPGVN--DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHSSCSSCCSS--HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHCCCCCCCCC--hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 999999997542 222222222111111 122234566899999999999999999999987
No 148
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8e-40 Score=340.93 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=196.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 468999999999999965 68899999997543322 2246789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 119 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 192 (309)
T 2h34_A 119 VDLAAMLRR-----QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL 192 (309)
T ss_dssp EEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence 999999963 24689999999999999999999999 999999999999999999999999999876544321
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-CchhHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD-GAEDERLGMLLEVA 622 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~ 622 (664)
....+++.|+|||.+. ...++.++||||||+++|||+||+.||.... ...+...+....... ......+..+.+++
T Consensus 193 ~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 269 (309)
T 2h34_A 193 GNTVGTLYYMAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQ--LSVMGAHINQAIPRPSTVRPGIPVAFDAVI 269 (309)
T ss_dssp ----CCGGGCCGGGTC-C----CCCHHHHHHHHHHHHHHSSCSSCSCH--HHHHHHHHHSCCCCGGGTSTTCCTHHHHHH
T ss_pred cccCCCcCccCHHHHc-CCCCCchHhHHHHHHHHHHHHHCCCCCCCch--HHHHHHHhccCCCCccccCCCCCHHHHHHH
Confidence 2345889999999987 5678899999999999999999999997531 112222222111111 11223345688999
Q ss_pred HHcccCCCCCCC-CHHHHHHHHHhhhccc
Q 006031 623 IACNSASPEQRP-TMWQVLKMLQEIKGAV 650 (664)
Q Consensus 623 ~~Cl~~~P~~RP-t~~ev~~~L~~i~~~~ 650 (664)
.+||+.+|++|| ++.++++.|+++....
T Consensus 270 ~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 270 ARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999876554
No 149
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.5e-39 Score=333.13 Aligned_cols=252 Identities=14% Similarity=0.153 Sum_probs=200.1
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEE-ecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF-QAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+++++.++|++++..++++ ...+..++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-C
Confidence 46899999999999995 6789999998754332 23478899999999998888777766 5566789999999 9
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~ 543 (664)
++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 89 ~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 89 PSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp CBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999999963 234699999999999999999999999 99999999999999 7889999999999987654321
Q ss_pred ---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--hhHHHHHHhhccCCC--c
Q 006031 544 ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--NEMMNWVRSAREDDG--A 610 (664)
Q Consensus 544 ---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~--~ 610 (664)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||....... ..+............ .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred CccCCCCcccccCCCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh
Confidence 2346899999999987 5678999999999999999999999997643221 122222221111110 0
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
....+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 11224568999999999999999999999999999977654
No 150
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.7e-40 Score=339.65 Aligned_cols=242 Identities=19% Similarity=0.295 Sum_probs=197.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG 91 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence 468999999999999965 688999999975432 23467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQD 544 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~~ 544 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++.........
T Consensus 92 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 92 ELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp BHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999853 24689999999999999999999999 99999999999999 78899999999999765543332
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEVA 622 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~ 622 (664)
...+++.|+|||.+. ...++.++||||||+++|||++|+.||... ....+...+....... ......+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 242 (304)
T 2jam_A 166 TACGTPGYVAPEVLA-QKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFESPFWDDISESAKDFI 242 (304)
T ss_dssp HHHSCCCBCCTTTBS-SCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCccccccCCHHHHHHH
Confidence 345789999999987 667899999999999999999999998753 2233333333222111 12233456689999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+||+.||++|||+.|+++
T Consensus 243 ~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 243 CHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHCSSTTTSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999986
No 151
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1e-39 Score=341.82 Aligned_cols=255 Identities=21% Similarity=0.359 Sum_probs=205.5
Q ss_pred hccccccCceeEEEEEEc------CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||.||+|... .++.||+|.+..... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 578999999999999864 378899999975432 1234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 463 YQPNGSLFSLIHGSK-----STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
|+++|+|.++++... ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCccccc
Confidence 999999999996321 11224679999999999999999999999 999999999999999999999999999976
Q ss_pred ccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 538 TADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 538 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
...... ....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+...... ..+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~ 263 (322)
T 1p4o_A 188 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLL-DKPD 263 (322)
T ss_dssp GGGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTTCCC-CCCT
T ss_pred cccccccccccCCCCCCCccChhhhc-cCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcCCcC-CCCC
Confidence 543221 1234578899999986 5678999999999999999999 89998753 233444333322211 1223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
..+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 3445689999999999999999999999999887543
No 152
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.6e-40 Score=348.90 Aligned_cols=247 Identities=15% Similarity=0.140 Sum_probs=198.2
Q ss_pred hccccccCceeEEEEE------EcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC---CCCcccceEEEecCCceEE
Q 006031 389 AELLGKGSLGTTYKAV------LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR---HPNLVPLRAYFQAKEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~l 459 (664)
.+.||+|+||+||+|. ...++.||+|+++.. ....+.+|++++.+++ |+||+++++++...+..++
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l 144 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL 144 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence 4689999999999994 556889999998643 3566778888887776 9999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-----------CCCeE
Q 006031 460 IYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP-----------DFEAC 528 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~-----------~~~~k 528 (664)
||||+++|+|.++++.........++|..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999999643323456799999999999999999999998 9999999999999998 89999
Q ss_pred EeeccccccccC----CCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhh
Q 006031 529 LADYCLTALTAD----SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA 604 (664)
Q Consensus 529 i~DfGla~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 604 (664)
|+|||+++.... .......||+.|+|||++. +..++.++|||||||++|||+||+.||.........
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------- 294 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS-NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-------- 294 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--------
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhc-CCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--------
Confidence 999999975432 1223456899999999987 566899999999999999999999998643221111
Q ss_pred ccCCCchhHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhhhccc
Q 006031 605 REDDGAEDERLGMLLEVAIACNSASPEQR-PTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 605 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Pt~~ev~~~L~~i~~~~ 650 (664)
.............+.+++..|++.+|.+| |++.++.+.|+++....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 295 PEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred echhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00000000123457789999999999999 58899999998876553
No 153
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.3e-39 Score=343.56 Aligned_cols=245 Identities=20% Similarity=0.253 Sum_probs=195.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec--------CCceEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA--------KEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------~~~~~l 459 (664)
.+.||+|+||+||+|.. .+++.||+|++............+.+|++++++++||||+++++++.. .+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46899999999999997 578999999997665544456678899999999999999999999876 346899
Q ss_pred EEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecccccccc
Q 006031 460 IYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTA 539 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 539 (664)
||||+++ +|.+.+.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 v~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp EEECCSE-EHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCC-CHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 9999975 78887753 335699999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC------CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC----
Q 006031 540 DSL------QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG---- 609 (664)
Q Consensus 540 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---- 609 (664)
... .....+|+.|+|||.+.+...++.++|||||||++|||+||+.||.... ..+....+........
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhhc
Confidence 221 1234578999999988755668999999999999999999999997632 2222222221111000
Q ss_pred --------------------chhH------HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 --------------------AEDE------RLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 --------------------~~~~------~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
...+ ....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 1245789999999999999999999986
No 154
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.9e-39 Score=340.79 Aligned_cols=256 Identities=24% Similarity=0.396 Sum_probs=202.5
Q ss_pred hccccccCceeEEEEEE-cCCeE--EEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLI--VCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|.. .++.. ||+|.+..... ....+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 57899999999999985 45654 48998864322 23456789999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhccCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecc
Q 006031 465 PNGSLFSLIHGSK-----------STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC 533 (664)
Q Consensus 465 ~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfG 533 (664)
++|+|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTT
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeEEEcccC
Confidence 9999999997432 01234799999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCC-CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCch
Q 006031 534 LTALTADSLQ-DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAE 611 (664)
Q Consensus 534 la~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (664)
+++....... ....++..|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+...... ..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~-~~~ 263 (327)
T 1fvr_A 188 LSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQGYRL-EKP 263 (327)
T ss_dssp CEESSCEECCC----CCTTTCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHGGGTCCC-CCC
T ss_pred cCccccccccccCCCCCccccChhhhc-cccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHHHhhcCCCC-CCC
Confidence 9975433221 2234678899999986 5667899999999999999998 99999753 223333333322111 122
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 612 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
...+..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 264 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 264 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 233456899999999999999999999999999986654
No 155
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-39 Score=363.52 Aligned_cols=246 Identities=19% Similarity=0.255 Sum_probs=203.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||.||+|... +|+.||+|++..... .......+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 368999999999999975 689999999965432 224567788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 269 g~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~ 344 (576)
T 2acx_A 269 GDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344 (576)
T ss_dssp CBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEEC
T ss_pred CcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCccccc
Confidence 9999999642 234589999999999999999999999 99999999999999999999999999998765432 234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC--hhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV--PNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
..||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+...+..... ..+......+.+++.
T Consensus 345 ~~GT~~Y~APEvl~-~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~--~~p~~~s~~~~dLI~ 421 (576)
T 2acx_A 345 RVGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE--EYSERFSPQARSLCS 421 (576)
T ss_dssp CCSCGGGCCHHHHT-TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHH
T ss_pred cCCCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc--cCCccCCHHHHHHHH
Confidence 57999999999987 567899999999999999999999999764321 2234443333222 122334556899999
Q ss_pred HcccCCCCCCC-----CHHHHHH
Q 006031 624 ACNSASPEQRP-----TMWQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RP-----t~~ev~~ 641 (664)
+||+.||++|| ++.||++
T Consensus 422 ~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 422 QLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HhccCCHHHcCCCCCCCHHHHHh
Confidence 99999999999 7888875
No 156
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.1e-40 Score=360.26 Aligned_cols=242 Identities=18% Similarity=0.240 Sum_probs=191.1
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||||++..... .......+.+|++++++++||||++++++|.+.+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 47899999999999995 4688999999975432 123345678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ-AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQ 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~ 543 (664)
|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 233 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 233 GELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 999999953 3468999999999999999999998 6 9999999999999999999999999999864332 22
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||++. ...++.++|||||||++|||++|+.||... ....+...+..... ..+......+.+++.
T Consensus 307 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~~~~~~~li~ 381 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEI--RFPRTLGPEAKSLLS 381 (446)
T ss_dssp CCSSSCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHH
T ss_pred ccccCCccccCHhhcC-CCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCC--CCCccCCHHHHHHHH
Confidence 3457899999999986 677899999999999999999999999753 22333333322211 122234456899999
Q ss_pred HcccCCCCCCC-----CHHHHHH
Q 006031 624 ACNSASPEQRP-----TMWQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RP-----t~~ev~~ 641 (664)
+||+.||++|| +++|+++
T Consensus 382 ~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 382 GLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHcccCHHHhCCCCCCCHHHHHh
Confidence 99999999999 9999975
No 157
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9.3e-40 Score=335.69 Aligned_cols=243 Identities=17% Similarity=0.246 Sum_probs=196.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||+||+|... +++.||+|++............+.+|+..+.++ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 468999999999999975 789999999976544444567788999999888 999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-------------------CCCe
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP-------------------DFEA 527 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~-------------------~~~~ 527 (664)
|+|.+++.... .....+++..+..|+.|++.||+|||+. +|+||||||+||+++. ...+
T Consensus 96 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
T 1x8b_A 96 GSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173 (289)
T ss_dssp CBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------CCCE
T ss_pred CcHHHHHHhhc-ccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence 99999996421 1124689999999999999999999999 9999999999999984 4479
Q ss_pred EEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC
Q 006031 528 CLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED 607 (664)
Q Consensus 528 ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 607 (664)
||+|||.+....... ...++..|+|||.+.....++.++|||||||++|||++|++|+... ............
T Consensus 174 kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~~~- 246 (289)
T 1x8b_A 174 KIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQWHEIRQGRLP- 246 (289)
T ss_dssp EECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHHHHHHTTCCC-
T ss_pred EEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHHHHHHcCCCC-
Confidence 999999998765432 3468999999999875446778999999999999999999876432 222222221111
Q ss_pred CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 608 DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 608 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 247 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 247 -RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 122233456899999999999999999999975
No 158
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.9e-40 Score=349.92 Aligned_cols=244 Identities=21% Similarity=0.271 Sum_probs=189.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHH-HcCCCCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMES-VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.+.||+|+||.||+|+.+ +++.||+|+++...... ...+.+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 57889999997654322 233456666666 577899999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 123 gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~ 196 (373)
T 2r5t_A 123 GGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT 196 (373)
T ss_dssp SCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCC
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCCCcc
Confidence 9999999953 34688999999999999999999999 999999999999999999999999999986432 223
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ...++.+.+.... ...+......+.+++.
T Consensus 197 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~--~~~~~~~~~~~~~li~ 271 (373)
T 2r5t_A 197 STFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNKP--LQLKPNITNSARHLLE 271 (373)
T ss_dssp CSBSCCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--BHHHHHHHHHHSC--CCCCSSSCHHHHHHHH
T ss_pred ccccCCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcc--cCCCCCCCHHHHHHHH
Confidence 3457899999999987 667899999999999999999999999753 2223333222211 1122233456889999
Q ss_pred HcccCCCCCCCCHHHHHHHH
Q 006031 624 ACNSASPEQRPTMWQVLKML 643 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~L 643 (664)
+||+.||++||++.+.++++
T Consensus 272 ~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 272 GLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp HHTCSSGGGSTTTTTTHHHH
T ss_pred HHcccCHHhCCCCCCCHHHH
Confidence 99999999999986444443
No 159
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.5e-40 Score=344.75 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=188.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|.. .+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 46899999999999985 478999999997655444445678899999999999999999999999999999999998 5
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe-----CCCCCeEEeeccccccccCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-----GPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl-----~~~~~~ki~DfGla~~~~~~~ 542 (664)
+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 118 ~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~ 191 (329)
T 3gbz_A 118 DLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191 (329)
T ss_dssp EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---
T ss_pred CHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc
Confidence 99999963 34589999999999999999999999 99999999999999 455569999999998654332
Q ss_pred --CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC-----------
Q 006031 543 --QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG----------- 609 (664)
Q Consensus 543 --~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----------- 609 (664)
.....+|..|+|||.+.+...++.++|||||||++|||++|+.||..... ...+............
T Consensus 192 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (329)
T 3gbz_A 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFEVLGLPDDTTWPGVTALPD 270 (329)
T ss_dssp --------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-HHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence 22345799999999987556689999999999999999999999975321 1222222221111100
Q ss_pred ----------------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 ----------------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 ----------------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
........+.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00112356889999999999999999999975
No 160
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=350.41 Aligned_cols=257 Identities=19% Similarity=0.228 Sum_probs=206.1
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC--ceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE--ERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lV~e~~~ 465 (664)
.++||+|+||+||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 468999999999999975 488999999975443 234677889999999999999999999998755 6799999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe----CCCCCeEEeeccccccccCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADS 541 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla~~~~~~ 541 (664)
+|+|.+++.... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999996421 223499999999999999999999999 99999999999999 78888999999999876543
Q ss_pred C-CCCCCCCCcccCccccccC-------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--hhHH-HHHHhhccC---
Q 006031 542 L-QDDDPDNLLYKAPETRNAS-------HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--NEMM-NWVRSARED--- 607 (664)
Q Consensus 542 ~-~~~~~~~~~y~aPE~~~~~-------~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--~~~~-~~~~~~~~~--- 607 (664)
. .....||..|+|||.+... ..++.++|||||||++|||+||+.||....... .++. .........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 3 2345689999999987521 456789999999999999999999996533211 1222 222211110
Q ss_pred -------------------CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 608 -------------------DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 608 -------------------~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
..........+.+++.+||+.||++||++.|+++.++++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 012355677789999999999999999999999999988654
No 161
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-39 Score=334.26 Aligned_cols=242 Identities=24% Similarity=0.357 Sum_probs=201.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... ++..||+|.+..... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 468999999999999965 578999999865432 123457899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 99 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (284)
T 2vgo_A 99 GELYKELQK-----HGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM 172 (284)
T ss_dssp EEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence 999999963 24689999999999999999999999 999999999999999999999999999977665544556
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcc
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACN 626 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 626 (664)
.++..|+|||.+. ...++.++||||||+++|||++|+.||.... ..+....+.... ...+......+.+++.+||
T Consensus 173 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l 247 (284)
T 2vgo_A 173 CGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--HTETHRRIVNVD--LKFPPFLSDGSKDLISKLL 247 (284)
T ss_dssp CSCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTTC--CCCCTTSCHHHHHHHHHHS
T ss_pred cCCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCCC--HhHHHHHHhccc--cCCCCcCCHHHHHHHHHHh
Confidence 7899999999987 5678999999999999999999999997532 222222222111 1122233456889999999
Q ss_pred cCCCCCCCCHHHHHH
Q 006031 627 SASPEQRPTMWQVLK 641 (664)
Q Consensus 627 ~~~P~~RPt~~ev~~ 641 (664)
+.+|++|||+.|+++
T Consensus 248 ~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 248 RYHPPQRLPLKGVME 262 (284)
T ss_dssp CSSGGGSCCHHHHHT
T ss_pred hcCHhhCCCHHHHhh
Confidence 999999999999986
No 162
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-39 Score=351.35 Aligned_cols=241 Identities=19% Similarity=0.266 Sum_probs=187.6
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHH-cCCCCCCcccceEEEec----CCceEEEEec
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESV-GGLRHPNLVPLRAYFQA----KEERLLIYDY 463 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~----~~~~~lV~e~ 463 (664)
++||+|+||+||+|... +++.||||+++. ...+.+|++++ +..+||||+++++++.. .+..++||||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~ 140 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 140 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence 57999999999999965 588999999853 23567788776 45589999999999865 5678999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeeccccccccC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTALTAD 540 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~ 540 (664)
+++|+|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 141 ~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 141 LDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 9999999999742 234699999999999999999999998 9999999999999997 78999999999986543
Q ss_pred CC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--hhHHHHHHhhccCC--CchhHHH
Q 006031 541 SL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--NEMMNWVRSAREDD--GAEDERL 615 (664)
Q Consensus 541 ~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~ 615 (664)
.. .....+|+.|+|||++. ...++.++|||||||++|||++|+.||....... ......+....... .......
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 295 (400)
T 1nxk_A 217 HNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295 (400)
T ss_dssp ----------CTTCCGGGSC-CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred CCccccCCCCCCccCHhhcC-CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence 32 23456899999999986 6778999999999999999999999997643221 12223222221111 1122345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 616 GMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
..+.+++.+||+.||++|||+.|+++.
T Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 296 EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 568999999999999999999999874
No 163
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-39 Score=333.89 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=199.0
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec--------------
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA-------------- 453 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-------------- 453 (664)
.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 468999999999999975 78999999986432 356789999999999999999998854
Q ss_pred --CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEee
Q 006031 454 --KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLAD 531 (664)
Q Consensus 454 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~D 531 (664)
....++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECc
Confidence 34579999999999999999642 235689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc
Q 006031 532 YCLTALTADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610 (664)
Q Consensus 532 fGla~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 610 (664)
||++....... .....+++.|+|||.+. ...++.++||||||+++|||++|..|+.. .............
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~~~~~~~~~~~~---- 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQIS-SQDYGKEVDLYALGLILAELLHVCDTAFE----TSKFFTDLRDGII---- 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHH-CSCCCTHHHHHHHHHHHHHHHSCCSSHHH----HHHHHHHHHTTCC----
T ss_pred chhheeccccccccccCCcccccChhhhc-cCCCcchhhhHHHHHHHHHHHhcCCcchh----HHHHHHHhhcccc----
Confidence 99998765432 23456899999999987 56789999999999999999999988642 1122221211111
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcccc
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~ 651 (664)
....+..+.+++.+||+.+|++|||+.|+++.|+.++....
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 12233458899999999999999999999999999986654
No 164
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.4e-40 Score=343.12 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=201.0
Q ss_pred hccccccCceeEEEEEE-----cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEe--cCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQ--AKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~--~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.+ .++..||||++..... ...+.+.+|++++++++||||+++++++. +.+..++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 105 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEE
Confidence 46899999999999984 4688999999975432 34567899999999999999999999987 455689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++++|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 106 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 106 EYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp ECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred eecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999632 24589999999999999999999999 9999999999999999999999999999876433
Q ss_pred C-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-------------hhhHHHHHHh
Q 006031 542 L-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV-------------PNEMMNWVRS 603 (664)
Q Consensus 542 ~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~-------------~~~~~~~~~~ 603 (664)
. .....++..|+|||.+. ...++.++||||||+++|||++|+.||...... ...+...+..
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CccceeeccCCccccccCHHHhc-cCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 2 12345778899999986 566789999999999999999999998542110 0011111111
Q ss_pred hccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 604 AREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 604 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
... ...+...+..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 260 ~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 260 GQR-LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 111 1123334566899999999999999999999999999986554
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-39 Score=342.69 Aligned_cols=246 Identities=21% Similarity=0.319 Sum_probs=194.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 468999999999999975 4889999998655443334567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~~~ 545 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 110 ~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 183 (331)
T 4aaa_A 110 ILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD 183 (331)
T ss_dssp HHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred hHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCC
Confidence 99988742 34699999999999999999999999 9999999999999999999999999999765432 2234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC------------------
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED------------------ 607 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~------------------ 607 (664)
..++..|+|||.+.+...++.++|||||||++|||++|+.||..... ...+..........
T Consensus 184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD-IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 56899999999987555789999999999999999999999976421 11222211110000
Q ss_pred --C----Cc----hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 608 --D----GA----EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 608 --~----~~----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
. .. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00 0123456899999999999999999999875
No 166
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.9e-40 Score=356.79 Aligned_cols=245 Identities=18% Similarity=0.217 Sum_probs=197.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||+||+|... +++.||+|+++.... .....+.+.+|+.+++.++|||||+++++|.+.+..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999975 588999999865322 122345588999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---C
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---Q 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~ 543 (664)
|+|.++++. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 154 g~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 226 (410)
T 3v8s_A 154 GDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226 (410)
T ss_dssp EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEEC
T ss_pred CcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccc
Confidence 999999963 2488999999999999999999999 99999999999999999999999999998765432 2
Q ss_pred CCCCCCCcccCccccccCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhc--cCCCchhHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASH---QATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAR--EDDGAEDERLGML 618 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~---~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 618 (664)
....||+.|+|||++.... .++.++|||||||++|||+||+.||... ...+....+.... ............+
T Consensus 227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 304 (410)
T 3v8s_A 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLTFPDDNDISKEA 304 (410)
T ss_dssp CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCCCTTCCCCHHH
T ss_pred cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhccccccCCCcccccHHH
Confidence 3467999999999986322 1678999999999999999999999753 2222222221111 1111111234558
Q ss_pred HHHHHHcccCCCCC--CCCHHHHHHH
Q 006031 619 LEVAIACNSASPEQ--RPTMWQVLKM 642 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~--RPt~~ev~~~ 642 (664)
.+++.+|++.+|++ ||++.||.+.
T Consensus 305 ~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 305 KNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHHHHHccChhhhCCCCCHHHHhcC
Confidence 89999999999988 9999999863
No 167
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.4e-40 Score=351.97 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=187.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEecCC--ceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKE--ERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~--~~~lV~e~~ 464 (664)
.+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++.+++ ||||+++++++...+ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 46899999999999985 56889999998654332334567789999999997 999999999997544 689999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC---
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--- 541 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 541 (664)
+ |+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 165 (388)
T 3oz6_A 94 E-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165 (388)
T ss_dssp S-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred C-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence 7 599999963 3689999999999999999999999 9999999999999999999999999999765321
Q ss_pred --------------------CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH
Q 006031 542 --------------------LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV 601 (664)
Q Consensus 542 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~ 601 (664)
......||+.|+|||.+.+...++.++|||||||++|||++|++||.+... ...+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~ 244 (388)
T 3oz6_A 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-MNQLERII 244 (388)
T ss_dssp CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHH
T ss_pred cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence 112346899999999987557789999999999999999999999976421 11121111
Q ss_pred HhhccCC-------------------------------Cc-------------hhHHHHHHHHHHHHcccCCCCCCCCHH
Q 006031 602 RSAREDD-------------------------------GA-------------EDERLGMLLEVAIACNSASPEQRPTMW 637 (664)
Q Consensus 602 ~~~~~~~-------------------------------~~-------------~~~~~~~l~~l~~~Cl~~~P~~RPt~~ 637 (664)
.....+. .. .......+.+++.+||+.||++|||+.
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 1111000 00 001234688999999999999999999
Q ss_pred HHHHH--HHhhh
Q 006031 638 QVLKM--LQEIK 647 (664)
Q Consensus 638 ev~~~--L~~i~ 647 (664)
|+++. ++.+.
T Consensus 325 e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 325 DALKHPFVSIFH 336 (388)
T ss_dssp HHTTSTTTTTTC
T ss_pred HHhCCHHHHHhc
Confidence 99875 44443
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=333.66 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=180.1
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||+|.+..... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 46799999999999996 5788999999864432 123457789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QD 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~ 544 (664)
++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 96 ~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 170 (278)
T 3cok_A 96 GEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170 (278)
T ss_dssp EEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred CcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence 999999963 235689999999999999999999999 99999999999999999999999999998654322 22
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...+++.|+|||.+. ...++.++||||||+++|||++|+.||...... +....+ .......+......+.+++.+
T Consensus 171 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~li~~ 245 (278)
T 3cok_A 171 TLCGTPNYISPEIAT-RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNKV--VLADYEMPSFLSIEAKDLIHQ 245 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------C--CSSCCCCCTTSCHHHHHHHHH
T ss_pred eccCCCCcCCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHHH--hhcccCCccccCHHHHHHHHH
Confidence 346889999999986 567789999999999999999999999754221 111111 011111222334568899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~ 641 (664)
||+.||++|||+.|+++
T Consensus 246 ~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 246 LLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HSCSSGGGSCCHHHHTT
T ss_pred HcccCHhhCCCHHHHhc
Confidence 99999999999999986
No 169
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.6e-39 Score=341.78 Aligned_cols=241 Identities=21% Similarity=0.272 Sum_probs=193.9
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-----CCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-----HPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||+||+|.. .+++.||||+++... ...+.+..|++++++++ ||||+++++++...+..++|||
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e 116 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE 116 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEEC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEc
Confidence 46899999999999996 568899999996432 23466778888888886 9999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-------------------
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP------------------- 523 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~------------------- 523 (664)
|+ +++|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 117 ~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 117 PL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp CC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred CC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99 89999999642 234589999999999999999999999 9999999999999986
Q ss_pred ------CCCeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhH
Q 006031 524 ------DFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEM 597 (664)
Q Consensus 524 ------~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~ 597 (664)
++.+||+|||+++...... ....+|+.|+|||.+. ...++.++|||||||++|||+||+.||.... ..+.
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~ 267 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYH-GSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHE--HMEH 267 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCC-CSCCSCGGGCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHH
T ss_pred cccccCCCCEEEEeccCceecCCCC-cCccCcccccCcHHHc-CCCCCCccchHHHHHHHHHHHHCCCCCCCCc--HHHH
Confidence 7899999999998654432 3456899999999987 6678999999999999999999999997532 2222
Q ss_pred HHHHHhhccCCC-----------------------------c---------------hhHHHHHHHHHHHHcccCCCCCC
Q 006031 598 MNWVRSAREDDG-----------------------------A---------------EDERLGMLLEVAIACNSASPEQR 633 (664)
Q Consensus 598 ~~~~~~~~~~~~-----------------------------~---------------~~~~~~~l~~l~~~Cl~~~P~~R 633 (664)
...+........ . .......+.+++.+||+.||++|
T Consensus 268 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 347 (360)
T 3llt_A 268 LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLR 347 (360)
T ss_dssp HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhC
Confidence 222211111110 0 00001457799999999999999
Q ss_pred CCHHHHHH
Q 006031 634 PTMWQVLK 641 (664)
Q Consensus 634 Pt~~ev~~ 641 (664)
||++|+++
T Consensus 348 pta~elL~ 355 (360)
T 3llt_A 348 PSPAELLK 355 (360)
T ss_dssp CCHHHHTT
T ss_pred CCHHHHhc
Confidence 99999874
No 170
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=344.57 Aligned_cols=254 Identities=24% Similarity=0.358 Sum_probs=191.6
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHH--HHHHHHcCCCCCCcccceEEEec-----CCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE--QHMESVGGLRHPNLVPLRAYFQA-----KEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~--~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lV~ 461 (664)
.+.||+|+||.||+|.. +++.||||++.... ...+. .|+..+..++||||+++++++.. ....++||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 46899999999999976 67899999986432 33344 44444556899999999986532 23568999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCCCCeEeCCCCCeEEeecc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW--------RLVHGNLKSSNVLLGPDFEACLADYC 533 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------~ivHrDlk~~NILl~~~~~~ki~DfG 533 (664)
||+++|+|.+++.. ...++..+..|+.|++.||+|||+.. +|+||||||+|||++.++.+||+|||
T Consensus 92 e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 92 EYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp CCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred ecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 99999999999953 23589999999999999999999752 89999999999999999999999999
Q ss_pred ccccccCCC----------CCCCCCCCcccCccccccC------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh---
Q 006031 534 LTALTADSL----------QDDDPDNLLYKAPETRNAS------HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP--- 594 (664)
Q Consensus 534 la~~~~~~~----------~~~~~~~~~y~aPE~~~~~------~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~--- 594 (664)
+++...... .....||+.|+|||.+.+. ..++.++|||||||++|||+||+.|+.......
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998654321 1134589999999988632 345678999999999999999977754322111
Q ss_pred -------------hhHHHHHHhhccCCC------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccccCCC
Q 006031 595 -------------NEMMNWVRSAREDDG------AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654 (664)
Q Consensus 595 -------------~~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~~~~~ 654 (664)
.+....+........ .....+..+.+++.+||+.||++|||+.|+++.|+++........
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence 011111111111111 123356679999999999999999999999999999987765443
No 171
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.5e-39 Score=358.75 Aligned_cols=244 Identities=24% Similarity=0.322 Sum_probs=202.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +++.||||++............+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 478999999999999965 6889999999765544456788999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC---CCCCeEEeeccccccccCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSL-Q 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~---~~~~~ki~DfGla~~~~~~~-~ 543 (664)
+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++...... .
T Consensus 107 ~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 180 (486)
T 3mwu_A 107 ELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180 (486)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence 99999853 34689999999999999999999999 999999999999995 56679999999998664432 2
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 621 (664)
....||+.|+|||++. +.++.++||||+||++|||++|+.||... ...++...+....... ......+..+.++
T Consensus 181 ~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 181 KDRIGTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp -CCTTGGGGCCGGGGG--SCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred CCCcCCCCCCCHHHhC--CCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 3456899999999986 35899999999999999999999999753 2334444333332221 1223345668999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
+.+||+.+|++|||+.|+++.
T Consensus 257 i~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999874
No 172
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-39 Score=359.79 Aligned_cols=244 Identities=23% Similarity=0.329 Sum_probs=197.5
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... ++..||+|++............+.+|+++++.++||||++++++|.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 578999999999999965 6889999999766554455678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC---CCeEEeeccccccccCCC-C
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD---FEACLADYCLTALTADSL-Q 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla~~~~~~~-~ 543 (664)
+|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++...... .
T Consensus 122 ~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~ 195 (494)
T 3lij_A 122 ELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195 (494)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence 99998853 34689999999999999999999999 99999999999999764 559999999998765432 2
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l 621 (664)
....||+.|+|||++. ..++.++|||||||++|||++|+.||... ...++...+........ .....+..+.++
T Consensus 196 ~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 196 KERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQEILRKVEKGKYTFDSPEWKNVSEGAKDL 271 (494)
T ss_dssp CCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCSGGGTTSCHHHHHH
T ss_pred cccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCchhcccCCHHHHHH
Confidence 3457899999999875 56899999999999999999999999763 23344444433322221 122345668999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
+.+||+.+|++|||+.|+++.
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999853
No 173
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=342.99 Aligned_cols=253 Identities=22% Similarity=0.377 Sum_probs=202.3
Q ss_pred hccccccCceeEEEEEE-----cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC--ceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE--ERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 461 (664)
.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 46899999999999984 368899999987542 234568999999999999999999999987654 789999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 124 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred ECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999642 34689999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----------Chh----hHHHHHH
Q 006031 542 L-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL----------VPN----EMMNWVR 602 (664)
Q Consensus 542 ~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~----------~~~----~~~~~~~ 602 (664)
. .....++..|+|||.+. ...++.++||||||+++|||+||+.|+..... ... .+...+.
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred ccccccccCCCCceeEECchhhc-CCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 2 12344677899999986 56678999999999999999999998764210 000 1111111
Q ss_pred hhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 603 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.... ...+...+..+.+++.+||+.+|++|||+.|+++.|+++++..
T Consensus 278 ~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 278 NNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp TTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 1122334566899999999999999999999999999998653
No 174
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-39 Score=351.79 Aligned_cols=245 Identities=21% Similarity=0.300 Sum_probs=188.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC------CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG------TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||+||+|... +++.||||++....... .....+.+|++++++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 467999999999999864 57899999987543221 12235889999999999999999999985 45689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC---CCeEEeeccccccc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD---FEACLADYCLTALT 538 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla~~~ 538 (664)
||+++|+|.+++. ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 219 e~~~~g~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~ 292 (419)
T 3i6u_A 219 ELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292 (419)
T ss_dssp ECCTTCBGGGGTS-----SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred EcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccceec
Confidence 9999999999984 345699999999999999999999999 99999999999999754 45999999999876
Q ss_pred cCCC-CCCCCCCCcccCcccccc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhH
Q 006031 539 ADSL-QDDDPDNLLYKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDE 613 (664)
Q Consensus 539 ~~~~-~~~~~~~~~y~aPE~~~~--~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 613 (664)
.... .....||+.|+|||++.. ...++.++|||||||++|||+||+.||..... ...+...+........ ....
T Consensus 293 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 371 (419)
T 3i6u_A 293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAE 371 (419)
T ss_dssp C-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-SCCHHHHHHTTCCCCCHHHHTT
T ss_pred CCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-hHHHHHHHhcCCCCCCchhhcc
Confidence 5432 234568999999998752 35678899999999999999999999976432 2233333332222211 1122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 614 RLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 614 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
....+.+++.+||+.+|++|||+.|+++
T Consensus 372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 372 VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 3456899999999999999999999986
No 175
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-40 Score=347.23 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=205.2
Q ss_pred hccccccCceeEEEEEEcC------CeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.... ...||+|.+..... ....+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 4789999999999999643 24799999865432 12356789999999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeec
Q 006031 462 DYQPNGSLFSLIHGSKS---------TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~Df 532 (664)
||+++|+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Df 208 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF 208 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGEEEBCCC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCeEEECcc
Confidence 99999999999963210 0134689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccC
Q 006031 533 CLTALTADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607 (664)
Q Consensus 533 Gla~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 607 (664)
|+++....... ....+++.|+|||.+. ...++.++|||||||++|||+| |+.||..... ...+...+......
T Consensus 209 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~ 286 (333)
T 2i1m_A 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-NSKFYKLVKDGYQM 286 (333)
T ss_dssp GGGCCGGGCTTSEECSSCEECGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-SHHHHHHHHHTCCC
T ss_pred ccccccccccceeecCCCCCCccccCHHHhc-cCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-hHHHHHHHhcCCCC
Confidence 99986543321 1234577899999887 5678999999999999999999 9999876432 22333333332222
Q ss_pred CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 608 DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 608 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
. .+...+..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 287 ~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 287 A-QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp C-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1 12223456899999999999999999999999999886543
No 176
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=6.7e-40 Score=337.86 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=194.0
Q ss_pred hccccccCceeEEEEEEc--CC--eEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD--NR--LIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~--~~--~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
.+.||+|+||+||+|.+. ++ ..||+|+++..... ....+.+.+|++++++++||||+++++++.+.+ .++|+||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 468999999999999853 23 36899998754332 234578899999999999999999999997654 8999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 102 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 176 (291)
T 1u46_A 102 APLGSLLDRLRK----HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176 (291)
T ss_dssp CTTCBHHHHHHH----HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred ccCCCHHHHHHh----ccCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEcccccccccccccc
Confidence 999999999963 234689999999999999999999999 999999999999999999999999999987644321
Q ss_pred -----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHH
Q 006031 544 -----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617 (664)
Q Consensus 544 -----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (664)
....++..|+|||.+. ...++.++||||||+++|||++ |+.||... ...++...+.............+..
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (291)
T 1u46_A 177 HYVMQEHRKVPFAWCAPESLK-TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERLPRPEDCPQD 253 (291)
T ss_dssp EEEC-----CCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred chhhhccCCCCceeeCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCCCCCcCcCHH
Confidence 2234677899999986 5667899999999999999999 99999754 2334433333322222223344566
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 618 l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
+.+++.+||+.+|++|||+.++++.|+++....
T Consensus 254 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 254 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 899999999999999999999999999987544
No 177
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-40 Score=349.23 Aligned_cols=246 Identities=20% Similarity=0.276 Sum_probs=196.8
Q ss_pred hccccccCceeEEEEEE----cCCeEEEEEEccCccc--cCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL----DNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 57899999999999997 4789999999875432 112345677889999998 6999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 139 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 139 DYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp CCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 99999999999963 24689999999999999999999999 9999999999999999999999999999865332
Q ss_pred C---CCCCCCCCcccCccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC--hhhHHHHHHhhccCCCchhHHH
Q 006031 542 L---QDDDPDNLLYKAPETRNAS-HQATSKSDVYSFGVLLLELLTGKPPSQHSFLV--PNEMMNWVRSAREDDGAEDERL 615 (664)
Q Consensus 542 ~---~~~~~~~~~y~aPE~~~~~-~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 615 (664)
. .....||+.|+|||++.+. ..++.++|||||||++|||+||+.||...... ...+...+... ....+....
T Consensus 213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 290 (355)
T 1vzo_A 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 290 (355)
T ss_dssp GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC--CCCCCTTSC
T ss_pred CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc--CCCCCcccC
Confidence 1 1234689999999998742 34788999999999999999999999754322 12232222221 112233344
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006031 616 GMLLEVAIACNSASPEQRP-----TMWQVLKM 642 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RP-----t~~ev~~~ 642 (664)
..+.+++.+||+.||++|| ++.|+++.
T Consensus 291 ~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 5688999999999999999 99999864
No 178
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.8e-39 Score=359.47 Aligned_cols=242 Identities=18% Similarity=0.220 Sum_probs=199.3
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
++||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 57999999999999975 6899999999654321 234577889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC--CC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--DD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--~~ 545 (664)
+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 271 ~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~ 348 (543)
T 3c4z_A 271 DIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348 (543)
T ss_dssp BHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCC
T ss_pred CHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccccc
Confidence 9999996432 2245699999999999999999999999 999999999999999999999999999987654332 23
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--ChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL--VPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
..||+.|+|||++. +..++.++|||||||++|||+||+.||..... ...++...+.... ...+...+..+.+++.
T Consensus 349 ~~GT~~Y~APE~l~-~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~ 425 (543)
T 3c4z_A 349 YAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCE 425 (543)
T ss_dssp CCSCTTTSCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred ccCCccccChhhhc-CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc--cCCCcccCHHHHHHHH
Confidence 47999999999987 56789999999999999999999999976432 1223333332221 1223334556899999
Q ss_pred HcccCCCCCCCCH
Q 006031 624 ACNSASPEQRPTM 636 (664)
Q Consensus 624 ~Cl~~~P~~RPt~ 636 (664)
+||+.+|++||++
T Consensus 426 ~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 426 ALLQKDPEKRLGF 438 (543)
T ss_dssp HHSCSSGGGSCCC
T ss_pred HhccCCHhHCCCC
Confidence 9999999999975
No 179
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-39 Score=344.01 Aligned_cols=249 Identities=19% Similarity=0.250 Sum_probs=195.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHH-HcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMES-VGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|.. .+++.||||++...... .....+..|+.. ++.++||||+++++++.+.+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 46799999999999996 57899999999754332 233445555554 7889999999999999999999999999975
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-CC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~-~~ 545 (664)
+|.+++.... .....+++..+..|+.||+.||+|||+..+|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 135 -~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 212 (340)
T 3an0_A 135 -SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212 (340)
T ss_dssp -EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHHH
T ss_pred -cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccccccc
Confidence 9988885311 12457999999999999999999999855999999999999999999999999999976543321 12
Q ss_pred CCCCCcccCcccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNA---SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~---~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
..+|+.|+|||.+.. ...++.++|||||||++|||+||+.||.........+...+.... ........+..+.+++
T Consensus 213 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li 291 (340)
T 3an0_A 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS-PQLPADKFSAEFVDFT 291 (340)
T ss_dssp SSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC-CCCCGGGSCHHHHHHH
T ss_pred CCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC-CCCCcccCCHHHHHHH
Confidence 468999999998642 346789999999999999999999999753222223333332222 1122233456689999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+||+.+|++|||+.|+++
T Consensus 292 ~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 292 SQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHTCSSGGGSCCHHHHTT
T ss_pred HHHccCCcccCcCHHHHhc
Confidence 9999999999999999987
No 180
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=333.04 Aligned_cols=246 Identities=20% Similarity=0.299 Sum_probs=196.0
Q ss_pred ccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCCC
Q 006031 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
.+||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 4799999999999995 5688999999875432 445779999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-CCCeEEeeccccccccCCC--CCC
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP-DFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~-~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++....... ...
T Consensus 106 L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 999997432 234567889999999999999999999 9999999999999987 8999999999998654322 234
Q ss_pred CCCCCcccCccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNAS-HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~-~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+... ..++.++||||||+++|||++|+.||............ ..........+...+..+.+++.+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~ 261 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGMFKVHPEIPESMSAEAKAFILK 261 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH-HHHHCCCCCCCTTSCHHHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh-hccccccccccccCCHHHHHHHHH
Confidence 5689999999988633 23789999999999999999999998643221111111 111111222233345568999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~ 641 (664)
||+.+|++|||+.|+++
T Consensus 262 ~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 262 CFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTCSSTTTSCCHHHHHT
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999975
No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-39 Score=355.54 Aligned_cols=252 Identities=18% Similarity=0.227 Sum_probs=182.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec-----CCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA-----KEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lV~e 462 (664)
.+.||+|+||+||+|... +++.||||++..........+.+.+|++++++++|||||++++++.. .+..|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 468999999999999854 68899999996543322345678999999999999999999999844 356899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+ +|+|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 138 ~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 210 (458)
T 3rp9_A 138 IA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210 (458)
T ss_dssp CC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred cc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence 98 5799999953 35699999999999999999999999 99999999999999999999999999998754221
Q ss_pred -----------------------------CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-----------
Q 006031 543 -----------------------------QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT----------- 582 (664)
Q Consensus 543 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt----------- 582 (664)
.....||+.|+|||++.....++.++|||||||++|||+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~ 290 (458)
T 3rp9_A 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290 (458)
T ss_dssp TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence 1223579999999987556779999999999999999999
Q ss_pred CCCCCCCCCCCh------------------hh-HHHHHHhhccCC----------------------------CchhHHH
Q 006031 583 GKPPSQHSFLVP------------------NE-MMNWVRSAREDD----------------------------GAEDERL 615 (664)
Q Consensus 583 G~~P~~~~~~~~------------------~~-~~~~~~~~~~~~----------------------------~~~~~~~ 615 (664)
|+++|.+....+ .+ +........... .......
T Consensus 291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 370 (458)
T 3rp9_A 291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS 370 (458)
T ss_dssp CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence 566664421100 00 100100000000 0011224
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 006031 616 GMLLEVAIACNSASPEQRPTMWQVLKM--LQEIK 647 (664)
Q Consensus 616 ~~l~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~ 647 (664)
..+.+|+.+||+.||++|||++|+++. ++++.
T Consensus 371 ~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 371 ADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 568899999999999999999999873 44443
No 182
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.5e-40 Score=337.11 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=199.6
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec--CCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA--KEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~ 465 (664)
.+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 467999999999999965 68899999997655433445779999999999999999999998753 567899999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----cccCCCCCCCeEeCCCCCeEEeeccccccccC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR-----LVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~-----ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 540 (664)
+|+|.+++.... .....+++..+..|+.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 91 GGDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 999999996422 1234589999999999999999999998 7 99999999999999999999999999976543
Q ss_pred CCC--CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 541 SLQ--DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 541 ~~~--~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
... ....++..|+|||.+. ...++.++||||||+++|||+||+.||... ...++...+...... ..+...+..+
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l 244 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR-RIPYRYSDEL 244 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHH-CC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC-CCCTTSCHHH
T ss_pred ccccccccCCCccccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccc-cCCcccCHHH
Confidence 321 1234788999999987 567899999999999999999999999764 233343333332221 1222344568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHH
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKMLQ 644 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~L~ 644 (664)
.+++.+||+.+|++|||+.|+++.+.
T Consensus 245 ~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 245 NEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHcCCCcccCCCHHHHHhChh
Confidence 99999999999999999999998653
No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5e-39 Score=328.79 Aligned_cols=244 Identities=21% Similarity=0.322 Sum_probs=193.5
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|++.+++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 468999999999999975 688999999865432 223467889999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~ 545 (664)
++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 96 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 169 (276)
T 2h6d_A 96 GELFDYICK-----HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169 (276)
T ss_dssp CBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred CcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence 999999953 24589999999999999999999999 99999999999999999999999999998765432 233
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..+++.|+|||.+.+....+.++||||||+++|||++|+.||... ....+.+.+...... .+......+.+++.+|
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~ 245 (276)
T 2h6d_A 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVFY--IPEYLNRSVATLLMHM 245 (276)
T ss_dssp -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHH
T ss_pred ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCccc--CchhcCHHHHHHHHHH
Confidence 468899999999874444478999999999999999999999753 222333333322211 1222345588999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 006031 626 NSASPEQRPTMWQVLKM 642 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~~ 642 (664)
|+.+|++|||+.|+++.
T Consensus 246 l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 246 LQVDPLKRATIKDIREH 262 (276)
T ss_dssp TCSSGGGSCCHHHHHHS
T ss_pred ccCChhhCCCHHHHHhC
Confidence 99999999999999874
No 184
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=334.93 Aligned_cols=246 Identities=19% Similarity=0.254 Sum_probs=191.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc---CCcHHHHHHHHHHHcCC---CCCCcccceEEEecCC-----c
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA---GTSNEMYEQHMESVGGL---RHPNLVPLRAYFQAKE-----E 456 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~-----~ 456 (664)
.+.||+|+||+||+|.. .+++.||+|++...... ......+.+|+++++++ +||||++++++|...+ .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46799999999999995 56889999998643321 12234566777776666 4999999999998755 4
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 457 RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 457 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
.++||||+. |+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 168 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLAR 168 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred EEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence 799999997 5999999642 234499999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC-CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC------
Q 006031 537 LTADSLQ-DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG------ 609 (664)
Q Consensus 537 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~------ 609 (664)
....... ....+|+.|+|||.+. ...++.++|||||||++|||++|+.||..... ...+............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 169 IYSYQMALTPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TSTTCCCSGGGGCCCSSCCHHHHH-TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccCCCcccCCccccccccCchHHc-CCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChhhccch
Confidence 6644322 2346899999999987 56789999999999999999999999976321 1122222221111000
Q ss_pred ------------------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 ------------------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 ------------------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
...+....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00123456889999999999999999999875
No 185
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.7e-39 Score=354.45 Aligned_cols=243 Identities=17% Similarity=0.210 Sum_probs=188.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC------CceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK------EERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lV~ 461 (664)
.+.||+|+||+||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++... ...|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 46899999999999985 4689999999976543334456788999999999999999999999654 3579999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 147 E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 217 (464)
T 3ttj_A 147 ELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217 (464)
T ss_dssp ECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred eCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence 99976 5777773 2389999999999999999999999 9999999999999999999999999999876544
Q ss_pred C-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC-------------
Q 006031 542 L-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED------------- 607 (664)
Q Consensus 542 ~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~------------- 607 (664)
. .....+|+.|+|||.+. +..++.++|||||||++|||++|+.||.+... ...+...+.....+
T Consensus 218 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 218 FMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp CCC----CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred cccCCCcccccccCHHHHc-CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 2 23457899999999987 56789999999999999999999999976421 11111111111100
Q ss_pred ---------CC-----------------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 608 ---------DG-----------------AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 608 ---------~~-----------------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.. ........+.+++.+||+.||++|||++|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 011124568999999999999999999999863
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.6e-39 Score=332.78 Aligned_cols=242 Identities=26% Similarity=0.412 Sum_probs=201.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 46899999999999985 4688999999875443 245678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 99999942 4689999999999999999999999 99999999999999999999999999997765432 234
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 625 (664)
..++..|+|||.+. ...++.++||||||+++|||++|+.||... ........+...... ......+..+.+++.+|
T Consensus 179 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~ 254 (303)
T 3a7i_A 179 FVGTPFWMAPEVIK-QSAYDSKADIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNNPP-TLEGNYSKPLKEFVEAC 254 (303)
T ss_dssp CCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC-CCCSSCCHHHHHHHHHH
T ss_pred cCCCcCccCHHHHh-cCCCCchhhhHHHHHHHHHHccCCCCCCCc--CHHHHHHHhhcCCCC-CCccccCHHHHHHHHHH
Confidence 56889999999987 567889999999999999999999998753 222333333222211 12223345589999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 006031 626 NSASPEQRPTMWQVLKM 642 (664)
Q Consensus 626 l~~~P~~RPt~~ev~~~ 642 (664)
|+.+|++|||+.|+++.
T Consensus 255 l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 255 LNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCSSGGGSCCHHHHTTC
T ss_pred cCCChhhCcCHHHHhhC
Confidence 99999999999999874
No 187
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9e-39 Score=330.85 Aligned_cols=247 Identities=19% Similarity=0.268 Sum_probs=195.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++...+..++||||+. |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 367999999999999975 68899999997654433445778899999999999999999999999999999999997 6
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 87 ~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (299)
T 2r3i_A 87 DLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162 (299)
T ss_dssp EHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTS
T ss_pred CHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCc
Confidence 999999642 234689999999999999999999999 99999999999999999999999999997654332 223
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC----------------
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG---------------- 609 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---------------- 609 (664)
..++..|+|||.+.+...++.++||||||+++|||+||+.||..... ...+............
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCchhhhhHhhcCcccchhh
Confidence 45789999999987555589999999999999999999999976421 1122222222111100
Q ss_pred ----------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 610 ----------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 610 ----------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
........+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00112356889999999999999999999986
No 188
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=353.34 Aligned_cols=245 Identities=14% Similarity=0.158 Sum_probs=195.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||+||+++.+ +++.||+|++++... .....+.+.+|.+++.+++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 468999999999999974 689999999965322 112234578899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC---C
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL---Q 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---~ 543 (664)
|+|.++++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++...... .
T Consensus 146 g~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 146 GDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 9999999632 24689999999999999999999998 99999999999999999999999999998764432 1
Q ss_pred CCCCCCCcccCcccccc------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhh---ccCCCchhHH
Q 006031 544 DDDPDNLLYKAPETRNA------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA---REDDGAEDER 614 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 614 (664)
....||+.|+|||++.. ...++.++|||||||++|||++|+.||... ...+....+... ..........
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~~ 298 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIVHYKEHLSLPLVDEGV 298 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCCC----CC
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccCcCCCccccCC
Confidence 23579999999998862 346789999999999999999999999763 222222222111 1111111223
Q ss_pred HHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 006031 615 LGMLLEVAIACNSASPEQR---PTMWQVLK 641 (664)
Q Consensus 615 ~~~l~~l~~~Cl~~~P~~R---Pt~~ev~~ 641 (664)
+..+.+++.+||. +|++| |++.|+.+
T Consensus 299 s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 299 PEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 4568999999998 99998 58988865
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=341.59 Aligned_cols=252 Identities=18% Similarity=0.275 Sum_probs=193.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||+||+|... +++.||+|++...... .....+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 367999999999999975 6889999998644321 111235578999999999999999999999999999999997 5
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 85 ~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 85 DLKQYLDD----CGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 99999864 234689999999999999999999999 99999999999999999999999999997654322 223
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhh-ccCCC---------------
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA-REDDG--------------- 609 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~-~~~~~--------------- 609 (664)
..+|..|+|||.+.+...++.++|||||||++|||++|+.||.... ..+....+... .....
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 4679999999998755678999999999999999999999997642 22222222211 11100
Q ss_pred ------------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhcc
Q 006031 610 ------------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK--MLQEIKGA 649 (664)
Q Consensus 610 ------------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~~~ 649 (664)
........+.+++.+||+.||++|||++|+++ .+.++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 00112355789999999999999999999987 34555443
No 190
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-39 Score=342.61 Aligned_cols=247 Identities=17% Similarity=0.248 Sum_probs=202.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCc---------------HHHHHHHHHHHcCCCCCCcccceEEEec
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTS---------------NEMYEQHMESVGGLRHPNLVPLRAYFQA 453 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~---------------~~~~~~e~~~l~~l~H~niv~l~g~~~~ 453 (664)
.+.||+|+||.||+|.. +++.||+|.+......... .+.+.+|++++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 46899999999999999 8999999998654332111 1789999999999999999999999999
Q ss_pred CCceEEEEecCCCCCHHHH------hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCCCeEeCCCCC
Q 006031 454 KEERLLIYDYQPNGSLFSL------IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ-AWRLVHGNLKSSNVLLGPDFE 526 (664)
Q Consensus 454 ~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~ivHrDlk~~NILl~~~~~ 526 (664)
.+..++||||+++|+|.++ +.. .....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDK---NYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCS---SSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECTTSC
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhh---ccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcCCCc
Confidence 9999999999999999998 532 224679999999999999999999999 7 9999999999999999999
Q ss_pred eEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhc
Q 006031 527 ACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATS-KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAR 605 (664)
Q Consensus 527 ~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 605 (664)
+||+|||.+............++..|+|||.+.+...++. ++||||||+++|||++|+.||...... .++...+....
T Consensus 191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i~~~~ 269 (348)
T 2pml_X 191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNIRTKN 269 (348)
T ss_dssp EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHHTSCC
T ss_pred EEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccC
Confidence 9999999998765554455678999999999874435555 999999999999999999999764321 33333332221
Q ss_pred cCCCc-----------------hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 606 EDDGA-----------------EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 606 ~~~~~-----------------~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..... ....+..+.+++.+||+.+|++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110 0234456899999999999999999999986
No 191
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-39 Score=340.49 Aligned_cols=247 Identities=24% Similarity=0.277 Sum_probs=194.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC---CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG---TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 464 (664)
.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 468999999999999964 58899999997543211 11246789999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-- 542 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 542 (664)
++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 95 ET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp SE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred CC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 86 89998853 335689999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC-------------
Q 006031 543 QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG------------- 609 (664)
Q Consensus 543 ~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~------------- 609 (664)
.....+|+.|+|||.+.+...++.++|||||||++|||++|++||.... ....+............
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-DLDQLTRIFETLGTPTEEQWPDMCSLPDYV 247 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence 2345689999999998755668999999999999999999999987532 11222222221111100
Q ss_pred --------c----hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 610 --------A----EDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 610 --------~----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
. .......+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 01223568999999999999999999999864
No 192
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-39 Score=341.99 Aligned_cols=249 Identities=20% Similarity=0.254 Sum_probs=192.3
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC------ceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE------ERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 46799999999999996 56899999999654332233567889999999999999999999997653 469999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 110 e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 181 (367)
T 1cm8_A 110 PFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181 (367)
T ss_dssp ECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred ecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccccc
Confidence 999 8899999963 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-------------
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD------------- 608 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~------------- 608 (664)
.....+|+.|+|||.+.+...++.++||||+||++|||++|+.||..... ...+...........
T Consensus 182 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 182 -MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp -CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred -cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 23457899999999987557789999999999999999999999976421 111111111111000
Q ss_pred ------------C---chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 006031 609 ------------G---AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM--LQEIK 647 (664)
Q Consensus 609 ------------~---~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~ 647 (664)
. ........+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 011224568899999999999999999999873 44443
No 193
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.7e-39 Score=333.17 Aligned_cols=243 Identities=21% Similarity=0.315 Sum_probs=199.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 468999999999999975 57889999986543221 2356788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQD 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~~ 544 (664)
++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 100 ~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (294)
T 2rku_A 100 RSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173 (294)
T ss_dssp CBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence 999999853 34689999999999999999999999 9999999999999999999999999999865432 223
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...++..|+|||.+. ...++.++||||||+++|||+||+.||.... ..+....+... ....+......+.+++.+
T Consensus 174 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~li~~ 248 (294)
T 2rku_A 174 VLCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKKN--EYSIPKHINPVAASLIQK 248 (294)
T ss_dssp CCCSCCSSCCHHHHT-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTT--CCCCCTTSCHHHHHHHHH
T ss_pred cccCCCCcCCcchhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhhc--cCCCccccCHHHHHHHHH
Confidence 356889999999986 5678999999999999999999999997532 22222222111 111222334568899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~ 642 (664)
||+.+|++|||+.|+++.
T Consensus 249 ~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 249 MLQTDPTARPTINELLND 266 (294)
T ss_dssp HTCSSGGGSCCGGGGGGS
T ss_pred HcccChhhCcCHHHHhhC
Confidence 999999999999999874
No 194
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.4e-39 Score=350.53 Aligned_cols=253 Identities=18% Similarity=0.234 Sum_probs=193.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC-----CceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK-----EERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e 462 (664)
.+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++... +..|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 46899999999999996 4588999999975433223456789999999999999999999999766 57899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+. |+|.+++.. ...+++..+..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 111 ~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 111 IAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183 (432)
T ss_dssp CCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred cCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence 986 599999953 35699999999999999999999999 99999999999999999999999999998754321
Q ss_pred ------------------------CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCC----------
Q 006031 543 ------------------------QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQ---------- 588 (664)
Q Consensus 543 ------------------------~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~---------- 588 (664)
.....+|+.|+|||.+.....++.++|||||||++|||++|..||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f 263 (432)
T 3n9x_A 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF 263 (432)
T ss_dssp ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSC
T ss_pred cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccC
Confidence 1345689999999987556779999999999999999998555443
Q ss_pred -CCCCC----------------hhh-----------------------HHHHHHhhccCCCc-----hhHHHHHHHHHHH
Q 006031 589 -HSFLV----------------PNE-----------------------MMNWVRSAREDDGA-----EDERLGMLLEVAI 623 (664)
Q Consensus 589 -~~~~~----------------~~~-----------------------~~~~~~~~~~~~~~-----~~~~~~~l~~l~~ 623 (664)
+.... ... ...++......... .......+.+++.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~ 343 (432)
T 3n9x_A 264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLE 343 (432)
T ss_dssp CCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred CCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 21100 000 11111111111000 0123456889999
Q ss_pred HcccCCCCCCCCHHHHHHH--HHhhhc
Q 006031 624 ACNSASPEQRPTMWQVLKM--LQEIKG 648 (664)
Q Consensus 624 ~Cl~~~P~~RPt~~ev~~~--L~~i~~ 648 (664)
+||+.||++|||+.|+++. +++++.
T Consensus 344 ~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 344 SMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp HHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred HHhcCCcccCCCHHHHhcChhhhhccC
Confidence 9999999999999999873 455543
No 195
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.9e-39 Score=338.37 Aligned_cols=256 Identities=22% Similarity=0.323 Sum_probs=202.5
Q ss_pred hccccccCceeEEEEEE------cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.+.||+|+||.||+|.. .++..||||.+..... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 46899999999999984 3467899999964322 2345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeecccccc
Q 006031 463 YQPNGSLFSLIHGSKS--TRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTAL 537 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~ 537 (664)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+|||++. +..+||+|||+++.
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 9999999999975321 1224589999999999999999999999 9999999999999984 45699999999975
Q ss_pred ccCCCC----CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 538 TADSLQ----DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 538 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
...... ....+++.|+|||.+. ...++.++||||||+++|||+| |+.||... ...++...+....... ...
T Consensus 193 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~-~~~ 268 (327)
T 2yfx_A 193 IYRASYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGRMD-PPK 268 (327)
T ss_dssp HHC------CCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCC-CCT
T ss_pred cccccccccCCCcCCCcceeCHhHhc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcCCCCC-CCC
Confidence 433221 1234678999999986 5678999999999999999999 99998753 2334444444332221 222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..+..+.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 269 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 34456899999999999999999999999999886544
No 196
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.1e-39 Score=357.83 Aligned_cols=243 Identities=25% Similarity=0.346 Sum_probs=203.1
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcccc-CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA-GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||.||+|... +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999965 7889999999655432 34578899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~ 543 (664)
|+|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 111 ~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 111 GELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp CBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 999999953 35699999999999999999999999 99999999999999 5678999999999986644321
Q ss_pred -CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHH
Q 006031 544 -DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLE 620 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 620 (664)
....||+.|+|||.+. +.++.++||||+||++|||++|+.||... ...++...+....... +.....+..+.+
T Consensus 185 ~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 185 MKDKIGTAYYIAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFELPQWKKVSESAKD 260 (484)
T ss_dssp HHHHTTGGGTCCHHHHH--TCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCSGGGGGSCHHHHH
T ss_pred cccCCCCccccCceeec--CCCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCCcccccCCHHHHH
Confidence 2346899999999986 36899999999999999999999999763 2334444443332222 122344566899
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 006031 621 VAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
++.+||+.+|++|||+.|+++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhh
Confidence 999999999999999999986
No 197
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.8e-39 Score=334.22 Aligned_cols=245 Identities=20% Similarity=0.314 Sum_probs=194.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 101 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 101 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCC
Confidence 467999999999999975 588999999865432 45678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~~~ 545 (664)
+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...... ....
T Consensus 102 ~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 102 AVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp EHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred cHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999863 234689999999999999999999999 9999999999999999999999999997543221 1223
Q ss_pred CCCCCcccCccccc----cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRN----ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 546 ~~~~~~y~aPE~~~----~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
..++..|+|||.+. ....++.++||||||+++|||++|+.||..... ...+.............+...+..+.++
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l 255 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPTLLTPSKWSVEFRDF 255 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-HHHHHHHhccCCcccCCccccCHHHHHH
Confidence 46889999999873 256678999999999999999999999875321 1122222222222222233445668999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.+|++|||+.|+++
T Consensus 256 i~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 256 LKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHcccChhhCCCHHHHhc
Confidence 99999999999999999975
No 198
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.7e-39 Score=339.87 Aligned_cols=243 Identities=21% Similarity=0.312 Sum_probs=199.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||++... +++.||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 468999999999999965 47889999986543321 2356788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC--CCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQD 544 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--~~~ 544 (664)
++|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 126 ~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (335)
T 2owb_A 126 RSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199 (335)
T ss_dssp CBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence 999999853 34689999999999999999999999 9999999999999999999999999999865432 223
Q ss_pred CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 006031 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 545 ~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 624 (664)
...++..|+|||.+. ...++.++||||||+++|||++|+.||.... ..+....+.... ...+......+.+++.+
T Consensus 200 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~li~~ 274 (335)
T 2owb_A 200 VLCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKKNE--YSIPKHINPVAASLIQK 274 (335)
T ss_dssp CCCSCCSSCCHHHHH-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHTC--CCCCTTSCHHHHHHHHH
T ss_pred ccCCCccccCHHHhc-cCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHhcCC--CCCCccCCHHHHHHHHH
Confidence 456899999999987 5678999999999999999999999997532 222222222111 11222334558899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~~ 642 (664)
||+.||++|||+.|+++.
T Consensus 275 ~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 275 MLQTDPTARPTINELLND 292 (335)
T ss_dssp HTCSSGGGSCCGGGGGGS
T ss_pred HccCChhHCcCHHHHhcC
Confidence 999999999999999863
No 199
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-38 Score=355.03 Aligned_cols=243 Identities=21% Similarity=0.307 Sum_probs=197.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-----------CcHHHHHHHHHHHcCCCCCCcccceEEEecCCc
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-----------TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE 456 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-----------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 456 (664)
.+.||+|+||+||+|... ++..||+|++....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 468999999999999965 57899999997544321 345778999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC---CeEEeecc
Q 006031 457 RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF---EACLADYC 533 (664)
Q Consensus 457 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~---~~ki~DfG 533 (664)
.++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 121 ~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 9999999999999999953 34699999999999999999999999 999999999999998775 69999999
Q ss_pred ccccccCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc--
Q 006031 534 LTALTADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA-- 610 (664)
Q Consensus 534 la~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-- 610 (664)
+++...... .....||+.|+|||.+. ..++.++||||+||++|||++|+.||... ...++...+.........
T Consensus 195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~ 270 (504)
T 3q5i_A 195 LSSFFSKDYKLRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIKKVEKGKYYFDFND 270 (504)
T ss_dssp TCEECCTTSCBCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHHH
T ss_pred CCEEcCCCCccccccCCcCCCCHHHhc--cCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCccc
Confidence 998765432 23457899999999985 46899999999999999999999999763 233444444333222111
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
....+..+.+++.+||+.+|++|||+.|+++
T Consensus 271 ~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 271 WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1223456899999999999999999999985
No 200
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.8e-39 Score=340.57 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=193.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|.++.... ...+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 478999999999999965 688999999965432 234677777776 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC----CCeEEeeccccccccCC-
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD----FEACLADYCLTALTADS- 541 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~----~~~ki~DfGla~~~~~~- 541 (664)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++.....
T Consensus 101 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 101 GELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999953 35689999999999999999999999 99999999999998543 34999999999865443
Q ss_pred -CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-ChhhHHHHHHhhccCCC--chhHHHHH
Q 006031 542 -LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL-VPNEMMNWVRSAREDDG--AEDERLGM 617 (664)
Q Consensus 542 -~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~ 617 (664)
......+|+.|+|||.+. ...++.++|||||||++|||++|+.||..... ...++...+........ ........
T Consensus 175 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHH
T ss_pred CceeccCCCccccCHHHhc-CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHH
Confidence 223456899999999986 45578899999999999999999999975322 23344444433222211 12334566
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 006031 618 LLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 618 l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 899999999999999999999886
No 201
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.9e-39 Score=342.39 Aligned_cols=244 Identities=20% Similarity=0.319 Sum_probs=198.3
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccccC------CcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEE
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG------TSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 461 (664)
+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 78999999999999975 68999999986543211 1135678999999998 7999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 180 e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 180 DLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253 (365)
T ss_dssp CCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence 99999999999953 34689999999999999999999999 9999999999999999999999999999866543
Q ss_pred -CCCCCCCCCcccCcccccc-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCc--hhH
Q 006031 542 -LQDDDPDNLLYKAPETRNA-----SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA--EDE 613 (664)
Q Consensus 542 -~~~~~~~~~~y~aPE~~~~-----~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 613 (664)
......||+.|+|||++.+ ...++.++|||||||++|||+||+.||... ........+......... ...
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~ 331 (365)
T 2y7j_A 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSSPEWDD 331 (365)
T ss_dssp CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCHHHHSS
T ss_pred cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCCccccc
Confidence 2334578999999998752 235788999999999999999999999753 222333333222221111 112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 614 RLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 614 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 332 ~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 332 RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3456899999999999999999999986
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.8e-40 Score=354.26 Aligned_cols=248 Identities=13% Similarity=0.147 Sum_probs=188.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccc-cCCcHHHHHHHH---HHHcCCCCCCcccce-------EEEecCC-
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL-AGTSNEMYEQHM---ESVGGLRHPNLVPLR-------AYFQAKE- 455 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~~- 455 (664)
.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+ +.+++++|||||+++ +++.+.+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46899999999999995 5689999999975432 223457899999 566777899999998 6665543
Q ss_pred ----------------ceEEEEecCCCCCHHHHhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 006031 456 ----------------ERLLIYDYQPNGSLFSLIHGSK--STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSS 517 (664)
Q Consensus 456 ----------------~~~lV~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~ 517 (664)
..++||||+ +|+|.+++.... ......++|..+..|+.||+.||+|||+. +|+||||||+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDikp~ 235 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYLRPV 235 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGG
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHH
Confidence 278999999 689999996421 11123455788999999999999999999 9999999999
Q ss_pred CeEeCCCCCeEEeeccccccccCCCCCCCCCCCcccCccccccC----------CCCCchhhHHHHHHHHHHHHcCCCCC
Q 006031 518 NVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNAS----------HQATSKSDVYSFGVLLLELLTGKPPS 587 (664)
Q Consensus 518 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~ksDVwSfGvvl~elltG~~P~ 587 (664)
|||++.++.+||+|||+++...... ....| +.|+|||.+... ..++.++|||||||++|||+||+.||
T Consensus 236 NIll~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf 313 (377)
T 3byv_A 236 DIVLDQRGGVFLTGFEHLVRDGARV-VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI 313 (377)
T ss_dssp GEEECTTCCEEECCGGGCEETTCEE-ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HEEEcCCCCEEEEechhheecCCcc-cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999998654322 23456 899999998733 26899999999999999999999999
Q ss_pred CCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhc
Q 006031 588 QHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK--MLQEIKG 648 (664)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~~ 648 (664)
...... .....+ ... ....+..+.+++.+||+.||++|||+.|+++ .++++++
T Consensus 314 ~~~~~~--~~~~~~---~~~---~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 314 TKDAAL--GGSEWI---FRS---CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp --------CCSGGG---GSS---CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred cccccc--cchhhh---hhh---ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence 753211 111111 111 1122345889999999999999999999986 4455443
No 203
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=331.83 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=195.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 109 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAG 109 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCC
Confidence 468999999999999975 48899999986532 3467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--CCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDD 545 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--~~~ 545 (664)
+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... ...
T Consensus 110 ~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 110 SVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp EHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 99999952 235689999999999999999999999 99999999999999999999999999997665432 233
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhcc-CCCchhHHHHHHHHHHHH
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE-DDGAEDERLGMLLEVAIA 624 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~ 624 (664)
..++..|+|||.+. ...++.++||||||+++|||++|+.||.... ............. ....+...+..+.+++.+
T Consensus 185 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 185 VIGTPFWMAPEVIQ-EIGYNCVADIWSLGITAIEMAEGKPPYADIH--PMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp CCSCGGGCCHHHHS-SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred cCCCCCccChhhcC-CCCCCccccHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence 56889999999987 5678999999999999999999999997532 2222222211111 112233345668999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 006031 625 CNSASPEQRPTMWQVLK 641 (664)
Q Consensus 625 Cl~~~P~~RPt~~ev~~ 641 (664)
||+.+|++|||+.|+++
T Consensus 262 ~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 262 CLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HTCSCTTTSCCHHHHTT
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999976
No 204
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=338.78 Aligned_cols=251 Identities=22% Similarity=0.303 Sum_probs=183.0
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEe--------cCCce
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQ--------AKEER 457 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~--------~~~~~ 457 (664)
..++||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++.++. ||||+++++++. .....
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE--EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH--HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCch--HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 357899999999999996 4688999999854322 34567889999999996 999999999984 33357
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCeEeCCCCCeEEeecccc
Q 006031 458 LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR--LVHGNLKSSNVLLGPDFEACLADYCLT 535 (664)
Q Consensus 458 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--ivHrDlk~~NILl~~~~~~ki~DfGla 535 (664)
++|+||+. |+|.+++.... ....+++..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 89999996 79999885321 234699999999999999999999998 7 999999999999999999999999999
Q ss_pred ccccCCCC--------------CCCCCCCcccCccccc--cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHH
Q 006031 536 ALTADSLQ--------------DDDPDNLLYKAPETRN--ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMN 599 (664)
Q Consensus 536 ~~~~~~~~--------------~~~~~~~~y~aPE~~~--~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~ 599 (664)
+....... ....+++.|+|||.+. ....++.++|||||||++|||+||+.||..... ..+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~ 263 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRIVN 263 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHhhc
Confidence 87644221 1234788999999873 255678999999999999999999999975321 11111
Q ss_pred HHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 600 WVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
..... .........+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 264 ---~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 264 ---GKYSI-PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----CCC-CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---CcccC-CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111 111112234789999999999999999999999999997654
No 205
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=349.56 Aligned_cols=247 Identities=19% Similarity=0.287 Sum_probs=180.6
Q ss_pred hccccccCceeEEEEEEc---CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec--CCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD---NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA--KEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~ 463 (664)
+++||+|+||+||+|... +++.||+|++.... ....+.+|++++++++||||+++++++.. ....++||||
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 568999999999999975 57889999996543 23568899999999999999999999954 6688999999
Q ss_pred CCCCCHHHHhccCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe----CCCCCeEEeecccc
Q 006031 464 QPNGSLFSLIHGSK----STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLT 535 (664)
Q Consensus 464 ~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla 535 (664)
+. |+|.+++.... ......+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 96 58888775211 12233599999999999999999999999 99999999999999 77899999999999
Q ss_pred ccccCCC-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC--------hhhHHHHHH
Q 006031 536 ALTADSL-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV--------PNEMMNWVR 602 (664)
Q Consensus 536 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~--------~~~~~~~~~ 602 (664)
+...... .....+|+.|+|||++.+...++.++|||||||++|||+||+.||...... ...+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 8765421 123468999999999875566899999999999999999999999653221 112222221
Q ss_pred hhccCCC---------------------------chh--------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 603 SAREDDG---------------------------AED--------ERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 603 ~~~~~~~---------------------------~~~--------~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
....... ... .....+.+|+.+||+.||++|||++|+++
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111110 000 00345789999999999999999999986
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.5e-39 Score=334.35 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=181.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 46899999999999984 4688999999865432 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhccC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC--
Q 006031 468 SLFSLIHGS---KSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-- 542 (664)
Q Consensus 468 sL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 542 (664)
+|.+++... .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 999998531 112345689999999999999999999999 99999999999999999999999999987654321
Q ss_pred -----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-------Cc
Q 006031 543 -----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD-------GA 610 (664)
Q Consensus 543 -----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-------~~ 610 (664)
.....+++.|+|||.+.....++.++||||||+++|||+||+.||...... .............. ..
T Consensus 178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (303)
T 2vwi_A 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-KVLMLTLQNDPPSLETGVQDKEM 256 (303)
T ss_dssp ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-GHHHHHHTSSCCCTTC-----CC
T ss_pred cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-hHHHHHhccCCCccccccccchh
Confidence 123458899999998864456899999999999999999999999764221 11111111111110 01
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.......+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1223356889999999999999999999986
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.4e-38 Score=332.50 Aligned_cols=239 Identities=17% Similarity=0.235 Sum_probs=194.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEec--CCceEEEEecC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQA--KEERLLIYDYQ 464 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~e~~ 464 (664)
.+.||+|+||+||+|.. .+++.||+|+++. ...+.+.+|++++++++ ||||+++++++.+ ....++||||+
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 46899999999999985 5788999999863 34578999999999997 9999999999987 56789999999
Q ss_pred CCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC-CeEEeeccccccccCCC-
Q 006031 465 PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSL- 542 (664)
Q Consensus 465 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~~- 542 (664)
++++|.++++ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 116 ~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 116 NNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp CCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999984 388999999999999999999999 999999999999999776 89999999998654432
Q ss_pred CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHH------------hhccCC--
Q 006031 543 QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR------------SAREDD-- 608 (664)
Q Consensus 543 ~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~------------~~~~~~-- 608 (664)
.....++..|+|||.+.....++.++|||||||++|||++|+.||.........+..... ......
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 234568899999999875577899999999999999999999999654332222222111 111000
Q ss_pred --------------------CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 --------------------GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 --------------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.........+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 001113566899999999999999999999986
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-38 Score=338.25 Aligned_cols=243 Identities=16% Similarity=0.193 Sum_probs=185.4
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCC------ceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE------ERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 46899999999999985 46889999999754332234567889999999999999999999997655 689999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++ +|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 110 e~~~~-~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 180 (371)
T 2xrw_A 110 ELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180 (371)
T ss_dssp ECCSE-EHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC-------
T ss_pred EcCCC-CHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeecccccccc
Confidence 99975 8888884 2488999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhc---------------
Q 006031 542 L-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAR--------------- 605 (664)
Q Consensus 542 ~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~--------------- 605 (664)
. .....+|+.|+|||.+. ...++.++|||||||++|||++|+.||..... ...+...+....
T Consensus 181 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 181 FMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ---------CTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccCCceecCCccCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 2 23356899999999987 56789999999999999999999999976321 111111111000
Q ss_pred -------cCC---------------C--chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 606 -------EDD---------------G--AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 606 -------~~~---------------~--~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
... . ........+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 0 011235678999999999999999999999863
No 209
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.7e-39 Score=341.54 Aligned_cols=244 Identities=21% Similarity=0.255 Sum_probs=178.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC------CceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK------EERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 46899999999999985 5689999999965433223456788999999999999999999998654 5679999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~ 185 (367)
T 2fst_X 114 HLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185 (367)
T ss_dssp ECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred ccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence 999 6899998842 4699999999999999999999999 9999999999999999999999999999875543
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC--------------
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED-------------- 607 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-------------- 607 (664)
. ....+|..|+|||.+.+...++.++|||||||++|||++|+.||.+... ...+.........+
T Consensus 186 ~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 186 M-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred C-CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 2 3356899999999987557789999999999999999999999976421 11111111111110
Q ss_pred ---------CC-ch----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 608 ---------DG-AE----DERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 608 ---------~~-~~----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.. .. ......+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 00 1123458899999999999999999999863
No 210
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.2e-38 Score=346.60 Aligned_cols=251 Identities=15% Similarity=0.193 Sum_probs=199.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCC-CCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH-PNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.++||+|+||.||+|.. .+++.||||++..... ...+.+|+++++.++| +++..+..++.+.+..++||||+ +
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g 86 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G 86 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-C
Confidence 46899999999999995 5688999998765432 2347889999999987 45556666667788889999999 9
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe---CCCCCeEEeeccccccccCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~ 543 (664)
++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 87 ~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 87 PSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp CBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9999999632 34699999999999999999999999 99999999999999 6889999999999987654322
Q ss_pred ---------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-hhHHH-HHHhhccCC--Cc
Q 006031 544 ---------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP-NEMMN-WVRSAREDD--GA 610 (664)
Q Consensus 544 ---------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~-~~~~~-~~~~~~~~~--~~ 610 (664)
....||..|+|||.+. ...++.++|||||||++|||++|+.||....... .+... ......... ..
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccCCCccccCHHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence 1356899999999987 6678999999999999999999999998653321 12222 211111111 01
Q ss_pred hhHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 611 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
....+.++.+++..||+.+|++||++.+|++.|+++....
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1223456899999999999999999999999999986543
No 211
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.3e-38 Score=343.79 Aligned_cols=242 Identities=21% Similarity=0.266 Sum_probs=191.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCC------CCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL------RHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.++||+|+||+||+|... +++.||||++.... ...+.+.+|+++++.+ +|+||+++++++...+..++||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 178 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence 478999999999999864 58999999996532 2345667777776655 6779999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC--eEEeecccccccc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE--ACLADYCLTALTA 539 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~~~ 539 (664)
||+. ++|.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||++....
T Consensus 179 e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 179 ELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp CCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred eccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9996 6999999642 234589999999999999999999999 9999999999999999987 9999999997654
Q ss_pred CCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-----------
Q 006031 540 DSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD----------- 608 (664)
Q Consensus 540 ~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----------- 608 (664)
... ....+|+.|+|||++. ...++.++|||||||++|||+||++||..... ...+...+.......
T Consensus 254 ~~~-~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~ 330 (429)
T 3kvw_A 254 QRV-YTYIQSRFYRAPEVIL-GARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKLLDASKRAK 330 (429)
T ss_dssp CCC-CSSCSCGGGCCHHHHH-TBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTBTTHH
T ss_pred Ccc-cccCCCCCccChHHHh-CCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHhhhhhh
Confidence 432 3457899999999987 56789999999999999999999999976421 112222221110000
Q ss_pred --------------------------------------C--ch-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 --------------------------------------G--AE-----DERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 --------------------------------------~--~~-----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
. .. ......+.+++.+||+.||++|||+.|+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 331 NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 0 00 011345889999999999999999999986
No 212
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.3e-38 Score=337.32 Aligned_cols=247 Identities=19% Similarity=0.253 Sum_probs=188.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCC---------cHHHHHHHHHHHcCCCCCCcccceEEEecC-----
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGT---------SNEMYEQHMESVGGLRHPNLVPLRAYFQAK----- 454 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 454 (664)
.+.||+|+||.||+|...++..||||++........ ..+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 468999999999999988899999999864332111 137789999999999999999999998542
Q ss_pred CceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 455 EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 455 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
...++||||++ |+|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred ceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEcCCCCEEEEecCc
Confidence 35799999998 689888863 335699999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-----
Q 006031 535 TALTADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD----- 608 (664)
Q Consensus 535 a~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----- 608 (664)
++...... .....++..|+|||.+.+...++.++|||||||++|||++|+.||..... ...+...+.......
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~ 259 (362)
T 3pg1_A 181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-YNQLNKIVEVVGTPKIEDVV 259 (362)
T ss_dssp ---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCChHHhh
Confidence 97544332 23356889999999987557789999999999999999999999976421 111111111111000
Q ss_pred ------------------C------chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 609 ------------------G------AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 609 ------------------~------~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
. ........+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 011123458899999999999999999999863
No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-38 Score=334.54 Aligned_cols=245 Identities=22% Similarity=0.309 Sum_probs=191.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCcccc------CCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLA------GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|... +++.||||.+...... ......+.+|++++++++||||+++++++...+ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 468999999999999964 5889999998754321 112345889999999999999999999987654 89999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC---eEEeeccccccc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTALT 538 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~ 538 (664)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 94 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 94 ELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp ECCTTEETHHHHS-----TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 9999999999995 345689999999999999999999999 9999999999999987655 999999999876
Q ss_pred cCCCC-CCCCCCCcccCccccc--cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhH
Q 006031 539 ADSLQ-DDDPDNLLYKAPETRN--ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDE 613 (664)
Q Consensus 539 ~~~~~-~~~~~~~~y~aPE~~~--~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 613 (664)
..... ....+++.|+|||.+. ....++.++|||||||++|||++|+.||...... ..+...+........ ....
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 246 (322)
T 2ycf_A 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITSGKYNFIPEVWAE 246 (322)
T ss_dssp CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHHHHTCCCCCHHHHTT
T ss_pred ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHHHhCccccCchhhhh
Confidence 43311 1234789999999863 2456789999999999999999999999754322 233333332222111 1122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 614 RLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 614 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 247 VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 3456899999999999999999999984
No 214
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2e-38 Score=326.62 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=200.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|+||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 468999999999999975 6889999999766554556788999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC---CCeEEeeccccccccCCCC-
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD---FEACLADYCLTALTADSLQ- 543 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla~~~~~~~~- 543 (664)
+|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||++........
T Consensus 107 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~ 180 (287)
T 2wei_A 107 ELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180 (287)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence 99998853 24689999999999999999999999 99999999999999754 4699999999986644322
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC--chhHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG--AEDERLGMLLEV 621 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l 621 (664)
....++..|+|||.+. +.++.++||||||+++|||++|+.||... ...++...+........ .....+..+.++
T Consensus 181 ~~~~~~~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 256 (287)
T 2wei_A 181 KDRIGTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (287)
T ss_dssp SCHHHHHTTCCHHHHT--TCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCSGGGTTSCHHHHHH
T ss_pred ccccCcccccChHHhc--CCCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCchhhhhcCHHHHHH
Confidence 2234678899999885 35899999999999999999999999753 23333333332222111 122345568999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 006031 622 AIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 622 ~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+||+.+|++|||+.|+++
T Consensus 257 i~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 257 IRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcccChhhCcCHHHHhc
Confidence 99999999999999999987
No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=332.32 Aligned_cols=244 Identities=23% Similarity=0.363 Sum_probs=190.8
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEec------CCceEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQA------KEERLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~~~lV 460 (664)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. .+..++|
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv 105 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 105 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEE
Confidence 46899999999999996 468899999986433 3457788999999998 89999999999976 4578999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 540 (664)
|||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 106 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 106 MEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp EECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred EEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 9999999999999642 235689999999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CCCCCCCCcccCcccccc----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHH
Q 006031 541 SL--QDDDPDNLLYKAPETRNA----SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDER 614 (664)
Q Consensus 541 ~~--~~~~~~~~~y~aPE~~~~----~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (664)
.. .....++..|+|||.+.. ...++.++|||||||++|||+||+.||.... .......+.............
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 2x7f_A 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPAPRLKSKKW 259 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSCSCS
T ss_pred CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCccccCCcccc
Confidence 32 223468999999998752 3567899999999999999999999996532 222222222222221112233
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 615 LGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 615 ~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+..+.+++.+||+.+|++|||+.|+++
T Consensus 260 ~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 260 SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 456899999999999999999999987
No 216
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-38 Score=363.85 Aligned_cols=242 Identities=19% Similarity=0.245 Sum_probs=199.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
.++||+|+||.||+|... +++.||||+++.... .....+.+..|.+++..+ +||||+.+++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 468999999999999965 578899999975422 223456778889999887 79999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC--CCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD--SLQ 543 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~ 543 (664)
+|+|.++++. ...+++..+..|+.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++.... ...
T Consensus 426 gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~ 499 (674)
T 3pfq_A 426 GGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 499 (674)
T ss_dssp SCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCB
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccCCccc
Confidence 9999999963 24699999999999999999999999 999999999999999999999999999986432 223
Q ss_pred CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHH
Q 006031 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAI 623 (664)
Q Consensus 544 ~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 623 (664)
....||+.|+|||++. ...++.++|||||||++|||++|+.||... ...++.+.+.... ...+......+.+++.
T Consensus 500 ~~~~GT~~Y~APE~l~-~~~~~~~~DvwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~~li~ 574 (674)
T 3pfq_A 500 KTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHN--VAYPKSMSKEAVAICK 574 (674)
T ss_dssp CCCCSCSSSCCHHHHT-CCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHSSC--CCCCTTSCHHHHHHHH
T ss_pred ccccCCCcccCHhhhc-CCCCCccceEechHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCC--CCCCccCCHHHHHHHH
Confidence 4467999999999987 677899999999999999999999999763 2333333332221 2233344566899999
Q ss_pred HcccCCCCCCCCH-----HHHHH
Q 006031 624 ACNSASPEQRPTM-----WQVLK 641 (664)
Q Consensus 624 ~Cl~~~P~~RPt~-----~ev~~ 641 (664)
+||+.||++||++ .||.+
T Consensus 575 ~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 575 GLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHccCCHHHCCCCCCCcHHHHhc
Confidence 9999999999987 56653
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.2e-38 Score=328.00 Aligned_cols=241 Identities=20% Similarity=0.356 Sum_probs=188.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec-------------C
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA-------------K 454 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-------------~ 454 (664)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+ .
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccH---HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 46899999999999996 478899999985432 245678999999999999999999998865 3
Q ss_pred CceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccc
Q 006031 455 EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL 534 (664)
Q Consensus 455 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 534 (664)
+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred CceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 467999999999999999963 234678899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCC----------------CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHH
Q 006031 535 TALTADSL----------------QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMM 598 (664)
Q Consensus 535 a~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~ 598 (664)
+....... .....++..|+|||.+.+...++.++|||||||++|||++ ||.... ...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~~~~ 238 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERVNIL 238 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHHHHH
Confidence 97654221 1234578899999998755578999999999999999998 443211 111222
Q ss_pred HHHHhhccC--CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 599 NWVRSARED--DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 599 ~~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..+...... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 222221111 1123334456889999999999999999999986
No 218
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.9e-38 Score=336.91 Aligned_cols=243 Identities=18% Similarity=0.230 Sum_probs=191.5
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCce------EEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEER------LLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~------~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||+|++..........+.+.+|+.++++++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 46799999999999985 4689999999976443323357788999999999999999999999877654 9999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+. ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 127 e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 197 (371)
T 4exu_A 127 PFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197 (371)
T ss_dssp ECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred cccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence 9997 68988873 2489999999999999999999999 9999999999999999999999999999865443
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhc----------------
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAR---------------- 605 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~---------------- 605 (664)
. ....+|+.|+|||.+.+...++.++|||||||++|||+||+.||..... ...+........
T Consensus 198 ~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 198 M-TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred c-CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 2 3456899999999987557789999999999999999999999976421 111111111111
Q ss_pred -------cCCC-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 606 -------EDDG-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 606 -------~~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.... ........+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 011224568999999999999999999999864
No 219
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-38 Score=362.56 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=202.2
Q ss_pred HhccccccCceeEEEEEEcC----CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEec
Q 006031 388 SAELLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 463 (664)
..+.||+|+||.||+|.... +..||+|.++.... ....+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~ 471 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL 471 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEc
Confidence 35789999999999998643 56799999865322 123467899999999999999999999985 4678999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 543 (664)
+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 472 ~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 472 CTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp CTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred CCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999963 234689999999999999999999999 999999999999999999999999999987654322
Q ss_pred ---CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHH
Q 006031 544 ---DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL 619 (664)
Q Consensus 544 ---~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 619 (664)
....+++.|+|||.+. ...++.++|||||||++|||++ |+.||... ...++...+...... ..+...+..+.
T Consensus 547 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~ 622 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERL-PMPPNCPPTLY 622 (656)
T ss_dssp -------CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCC-CCCTTCCHHHH
T ss_pred eeccCCCCCcceeCHHHhc-CCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC-CCCccccHHHH
Confidence 1234678899999986 5678999999999999999997 99998753 233444433332221 12233455689
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhcc
Q 006031 620 EVAIACNSASPEQRPTMWQVLKMLQEIKGA 649 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 649 (664)
+++.+||+.+|++|||+.|+++.|+++.+.
T Consensus 623 ~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 623 SLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999998643
No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-39 Score=347.64 Aligned_cols=245 Identities=12% Similarity=0.045 Sum_probs=176.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccc-cCCcHHHHHHH---HHHHcCCCCCCcccce-------EEEecC--
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL-AGTSNEMYEQH---MESVGGLRHPNLVPLR-------AYFQAK-- 454 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~~e---~~~l~~l~H~niv~l~-------g~~~~~-- 454 (664)
.+.||+|+||+||+|... +++.||+|++..... .....+.+.+| ++.++. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 578999999999999964 789999999976543 11234567777 455666 799988754 444332
Q ss_pred ---------------CceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCcccCC
Q 006031 455 ---------------EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC------LKIAEDVAQGLSYIHQAWRLVHGN 513 (664)
Q Consensus 455 ---------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~ivHrD 513 (664)
...++||||++ |+|.++++.. ...+.+..+ ..|+.||+.||+|||+. +|+|||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHrD 219 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL----DFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGH 219 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH----HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEETT
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh----ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccCc
Confidence 23799999999 8999999642 234566666 78889999999999999 999999
Q ss_pred CCCCCeEeCCCCCeEEeeccccccccCCCCCCCCCCCcccCcccccc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 006031 514 LKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592 (664)
Q Consensus 514 lk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~ 592 (664)
|||+|||++.++.+||+|||+++....... ...+++.|+|||.+.. ...++.++|||||||++|||+||+.||.....
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEE-GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCcc-CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999987654331 2446699999999862 15689999999999999999999999976532
Q ss_pred ChhhHHHH---HHhhccCC--CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 593 VPNEMMNW---VRSAREDD--GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 593 ~~~~~~~~---~~~~~~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
........ ........ ......+..+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11110000 00000000 111233456899999999999999999999974
No 221
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.5e-38 Score=329.04 Aligned_cols=245 Identities=21% Similarity=0.305 Sum_probs=198.9
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-------CcHHHHHHHHHHHcCCC-CCCcccceEEEecCCceEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-------TSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-------~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~l 459 (664)
.+.||+|+||.||+|... +++.||+|.+....... ...+.+.+|++++++++ ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 467999999999999975 68999999986543111 12356789999999996 9999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecccccccc
Q 006031 460 IYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTA 539 (664)
Q Consensus 460 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 539 (664)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 102 VFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp EEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 9999999999999963 34689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC-CCCCCCCCcccCccccc-----cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--Cch
Q 006031 540 DSL-QDDDPDNLLYKAPETRN-----ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAE 611 (664)
Q Consensus 540 ~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~ 611 (664)
... .....++..|+|||.+. ....++.++||||||+++|||++|+.||... ........+....... ...
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (298)
T 1phk_A 176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGSPEW 253 (298)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTTG
T ss_pred CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccCcccc
Confidence 432 23456899999999874 2345788999999999999999999999753 2223333322222111 112
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 612 DERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 612 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
...+..+.+++.+||+.+|++|||+.|+++
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 344566899999999999999999999975
No 222
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-38 Score=336.75 Aligned_cols=243 Identities=20% Similarity=0.308 Sum_probs=193.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC-----CceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK-----EERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e 462 (664)
.+.||+|+||.||+|... ++..||+|++..... ....+.+.+|++++.+++||||+++++++... ...++|+|
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEc
Confidence 468999999999999854 688999999864322 12346788999999999999999999998654 36899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+. |+|.+++.. ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 111 ~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 111 LME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred ccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 997 599999953 3589999999999999999999999 99999999999999999999999999998664332
Q ss_pred -----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccC----------
Q 006031 543 -----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED---------- 607 (664)
Q Consensus 543 -----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~---------- 607 (664)
.....+|+.|+|||.+.....++.++|||||||++|||++|+.||...... ..+..........
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhhh
Confidence 123468999999998765666899999999999999999999999764321 1121111111110
Q ss_pred -------------CCc-----hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 608 -------------DGA-----EDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 608 -------------~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
... .......+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0112356889999999999999999999986
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.6e-38 Score=338.95 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=192.6
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc------eEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE------RLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lV~e 462 (664)
.++||+|+||+||+|....+..||+|++..... ...+|+++++.++||||+++++++...+. .++|||
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 468999999999999988777799998854322 22368999999999999999999865443 789999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC-CCCCeEEeeccccccccCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTADS 541 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~ 541 (664)
|++++.+....+.. .....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 119 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 119 YVPETVYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp CCSEEHHHHHHHHH--HTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccCccHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 99875444333211 1235689999999999999999999999 999999999999999 7999999999999875433
Q ss_pred C-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC------------
Q 006031 542 L-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD------------ 608 (664)
Q Consensus 542 ~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~------------ 608 (664)
. .....+|+.|+|||.+.+...++.++|||||||++|||++|+.||..... ...+...+.....+.
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2 23456899999999987556789999999999999999999999976421 122222222111100
Q ss_pred ----------C----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhcc
Q 006031 609 ----------G----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKM--LQEIKGA 649 (664)
Q Consensus 609 ----------~----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~~~ 649 (664)
. ........+.+++.+||+.||++|||+.|+++. +++++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 0 011133568999999999999999999999874 5555543
No 224
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-38 Score=339.98 Aligned_cols=250 Identities=16% Similarity=0.266 Sum_probs=192.4
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC-------------
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK------------- 454 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------------- 454 (664)
.+.||+|+||+||+|.. .+++.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~ 85 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDD 85 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccc
Confidence 46899999999999985 5789999999864322 234789999999999999999998543
Q ss_pred -------------------------CceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCc
Q 006031 455 -------------------------EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509 (664)
Q Consensus 455 -------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~i 509 (664)
...++||||++ |+|.+.+.... .....+++..+..++.|+++||+|||+. +|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~-gi 162 (383)
T 3eb0_A 86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVGFIHSL-GI 162 (383)
T ss_dssp ------------------------CCEEEEEECCCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTT-TE
T ss_pred cccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHC-cC
Confidence 33789999998 58877775211 1235699999999999999999999998 99
Q ss_pred ccCCCCCCCeEeC-CCCCeEEeeccccccccCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCC
Q 006031 510 VHGNLKSSNVLLG-PDFEACLADYCLTALTADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPS 587 (664)
Q Consensus 510 vHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~ 587 (664)
+||||||+|||++ .++.+||+|||+++...... .....++..|+|||.+.+...++.++|||||||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999997 68899999999998654432 334568999999999875566899999999999999999999999
Q ss_pred CCCCCChhhHHHHHHhhccCC----------------------C----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 588 QHSFLVPNEMMNWVRSAREDD----------------------G----AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~----------------------~----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.... ....+...+.....+. . .+...+..+.+++.+||+.+|++|||+.|+++
T Consensus 243 ~~~~-~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 243 SGET-SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CCSS-HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCC-hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 7632 1122222222111110 0 11123455899999999999999999999984
Q ss_pred --HHHhhhc
Q 006031 642 --MLQEIKG 648 (664)
Q Consensus 642 --~L~~i~~ 648 (664)
.+++++.
T Consensus 322 hp~f~~~~~ 330 (383)
T 3eb0_A 322 HPFFDHLRN 330 (383)
T ss_dssp SGGGHHHHH
T ss_pred CHHHHHHHh
Confidence 3455544
No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=326.02 Aligned_cols=245 Identities=19% Similarity=0.252 Sum_probs=193.7
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCcccc--CCcHHHHHHHHHHHcCCCCCCcccceEEEe--cCCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLRAYFQ--AKEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~--~~~~~~lV~e~ 463 (664)
.+.||+|+||.||+|.. .++..||+|.+...... ....+.+.+|++++++++||||+++++++. +.+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 46799999999999996 46889999999754321 234678999999999999999999999984 45578999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL- 542 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 542 (664)
++++ |.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 90 CVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp CSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred ccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 9876 77777542 245689999999999999999999999 99999999999999999999999999998654321
Q ss_pred ---CCCCCCCCcccCccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHH
Q 006031 543 ---QDDDPDNLLYKAPETRNASH-QATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618 (664)
Q Consensus 543 ---~~~~~~~~~y~aPE~~~~~~-~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 618 (664)
.....++..|+|||.+.+.. ..+.++||||||+++|||++|+.||... ...++...+..... ..+......+
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~--~~~~~~~~~l 240 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--NIYKLFENIGKGSY--AIPGDCGPPL 240 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCC--CCCSSSCHHH
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHhcCCC--CCCCccCHHH
Confidence 12346899999999886322 2477999999999999999999999753 22233332222211 1222334568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 006031 619 LEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 619 ~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 241 SDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 899999999999999999999864
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.1e-38 Score=328.75 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=192.0
Q ss_pred hccccccCceeEEEEEE--cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC---CCCCcccceEEEe-----cCCceE
Q 006031 389 AELLGKGSLGTTYKAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL---RHPNLVPLRAYFQ-----AKEERL 458 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~-----~~~~~~ 458 (664)
.+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.+ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46899999999999997 4688999999875443222333456666666555 8999999999987 456789
Q ss_pred EEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccc
Q 006031 459 LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538 (664)
Q Consensus 459 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 538 (664)
+||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 96 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 170 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170 (326)
T ss_dssp EEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred EEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence 9999998 6999999642 234589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCC-CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC---------
Q 006031 539 ADS-LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--------- 608 (664)
Q Consensus 539 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--------- 608 (664)
... ......++..|+|||.+. ...++.++|||||||++|||+||+.||..... ...+...........
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 171 SFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CGGGGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cCCCCccccccccceeCHHHHh-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHcCCCCcccCccccc
Confidence 433 223456899999999987 56789999999999999999999999976421 112222221111000
Q ss_pred ---------------CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 609 ---------------GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 609 ---------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
......+..+.+++.+||+.+|++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001223456889999999999999999999985
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.1e-38 Score=343.10 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=191.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC----C--ceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK----E--ERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~--~~~lV~ 461 (664)
.+.||+|+||+||+|... +++.||||++.... ..+.+|++++++++|||||+++++|... + ..++||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 468999999999999975 58999999986432 2234789999999999999999998542 1 367999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC-CCeEEeeccccccccC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD-FEACLADYCLTALTAD 540 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~-~~~ki~DfGla~~~~~ 540 (664)
||+++ ++.+.+.... .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 133 e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp ECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred hcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 99986 6666553211 1235699999999999999999999998 99999999999999965 5689999999987543
Q ss_pred CC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC-----------
Q 006031 541 SL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD----------- 608 (664)
Q Consensus 541 ~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----------- 608 (664)
.. .....+|+.|+|||++.+...++.++|||||||++|||++|+.||..... ...+...+.......
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 23456899999999987555789999999999999999999999976421 122333222111000
Q ss_pred ----------C-----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhcc
Q 006031 609 ----------G-----AEDERLGMLLEVAIACNSASPEQRPTMWQVLK--MLQEIKGA 649 (664)
Q Consensus 609 ----------~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~~~ 649 (664)
. ........+.+++.+||+.||++|||+.|+++ .+++++..
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 346 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP 346 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence 0 01122456899999999999999999999985 34555443
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-37 Score=328.16 Aligned_cols=247 Identities=18% Similarity=0.269 Sum_probs=197.0
Q ss_pred hccccccCceeEEEEEE--cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCC------CcccceEEEecCCceEEE
Q 006031 389 AELLGKGSLGTTYKAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP------NLVPLRAYFQAKEERLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~------niv~l~g~~~~~~~~~lV 460 (664)
.+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|+++++.++|+ +++++++++...+..++|
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv 95 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIV 95 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEE
Confidence 46799999999999986 368899999986432 2356788898888887665 499999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-----------------
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP----------------- 523 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~----------------- 523 (664)
|||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 96 ~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 96 FELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999 88999999642 234689999999999999999999999 9999999999999987
Q ss_pred --CCCeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH
Q 006031 524 --DFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV 601 (664)
Q Consensus 524 --~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~ 601 (664)
++.+||+|||+++...... ....+|+.|+|||.+. ...++.++|||||||++|||++|+.||.... ..+....+
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~ 246 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD--SKEHLAMM 246 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCC-CSSCSCGGGCCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC--HHHHHHHH
T ss_pred ccCCCceEeeCcccccCcccc-ccccCCccccChHHhh-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHH
Confidence 6789999999998754432 3456899999999987 5678999999999999999999999997532 22222111
Q ss_pred HhhccC------------------------------------------CCchhHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 006031 602 RSARED------------------------------------------DGAEDERLGMLLEVAIACNSASPEQRPTMWQV 639 (664)
Q Consensus 602 ~~~~~~------------------------------------------~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev 639 (664)
...... ..........+.+++.+||+.||++|||+.|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 111110 01123445678999999999999999999999
Q ss_pred HHH--HHhhh
Q 006031 640 LKM--LQEIK 647 (664)
Q Consensus 640 ~~~--L~~i~ 647 (664)
++. +++++
T Consensus 327 l~hp~f~~~~ 336 (339)
T 1z57_A 327 LKHPFFDLLK 336 (339)
T ss_dssp TTSGGGGGGG
T ss_pred hcCHHHHHHh
Confidence 854 44444
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.4e-38 Score=330.19 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=192.5
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC--CCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR--HPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||++...+++.||+|++..........+.+.+|++++.+++ |+||+++++++.+.+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765443344578899999999997 5999999999999999999999 568
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC---
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~--- 543 (664)
++|.+++.. ...+++..+..|+.|++.||+|||+. +|+||||||+||++++ +.+||+|||+++.......
T Consensus 112 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~ 184 (313)
T 3cek_A 112 IDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVV 184 (313)
T ss_dssp EEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC---------
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCcccccc
Confidence 899999963 34689999999999999999999999 9999999999999964 8999999999986544321
Q ss_pred -CCCCCCCcccCcccccc----------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchh
Q 006031 544 -DDDPDNLLYKAPETRNA----------SHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAED 612 (664)
Q Consensus 544 -~~~~~~~~y~aPE~~~~----------~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (664)
....+++.|+|||.+.. ...++.++||||||+++|||++|+.||.........+......... ...+.
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~ 263 (313)
T 3cek_A 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-IEFPD 263 (313)
T ss_dssp -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC-CCCCC
T ss_pred ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc-cCCcc
Confidence 23458999999998753 1467889999999999999999999997643222222222222111 11122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 613 ~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.....+.+++.+||+.+|++||++.|+++.
T Consensus 264 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 264 IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 223558899999999999999999999863
No 230
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=329.49 Aligned_cols=248 Identities=18% Similarity=0.243 Sum_probs=178.1
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+.||+|+||.||+|... +++.||||++..........+.+.++..+++.++||||+++++++.+.+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 468999999999999975 6889999999755432222344555666788899999999999999999999999999 45
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC-CCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDDD 546 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~~ 546 (664)
.+..+... ....+++..+..++.|++.||+|||+..+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 109 ~~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (318)
T 2dyl_A 109 CAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184 (318)
T ss_dssp EHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred cHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccccc
Confidence 55555532 235689999999999999999999983389999999999999999999999999997654432 2234
Q ss_pred CCCCcccCccccc----cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHHH
Q 006031 547 PDNLLYKAPETRN----ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVA 622 (664)
Q Consensus 547 ~~~~~y~aPE~~~----~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 622 (664)
.+++.|+|||.+. ....++.++||||||+++|||++|+.||.........+.................+..+.+++
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 264 (318)
T 2dyl_A 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFV 264 (318)
T ss_dssp --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHH
T ss_pred CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHH
Confidence 6889999999984 245678899999999999999999999975322222222222222211111122345689999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 006031 623 IACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+||+.||++||++.|+++
T Consensus 265 ~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 265 KDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHTCSCTTTSCCHHHHTT
T ss_pred HHHccCChhHCcCHHHHhh
Confidence 9999999999999999986
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=325.97 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=184.9
Q ss_pred hccccccCceeEEEEEEcC-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEe--------------c
Q 006031 389 AELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQ--------------A 453 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~--------------~ 453 (664)
.+.||+|+||.||+|.... ++.||+|++..... ...+.+.+|++++++++||||+++++++. +
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 93 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh--HHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccc
Confidence 4679999999999999764 89999999865432 34567899999999999999999999874 3
Q ss_pred CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC-CCCCeEEeec
Q 006031 454 KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADY 532 (664)
Q Consensus 454 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~-~~~~~ki~Df 532 (664)
.+..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 94 ~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 94 LNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 467899999997 699999942 4589999999999999999999999 999999999999997 5679999999
Q ss_pred cccccccCCC-----CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhcc-
Q 006031 533 CLTALTADSL-----QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE- 606 (664)
Q Consensus 533 Gla~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~- 606 (664)
|+++...... .....++..|+|||.+.....++.++|||||||++|||+||+.||..... ...+.........
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-LEQMQLILESIPVV 244 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHSCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCC
Confidence 9998754321 11234688899999886557789999999999999999999999976421 1111111111100
Q ss_pred ----------------------CCC----chhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 607 ----------------------DDG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 607 ----------------------~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 00123456899999999999999999999986
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=9.2e-39 Score=335.48 Aligned_cols=251 Identities=20% Similarity=0.273 Sum_probs=174.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHH-HHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHME-SVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||||++...... .....+..|+. +++.++||||+++++++.+.+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH-HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc-hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 467999999999999974 6899999999754321 22344555555 78888999999999999999999999999985
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCC-CC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DD 545 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~-~~ 545 (664)
+|.+++..........+++..+..++.|++.||.|||+..+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR 184 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc
Confidence 8887774211122456899999999999999999999955899999999999999999999999999987654332 23
Q ss_pred CCCCCcccCccccc---cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--CchhHHHHHHHH
Q 006031 546 DPDNLLYKAPETRN---ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD--GAEDERLGMLLE 620 (664)
Q Consensus 546 ~~~~~~y~aPE~~~---~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 620 (664)
..++..|+|||.+. ....++.++||||||+++|||++|+.||.........+........... .........+.+
T Consensus 185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 264 (327)
T 3aln_A 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN 264 (327)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHH
T ss_pred CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHH
Confidence 46889999999983 2456889999999999999999999999753211111111111000000 011223456899
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 006031 621 VAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 621 l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
++.+||+.+|++|||+.|+++
T Consensus 265 li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 265 FVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp HHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhhCChhhCcCHHHHHh
Confidence 999999999999999999976
No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.1e-38 Score=332.99 Aligned_cols=242 Identities=20% Similarity=0.254 Sum_probs=168.2
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec----CCceEEEEec
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA----KEERLLIYDY 463 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lV~e~ 463 (664)
.++||+|+||+||+|... +++.||+|++... .....+....++.++||||+++++++.. ....++||||
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 107 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC 107 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence 357999999999999976 6899999998542 2222333344666799999999999876 4458999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeeccccccccC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTALTAD 540 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~ 540 (664)
+++|+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 108 ~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 108 MEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred cCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 9999999999742 234699999999999999999999999 9999999999999976 45599999999987665
Q ss_pred CCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChh--hHHHHHHhhcc--CCCchhHHHH
Q 006031 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPN--EMMNWVRSARE--DDGAEDERLG 616 (664)
Q Consensus 541 ~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~ 616 (664)
.......+++.|+|||.+. ...++.++||||||+++|||++|+.||........ .....+..... ........+.
T Consensus 184 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCH
T ss_pred cccccCCCCcCccChhhhC-CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCH
Confidence 5545567899999999986 56788999999999999999999999975422111 11111111111 1111123455
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 617 MLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 617 ~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 263 DAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 6899999999999999999999997
No 234
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.4e-38 Score=337.16 Aligned_cols=244 Identities=18% Similarity=0.245 Sum_probs=192.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC--------CCCcccceEEEe----cCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR--------HPNLVPLRAYFQ----AKE 455 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~----~~~ 455 (664)
.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++. ...
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~ 118 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE---HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT 118 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC---cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCc
Confidence 46899999999999985 568899999996432 23567889999998885 788999999987 556
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCC----------
Q 006031 456 ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF---------- 525 (664)
Q Consensus 456 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~---------- 525 (664)
..++||||+ +++|.+++.. .....+++..+..|+.||+.||+|||++.+|+||||||+|||++.++
T Consensus 119 ~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 119 HICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred eEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 789999999 5677666643 22356999999999999999999999855899999999999999775
Q ss_pred ---------------------------------------CeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCc
Q 006031 526 ---------------------------------------EACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATS 566 (664)
Q Consensus 526 ---------------------------------------~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 566 (664)
.+||+|||+++...... ....+|..|+|||.+. ...++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-~~~~gt~~y~aPE~~~-~~~~~~ 272 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-TEDIQTRQYRSLEVLI-GSGYNT 272 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-CSCCSCGGGCCHHHHH-TSCCCT
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-ccCCCCCcccCChhhc-CCCCCc
Confidence 89999999998765442 3457899999999987 567899
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCCh----hhHHHHHHhhccC-----------------------------------
Q 006031 567 KSDVYSFGVLLLELLTGKPPSQHSFLVP----NEMMNWVRSARED----------------------------------- 607 (664)
Q Consensus 567 ksDVwSfGvvl~elltG~~P~~~~~~~~----~~~~~~~~~~~~~----------------------------------- 607 (664)
++|||||||++|||+||+.||....... .+....+......
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 9999999999999999999997543221 1111111110000
Q ss_pred -----CCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 608 -----DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 608 -----~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
.....+....+.+++.+||+.||++|||+.|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0113455677899999999999999999999985
No 235
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.3e-39 Score=335.39 Aligned_cols=237 Identities=20% Similarity=0.337 Sum_probs=195.0
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC----CcHHHHHHHHHHHcCCC--CCCcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGLR--HPNLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|++++++++ |+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 46899999999999985 568999999997554321 12345677888998886 599999999999999999999
Q ss_pred ecCCC-CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC-CCCCeEEeecccccccc
Q 006031 462 DYQPN-GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTA 539 (664)
Q Consensus 462 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla~~~~ 539 (664)
||+.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++...
T Consensus 128 e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 128 ERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp ECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 99976 899999953 34689999999999999999999999 999999999999999 78999999999998876
Q ss_pred CCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHH
Q 006031 540 DSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL 619 (664)
Q Consensus 540 ~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 619 (664)
........+++.|+|||.+......+.++||||||+++|||+||+.||... ... ..... ......+..+.
T Consensus 202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~~~---~~~~~---~~~~~~~~~~~ 271 (320)
T 3a99_A 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEI---IRGQV---FFRQRVSSECQ 271 (320)
T ss_dssp SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH---HHCCC---CCSSCCCHHHH
T ss_pred cccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----hhh---hcccc---cccccCCHHHH
Confidence 665555678999999998874444578899999999999999999998642 111 11111 11122334588
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 006031 620 EVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 620 ~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+++.+||+.+|++|||+.|+++
T Consensus 272 ~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 272 HLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCChhhCcCHHHHhc
Confidence 9999999999999999999986
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.1e-38 Score=331.62 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=190.6
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc------eEEEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE------RLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lV~ 461 (664)
.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++++++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 46799999999999996 468999999997544322335678899999999999999999999987654 49999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+. |+|.+++. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 179 (353)
T 3coi_A 109 PFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179 (353)
T ss_dssp ECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred cccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence 9997 58887773 2489999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhh-----------------
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA----------------- 604 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~----------------- 604 (664)
. ....+++.|+|||.+.+...++.++|||||||++|||++|+.||..... ...+.......
T Consensus 180 ~-~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 180 M-TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-HHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred c-cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 2 3356899999999987556789999999999999999999999976421 11111111110
Q ss_pred ------ccCC-----CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006031 605 ------REDD-----GAEDERLGMLLEVAIACNSASPEQRPTMWQVLKM 642 (664)
Q Consensus 605 ------~~~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 642 (664)
.... .........+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 0112334568999999999999999999999863
No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-37 Score=331.40 Aligned_cols=254 Identities=20% Similarity=0.251 Sum_probs=184.3
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc-------eEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE-------RLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-------~~lV 460 (664)
.+.||+|+||+||+|... ++..||||++..... ....+.++++.++.++||||+++++++...+. .++|
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv 104 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEE
Confidence 367999999999999974 688999999854332 23456677888888999999999999976443 7899
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCcccCCCCCCCeEeCC-CCCeEEeecccccc
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH--QAWRLVHGNLKSSNVLLGP-DFEACLADYCLTAL 537 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~ivHrDlk~~NILl~~-~~~~ki~DfGla~~ 537 (664)
|||+++ +|...+.... .....+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 105 ~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 105 MEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp EECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred eecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 999986 5544432111 23456899999999999999999999 77 9999999999999997 89999999999987
Q ss_pred ccCCCC-CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCC--------
Q 006031 538 TADSLQ-DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDD-------- 608 (664)
Q Consensus 538 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-------- 608 (664)
...... ....+|+.|+|||.+.+...++.++|||||||++|||+||+.||..... ...+....+......
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCPSREVLRKLN 260 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCCCHHHHHhcc
Confidence 654432 3456899999999987556689999999999999999999999976421 122222222111110
Q ss_pred ---------------------CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhcc
Q 006031 609 ---------------------GAEDERLGMLLEVAIACNSASPEQRPTMWQVLKM--LQEIKGA 649 (664)
Q Consensus 609 ---------------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~~~ 649 (664)
.........+.+++.+||+.||++|||+.|+++. ++++...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp TTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred cchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 0011134678999999999999999999999874 5555443
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=331.62 Aligned_cols=237 Identities=23% Similarity=0.358 Sum_probs=188.8
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccC----CcHHHHHHHHHHHcCC----CCCCcccceEEEecCCceEE
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAG----TSNEMYEQHMESVGGL----RHPNLVPLRAYFQAKEERLL 459 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l----~H~niv~l~g~~~~~~~~~l 459 (664)
.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 46899999999999985 568899999997543321 1223456788888777 89999999999999999999
Q ss_pred EEec-CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC-CCCCeEEeecccccc
Q 006031 460 IYDY-QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTAL 537 (664)
Q Consensus 460 V~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla~~ 537 (664)
|+|| +.+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||++..
T Consensus 116 v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGAL 189 (312)
T ss_dssp EEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred EEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence 9999 789999999963 34689999999999999999999999 999999999999999 889999999999988
Q ss_pred ccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHH
Q 006031 538 TADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617 (664)
Q Consensus 538 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (664)
..........++..|+|||.+......+.++||||||+++|||++|+.||... .++. ... ..........
T Consensus 190 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~~~---~~~---~~~~~~~~~~ 259 (312)
T 2iwi_A 190 LHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QEIL---EAE---LHFPAHVSPD 259 (312)
T ss_dssp CCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHHH---HTC---CCCCTTSCHH
T ss_pred cccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HHHh---hhc---cCCcccCCHH
Confidence 76665556678999999998874444456899999999999999999998642 1111 111 1112233455
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 006031 618 LLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 618 l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+.+++.+||+.+|++|||+.|+++
T Consensus 260 ~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 260 CCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 889999999999999999999986
No 239
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9e-38 Score=331.38 Aligned_cols=250 Identities=19% Similarity=0.229 Sum_probs=194.8
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecC-----CceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAK-----EERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e 462 (664)
.+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++... ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence 468999999999999965 689999999964321 12345688999999999999999999988654 67899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 95 LMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 997 699999853 3589999999999999999999999 99999999999999999999999999998654321
Q ss_pred C------------CCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHH--------
Q 006031 543 Q------------DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR-------- 602 (664)
Q Consensus 543 ~------------~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~-------- 602 (664)
. ....||+.|+|||.+.....++.++|||||||++|||++|+.||..... ...+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-RHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCST
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCchh
Confidence 1 1235789999999876557789999999999999999999999976421 111111111
Q ss_pred ----------------hhccCCCc-----hhHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhc
Q 006031 603 ----------------SAREDDGA-----EDERLGMLLEVAIACNSASPEQRPTMWQVLK--MLQEIKG 648 (664)
Q Consensus 603 ----------------~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~~ 648 (664)
........ ....+..+.+++.+||+.||++|||+.|+++ .++.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence 10000000 0123456889999999999999999999987 3454443
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.3e-38 Score=341.68 Aligned_cols=243 Identities=19% Similarity=0.267 Sum_probs=185.0
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++||||+. |
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 4679999999998777778999999998542 245678899999876 89999999999999999999999995 6
Q ss_pred CHHHHhccCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCC-------------CCeEEeec
Q 006031 468 SLFSLIHGSKSTRA--KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD-------------FEACLADY 532 (664)
Q Consensus 468 sL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~-------------~~~ki~Df 532 (664)
+|.+++........ ....+..+..|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99999975321111 1123445678999999999999999 99999999999999654 58999999
Q ss_pred cccccccCCCC------CCCCCCCcccCcccccc------CCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHH
Q 006031 533 CLTALTADSLQ------DDDPDNLLYKAPETRNA------SHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMN 599 (664)
Q Consensus 533 Gla~~~~~~~~------~~~~~~~~y~aPE~~~~------~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~ 599 (664)
|+++....... ....||+.|+|||++.+ ...++.++|||||||++|||+| |+.||....... ..
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~ 249 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SN 249 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HH
Confidence 99987654321 23468999999998863 2568999999999999999999 999997543221 22
Q ss_pred HHHhhccCC----CchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 600 WVRSAREDD----GAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 600 ~~~~~~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
......... .........+.+++.+||+.||++|||+.||++
T Consensus 250 i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 250 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 222221111 123345677999999999999999999999985
No 241
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6e-37 Score=328.98 Aligned_cols=193 Identities=20% Similarity=0.325 Sum_probs=162.4
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CC-----CcccceEEEecCCceEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HP-----NLVPLRAYFQAKEERLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~~~lV~ 461 (664)
.+.||+|+||+||+|... +++.||||+++... .....+..|+++++.++ |+ +|+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 135 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 135 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEE
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEE
Confidence 468999999999999865 68899999997432 23456777888887774 54 4999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCCCeEeC--CCCCeEEeeccccccc
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ-AWRLVHGNLKSSNVLLG--PDFEACLADYCLTALT 538 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~ivHrDlk~~NILl~--~~~~~ki~DfGla~~~ 538 (664)
||++ |+|.+++... ....+++..+..|+.|++.||+|||. ..+|+||||||+|||++ .++.+||+|||+++..
T Consensus 136 e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 136 EMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp ECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred ecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 9996 5999999742 23458999999999999999999995 23899999999999994 5788999999999876
Q ss_pred cCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 006031 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590 (664)
Q Consensus 539 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~ 590 (664)
.... ....+|+.|+|||++. ...++.++|||||||++|||+||+.||...
T Consensus 212 ~~~~-~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 212 GQRI-YQYIQSRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCCC-CSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc-ccccCCccccChHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5432 3457899999999987 567899999999999999999999999864
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=335.87 Aligned_cols=240 Identities=19% Similarity=0.268 Sum_probs=182.4
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEEEecCCCC
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+.+..++||||+. |
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 468999999997666567788999999865332 2356789999988 89999999999999999999999996 5
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC-----CCCeEEeeccccccccCCC
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP-----DFEACLADYCLTALTADSL 542 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~-----~~~~ki~DfGla~~~~~~~ 542 (664)
+|.+++... ...+.+..+..|+.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++......
T Consensus 103 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 103 TLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp EHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred CHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 999999743 23345556789999999999999999 9999999999999943 3468899999998765331
Q ss_pred -----CCCCCCCCcccCcccccc--CCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChhhHHHHHHhhccC-CCchhH
Q 006031 543 -----QDDDPDNLLYKAPETRNA--SHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED-DGAEDE 613 (664)
Q Consensus 543 -----~~~~~~~~~y~aPE~~~~--~~~~~~ksDVwSfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 613 (664)
.....||+.|+|||++.. ...++.++|||||||++|||+| |+.||.... .............. ......
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~ 255 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL--QRQANILLGACSLDCLHPEKH 255 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT--THHHHHHTTCCCCTTSCTTCH
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh--HHHHHHHhccCCccccCcccc
Confidence 223568999999999863 3456789999999999999999 999986432 11111111111111 112234
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 614 RLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 614 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
....+.+++.+||+.||++|||+.||++
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 4556889999999999999999999983
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.4e-37 Score=324.54 Aligned_cols=241 Identities=17% Similarity=0.238 Sum_probs=191.5
Q ss_pred hccccccCceeEEEEEEc-C-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCC------cccceEEEecCCceEEE
Q 006031 389 AELLGKGSLGTTYKAVLD-N-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN------LVPLRAYFQAKEERLLI 460 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~~~lV 460 (664)
.+.||+|+||+||+|... + +..||+|+++... ...+.+.+|++++++++|++ ++.+++++...+..++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv 100 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIA 100 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEE
Confidence 468999999999999964 3 4789999996432 24567888999998887765 89999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEe-------------------
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL------------------- 521 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl------------------- 521 (664)
|||+ ++++.+++... ....+++..+..|+.||+.||+|||+. +|+||||||+|||+
T Consensus 101 ~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 101 FELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred Eecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999 66777777532 234689999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH
Q 006031 522 GPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV 601 (664)
Q Consensus 522 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~ 601 (664)
+.++.+||+|||+++...... ....+|+.|+|||.+. ...++.++|||||||++|||+||+.||.... ..+....+
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~ 251 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHH-TTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHE--NREHLVMM 251 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCC-CSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHH
T ss_pred cCCCcEEEeecCccccccccc-cCCcCCCcccCCeeee-cCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHH
Confidence 567899999999998754432 3456899999999987 6678999999999999999999999997532 22211111
Q ss_pred HhhccCC------------------------------------------CchhHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 006031 602 RSAREDD------------------------------------------GAEDERLGMLLEVAIACNSASPEQRPTMWQV 639 (664)
Q Consensus 602 ~~~~~~~------------------------------------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev 639 (664)
....... .........+.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 1111100 0112334578899999999999999999999
Q ss_pred HH
Q 006031 640 LK 641 (664)
Q Consensus 640 ~~ 641 (664)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 84
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.1e-37 Score=328.02 Aligned_cols=244 Identities=17% Similarity=0.242 Sum_probs=192.2
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-----------CCCcccceEEEecCC-
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-----------HPNLVPLRAYFQAKE- 455 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~~~- 455 (664)
.+.||+|+||+||+|.. .+++.||||++..... ..+.+.+|++++++++ |+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 100 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 100 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH---HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc---chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence 46899999999999996 5789999999964332 3567888999988876 899999999987654
Q ss_pred ---ceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeC------CCCC
Q 006031 456 ---ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG------PDFE 526 (664)
Q Consensus 456 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~------~~~~ 526 (664)
..++||||+ +++|.+++... ....+++..+..|+.||+.||+|||++.+|+||||||+|||++ .++.
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 101 NGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 88999999642 2345899999999999999999999955899999999999994 4458
Q ss_pred eEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC----h-hhHHHHH
Q 006031 527 ACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV----P-NEMMNWV 601 (664)
Q Consensus 527 ~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~----~-~~~~~~~ 601 (664)
+||+|||+++...... ....+|+.|+|||.+. ...++.++|||||||++|||+||+.||...... . ..+....
T Consensus 177 ~kl~Dfg~a~~~~~~~-~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 177 IKIADLGNACWYDEHY-TNSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEECCCTTCEETTBCC-CSCCSCGGGCCHHHHH-TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred EEEcccccccccCCCC-CCCCCCccccCcHHHh-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 9999999998765432 3457899999999987 567899999999999999999999999754211 1 1122221
Q ss_pred Hhhcc---------------------------------------CCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 602 RSARE---------------------------------------DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 602 ~~~~~---------------------------------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..... ....+......+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 11110 00123455677999999999999999999999987
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-36 Score=312.58 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=178.7
Q ss_pred hccccccCceeEEEEEEc-CCeEEEEEEccCccccC-CcHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEecCCC
Q 006031 389 AELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAG-TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
.+.||+|+||.||+|... +++.||+|.+....... ...+.+.+|++.+.+++||||+++++++.+.+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 367999999999999975 48999999997654321 2236789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCCC
Q 006031 467 GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546 (664)
Q Consensus 467 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 546 (664)
++|.+++.. . ....+..+|+.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 116 GSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp EEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred CCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 999999942 1 34557889999999999999999 99999999999999999999998442
Q ss_pred CCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCC----chhHHHHHHHHHH
Q 006031 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG----AEDERLGMLLEVA 622 (664)
Q Consensus 547 ~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~ 622 (664)
|++| ++.++|||||||++|||+||+.||........ +............ .....+..+.+++
T Consensus 175 -----~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 240 (286)
T 3uqc_A 175 -----TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LAPAERDTAGQPIEPADIDRDIPFQISAVA 240 (286)
T ss_dssp -----CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SEECCBCTTSCBCCHHHHCTTSCHHHHHHH
T ss_pred -----ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hHHHHHHhccCCCChhhcccCCCHHHHHHH
Confidence 3333 57899999999999999999999986432110 0000000000000 1122345689999
Q ss_pred HHcccCCCCCCCCHHHHHHHHHhhhccc
Q 006031 623 IACNSASPEQRPTMWQVLKMLQEIKGAV 650 (664)
Q Consensus 623 ~~Cl~~~P~~RPt~~ev~~~L~~i~~~~ 650 (664)
.+||+.||++| |+.|+++.|+++....
T Consensus 241 ~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 241 ARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 99999999999 9999999999987654
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-36 Score=346.38 Aligned_cols=235 Identities=20% Similarity=0.224 Sum_probs=189.5
Q ss_pred hccccccCceeEEEEEEc--CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEecCCc-----eEEEE
Q 006031 389 AELLGKGSLGTTYKAVLD--NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEE-----RLLIY 461 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-----~~lV~ 461 (664)
.+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 467999999999999975 689999999864322 1234678899999999999999999999987765 79999
Q ss_pred ecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCC
Q 006031 462 DYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541 (664)
Q Consensus 462 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 541 (664)
||+++++|.+++. ..++|..+..|+.||+.||+|||+. +|+||||||+|||++.+ .+||+|||+++.....
T Consensus 164 E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 164 EYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp ECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred EeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999998773 2689999999999999999999999 99999999999999986 9999999999876544
Q ss_pred CCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhhccCCCchhHHHHHHHHH
Q 006031 542 LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621 (664)
Q Consensus 542 ~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 621 (664)
....||+.|+|||.+.. .++.++|||||||++|||++|.+|+........ ............+.++
T Consensus 235 --~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 235 --GYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PEDDPVLKTYDSYGRL 300 (681)
T ss_dssp --SCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CTTCHHHHHCHHHHHH
T ss_pred --CccCCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCcccccccc----------cccccccccCHHHHHH
Confidence 34568999999998863 348899999999999999999998764321100 0111122234568899
Q ss_pred HHHcccCCCCCCC-CHHHHHHHHHhhh
Q 006031 622 AIACNSASPEQRP-TMWQVLKMLQEIK 647 (664)
Q Consensus 622 ~~~Cl~~~P~~RP-t~~ev~~~L~~i~ 647 (664)
+.+||+.||++|| ++.++.+.|..+.
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 9999999999999 5777777776653
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.2e-36 Score=340.43 Aligned_cols=253 Identities=23% Similarity=0.292 Sum_probs=198.5
Q ss_pred HhccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEec------CCceEEE
Q 006031 388 SAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQA------KEERLLI 460 (664)
Q Consensus 388 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~~~~lV 460 (664)
..+.||+|+||.||+|.. .++..||||++.... .....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEE
Confidence 357899999999999986 568899999986532 22345678999999999999999999998765 6678999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC---eEEeecccccc
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTAL 537 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~ 537 (664)
|||+++|+|.+++.... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 97 mEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp EECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999997432 234689999999999999999999998 9999999999999997765 89999999987
Q ss_pred ccCCC-CCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHHHhh------------
Q 006031 538 TADSL-QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA------------ 604 (664)
Q Consensus 538 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~------------ 604 (664)
..... .....++..|+|||.+. ...++.++|||||||++|||++|+.||.... ....|....
T Consensus 174 ~~~~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 174 LDQGELCTEFVGTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp TTSCCCCCCCCSCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCC
T ss_pred cccccccccccCCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhh
Confidence 65433 23456899999999987 6778999999999999999999999996531 111111000
Q ss_pred ------------ccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHhhhcc
Q 006031 605 ------------REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQ-----VLKMLQEIKGA 649 (664)
Q Consensus 605 ------------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~e-----v~~~L~~i~~~ 649 (664)
..........+..+.+++.+||+.||++|||+.| ..+.++++...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 0000123345677999999999999999999988 55666666543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.8e-36 Score=325.15 Aligned_cols=241 Identities=14% Similarity=0.079 Sum_probs=176.9
Q ss_pred hccccccCceeEEEEEE-cCCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCCC-CCcccceE---------E------
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLRH-PNLVPLRA---------Y------ 450 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H-~niv~l~g---------~------ 450 (664)
.++||+|+||+||+|.. .+|+.||||++..... .....+.+.+|+.+++.++| +|...... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 46899999999999994 5688999999873322 22335779999999999987 32221111 1
Q ss_pred ------Eec-----CCceEEEEecCCCCCHHHHhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 006031 451 ------FQA-----KEERLLIYDYQPNGSLFSLIHGSK--STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSS 517 (664)
Q Consensus 451 ------~~~-----~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~ 517 (664)
+.. ....+++|+++ +++|.+++.... ......+++..++.|+.|+++||+|||+. +|+||||||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrDiKp~ 240 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYLRPV 240 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGG
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcccc
Confidence 111 12356777765 679999884110 12345688999999999999999999999 9999999999
Q ss_pred CeEeCCCCCeEEeeccccccccCCCCCCCCCCCcccCccccc---------cCCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 006031 518 NVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRN---------ASHQATSKSDVYSFGVLLLELLTGKPPSQ 588 (664)
Q Consensus 518 NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~ksDVwSfGvvl~elltG~~P~~ 588 (664)
|||++.++.+||+|||+++...... ....| +.|+|||.+. ....++.++|||||||++|||+||+.||.
T Consensus 241 NILl~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 318 (413)
T 3dzo_A 241 DIVLDQRGGVFLTGFEHLVRDGASA-VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318 (413)
T ss_dssp GEEECTTCCEEECCGGGCEETTEEE-CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred eEEEecCCeEEEEeccceeecCCcc-ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 9999999999999999998765442 33456 9999999883 24557889999999999999999999997
Q ss_pred CCCCChhhHHHHHHhhccCCCchhHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 589 HSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
..... +... ...... ...+..+.+++.+||+.+|++||++.|+++
T Consensus 319 ~~~~~--~~~~---~~~~~~---~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 319 DDAAL--GGSE---WIFRSC---KNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp TTGGG--SCSG---GGGSSC---CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred Ccchh--hhHH---HHHhhc---ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 53211 1111 111111 112355899999999999999999777643
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.4e-35 Score=307.20 Aligned_cols=218 Identities=18% Similarity=0.284 Sum_probs=172.9
Q ss_pred ccccccCceeEEEEEE-cCCeEEEEEEccCccccCCcHHHHHHHHHHH-cCCCCCCcccceEEEec----CCceEEEEec
Q 006031 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESV-GGLRHPNLVPLRAYFQA----KEERLLIYDY 463 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~----~~~~~lV~e~ 463 (664)
++||+|+||.||+|.. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. ....++||||
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 96 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 96 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence 5799999999999996 5688999999853 24567788877 66699999999999876 6678999999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCC---CCCeEEeeccccccccC
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP---DFEACLADYCLTALTAD 540 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~ 540 (664)
+++|+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred cCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 9999999999742 234699999999999999999999999 9999999999999998 7899999999886432
Q ss_pred CCCCCCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChhhHHHHH-HhhccCC-Cch----hHH
Q 006031 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWV-RSAREDD-GAE----DER 614 (664)
Q Consensus 541 ~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~-~~~----~~~ 614 (664)
...++.++|||||||++|||+||+.||...... ...... ....... ..+ ...
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGMKTRIRMGQYEFPNPEWSEV 229 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSCCSSCTTCCSSCHHHHTTS
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcch--hhhHHHHHHHhhccccCCchhcccC
Confidence 234577999999999999999999999653211 000000 0000000 011 223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006031 615 LGMLLEVAIACNSASPEQRPTMWQVLK 641 (664)
Q Consensus 615 ~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 641 (664)
+..+.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 230 SEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 566899999999999999999999987
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.6e-35 Score=309.47 Aligned_cols=235 Identities=14% Similarity=0.137 Sum_probs=179.3
Q ss_pred HHhccccccCceeEEEEEEcCCeEEEEEEccCccc------cCCcHHHHHHHHHHHcCCC---------CCCcccceEEE
Q 006031 387 ASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKL------AGTSNEMYEQHMESVGGLR---------HPNLVPLRAYF 451 (664)
Q Consensus 387 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~------~~~~~~~~~~e~~~l~~l~---------H~niv~l~g~~ 451 (664)
...+.||+|+||+||+|+. +++.||||++..... .....+.+.+|+++++.++ |||||++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 4568899999999999998 679999999975432 2234477889999888775 66666666553
Q ss_pred -----------------ec-------------CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006031 452 -----------------QA-------------KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501 (664)
Q Consensus 452 -----------------~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~ 501 (664)
.+ .+..++||||+++|++.+.+.. ..+++..+..|+.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 32 6789999999999987777631 45899999999999999999
Q ss_pred HHH-hcCCcccCCCCCCCeEeCCCC--------------------CeEEeeccccccccCCCCCCCCCCCcccCcccccc
Q 006031 502 YIH-QAWRLVHGNLKSSNVLLGPDF--------------------EACLADYCLTALTADSLQDDDPDNLLYKAPETRNA 560 (664)
Q Consensus 502 yLH-~~~~ivHrDlk~~NILl~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~ 560 (664)
||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||.+.+
T Consensus 176 ~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGCC
T ss_pred HHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhcC
Confidence 999 78 999999999999999887 8999999999876543 2468999999999873
Q ss_pred CCCCCchhhHHHHHHH-HHHHHcCCCCCCCCCCChhhHHHHHH-hhccCC----CchhHHHHHHHHHHHHcccCCCCCCC
Q 006031 561 SHQATSKSDVYSFGVL-LLELLTGKPPSQHSFLVPNEMMNWVR-SAREDD----GAEDERLGMLLEVAIACNSASPEQRP 634 (664)
Q Consensus 561 ~~~~~~ksDVwSfGvv-l~elltG~~P~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RP 634 (664)
. .+.++||||+|++ .+++++|..||..... ...+.+... ...... ......+..+.+++.+||+.+
T Consensus 252 -~-~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 252 -D-GDYQFDIYRLMKKENNNRWGEYHPYSNVLW-LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp -C-SSHHHHHHHHHHHHHTTCTTSCCTHHHHHH-HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred -C-CccceehhhhhCCCCcccccccCCCcchhh-hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----
Confidence 3 3889999998777 7788889999743100 011111111 111111 123456778999999999866
Q ss_pred CHHHHH
Q 006031 635 TMWQVL 640 (664)
Q Consensus 635 t~~ev~ 640 (664)
|++|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 888887
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.3e-28 Score=256.70 Aligned_cols=193 Identities=33% Similarity=0.496 Sum_probs=167.1
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcCcCCCCCCCcc--ccceEecC----CcEEEEEEcCCCCCC--cCCCccccCCCCCC
Q 006031 37 SLLPSDAQVLLAFKAKADLRNHLFFSQNKSLHFCQ--WQGVICYQ----QKVVRVVLQGLDLGG--IFAPNSLTKLDQLR 108 (664)
Q Consensus 37 ~~~~~~~~aLl~~k~~~~~~~~~~~~~~~~~~~C~--w~gv~C~~----~~v~~l~l~~~~l~g--~~~p~~l~~l~~L~ 108 (664)
.|.++|++||++||+++.++..+ -+|+.+.+||. |.||+|+. ++|+.|+|+++++.| .+++ .++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 48899999999999998655433 23444578999 99999975 799999999999999 7755 899999999
Q ss_pred EEEecC-CCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCC
Q 006031 109 VLGLQN-NSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186 (664)
Q Consensus 109 ~L~L~~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 186 (664)
+|+|++ |++.+.+| .|+++++|++|+|++|+++|.+|..|.++++|++|+|++|+++|.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 99999998 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCC--CCC-CCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 187 RFNGSIPPL--NQS-SLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 187 ~l~g~~p~~--~~~-~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
+++|.+|.. .+. .|+.|++++|+++|.+|..-.-..+..+.+.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N 207 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRN 207 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSS
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCC
Confidence 999999864 565 899999999999998884322112555666665
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.8e-29 Score=279.90 Aligned_cols=184 Identities=11% Similarity=0.009 Sum_probs=127.5
Q ss_pred cccccCceeEEEEE-EcCCeEEEEEEccCccccC--------CcHHHHHHHHHHHcCC-CCCCcccceEEEecCCceEEE
Q 006031 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAG--------TSNEMYEQHMESVGGL-RHPNLVPLRAYFQAKEERLLI 460 (664)
Q Consensus 391 ~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~--------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 460 (664)
..+.|++|.+++++ .--|..+++|.+....... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35677777766654 3457789999996542211 2235799999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccC
Q 006031 461 YDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540 (664)
Q Consensus 461 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 540 (664)
|||++|++|.++|.. ..+++.. +|+.||+.||+|+|++ +||||||||+|||+++++++||+|||+++....
T Consensus 321 MEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999963 3456543 5899999999999999 999999999999999999999999999987654
Q ss_pred CCCC--CCCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHcCCC
Q 006031 541 SLQD--DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585 (664)
Q Consensus 541 ~~~~--~~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~elltG~~ 585 (664)
.... ...||+.|||||.+. +++..++|+||+|++++++.++..
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~--g~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFA--ENKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC-------------------CCCCTTHH
T ss_pred CCccccCceechhhccHHHhC--CCCCCcccccccccchhhhccccc
Confidence 3321 235899999999985 456778999999999887765543
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=2.8e-27 Score=276.43 Aligned_cols=193 Identities=27% Similarity=0.318 Sum_probs=162.6
Q ss_pred ChhHHHHHHHHHhccCCCCCCcCcCCCCCCCccccceEecCCcEEEEEEcCCCCCCc---CCC-----------------
Q 006031 39 LPSDAQVLLAFKAKADLRNHLFFSQNKSLHFCQWQGVICYQQKVVRVVLQGLDLGGI---FAP----------------- 98 (664)
Q Consensus 39 ~~~~~~aLl~~k~~~~~~~~~~~~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~g~---~~p----------------- 98 (664)
.++|++|||+||+++.++. ..-+|+.++|||+|.||+|+.++|+.|+|+++++.|. +++
T Consensus 10 ~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~ 88 (768)
T 3rgz_A 10 LYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSH 88 (768)
T ss_dssp HHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSC
T ss_pred CHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCC
Confidence 4689999999999987555 4334445689999999999999999999999999986 433
Q ss_pred -----ccccCCCCCCEEEecCCCCCCCCC---CCCCCCCCCEEeccCCcCCCCCcccc-cCCCCCCEEeccCCcCcCCCc
Q 006031 99 -----NSLTKLDQLRVLGLQNNSLTGPIP---DLSGLVNLKSLFLDHNFFTGSFPPSL-LSLHRLKTLDLSYNNLSGPLP 169 (664)
Q Consensus 99 -----~~l~~l~~L~~L~L~~N~l~g~~p---~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~~p 169 (664)
..+++|++|++|+|++|.|+|.+| .++++++|++|||++|.++|.+|..+ .++++|++|||++|++++..|
T Consensus 89 ~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 168 (768)
T 3rgz_A 89 INGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANV 168 (768)
T ss_dssp EEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETH
T ss_pred cCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCC
Confidence 467888899999999999988776 47888999999999999988888876 788999999999999998888
Q ss_pred hh---hcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 170 KE---LASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 170 ~~---~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
.. +.++++|++|+|++|+++|.+|...+++|++|+|++|++++.+|....+.++..+.+.+|.
T Consensus 169 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 169 VGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp HHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred hhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 77 7888899999999999988888888889999999999999888876667777777777764
No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.4e-26 Score=258.35 Aligned_cols=183 Identities=13% Similarity=0.131 Sum_probs=144.6
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCccccCC------cHHHHHHHHHHHcCCCCCCcccceEEEecCCceEEEEe
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGT------SNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYD 462 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 462 (664)
.++||+|+||+||+|.. .+..+++|+......... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 56899999999999954 456788888654332111 13458999999999999999987777778888899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCC
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 542 (664)
|+++++|.++++. +..|+.|+++||+|||++ +|+||||||+|||+++ ++||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999952 458999999999999999 9999999999999999 99999999998765432
Q ss_pred C---------CCCCCCCcccCccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCC
Q 006031 543 Q---------DDDPDNLLYKAPETRNAS-HQATSKSDVYSFGVLLLELLTGKPPSQ 588 (664)
Q Consensus 543 ~---------~~~~~~~~y~aPE~~~~~-~~~~~ksDVwSfGvvl~elltG~~P~~ 588 (664)
. ....||+.|||||++... ..|+.++|+|+..+-.++-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1 123578999999998621 346778899999999999888887764
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=1.4e-25 Score=261.90 Aligned_cols=189 Identities=20% Similarity=0.283 Sum_probs=160.0
Q ss_pred ChhHHHHHHHHHhccCCCCCCcCcCCC---CCCC--ccc------------cceEecC-CcEEEEEEcCCCCCCcCCCcc
Q 006031 39 LPSDAQVLLAFKAKADLRNHLFFSQNK---SLHF--CQW------------QGVICYQ-QKVVRVVLQGLDLGGIFAPNS 100 (664)
Q Consensus 39 ~~~~~~aLl~~k~~~~~~~~~~~~~~~---~~~~--C~w------------~gv~C~~-~~v~~l~l~~~~l~g~~~p~~ 100 (664)
..+|+.||++||+++..+ .|+.+. ..+| |.| .||+|+. ++|+.|+|++++|.|.+|+ +
T Consensus 267 ~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~-~ 342 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD-A 342 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG-G
T ss_pred chHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch-H
Confidence 457999999999998655 554332 2355 999 9999984 8999999999999999876 8
Q ss_pred ccCCCCCCEEEe-cCCCCCCC-----------------------------------------------------------
Q 006031 101 LTKLDQLRVLGL-QNNSLTGP----------------------------------------------------------- 120 (664)
Q Consensus 101 l~~l~~L~~L~L-~~N~l~g~----------------------------------------------------------- 120 (664)
|++|++|+.|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77766554
Q ss_pred -----------------CC-CCCCCCCCCEEeccCCcCCC-----------------CCccccc--CCCCCCEEeccCCc
Q 006031 121 -----------------IP-DLSGLVNLKSLFLDHNFFTG-----------------SFPPSLL--SLHRLKTLDLSYNN 163 (664)
Q Consensus 121 -----------------~p-~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~ 163 (664)
+| .|++|++|++|+|++|+|+| .+|..++ +|++|++|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 55 58889999999999999998 4999988 99999999999999
Q ss_pred CcCCCchhhcCCCCCCeeeCcCCc-Ccc-CCCCC---------CCCCCcEEEccCCcccccCCC---CCcccccCccccc
Q 006031 164 LSGPLPKELASQGRLYSLRLDVNR-FNG-SIPPL---------NQSSLKIFNVSGNNFTGAITV---TSTLSRFGISSFL 229 (664)
Q Consensus 164 l~g~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~---------~~~~L~~l~l~~N~l~g~~p~---~~~l~~~~~~~~~ 229 (664)
+.|.+|..++++++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|+|+ .+|. ...+.++..+.+.
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls 581 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCV 581 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECT
T ss_pred CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECC
Confidence 999999999999999999999998 998 77742 4458999999999999 6664 4566777777777
Q ss_pred cCC
Q 006031 230 FNP 232 (664)
Q Consensus 230 ~N~ 232 (664)
+|.
T Consensus 582 ~N~ 584 (876)
T 4ecn_A 582 HNK 584 (876)
T ss_dssp TSC
T ss_pred CCC
Confidence 774
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=2.5e-25 Score=254.17 Aligned_cols=189 Identities=19% Similarity=0.288 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHhccCCCCCC--------cCcCCCCCCCccc---cceEecC-CcEEEEEEcCCCCCCcCCCccccCCCCC
Q 006031 40 PSDAQVLLAFKAKADLRNHL--------FFSQNKSLHFCQW---QGVICYQ-QKVVRVVLQGLDLGGIFAPNSLTKLDQL 107 (664)
Q Consensus 40 ~~~~~aLl~~k~~~~~~~~~--------~~~~~~~~~~C~w---~gv~C~~-~~v~~l~l~~~~l~g~~~p~~l~~l~~L 107 (664)
..|+.||.+||.+++.+++. .-+|..+.+||.| .||+|+. ++|+.|+|++++|.|.+|+ ++++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhcCccc
Confidence 47999999999998655322 0135556899999 9999965 7999999999999998875 89999999
Q ss_pred CEEEecCCC-----------------------------------------------------------------------
Q 006031 108 RVLGLQNNS----------------------------------------------------------------------- 116 (664)
Q Consensus 108 ~~L~L~~N~----------------------------------------------------------------------- 116 (664)
++|+|++|+
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999884
Q ss_pred -------CCCCCC-CCCCCCCCCEEeccCCcCCCC-----------------Cccccc--CCCCCCEEeccCCcCcCCCc
Q 006031 117 -------LTGPIP-DLSGLVNLKSLFLDHNFFTGS-----------------FPPSLL--SLHRLKTLDLSYNNLSGPLP 169 (664)
Q Consensus 117 -------l~g~~p-~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p 169 (664)
|+| +| +|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 345 45 588899999999999999986 999988 99999999999999999999
Q ss_pred hhhcCCCCCCeeeCcCCc-Ccc-CCCCC--C------CCCCcEEEccCCcccccCCC---CCcccccCccccccC
Q 006031 170 KELASQGRLYSLRLDVNR-FNG-SIPPL--N------QSSLKIFNVSGNNFTGAITV---TSTLSRFGISSFLFN 231 (664)
Q Consensus 170 ~~~~~l~~L~~L~l~~N~-l~g-~~p~~--~------~~~L~~l~l~~N~l~g~~p~---~~~l~~~~~~~~~~N 231 (664)
..++++++|+.|+|++|+ ++| .+|.. . +++|+.|++++|+++ .+|. ...+.++..+.+.+|
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 999999999999999998 888 66642 2 266777777777777 4553 344555555555555
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=6.5e-24 Score=247.91 Aligned_cols=164 Identities=28% Similarity=0.471 Sum_probs=142.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC------------------------------------
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD------------------------------------ 123 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~------------------------------------ 123 (664)
..+..|+|++|.+.|.+| ..++++++|+.|+|++|.++|.+|.
T Consensus 514 ~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIP-AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECC-GGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCC-HHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 345666666666666553 3677777777788877777776661
Q ss_pred -----------------------------------CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCC
Q 006031 124 -----------------------------------LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPL 168 (664)
Q Consensus 124 -----------------------------------~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 168 (664)
++++++|++|||++|+|+|.+|.+|+++++|+.|+|++|+|+|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 233578999999999999999999999999999999999999999
Q ss_pred chhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCCccCcCCCCC
Q 006031 169 PKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCGEIIHKECNP 245 (664)
Q Consensus 169 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg~~~~~~c~~ 245 (664)
|..++++++|+.|+|++|+++|.||.. .+++|++|||++|+|+|.||....+..+....|.||+++||.|+. .|..
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 999999999999999999999999975 789999999999999999999989999999999999999999887 8864
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.89 E-value=5.6e-24 Score=223.05 Aligned_cols=192 Identities=21% Similarity=0.273 Sum_probs=159.7
Q ss_pred CChhHHHHHHHHHhccCCCC-C-C-cCc--CCCCCCCccccceEecC----------CcEEEEEEcCCCCCCcCCCcccc
Q 006031 38 LLPSDAQVLLAFKAKADLRN-H-L-FFS--QNKSLHFCQWQGVICYQ----------QKVVRVVLQGLDLGGIFAPNSLT 102 (664)
Q Consensus 38 ~~~~~~~aLl~~k~~~~~~~-~-~-~~~--~~~~~~~C~w~gv~C~~----------~~v~~l~l~~~~l~g~~~p~~l~ 102 (664)
...+|++||++||+.+..+. . . .|. .....++|.|.||.|+. .+|+.|+|+++++.. +++ .++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~-lp~-~l~ 101 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQ-FPD-QAF 101 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSS-CCS-CGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCchh-cCh-hhh
Confidence 45689999999999874332 2 2 452 12347899999999952 789999999999994 654 799
Q ss_pred CCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcC-------
Q 006031 103 KLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELAS------- 174 (664)
Q Consensus 103 ~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~------- 174 (664)
+|++|++|+|++|+|+ .+| .++++++|++|+|++|+++ .+|..++++++|++|+|++|++.|.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 555 6999999999999999999 89999999999999999999999999988765
Q ss_pred --CCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCC
Q 006031 175 --QGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSL 234 (664)
Q Consensus 175 --l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~l 234 (664)
+++|+.|+|++|+++ .+|.. .+++|+.|+|++|++++.++....+.++..+.+.+|...
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 999999999999998 66653 678899999999999987666566777777778777543
No 259
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=2.7e-21 Score=194.53 Aligned_cols=168 Identities=20% Similarity=0.217 Sum_probs=143.6
Q ss_pred CCccccceEecC--------------------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCC
Q 006031 68 HFCQWQGVICYQ--------------------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSG 126 (664)
Q Consensus 68 ~~C~w~gv~C~~--------------------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~ 126 (664)
+||.|.|.+|.. ..+..|+|++|++.+ +++..+.++++|++|+|++|+|++.+|. |.+
T Consensus 3 ~Cp~~~gC~C~~~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 3 TCETVTGCTCNEGKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLAT-LSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp -CHHHHSSEEEGGGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred cCCCCCceEcCCCCeEEecCCCCccccCCCCCCCCCEEEccCCCcCc-cCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 577787777731 246789999999998 5566899999999999999999998885 889
Q ss_pred CCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEE
Q 006031 127 LVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFN 204 (664)
Q Consensus 127 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ 204 (664)
+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|+|++.++.. .+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 999999999999999777778899999999999999999766667899999999999999999777742 778999999
Q ss_pred ccCCcccccCCC-CCcccccCccccccCCCCCC
Q 006031 205 VSGNNFTGAITV-TSTLSRFGISSFLFNPSLCG 236 (664)
Q Consensus 205 l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~lcg 236 (664)
|++|+|++.++. ...+.++..+.+.+|++.|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999988773 45677788889999998775
No 260
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=1.8e-22 Score=206.65 Aligned_cols=141 Identities=12% Similarity=0.143 Sum_probs=114.6
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccC----------------CcHHHHHHHHHHHcCCCCCCcccceEEEec
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG----------------TSNEMYEQHMESVGGLRHPNLVPLRAYFQA 453 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~----------------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 453 (664)
+.||+|+||.||+|...+|+.||+|.++...... .....+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 7899999999999999889999999996432211 12456899999999998 5 777776544
Q ss_pred CCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeecc
Q 006031 454 KEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC 533 (664)
Q Consensus 454 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfG 533 (664)
+..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 173 -~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NILl~-~~~vkl~DFG 237 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVS-EEGIWIIDFP 237 (282)
T ss_dssp -ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred -cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEEEE-CCcEEEEECC
Confidence 56799999999999988 521 23457999999999999998 999999999999999 9999999999
Q ss_pred ccccccCCCCCCCCCCCcccCccccc
Q 006031 534 LTALTADSLQDDDPDNLLYKAPETRN 559 (664)
Q Consensus 534 la~~~~~~~~~~~~~~~~y~aPE~~~ 559 (664)
+++.. ..|+|||++.
T Consensus 238 ~a~~~-----------~~~~a~e~l~ 252 (282)
T 1zar_A 238 QSVEV-----------GEEGWREILE 252 (282)
T ss_dssp TCEET-----------TSTTHHHHHH
T ss_pred CCeEC-----------CCCCHHHHHH
Confidence 98743 2467899774
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.84 E-value=2.2e-21 Score=201.94 Aligned_cols=161 Identities=29% Similarity=0.467 Sum_probs=115.6
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCC-CCCEEeccCCcCCCCCcccccC-------
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLV-NLKSLFLDHNFFTGSFPPSLLS------- 150 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~-~L~~L~L~~N~l~g~~p~~~~~------- 150 (664)
..+..|+|++|.+.+.+ |..+.++++|++|+|++|+++|.+| .+++++ +|++|+|++|+++|.+|..+..
T Consensus 125 ~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTL-PPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCC-CGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcC-ChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 46777888888887755 3477778888888888888877766 466666 6677777666666655555554
Q ss_pred ----------------CCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccc
Q 006031 151 ----------------LHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 151 ----------------l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g 212 (664)
+++|+.|+|++|++++.+|. +..+++|++|+|++|+++|.+|.. .+++|+.|+|++|+|+|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 44455555555555444433 455566666666666666666653 67889999999999999
Q ss_pred cCCCCCcccccCccccccCCCCCCccCcCCC
Q 006031 213 AITVTSTLSRFGISSFLFNPSLCGEIIHKEC 243 (664)
Q Consensus 213 ~~p~~~~l~~~~~~~~~~N~~lcg~~~~~~c 243 (664)
.+|....+.++..+.+.+|+++||.|++ .|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9998888899999999999999998775 46
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.6e-20 Score=183.70 Aligned_cols=148 Identities=24% Similarity=0.231 Sum_probs=113.0
Q ss_pred CCCCccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEE
Q 006031 66 SLHFCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSL 133 (664)
Q Consensus 66 ~~~~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L 133 (664)
+.+.|+|++|.|+. ..++.|+|++|.+.+ ++|..+.++++|++|+|++|+|++.++. |.++++|++|
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITK-LEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCc-cCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 37889999999975 256778888888887 4455778888888888888888766554 6778888888
Q ss_pred eccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCccc
Q 006031 134 FLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFT 211 (664)
Q Consensus 134 ~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~ 211 (664)
+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|.++
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 88888888655556777888888888888887 77888888888888888888887655542 5677888888888887
Q ss_pred ccCC
Q 006031 212 GAIT 215 (664)
Q Consensus 212 g~~p 215 (664)
+..+
T Consensus 173 c~c~ 176 (229)
T 3e6j_A 173 CECR 176 (229)
T ss_dssp TTBG
T ss_pred CCcc
Confidence 7654
No 263
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.3e-19 Score=184.36 Aligned_cols=150 Identities=22% Similarity=0.240 Sum_probs=100.9
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.++.|+|++|.+.+ +++..+.++++|++|+|++|+|+...+. |.++++|++|+|++|++++..+..+.++++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35677888888776 4555788888888888888888866654 567888888888888887555556677777777777
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFN 231 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N 231 (664)
++|++++..|..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|++++..+. ...+.++..+.+.+|
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 777777666666677777777777777776554431 455666666666666555442 123344444444444
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=2.7e-20 Score=183.42 Aligned_cols=146 Identities=23% Similarity=0.249 Sum_probs=95.5
Q ss_pred ccccceEecCC-----------cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccC
Q 006031 70 CQWQGVICYQQ-----------KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDH 137 (664)
Q Consensus 70 C~w~gv~C~~~-----------~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~ 137 (664)
|.|..+.|+.. .++.|+|++|.+++..++..+.++++|++|+|++|+|++..| .|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 67887777541 345666677766664333446666777777777777766665 466667777777777
Q ss_pred CcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCC
Q 006031 138 NFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 138 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p 215 (664)
|++++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7776555556666777777777777776666666666677777777777776665543 55666677777776665543
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.9e-19 Score=175.45 Aligned_cols=146 Identities=22% Similarity=0.222 Sum_probs=119.5
Q ss_pred CccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEecc
Q 006031 69 FCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLD 136 (664)
Q Consensus 69 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~ 136 (664)
.|.|.+|.|+. ..++.|+|++|++.+ +++..+.++++|++|+|++|+|++.++. |.++++|++|+|+
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 48899999964 257888999998886 5565688889999999999999877664 6788999999999
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccC
Q 006031 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 137 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~ 214 (664)
+|++++..+..+.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|++++|.+++..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 99998655566788899999999999998766666888889999999999988766642 6788899999999888776
Q ss_pred C
Q 006031 215 T 215 (664)
Q Consensus 215 p 215 (664)
|
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 6
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=6.2e-19 Score=173.62 Aligned_cols=153 Identities=20% Similarity=0.235 Sum_probs=87.7
Q ss_pred ccccceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccc
Q 006031 70 CQWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSL 148 (664)
Q Consensus 70 C~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~ 148 (664)
|.|..|.|+. ++|.. +|. .+. ++|+.|+|++|+|++..| .|.++++|++|+|++|++++..|..|
T Consensus 11 C~~~~v~c~~----------~~l~~-iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 76 (220)
T 2v9t_B 11 CSNNIVDCRG----------KGLTE-IPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAF 76 (220)
T ss_dssp EETTEEECTT----------SCCSS-CCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTT
T ss_pred ECCCEEEcCC----------CCcCc-CCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHh
Confidence 7788888754 33333 222 232 456666666666665555 45566666666666666665556666
Q ss_pred cCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCc
Q 006031 149 LSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGI 225 (664)
Q Consensus 149 ~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~ 225 (664)
.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+. ...+.++..
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 156 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 156 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCE
Confidence 66666666666666666333333455666666666666666555442 455666666666666655542 233445555
Q ss_pred cccccCCCCCC
Q 006031 226 SSFLFNPSLCG 236 (664)
Q Consensus 226 ~~~~~N~~lcg 236 (664)
+.+.+|++.|.
T Consensus 157 L~L~~N~~~c~ 167 (220)
T 2v9t_B 157 MHLAQNPFICD 167 (220)
T ss_dssp EECCSSCEECS
T ss_pred EEeCCCCcCCC
Confidence 55666666554
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=3.6e-18 Score=173.85 Aligned_cols=155 Identities=23% Similarity=0.198 Sum_probs=138.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.+ + + .+.++++|++|+|++|++++.+|. |.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~-~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-S-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-C-G-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-c-h-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 678999999999998 3 3 799999999999999999988875 78999999999999999977777799999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC-CcccccCccccccCCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT-STLSRFGISSFLFNPSLC 235 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~-~~l~~~~~~~~~~N~~lc 235 (664)
|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++.+|.. ..+.++..+.+.+|++.|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999777777899999999999999999877753 7899999999999999988753 567788889999999887
Q ss_pred Cc
Q 006031 236 GE 237 (664)
Q Consensus 236 g~ 237 (664)
..
T Consensus 220 ~~ 221 (272)
T 3rfs_A 220 TC 221 (272)
T ss_dssp CT
T ss_pred cC
Confidence 64
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=168.75 Aligned_cols=158 Identities=20% Similarity=0.173 Sum_probs=136.2
Q ss_pred ceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC--CCCCCCCCEEeccCCcCCCCCcccccCC
Q 006031 74 GVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFPPSLLSL 151 (664)
Q Consensus 74 gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~~~l~~L~~L~L~~N~l~g~~p~~~~~l 151 (664)
+-+|.. ..++++++.|+. +|. .+. ..++.|+|++|+|++.+|. |.++++|+.|+|++|++++..|..|.++
T Consensus 8 ~C~C~~---~~l~~s~n~l~~-iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 80 (220)
T 2v70_A 8 KCRCEG---TTVDCSNQKLNK-IPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 80 (220)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCEECC---CEeEeCCCCccc-Ccc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC
Confidence 445654 379999999987 543 453 4578999999999998763 8899999999999999998778899999
Q ss_pred CCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCcccc
Q 006031 152 HRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSF 228 (664)
Q Consensus 152 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~ 228 (664)
++|++|+|++|+|++..|..|..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|++.+|. ...+.++..+.+
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 160 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNL 160 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEe
Confidence 99999999999999888888999999999999999999988764 789999999999999999773 355677888899
Q ss_pred ccCCCCCCcc
Q 006031 229 LFNPSLCGEI 238 (664)
Q Consensus 229 ~~N~~lcg~~ 238 (664)
.+|++.|...
T Consensus 161 ~~N~l~c~c~ 170 (220)
T 2v70_A 161 LANPFNCNCY 170 (220)
T ss_dssp CSCCEECSGG
T ss_pred cCcCCcCCCc
Confidence 9999988644
No 269
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6e-19 Score=187.28 Aligned_cols=165 Identities=19% Similarity=0.168 Sum_probs=141.4
Q ss_pred ccccceEecC-----------CcEEEEEEcCCCCCCcCCCcccc-CCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEecc
Q 006031 70 CQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLT-KLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLD 136 (664)
Q Consensus 70 C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~-~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~ 136 (664)
|.|..|.|+. ..++.|+|++|.|++ +++..+. ++++|+.|+|++|+|++..| .|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 7799999964 247789999999998 5565677 99999999999999999887 59999999999999
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-----CCCCCcEEEccCCccc
Q 006031 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-----NQSSLKIFNVSGNNFT 211 (664)
Q Consensus 137 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-----~~~~L~~l~l~~N~l~ 211 (664)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999777778999999999999999999888999999999999999999999755442 5889999999999999
Q ss_pred ccCCCCCccccc-----CccccccCCCCCCc
Q 006031 212 GAITVTSTLSRF-----GISSFLFNPSLCGE 237 (664)
Q Consensus 212 g~~p~~~~l~~~-----~~~~~~~N~~lcg~ 237 (664)
+..+ ..+..+ ..+.+.+|++.|..
T Consensus 177 ~l~~--~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 177 KLPL--TDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCH--HHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCH--HHhhhccHhhcceEEecCCCccCCc
Confidence 7654 223322 45788999999864
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=5.3e-19 Score=170.22 Aligned_cols=150 Identities=22% Similarity=0.220 Sum_probs=120.9
Q ss_pred EEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC--CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCC
Q 006031 85 VVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYN 162 (664)
Q Consensus 85 l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 162 (664)
|++++++|.. +|. .+.. +|++|+|++|+|++.++. |.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 l~~s~~~l~~-ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 13 VDCTGRGLKE-IPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EECTTSCCSS-CCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEcCCCCcCc-Ccc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4445666754 543 4543 899999999999998884 889999999999999999988999999999999999999
Q ss_pred cCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCCcc
Q 006031 163 NLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCGEI 238 (664)
Q Consensus 163 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg~~ 238 (664)
+|++..|..+..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|.|++..+.......+....+.++...|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 999888888999999999999999999988864 7889999999999999887632111122223445555667654
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=4.4e-18 Score=167.49 Aligned_cols=133 Identities=20% Similarity=0.246 Sum_probs=120.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..++.|+|++|.+.+ +++..+..+++|+.|+|++|+|++..| .|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 110 (220)
T 2v9t_B 32 ETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLL 110 (220)
T ss_dssp TTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEE
Confidence 478999999999998 666689999999999999999999877 699999999999999999944444578899999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCccccc
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGA 213 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~ 213 (664)
|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|.++..
T Consensus 111 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 111 LNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999999988999999999999999999999887753 688999999999999864
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.1e-18 Score=167.93 Aligned_cols=166 Identities=26% Similarity=0.323 Sum_probs=129.6
Q ss_pred CccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEecc
Q 006031 69 FCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLD 136 (664)
Q Consensus 69 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~ 136 (664)
.|.|+.|.|+. ..++.|+|++|.+++..+...++++++|++|+|++|+|++.+| .|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 38899999974 2688999999999984332358999999999999999999987 69999999999999
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCC-CCCcEEEccCCcccccCC
Q 006031 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQ-SSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 137 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~~L~~l~l~~N~l~g~~p 215 (664)
+|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|.+++..+...+ ..|+...+..+......|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 9999988888899999999999999999999999999999999999999999987763211 112222334444444444
Q ss_pred CCCcccccCccccccCCCCCC
Q 006031 216 VTSTLSRFGISSFLFNPSLCG 236 (664)
Q Consensus 216 ~~~~l~~~~~~~~~~N~~lcg 236 (664)
..+.......+..+...|.
T Consensus 167 --~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 167 --SKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp --TTTTTSBGGGSCTTTCCCC
T ss_pred --hHHcCCChhhCcHhhcCcC
Confidence 3444444455555555554
No 273
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.1e-18 Score=176.12 Aligned_cols=135 Identities=15% Similarity=0.147 Sum_probs=104.4
Q ss_pred hccccccCceeEEEEEE-cCCeE--EEEEEccCccccC----------------------CcHHHHHHHHHHHcCCCCCC
Q 006031 389 AELLGKGSLGTTYKAVL-DNRLI--VCVKRLDASKLAG----------------------TSNEMYEQHMESVGGLRHPN 443 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~~----------------------~~~~~~~~e~~~l~~l~H~n 443 (664)
.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|+..+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 36799999999999997 78888 9999875432110 01236889999999998886
Q ss_pred c--ccceEEEecCCceEEEEecCCC-C----CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCcccCCCC
Q 006031 444 L--VPLRAYFQAKEERLLIYDYQPN-G----SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH-QAWRLVHGNLK 515 (664)
Q Consensus 444 i--v~l~g~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~ivHrDlk 515 (664)
+ ..++++ +..++||||+.+ | +|.++... .++.....++.|++.||.||| +. +|+|||||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~-givHrDlk 198 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEA-ELVHADLS 198 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTS-CEECSSCS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHC-CEEeCCCC
Confidence 5 333332 367899999942 4 77776531 235567889999999999999 77 99999999
Q ss_pred CCCeEeCCCCCeEEeeccccccc
Q 006031 516 SSNVLLGPDFEACLADYCLTALT 538 (664)
Q Consensus 516 ~~NILl~~~~~~ki~DfGla~~~ 538 (664)
|+|||+++ .++|+|||++...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999764
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.75 E-value=8.6e-18 Score=172.70 Aligned_cols=155 Identities=21% Similarity=0.129 Sum_probs=107.3
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+++ +++ .+.+++|++|+|++|+|+..+..+.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 55 ~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 455566666666655 222 25666677777777777644445677777788888888877655666777788888888
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCCc
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCGE 237 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg~ 237 (664)
++|+|++..|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+..++.......+..+.+.+||+.|..
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 888887655556677778888888888887544432 567888888888888865554455556777788889888853
No 275
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=3e-17 Score=162.55 Aligned_cols=159 Identities=21% Similarity=0.208 Sum_probs=133.6
Q ss_pred cccceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCccccc
Q 006031 71 QWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLL 149 (664)
Q Consensus 71 ~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~ 149 (664)
.|..-.|+. +.++.+++++.. +|. .+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|.
T Consensus 13 ~~~~~~Cs~---~~v~c~~~~l~~-ip~-~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 13 CPSQCSCSG---TTVDCRSKRHAS-VPA-GIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CCTTCEEET---TEEECTTSCCSS-CCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCCEEeC---CEeEccCCCcCc-cCC-CCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 355666764 468899999887 543 443 899999999999999887 588999999999999999855556679
Q ss_pred CCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCcc
Q 006031 150 SLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGIS 226 (664)
Q Consensus 150 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~ 226 (664)
++++|++|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+. ...+.++..+
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 9999999999999999777777899999999999999999 56653 789999999999999987763 3556788888
Q ss_pred ccccCCCCCCc
Q 006031 227 SFLFNPSLCGE 237 (664)
Q Consensus 227 ~~~~N~~lcg~ 237 (664)
.+.+|++.|..
T Consensus 165 ~l~~N~~~c~c 175 (229)
T 3e6j_A 165 YLFGNPWDCEC 175 (229)
T ss_dssp ECTTSCBCTTB
T ss_pred EeeCCCccCCc
Confidence 99999998864
No 276
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.74 E-value=1.2e-17 Score=182.73 Aligned_cols=158 Identities=20% Similarity=0.175 Sum_probs=122.7
Q ss_pred ccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc
Q 006031 72 WQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 72 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~ 139 (664)
|..|.|.. ..++.|+|++|++.+ +++..|.++++|+.|+|++|+|++..| .|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCce-ECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 56777753 368899999999998 556689999999999999999999887 68999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccCCcccccCCC
Q 006031 140 FTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 140 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~N~l~g~~p~ 216 (664)
+++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|+..+.+|.. .+++|+.|+|++|++++. |.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 213 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN 213 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc
Confidence 99666667899999999999999999655557777777777777775444455432 556677777777777653 44
Q ss_pred CCcccccCccccccC
Q 006031 217 TSTLSRFGISSFLFN 231 (664)
Q Consensus 217 ~~~l~~~~~~~~~~N 231 (664)
...+.++..+.+.+|
T Consensus 214 ~~~l~~L~~L~Ls~N 228 (452)
T 3zyi_A 214 LTPLVGLEELEMSGN 228 (452)
T ss_dssp CTTCTTCCEEECTTS
T ss_pred ccccccccEEECcCC
Confidence 455555555555555
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.74 E-value=1.2e-17 Score=171.14 Aligned_cols=155 Identities=23% Similarity=0.243 Sum_probs=86.5
Q ss_pred cEEEEEEcCCC-CCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 81 KVVRVVLQGLD-LGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 81 ~v~~l~l~~~~-l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
.+..|+|++|. +.. +++..+..+++|++|+|++|++++.+| .+.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 81 ~L~~L~l~~n~~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRS-VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TCCEEECCSCTTCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCCCCCccc-cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 45555555554 333 334455555555555555555555544 255556666666666666544444455566666666
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPSLC 235 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~lc 235 (664)
|++|++++..+..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++.++. ...+.++..+.+.+|++.|
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 6666665444444555666666666666666554432 455666666666666655432 2334555566666776666
Q ss_pred C
Q 006031 236 G 236 (664)
Q Consensus 236 g 236 (664)
.
T Consensus 240 ~ 240 (285)
T 1ozn_A 240 D 240 (285)
T ss_dssp S
T ss_pred C
Confidence 4
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.73 E-value=4.5e-18 Score=190.72 Aligned_cols=161 Identities=17% Similarity=0.164 Sum_probs=137.2
Q ss_pred CccccceEecC-------------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEe
Q 006031 69 FCQWQGVICYQ-------------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLF 134 (664)
Q Consensus 69 ~C~w~gv~C~~-------------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~ 134 (664)
.|.|.|| |+. ..++.|+|++|.+++ ++|..+.++++|++|+|++|++++.+| .|+++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5999999 863 368999999999998 556689999999999999999999887 599999999999
Q ss_pred ccCCcCCCCCcccccCCCCCCEEeccCCcCcC-CCchhhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccCCcc
Q 006031 135 LDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSG-PLPKELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSGNNF 210 (664)
Q Consensus 135 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~N~l 210 (664)
|++|++++..|..|+++++|++|+|++|++++ .+|..++.+++|+.|+|++|++.+.+|.. .+++|+.|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999998878889999999999999999997 57888999999999999999977777642 788999999999999
Q ss_pred cccCCCC-CcccccCccccccC
Q 006031 211 TGAITVT-STLSRFGISSFLFN 231 (664)
Q Consensus 211 ~g~~p~~-~~l~~~~~~~~~~N 231 (664)
++.+|.. ..+.++..+.+.+|
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECS
T ss_pred cccChhhhhccccCceEecccC
Confidence 9987732 33444444445444
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=2.7e-17 Score=168.44 Aligned_cols=152 Identities=22% Similarity=0.207 Sum_probs=130.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc-CCCCCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF-FTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L 157 (664)
..++.|+|+++.+.+ +++..+.++++|++|+|++|.+++..| .|.++++|++|+|++|. +++..|..+.++++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 468899999999988 566689999999999999999998876 68899999999999997 776668889999999999
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCC
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~ 232 (664)
+|++|++++..|..+..+++|++|+|++|++++.++.. .+++|+.|+|++|++++..+. ...+.++..+.+.+|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 99999999888888999999999999999999776652 688999999999999987763 4556677777777774
No 280
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.73 E-value=1.3e-17 Score=181.78 Aligned_cols=158 Identities=23% Similarity=0.204 Sum_probs=119.2
Q ss_pred ccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc
Q 006031 72 WQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 72 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~ 139 (664)
|..|.|.. ..++.|+|++|.+.+ +++..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCE-ECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCe-eCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 56778854 357789999999988 556689999999999999999988776 58889999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccCCcccccCCC
Q 006031 140 FTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 140 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~N~l~g~~p~ 216 (664)
|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|+..+.+|.. .+++|+.|+|++|+|+. +|.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~ 202 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN 202 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc
Confidence 98555567888999999999999988666667777888888888775544455442 56677777777777763 344
Q ss_pred CCcccccCccccccC
Q 006031 217 TSTLSRFGISSFLFN 231 (664)
Q Consensus 217 ~~~l~~~~~~~~~~N 231 (664)
...+.++..+.+.+|
T Consensus 203 ~~~l~~L~~L~Ls~N 217 (440)
T 3zyj_A 203 LTPLIKLDELDLSGN 217 (440)
T ss_dssp CTTCSSCCEEECTTS
T ss_pred cCCCcccCEEECCCC
Confidence 555556666666665
No 281
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.73 E-value=2.9e-17 Score=168.78 Aligned_cols=150 Identities=25% Similarity=0.224 Sum_probs=132.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..++.|+|++|.+++ +++..+.++++|++|+|++|+|++..+ .+.+++|++|+|++|+|+ .+|..+.++++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCc-cCHHHhhcCCCCCEEECCCCccCcccC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 468899999999988 556689999999999999999997655 488999999999999999 89999999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC-CcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT-STLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~-~~l~~~~~~~~~~N~ 232 (664)
++|+|++..|..|..+++|+.|+|++|++++.++.. .+++|+.|+|++|+|++.++.. ..+.++..+.+.+|.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 183 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCc
Confidence 999999777788999999999999999999776653 6789999999999999877643 456777788888774
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.72 E-value=1.4e-17 Score=182.21 Aligned_cols=149 Identities=23% Similarity=0.261 Sum_probs=132.1
Q ss_pred CCCccccc--eEecC----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--CCCCCCCCCE
Q 006031 67 LHFCQWQG--VICYQ----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--DLSGLVNLKS 132 (664)
Q Consensus 67 ~~~C~w~g--v~C~~----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~~~l~~L~~ 132 (664)
...|.|.+ |.|+. .+++.|+|++|.+.+ ++|..++++++|++|+|++|.+.+.+| .|.++++|++
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCCE
Confidence 34577666 88865 358999999999998 556689999999999999999988775 5999999999
Q ss_pred EeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchh--hcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccC
Q 006031 133 LFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKE--LASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSG 207 (664)
Q Consensus 133 L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~ 207 (664)
|+|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|+.|+|++|++++..|.. .+++|++|++++
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 999999999889999999999999999999999877776 999999999999999999988863 789999999999
Q ss_pred CcccccCCC
Q 006031 208 NNFTGAITV 216 (664)
Q Consensus 208 N~l~g~~p~ 216 (664)
|++++..|.
T Consensus 164 n~l~~~~~~ 172 (455)
T 3v47_A 164 NKVKSICEE 172 (455)
T ss_dssp CCBSCCCTT
T ss_pred CcccccChh
Confidence 999998873
No 283
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.72 E-value=3e-17 Score=167.24 Aligned_cols=157 Identities=18% Similarity=0.194 Sum_probs=97.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.+ +++..+.++++|++|+|++|.+++..| .|.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 356666666666665 334456666666666666666666554 355666666666666666654444566666666666
Q ss_pred ccCCcCcC-CCchhhcCCCCCCeeeCcCCcCccCCC----------------------------CC-CCCCCcEEEccCC
Q 006031 159 LSYNNLSG-PLPKELASQGRLYSLRLDVNRFNGSIP----------------------------PL-NQSSLKIFNVSGN 208 (664)
Q Consensus 159 l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p----------------------------~~-~~~~L~~l~l~~N 208 (664)
|++|++++ .+|..+..+++|+.|+|++|++++..+ .. ...+|+.|+|++|
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 66666654 246666666666666666666554432 21 2336888888888
Q ss_pred cccccCCCC-CcccccCccccccCCCCCCc
Q 006031 209 NFTGAITVT-STLSRFGISSFLFNPSLCGE 237 (664)
Q Consensus 209 ~l~g~~p~~-~~l~~~~~~~~~~N~~lcg~ 237 (664)
+|++.++.. ..+.++..+.+.+|++.|..
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred ceeecCHhHhcccccccEEEccCCcccccC
Confidence 888776643 45667777888888888753
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=197.22 Aligned_cols=136 Identities=22% Similarity=0.254 Sum_probs=121.0
Q ss_pred ccCCCCCCEEEecCCCCCCCCCC--CCCCCCCCEEeccCCcCC-----CCCcccccCCCCCCEEeccCCcCcCCCchhhc
Q 006031 101 LTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFT-----GSFPPSLLSLHRLKTLDLSYNNLSGPLPKELA 173 (664)
Q Consensus 101 l~~l~~L~~L~L~~N~l~g~~p~--~~~l~~L~~L~L~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 173 (664)
+.++++|+.|+|++|+|++..+. +..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..+.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 45789999999999999987663 667899999999999997 45567789999999999999999998899999
Q ss_pred CCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCCcc
Q 006031 174 SQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCGEI 238 (664)
Q Consensus 174 ~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg~~ 238 (664)
.+++|+.|+|++|+|++.+|....++|+.|||++|+|++.+| ..+.++..+.+.+||+.|...
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP--DVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS--CCCSSCCEEEEEEECCCCSSS
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh--hHhCCcCEEEecCCCcccccc
Confidence 999999999999999988777655899999999999999999 557788899999999999644
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.71 E-value=3.8e-17 Score=170.97 Aligned_cols=150 Identities=17% Similarity=0.222 Sum_probs=96.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccC---------
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLS--------- 150 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~--------- 150 (664)
..+..|+|++|.+. .+| ..+++|++|++|+|++|+|+..++.++++++|++|+|++|++.|.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp-~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELP-DTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCC-SCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chh-HHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 45677777777777 343 3677777777777777777733235667777777777777777677766554
Q ss_pred CCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccCCC-CCcccccCcccc
Q 006031 151 LHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSF 228 (664)
Q Consensus 151 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~ 228 (664)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|++.+.+|. ...+.++..+.+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 667777777777776 66666666777777777777776544332 456666666666666666653 233445555555
Q ss_pred ccCC
Q 006031 229 LFNP 232 (664)
Q Consensus 229 ~~N~ 232 (664)
.+|.
T Consensus 261 ~~n~ 264 (328)
T 4fcg_A 261 KDCS 264 (328)
T ss_dssp TTCT
T ss_pred CCCC
Confidence 5553
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=6.7e-17 Score=164.38 Aligned_cols=136 Identities=25% Similarity=0.270 Sum_probs=124.1
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+++ +++..+.++++|++|+|++|++++.+|. |.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 579999999999998 5666789999999999999999988885 78999999999999999977777789999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~ 216 (664)
|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|.+++..|.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9999999877778899999999999999999887753 789999999999999998874
No 287
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=8.1e-17 Score=161.71 Aligned_cols=135 Identities=23% Similarity=0.269 Sum_probs=121.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..++.|+|++|.+.+ +++..+.++++|++|+|++|+|++.+|. |.++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 59 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCc-cCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 579999999999998 5566899999999999999999988874 78999999999999999966666689999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p 215 (664)
|++|+|++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|.+++...
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 9999999777778999999999999999999877743 67899999999999998754
No 288
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=3.6e-17 Score=155.05 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=112.5
Q ss_pred CccccceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCccc
Q 006031 69 FCQWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPS 147 (664)
Q Consensus 69 ~C~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~ 147 (664)
.|+|++|.|+. +++.. +|. .+ .++|+.|+|++|++++.++. |.++++|++|+|++|++++..|..
T Consensus 6 ~C~~~~l~~~~----------~~l~~-~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 6 SCSGTEIRCNS----------KGLTS-VPT-GI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EEETTEEECCS----------SCCSS-CCT-TC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred EeCCCEEEecC----------CCCcc-CCC-CC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 37899988865 34444 332 23 36899999999999987774 789999999999999999666667
Q ss_pred ccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC
Q 006031 148 LLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 148 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~ 216 (664)
+.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|.+++..|.
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 899999999999999999777777899999999999999999766643 588999999999999998763
No 289
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.7e-17 Score=175.45 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=132.4
Q ss_pred CCCccccceEecC-------------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCE
Q 006031 67 LHFCQWQGVICYQ-------------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKS 132 (664)
Q Consensus 67 ~~~C~w~gv~C~~-------------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~ 132 (664)
..+|.|.|+ |+- ..++.|+|++|++.+ +++..+.++++|++|+|++|++++..| .|.++++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 567999988 752 368899999999998 566689999999999999999999877 4899999999
Q ss_pred EeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCch--hhcCCCCCCeeeCcCCc-CccCCCCC--CCCCCcEEEccC
Q 006031 133 LFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPK--ELASQGRLYSLRLDVNR-FNGSIPPL--NQSSLKIFNVSG 207 (664)
Q Consensus 133 L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~-l~g~~p~~--~~~~L~~l~l~~ 207 (664)
|+|++|++++..+..+.++++|++|+|++|+++ .+|. .+..+++|+.|++++|+ +++..|.. .+++|+.|++++
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 999999999544445899999999999999999 5665 78899999999999995 66554442 678999999999
Q ss_pred CcccccCCC-CCcccccCccccccCC
Q 006031 208 NNFTGAITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 208 N~l~g~~p~-~~~l~~~~~~~~~~N~ 232 (664)
|++++.+|. ...+.++..+.+.+|.
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CCcCccCHHHHhccccCCeecCCCCc
Confidence 999998763 2445555666666663
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=2e-16 Score=154.06 Aligned_cols=151 Identities=20% Similarity=0.157 Sum_probs=128.6
Q ss_pred EEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccC
Q 006031 83 VRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161 (664)
Q Consensus 83 ~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 161 (664)
+.+++.++++.. ++. .+ .++|++|+|++|++++.++. |.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 10 ~~v~c~~~~l~~-~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPT-GI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSS-CCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccC-CCC-CC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 578888998887 432 33 56999999999999987774 78999999999999999966566678999999999999
Q ss_pred CcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCCCCCCc
Q 006031 162 NNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPSLCGE 237 (664)
Q Consensus 162 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~lcg~ 237 (664)
|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|++++.++. ...+.++..+.+.+|++.|..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999766667899999999999999999877753 689999999999999987774 355778888999999888753
No 291
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=4.4e-17 Score=157.33 Aligned_cols=148 Identities=18% Similarity=0.219 Sum_probs=127.8
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.+++.|+|+++.+.. ++ .+..+++|++|+|++|.++ .++.+.++++|++|+|++|++++..|..+.++++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~l~~n~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT--GIEYAHNIKDLTINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT--TGGGCTTCSEEEEESCCCS-CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH--HHhcCCCCCEEEccCCCCC-cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 468899999999985 43 6999999999999999776 3457899999999999999999889999999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|++++..|..+..+++|+.|+|++|++.+.+|.. .+++|+.|++++|++++.. ....+.++..+.+.+|+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC-
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcc
Confidence 999999989999999999999999999844455543 7889999999999999843 55667778888888875
No 292
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.70 E-value=4.4e-17 Score=165.97 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=121.7
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.++.|+|++|.+.+ +++..+.++++|++|+|++|++++..+ .|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 29 ~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 58999999999998 556689999999999999999998877 6899999999999999999888889999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccC-CCCC--CCCCCcEEEccCCcccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGS-IPPL--NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~--~~~~L~~l~l~~N~l~g~~p 215 (664)
++|++++..+..+..+++|+.|+|++|++++. +|.. .+++|+.|++++|++++..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99999987777899999999999999999873 5653 77899999999999998765
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.70 E-value=2.1e-17 Score=170.99 Aligned_cols=161 Identities=22% Similarity=0.280 Sum_probs=103.7
Q ss_pred CccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCC---CCCCCCCCCCCEEe
Q 006031 69 FCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGP---IPDLSGLVNLKSLF 134 (664)
Q Consensus 69 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~---~p~~~~l~~L~~L~ 134 (664)
.|.|++|.|+. ..++.|+|++|.+.. +++..+.++++|++|+|++|.++.. .+.+.++++|++|+
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCc-cCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 38999999975 368899999999996 6666689999999999999999843 22444566666666
Q ss_pred ccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCc-hhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCccc
Q 006031 135 LDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLP-KELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFT 211 (664)
Q Consensus 135 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~ 211 (664)
|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|.++
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 6666666 456556666666666666666664333 35556666666666666665555442 4455556666666555
Q ss_pred c-cCC-CCCcccccCccccccC
Q 006031 212 G-AIT-VTSTLSRFGISSFLFN 231 (664)
Q Consensus 212 g-~~p-~~~~l~~~~~~~~~~N 231 (664)
+ .+| ....+.++..+.+.+|
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTS
T ss_pred cccchhHHhhCcCCCEEECCCC
Confidence 4 223 1233344444444444
No 294
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.70 E-value=3.7e-17 Score=186.06 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=121.5
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.++.|+|++|.|++ +++.+|.+|++|++|+|++|+|++.+| .|.+|++|++|+|++|+|++..|..|.+|++|++|+|
T Consensus 53 ~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 68999999999998 677789999999999999999999888 5999999999999999999766678999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccC-CCCC--CCCCCcEEEccCCcccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGS-IPPL--NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~--~~~~L~~l~l~~N~l~g~~p 215 (664)
++|+|++..|..|+++++|+.|+|++|++++. +|.. .+++|++|++++|+|++..|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99999976667899999999999999999864 4543 68899999999999999877
No 295
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=8.8e-18 Score=194.02 Aligned_cols=174 Identities=21% Similarity=0.196 Sum_probs=114.3
Q ss_pred CChhHHHHHHHHHhccCCCCCC---cCcCCCCCCCccccceEecCCcEEEEEEcCCCCCC--------------------
Q 006031 38 LLPSDAQVLLAFKAKADLRNHL---FFSQNKSLHFCQWQGVICYQQKVVRVVLQGLDLGG-------------------- 94 (664)
Q Consensus 38 ~~~~~~~aLl~~k~~~~~~~~~---~~~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~g-------------------- 94 (664)
....++++|+++........+. .|.. ..+..+.|.+++++..++++|+|.++++..
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTG-DSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcC-CCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 4457889999998775322211 2322 224567899999988888887775554432
Q ss_pred ------cCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCC
Q 006031 95 ------IFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPL 168 (664)
Q Consensus 95 ------~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 168 (664)
.+++..+..++.|+.|+|++|.|....+.+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp --------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 12355688899999999999999955557889999999999999999 99999999999999999999999 89
Q ss_pred chhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCC
Q 006031 169 PKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 169 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p 215 (664)
|..|+.|++|++|+|++|.|+ .+|.. .+++|+.|+|++|+|+|.+|
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 999999999999999999997 66653 78899999999999999988
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=174.48 Aligned_cols=154 Identities=25% Similarity=0.242 Sum_probs=103.3
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--------------------------CCCCCCCCCEEe
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--------------------------DLSGLVNLKSLF 134 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--------------------------~~~~l~~L~~L~ 134 (664)
.+..|+|++|.|++ +++..+..+++|++|+|++|.|++..+ .|.++++|++|+
T Consensus 113 ~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 113 NLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SCCEEECCSSCCSS-CCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred cCCEEECCCCcCCe-eCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 45555555555554 334445555555555555555554332 133445555555
Q ss_pred ccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccc
Q 006031 135 LDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 135 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g 212 (664)
|++|+++ .+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|.. .+++|+.|+|++|+|++
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 5555555 444 3566667777777777777777777888888888888888888766653 67899999999999998
Q ss_pred cCCCC-CcccccCccccccCCCCCCc
Q 006031 213 AITVT-STLSRFGISSFLFNPSLCGE 237 (664)
Q Consensus 213 ~~p~~-~~l~~~~~~~~~~N~~lcg~ 237 (664)
..+.. ..+.++..+.+.+||+.|..
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred cChhHhccccCCCEEEcCCCCccCCC
Confidence 77643 45677888899999999864
No 297
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.69 E-value=6.2e-17 Score=183.77 Aligned_cols=136 Identities=19% Similarity=0.153 Sum_probs=124.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
.+++.|+|++|.+.+ +++..+.++++|++|+|++|++++.+| .|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 478999999999998 556689999999999999999999888 589999999999999999988899999999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc-CCCCC--CCCCCcEEEccCCcccccCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNG-SIPPL--NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~--~~~~L~~l~l~~N~l~g~~p~ 216 (664)
|++|++++..|..++.+++|++|+|++|++++ .+|.. .+++|+.|++++|++++..|.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99999998777889999999999999999986 56763 789999999999999998773
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=5.2e-17 Score=168.04 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=111.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCC-CCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTG-SFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L 157 (664)
..+..|+|++|.+.+..+...+.++++|++|+|++|.+++.+|. +.++++|+.|+|++|.+++ .+|..+.++++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 45566666666666632224677777777777777777776663 6677778888888887776 467777778888888
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC--CCCCCCcEEEccCCcccccCCCC-Ccc-cccCccccccCCC
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAITVT-STL-SRFGISSFLFNPS 233 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~~L~~l~l~~N~l~g~~p~~-~~l-~~~~~~~~~~N~~ 233 (664)
+|++|++++..|..+..+++|+.|+|++|++++..+. ..+++|+.|+|++|++++.+|.. ..+ .++..+.+.+|+.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 8888888777777777788888888888887765552 25677888888888888776632 223 3566677778877
Q ss_pred CCC
Q 006031 234 LCG 236 (664)
Q Consensus 234 lcg 236 (664)
-|.
T Consensus 261 ~~~ 263 (306)
T 2z66_A 261 ACT 263 (306)
T ss_dssp ECS
T ss_pred ecc
Confidence 664
No 299
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.69 E-value=5.1e-17 Score=181.40 Aligned_cols=147 Identities=23% Similarity=0.275 Sum_probs=122.6
Q ss_pred CCCCc-----cccce-EecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCc
Q 006031 66 SLHFC-----QWQGV-ICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 66 ~~~~C-----~w~gv-~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~ 139 (664)
+.++| .|.|+ .|..++++.|+|++|+|++ +|+ .+ +++|+.|+|++|+|+ .+| ..+++|++|+|++|+
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip--~~l~~L~~L~Ls~N~ 111 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP--ELPASLEYLDACDNR 111 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC--CCCTTCCEEECCSSC
T ss_pred cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc--cccCCCCEEEccCCC
Confidence 35678 79999 7988899999999999998 655 45 388999999999999 566 668999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCc
Q 006031 140 FTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTST 219 (664)
Q Consensus 140 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~ 219 (664)
|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|...
T Consensus 112 l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-lp~l~- 179 (571)
T 3cvr_A 112 LST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-LPELP- 179 (571)
T ss_dssp CSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCCCC-
T ss_pred CCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-cchhh-
Confidence 996 888 765 89999999999997 787 68899999999999997 665 67889999999999998 55422
Q ss_pred ccccCccccccCC
Q 006031 220 LSRFGISSFLFNP 232 (664)
Q Consensus 220 l~~~~~~~~~~N~ 232 (664)
.++..+.+.+|.
T Consensus 180 -~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 180 -ESLEALDVSTNL 191 (571)
T ss_dssp -TTCCEEECCSSC
T ss_pred -CCCCEEECcCCC
Confidence 566677777763
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=1.4e-16 Score=174.23 Aligned_cols=111 Identities=23% Similarity=0.205 Sum_probs=81.7
Q ss_pred CCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEE
Q 006031 126 GLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIF 203 (664)
Q Consensus 126 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l 203 (664)
++++|++|+|++|+++ .+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|.. .+++|+.|
T Consensus 194 ~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp TCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 3444444444444444 233 3555667777777788888777888888888888888888888777753 67899999
Q ss_pred EccCCcccccCCCC-CcccccCccccccCCCCCCcc
Q 006031 204 NVSGNNFTGAITVT-STLSRFGISSFLFNPSLCGEI 238 (664)
Q Consensus 204 ~l~~N~l~g~~p~~-~~l~~~~~~~~~~N~~lcg~~ 238 (664)
+|++|+|++.++.. ..+.++..+.+.+||+.|...
T Consensus 272 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 272 NLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999999877643 456778888999999988643
No 301
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.69 E-value=2.6e-17 Score=181.65 Aligned_cols=150 Identities=23% Similarity=0.137 Sum_probs=102.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-----------------CCCCCCCCEEeccCCcCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-----------------LSGLVNLKSLFLDHNFFTG 142 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-----------------~~~l~~L~~L~L~~N~l~g 142 (664)
..+..|+|++|.+++.. | ++.+++|++|+|++|.|++.++. ...+++|+.|+|++|.+++
T Consensus 58 ~~L~~L~Ls~N~l~~~~-~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETL-D--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEE-E--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCc-c--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 35556666666665532 1 55555555555555555443220 1124566677777777777
Q ss_pred CCcccccCCCCCCEEeccCCcCcCCCchhhc-CCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCccc
Q 006031 143 SFPPSLLSLHRLKTLDLSYNNLSGPLPKELA-SQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLS 221 (664)
Q Consensus 143 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~ 221 (664)
..|..++++++|++|+|++|+|++.+|..+. .+++|+.|+|++|+|++..+...+++|+.|+|++|+|++.+|....+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~ 214 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHhHcCCC
Confidence 7777778888888888888888877777775 678888888888888877665677888888888888888777655666
Q ss_pred ccCccccccCC
Q 006031 222 RFGISSFLFNP 232 (664)
Q Consensus 222 ~~~~~~~~~N~ 232 (664)
++..+.+.+|.
T Consensus 215 ~L~~L~Ls~N~ 225 (487)
T 3oja_A 215 GVTWISLRNNK 225 (487)
T ss_dssp TCSEEECTTSC
T ss_pred CccEEEecCCc
Confidence 67777777663
No 302
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.69 E-value=6.4e-17 Score=183.37 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=125.1
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.+..+++.++.+.. +|+..+.++++|++|+|++|.|++.+| .|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 45678888888877 667678899999999999999999887 7999999999999999999888888899999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
++|+|++..|..|..+++|++|+|++|++++.+|.. .+++|+.|+|++|.|++..+ ..+.++..+.+.+|
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n 202 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYN 202 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccC
Confidence 999999554555789999999999999999888753 78899999999999998643 55566666666555
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=4.2e-17 Score=185.13 Aligned_cols=158 Identities=17% Similarity=0.124 Sum_probs=115.3
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCC-CcccccCCCCCCEEe
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGS-FPPSLLSLHRLKTLD 158 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~ 158 (664)
.+..|+|++|.+.+..+...+.++++|++|+|++|.+++.+| .+.++++|+.|+|++|++++. +|..+.++++|++|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 455566666666654332467777777777777777777666 467778888888888888763 677778888888888
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCccc-ccCccccccCCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLS-RFGISSFLFNPSLC 235 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~-~~~~~~~~~N~~lc 235 (664)
|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+..++....+. ++..+.+.+|++.|
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCccc
Confidence 8888888777778888888888888888888776653 67788888888888885544434443 46777888999888
Q ss_pred Ccc
Q 006031 236 GEI 238 (664)
Q Consensus 236 g~~ 238 (664)
..+
T Consensus 560 ~c~ 562 (606)
T 3vq2_A 560 ICE 562 (606)
T ss_dssp SST
T ss_pred CCc
Confidence 644
No 304
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.68 E-value=2e-17 Score=188.80 Aligned_cols=134 Identities=16% Similarity=0.289 Sum_probs=119.8
Q ss_pred CccccCCCCCCEEEecCCCCCCC-----------------CC-CCC--CCCCCCEEeccCCcCCCCCcccccCCCCCCEE
Q 006031 98 PNSLTKLDQLRVLGLQNNSLTGP-----------------IP-DLS--GLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 98 p~~l~~l~~L~~L~L~~N~l~g~-----------------~p-~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 157 (664)
|.++++|++|++|+|++|+|+|. +| +++ ++++|++|+|++|++.|.+|..|+++++|++|
T Consensus 199 p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 278 (636)
T 4eco_A 199 SKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278 (636)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEE
T ss_pred CHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEE
Confidence 44799999999999999999994 55 788 99999999999999999999999999999999
Q ss_pred eccCCc-CcC-CCchhhcCC------CCCCeeeCcCCcCccCCCC----CCCCCCcEEEccCCcccccCCCCCcccccCc
Q 006031 158 DLSYNN-LSG-PLPKELASQ------GRLYSLRLDVNRFNGSIPP----LNQSSLKIFNVSGNNFTGAITVTSTLSRFGI 225 (664)
Q Consensus 158 ~l~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~g~~p~----~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~ 225 (664)
+|++|+ ++| .+|..++.+ ++|+.|+|++|+++ .+|. ..+++|+.|++++|+++|.+|....+.++..
T Consensus 279 ~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~ 357 (636)
T 4eco_A 279 NVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLAS 357 (636)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESE
T ss_pred ECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCE
Confidence 999998 999 899999887 99999999999999 7776 3888999999999999999996666777777
Q ss_pred cccccCC
Q 006031 226 SSFLFNP 232 (664)
Q Consensus 226 ~~~~~N~ 232 (664)
+.+.+|.
T Consensus 358 L~L~~N~ 364 (636)
T 4eco_A 358 LNLAYNQ 364 (636)
T ss_dssp EECCSSE
T ss_pred EECCCCc
Confidence 7777773
No 305
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.68 E-value=7.3e-17 Score=167.37 Aligned_cols=148 Identities=18% Similarity=0.195 Sum_probs=75.4
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCC---CCC--CCCCCCCCEEeccCCcCCCCCcc----cccCC
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGP---IPD--LSGLVNLKSLFLDHNFFTGSFPP----SLLSL 151 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~---~p~--~~~l~~L~~L~L~~N~l~g~~p~----~~~~l 151 (664)
++..|+|++|.+.+ +++..++++++|++|+|++|++.+. .+. ++++++|++|+|++|+++ .+|. .+.++
T Consensus 146 ~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 146 GLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp CCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred CCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 45555555555544 3334555555555555555555441 111 244555555555555554 2222 13445
Q ss_pred CCCCEEeccCCcCcCCCchhhcCC---CCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCcccc
Q 006031 152 HRLKTLDLSYNNLSGPLPKELASQ---GRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSF 228 (664)
Q Consensus 152 ~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~ 228 (664)
++|++|||++|+|++.+|..+..+ ++|++|+|++|+|+ .+|....++|+.|+|++|+|++. |....+.++..+.+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L 301 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRA-PQPDELPEVDNLTL 301 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSC-CCTTSCCCCSCEEC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCC-chhhhCCCccEEEC
Confidence 555555555555555555555444 35555555555555 34443335555666666665553 22244455555555
Q ss_pred ccCC
Q 006031 229 LFNP 232 (664)
Q Consensus 229 ~~N~ 232 (664)
.+|+
T Consensus 302 ~~N~ 305 (310)
T 4glp_A 302 DGNP 305 (310)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 5553
No 306
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=175.98 Aligned_cols=160 Identities=20% Similarity=0.156 Sum_probs=134.9
Q ss_pred ccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc
Q 006031 72 WQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 72 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~ 139 (664)
|..|.|+. ..++.|+|++|.+.+ +++..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 78899964 367889999999998 556689999999999999999999877 69999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-
Q 006031 140 FTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV- 216 (664)
Q Consensus 140 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~- 216 (664)
+++..+..|.++++|++|+|++|++++..|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99555556899999999999999999988999999999999999999999877753 778999999999999876542
Q ss_pred CCcccccCccccccCC
Q 006031 217 TSTLSRFGISSFLFNP 232 (664)
Q Consensus 217 ~~~l~~~~~~~~~~N~ 232 (664)
...+.++..+.+.+|.
T Consensus 172 l~~l~~L~~L~l~~n~ 187 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLN 187 (477)
T ss_dssp HTTCTTCCEEEEESCC
T ss_pred hcccCCCcEEeCCCCc
Confidence 2345556666666653
No 307
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.6e-16 Score=149.20 Aligned_cols=133 Identities=23% Similarity=0.137 Sum_probs=117.2
Q ss_pred CcEEEEEEcCCCCC-CcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLG-GIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~-g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..++.|+|++|.+. |.++. .+..+++|++|+|++|.+++. +.+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 66654 689999999999999999987 8899999999999999999988898888899999999
Q ss_pred ccCCcCcCC-CchhhcCCCCCCeeeCcCCcCccCCC----C-CCCCCCcEEEccCCcccccC
Q 006031 159 LSYNNLSGP-LPKELASQGRLYSLRLDVNRFNGSIP----P-LNQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 159 l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p----~-~~~~~L~~l~l~~N~l~g~~ 214 (664)
|++|++++. .+..+..+++|+.|+|++|++++.++ . ..+++|++|++++|.++...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 999999953 22789999999999999999998776 2 37889999999999987654
No 308
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.67 E-value=1.4e-16 Score=158.71 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=127.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCC-CCCCCC-CCCCCCCCCEEeccC-CcCCCCCcccccCCCCCCE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNS-LTGPIP-DLSGLVNLKSLFLDH-NFFTGSFPPSLLSLHRLKT 156 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~-l~g~~p-~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~ 156 (664)
..++.|+|++|.+++ +++..+.++++|++|+|++|+ +++..+ .|.++++|++|+|++ |++++..|..|.++++|++
T Consensus 31 ~~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 478999999999998 566689999999999999997 887776 688999999999999 9999666678999999999
Q ss_pred EeccCCcCcCCCchhhcCCCCCC---eeeCcCC-cCccCCCCC--CCCCCc-EEEccCCcccccCCCCCcccccCccccc
Q 006031 157 LDLSYNNLSGPLPKELASQGRLY---SLRLDVN-RFNGSIPPL--NQSSLK-IFNVSGNNFTGAITVTSTLSRFGISSFL 229 (664)
Q Consensus 157 L~l~~N~l~g~~p~~~~~l~~L~---~L~l~~N-~l~g~~p~~--~~~~L~-~l~l~~N~l~g~~p~~~~l~~~~~~~~~ 229 (664)
|+|++|++++ +|. +..+++|+ .|++++| ++++..+.. .+++|+ .|++++|+++...+......++..+.+.
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcC
Confidence 9999999996 887 88888888 9999999 998766642 688999 9999999999544433333566677777
Q ss_pred cCCCC
Q 006031 230 FNPSL 234 (664)
Q Consensus 230 ~N~~l 234 (664)
+|+.+
T Consensus 188 ~n~~l 192 (239)
T 2xwt_C 188 KNKYL 192 (239)
T ss_dssp TCTTC
T ss_pred CCCCc
Confidence 77534
No 309
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=1.1e-16 Score=174.93 Aligned_cols=134 Identities=18% Similarity=0.156 Sum_probs=119.0
Q ss_pred CCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeC
Q 006031 105 DQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRL 183 (664)
Q Consensus 105 ~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 183 (664)
++|+.|+|++|++++.+| .++++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 589999999999999888 4889999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC-CcccccCccccccCCCCCCcc
Q 006031 184 DVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT-STLSRFGISSFLFNPSLCGEI 238 (664)
Q Consensus 184 ~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~-~~l~~~~~~~~~~N~~lcg~~ 238 (664)
++|++++.+|.. .+++|++|+|++|+|++.++.. ..+.++..+.+.+|+..|..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999887763 7889999999999999877643 567788888999999888643
No 310
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=9.9e-17 Score=147.37 Aligned_cols=126 Identities=22% Similarity=0.166 Sum_probs=106.2
Q ss_pred CcEEEEEEcCCCCC-CcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLG-GIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~-g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
.+++.|+|++|.+. +.+++ .+..+++|+.|+|++|++++. +.+.++++|++|+|++|++++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46888999999998 66654 788999999999999999887 7788899999999999999987888888899999999
Q ss_pred ccCCcCcCC-CchhhcCCCCCCeeeCcCCcCccCCC---C--CCCCCCcEEEccC
Q 006031 159 LSYNNLSGP-LPKELASQGRLYSLRLDVNRFNGSIP---P--LNQSSLKIFNVSG 207 (664)
Q Consensus 159 l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p---~--~~~~~L~~l~l~~ 207 (664)
|++|++++. .|..+..+++|+.|++++|++++.++ . ..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999863 45788899999999999999987766 1 2678888888764
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.66 E-value=8.4e-17 Score=167.10 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=118.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCC-----CCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCC--Ccccc--c
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKL-----DQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGS--FPPSL--L 149 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l-----~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~--~p~~~--~ 149 (664)
..++.|+|++|.+++. |..++.+ ++|++|+|++|++++.+| .|+++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~--~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR--DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS--SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch--hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 5789999999999985 4577776 899999999999998886 688999999999999998876 45555 8
Q ss_pred CCCCCCEEeccCCcCcC--CCch-hhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccCCcccccCCCCCccccc
Q 006031 150 SLHRLKTLDLSYNNLSG--PLPK-ELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSGNNFTGAITVTSTLSRF 223 (664)
Q Consensus 150 ~l~~L~~L~l~~N~l~g--~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~N~l~g~~p~~~~l~~~ 223 (664)
++++|++|+|++|+|++ .+|. .+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..-. .++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCc
Confidence 89999999999999983 3333 3467889999999999999877532 4688999999999998 5553222 566
Q ss_pred CccccccCC
Q 006031 224 GISSFLFNP 232 (664)
Q Consensus 224 ~~~~~~~N~ 232 (664)
..+.+.+|.
T Consensus 277 ~~L~Ls~N~ 285 (312)
T 1wwl_A 277 SVLDLSYNR 285 (312)
T ss_dssp EEEECCSSC
T ss_pred eEEECCCCC
Confidence 667777763
No 312
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.65 E-value=3.3e-16 Score=167.87 Aligned_cols=148 Identities=18% Similarity=0.217 Sum_probs=126.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..+++.++.+.. +++..+.++++|++|+|++|++++..| .|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 356778899988877 666568899999999999999998887 799999999999999999988888899999999999
Q ss_pred ccCCcCcCCCchh-hcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 159 LSYNNLSGPLPKE-LASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 159 l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
|++|+++ .+|.. +..+++|++|+|++|++++..|.. .+++|+.|++++|++++... ..+.++..+.+.+|
T Consensus 124 L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYN 196 (390)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSS
T ss_pred CCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccc--ccccccceeecccc
Confidence 9999999 56655 689999999999999999877753 78899999999999998632 55666666666665
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.65 E-value=2.3e-16 Score=179.09 Aligned_cols=159 Identities=18% Similarity=0.102 Sum_probs=134.9
Q ss_pred ccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc
Q 006031 72 WQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 72 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~ 139 (664)
+.-|.|+. ..++.|+|++|.+++ ++|..|+++++|++|+|++|++++..| .|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 45677853 468999999999998 567799999999999999999999887 59999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccC-CCC-CCCCCCcEEEccCCcccccCCC-
Q 006031 140 FTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGS-IPP-LNQSSLKIFNVSGNNFTGAITV- 216 (664)
Q Consensus 140 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~-~~~~~L~~l~l~~N~l~g~~p~- 216 (664)
+++..|..|+++++|++|+|++|++++..|..+..+++|++|+|++|++++. +|. ..+++|+.|++++|++++..|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9999999999999999999999999977688899999999999999999984 354 3688999999999999987662
Q ss_pred CCcccccC--ccccccC
Q 006031 217 TSTLSRFG--ISSFLFN 231 (664)
Q Consensus 217 ~~~l~~~~--~~~~~~N 231 (664)
...+.++. .+.+.+|
T Consensus 173 ~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGN 189 (606)
T ss_dssp HHTTTTCCSEEEECTTC
T ss_pred hhhhcccceeEEecCCC
Confidence 12334444 3445555
No 314
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.4e-16 Score=150.61 Aligned_cols=126 Identities=22% Similarity=0.176 Sum_probs=106.6
Q ss_pred EEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcC
Q 006031 85 VVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNL 164 (664)
Q Consensus 85 l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 164 (664)
+++++++|.. +|. .+. ++|++|+|++|+|+..++.|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~~-ip~-~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLKV-LPK-GIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCSS-CCS-CCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCCc-CCC-CCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 4445666665 443 443 689999999999995555799999999999999999987788899999999999999999
Q ss_pred cCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccC
Q 006031 165 SGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 165 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~ 214 (664)
++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|.+...-
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9888889999999999999999999766642 6789999999999998643
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=9.4e-17 Score=177.18 Aligned_cols=153 Identities=16% Similarity=0.109 Sum_probs=130.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCccccc-CCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLL-SLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L 157 (664)
..+..|+|++|.+++. ++ ..+++|+.|+|++|+|++.+| .++++++|+.|+|++|.|++.+|..+. ++++|++|
T Consensus 99 ~~L~~L~L~~N~l~~~-~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRV-SC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCE-EE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCC-Cc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 4566777777777773 22 346889999999999999887 688999999999999999999999887 79999999
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCC
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCG 236 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg 236 (664)
+|++|+|++. |. +..+++|+.|+|++|+|++.+|.+ .+++|+.|+|++|+|++.++....+.++..+.+.+|+..|+
T Consensus 175 ~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 175 NLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp ECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 9999999965 43 446999999999999999977764 67899999999999999766666778888899999999887
Q ss_pred cc
Q 006031 237 EI 238 (664)
Q Consensus 237 ~~ 238 (664)
.+
T Consensus 253 ~~ 254 (487)
T 3oja_A 253 TL 254 (487)
T ss_dssp HH
T ss_pred ch
Confidence 43
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.65 E-value=7.2e-17 Score=167.60 Aligned_cols=152 Identities=22% Similarity=0.194 Sum_probs=124.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccc--cCCCCCCEEEecCCCCCCCCCCCCCC-----CCCCEEeccCCcCCCCCcccccCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSL--TKLDQLRVLGLQNNSLTGPIPDLSGL-----VNLKSLFLDHNFFTGSFPPSLLSLH 152 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l--~~l~~L~~L~L~~N~l~g~~p~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~ 152 (664)
.++..|+|++|.++|.++. .+ ..+++|++|+|++|+|++.++.++++ ++|++|+|++|++++..|..|++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPP-PLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCC-CSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHH-HHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 4788999999999987755 44 89999999999999999984445555 8999999999999988889999999
Q ss_pred CCCEEeccCCcCcCC--Cchhh--cCCCCCCeeeCcCCcCccC--CCC---CCCCCCcEEEccCCcccccCC--CCCccc
Q 006031 153 RLKTLDLSYNNLSGP--LPKEL--ASQGRLYSLRLDVNRFNGS--IPP---LNQSSLKIFNVSGNNFTGAIT--VTSTLS 221 (664)
Q Consensus 153 ~L~~L~l~~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~g~--~p~---~~~~~L~~l~l~~N~l~g~~p--~~~~l~ 221 (664)
+|++|+|++|+++|. +|..+ ..+++|+.|+|++|++++. ++. ..+++|+.|+|++|++++.+| ....+.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999999876 45555 8899999999999999842 222 166899999999999999774 334467
Q ss_pred ccCccccccCC
Q 006031 222 RFGISSFLFNP 232 (664)
Q Consensus 222 ~~~~~~~~~N~ 232 (664)
++..+.+.+|.
T Consensus 254 ~L~~L~Ls~N~ 264 (312)
T 1wwl_A 254 QLNSLNLSFTG 264 (312)
T ss_dssp TCCEEECTTSC
T ss_pred CCCEEECCCCc
Confidence 77778887774
No 317
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.65 E-value=1.1e-15 Score=159.71 Aligned_cols=158 Identities=18% Similarity=0.236 Sum_probs=118.5
Q ss_pred CCccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEec
Q 006031 68 HFCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFL 135 (664)
Q Consensus 68 ~~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L 135 (664)
..|.|+.+.|+. ..++.|+|++|.+++ +++..+.++++|++|+|++|++++..| .|.++++|++|+|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 347899999974 357889999999998 556689999999999999999999877 6999999999999
Q ss_pred cCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc--CCCCC--CCCCCcEEEccCCccc
Q 006031 136 DHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNG--SIPPL--NQSSLKIFNVSGNNFT 211 (664)
Q Consensus 136 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~--~~~~L~~l~l~~N~l~ 211 (664)
++|+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+|++|+++. ..+.. .+++|+.|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999998 7887765 678888888888887666677777788888887777753 33322 4566666666666666
Q ss_pred ccCCCCCcccccCccccccC
Q 006031 212 GAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 212 g~~p~~~~l~~~~~~~~~~N 231 (664)
.... ....++..+.+.+|
T Consensus 185 ~l~~--~~~~~L~~L~l~~n 202 (330)
T 1xku_A 185 TIPQ--GLPPSLTELHLDGN 202 (330)
T ss_dssp SCCS--SCCTTCSEEECTTS
T ss_pred cCCc--cccccCCEEECCCC
Confidence 5332 11234444444444
No 318
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.65 E-value=3.8e-16 Score=184.15 Aligned_cols=161 Identities=22% Similarity=0.196 Sum_probs=136.3
Q ss_pred ccccceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCC-C-CCCCCCCCCEEeccCCcCCCCCccc
Q 006031 70 CQWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPI-P-DLSGLVNLKSLFLDHNFFTGSFPPS 147 (664)
Q Consensus 70 C~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~-p-~~~~l~~L~~L~L~~N~l~g~~p~~ 147 (664)
|.|..|-+-..+++.|+|++|.+++ +.+.++.+|++|++|+|++|++.+.+ | .|.+|++|++|+|++|++++..|..
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~-i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCE-ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCc-cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 5688887755789999999999998 45668999999999999999887777 4 5999999999999999999889999
Q ss_pred ccCCCCCCEEeccCCcCcCCCchh--hcCCCCCCeeeCcCCcCccCCCC---CCCCCCcEEEccCCcccccCCCC-Ccc-
Q 006031 148 LLSLHRLKTLDLSYNNLSGPLPKE--LASQGRLYSLRLDVNRFNGSIPP---LNQSSLKIFNVSGNNFTGAITVT-STL- 220 (664)
Q Consensus 148 ~~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~l~~N~l~g~~p~~-~~l- 220 (664)
|.++++|++|+|++|++++.+|.. +.++++|+.|+|++|++++..|. ..+++|+.|+|++|++++..|.. ..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 999999999999999999888876 89999999999999999987764 37899999999999999877632 112
Q ss_pred -cccCccccccC
Q 006031 221 -SRFGISSFLFN 231 (664)
Q Consensus 221 -~~~~~~~~~~N 231 (664)
.++..+.+.+|
T Consensus 173 ~~~L~~L~L~~n 184 (844)
T 3j0a_A 173 GKTLSFFSLAAN 184 (844)
T ss_dssp HCSSCCCEECCS
T ss_pred CCccceEECCCC
Confidence 34555555555
No 319
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.64 E-value=2.7e-16 Score=178.41 Aligned_cols=134 Identities=20% Similarity=0.177 Sum_probs=70.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC--CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 157 (664)
..+..|+|++|.+.+. +|..+.++++|+.|+|++|.+++.+|. +.++++|+.|+|++|.+++..|..+.++++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSL-KTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEE-CTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcC-CHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 3566666666666552 344555666666666666666555441 5555555555555555555555555555555555
Q ss_pred eccCCcCcCC---CchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccC
Q 006031 158 DLSYNNLSGP---LPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 158 ~l~~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~ 214 (664)
+|++|++++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSS 516 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGG
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCC
Confidence 5555555541 2234455555555555555555444432 3444444444444444443
No 320
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.64 E-value=1.1e-15 Score=171.95 Aligned_cols=155 Identities=21% Similarity=0.173 Sum_probs=132.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCC--C-CCCCCCCCCEEeccCCcCCCCCccc-ccCCCCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPI--P-DLSGLVNLKSLFLDHNFFTGSFPPS-LLSLHRLK 155 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~--p-~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~ 155 (664)
..++.|+|++|.+++.+ |..++++++|+.|+|++|++++.. | .+.++++|+.|+|++|++++.+|.. +..+++|+
T Consensus 353 ~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSV-FQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTT-TTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccch-hhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 57899999999999855 458999999999999999999754 3 5889999999999999999878775 78899999
Q ss_pred EEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC--CCCCCCcEEEccCCcccccCCC-CCcccccCccccccCC
Q 006031 156 TLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 156 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~ 232 (664)
+|+|++|++++.+|..+. ++|+.|+|++|+++ .+|. ..+++|+.|+|++|+|++.++. ...+.++..+.+.+|+
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 999999999988887665 79999999999999 5654 3788999999999999965554 4667788889999999
Q ss_pred CCCCcc
Q 006031 233 SLCGEI 238 (664)
Q Consensus 233 ~lcg~~ 238 (664)
+.|..+
T Consensus 509 ~~c~c~ 514 (562)
T 3a79_B 509 WDCTCP 514 (562)
T ss_dssp BCCCHH
T ss_pred cCCCcc
Confidence 998643
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.64 E-value=5.2e-16 Score=178.62 Aligned_cols=151 Identities=19% Similarity=0.167 Sum_probs=124.8
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
.+++.|+|++|.+.+ +++..+.++++|++|+|++|++++.+|. |+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 478899999999998 5666799999999999999999998885 78899999999999999944444689999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC---CcccccCccccccC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT---STLSRFGISSFLFN 231 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~---~~l~~~~~~~~~~N 231 (664)
|++|++++..|..++.+++|++|+|++|++++.+|.. .+++|+.|++++|++++..+.. ....++..+.+.+|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 9999998777788999999999999999999887764 7889999999999998876631 12245666666666
No 322
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=7.5e-16 Score=158.23 Aligned_cols=145 Identities=25% Similarity=0.370 Sum_probs=121.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..++.|+|++|.+.+ +++ +.++++|++|+|++|.+++ +|.+.++++|++|+|++|++++ + +.+.++++|++|+|
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 578899999999988 333 8899999999999999987 5668899999999999999985 4 46888999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPS 233 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~ 233 (664)
++|++++. ..+..+++|+.|+|++|++++..|-..+++|+.|+|++|++++. |....+.++..+.+.+|+.
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEE
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcc
Confidence 99999864 57889999999999999999877756888999999999999874 4456677777788888754
No 323
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=5.5e-16 Score=172.56 Aligned_cols=154 Identities=21% Similarity=0.204 Sum_probs=112.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCC--CCC-CCCCCCCCCEEeccCCcCCCCCccc-ccCCCCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTG--PIP-DLSGLVNLKSLFLDHNFFTGSFPPS-LLSLHRLK 155 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g--~~p-~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~ 155 (664)
..++.|+|++|.+++.+ |..++++++|+.|+|++|++++ .+| .+.++++|++|+|++|++++.+|.. +..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTV-FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTT-TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhh-hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 46777778888777754 3467778888888888888776 333 4677788888888888887767765 66777888
Q ss_pred EEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC--CCCCCCcEEEccCCcccccCCC-CCcccccCccccccCC
Q 006031 156 TLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 156 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~ 232 (664)
+|+|++|++++.+|..+. ++|+.|+|++|+++ .+|. ..+++|+.|+|++|+|++..+. ...+.++..+.+.+|+
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 888888888777776654 67888888888887 5554 2677888888888888854443 3456677778888888
Q ss_pred CCCCc
Q 006031 233 SLCGE 237 (664)
Q Consensus 233 ~lcg~ 237 (664)
..|..
T Consensus 480 ~~c~c 484 (520)
T 2z7x_B 480 WDCSC 484 (520)
T ss_dssp BCCCH
T ss_pred CcccC
Confidence 87753
No 324
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.63 E-value=1.4e-15 Score=159.19 Aligned_cols=157 Identities=19% Similarity=0.268 Sum_probs=127.6
Q ss_pred CccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEecc
Q 006031 69 FCQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLD 136 (664)
Q Consensus 69 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~ 136 (664)
.|.|+.+.|+. ..++.|+|++|.+.+ +++..+.++++|++|+|++|++++..| .|.++++|++|+|+
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 37899999964 367899999999987 556689999999999999999999877 58999999999999
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc--CCCCC-CCCCCcEEEccCCccccc
Q 006031 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNG--SIPPL-NQSSLKIFNVSGNNFTGA 213 (664)
Q Consensus 137 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~-~~~~L~~l~l~~N~l~g~ 213 (664)
+|+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+|++|+++. ..|.. ...+|+.|++++|++++.
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI 187 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCcc
Confidence 99999 8888776 899999999999996666678999999999999999963 44432 222788888888888874
Q ss_pred CCCCCcccccCccccccC
Q 006031 214 ITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 214 ~p~~~~l~~~~~~~~~~N 231 (664)
... ...++..+.+.+|
T Consensus 188 ~~~--~~~~L~~L~l~~n 203 (332)
T 2ft3_A 188 PKD--LPETLNELHLDHN 203 (332)
T ss_dssp CSS--SCSSCSCCBCCSS
T ss_pred Ccc--ccCCCCEEECCCC
Confidence 432 2245666666665
No 325
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.62 E-value=4.3e-16 Score=175.27 Aligned_cols=155 Identities=21% Similarity=0.207 Sum_probs=132.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 157 (664)
..+..|+|++|.+.+ +++ .+..+++|+.|+|++|.+++.+| .+.++++|++|+|++|.+++.+|..+.++++|++|
T Consensus 373 ~~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 456667777777766 334 48889999999999999988876 58889999999999999999999999999999999
Q ss_pred eccCCcCc-CCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCCC
Q 006031 158 DLSYNNLS-GPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPS 233 (664)
Q Consensus 158 ~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~ 233 (664)
+|++|+++ +.+|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++.+|. ...+.++..+.+.+|++
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 689999999999999999999999887754 778999999999999998874 35667788888999998
Q ss_pred CCC
Q 006031 234 LCG 236 (664)
Q Consensus 234 lcg 236 (664)
.|.
T Consensus 531 ~~~ 533 (570)
T 2z63_A 531 DCS 533 (570)
T ss_dssp CCC
T ss_pred cCC
Confidence 875
No 326
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=3.4e-16 Score=182.76 Aligned_cols=149 Identities=19% Similarity=0.212 Sum_probs=132.2
Q ss_pred CcEEEEEEcCCCCCC-----------------cCCCcccc--CCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCc
Q 006031 80 QKVVRVVLQGLDLGG-----------------IFAPNSLT--KLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNF 139 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g-----------------~~~p~~l~--~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~ 139 (664)
..+..|+|++|.|+| .+| ..++ +|++|++|+|++|++.|.+| .|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP-~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN-EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT-SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCC-hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 678999999999999 354 4787 99999999999999999999 59999999999999998
Q ss_pred -CCC-CCcccccCCC-------CCCEEeccCCcCcCCCch--hhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccC
Q 006031 140 -FTG-SFPPSLLSLH-------RLKTLDLSYNNLSGPLPK--ELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSG 207 (664)
Q Consensus 140 -l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~ 207 (664)
|+| .+|..+++++ +|++|+|++|+|+ .+|. .++.+++|+.|+|++|+++ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 999 8999887766 9999999999999 9999 9999999999999999999 78754 778999999999
Q ss_pred CcccccCC-CCCcccc-cCccccccCC
Q 006031 208 NNFTGAIT-VTSTLSR-FGISSFLFNP 232 (664)
Q Consensus 208 N~l~g~~p-~~~~l~~-~~~~~~~~N~ 232 (664)
|+++ .+| ....+.+ +..+.+.+|.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCC
Confidence 9999 555 4455666 7778888875
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.62 E-value=1.4e-15 Score=146.68 Aligned_cols=129 Identities=21% Similarity=0.314 Sum_probs=111.6
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCC-CCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGP-IPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.. +..+..+++|++|+|++|++++. ++.++++++|++|+|++|++++..|..+.++++|++|+
T Consensus 66 ~~L~~L~l~~n~~~~---~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHATN---YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCSC---CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCCc---chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 578999999997765 23799999999999999999985 45799999999999999999998999999999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccc
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g 212 (664)
|++|++.+.+| .+..+++|+.|+|++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999444777 799999999999999999985544578999999999999875
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.62 E-value=4.4e-15 Score=150.74 Aligned_cols=156 Identities=24% Similarity=0.263 Sum_probs=138.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
.++..|+|++|.++. +++..+.++++|++|+|++|++++.++. |.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 61 ~~L~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCSC-CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCe-eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 578999999999997 6666789999999999999999988774 78999999999999999987788899999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPSLC 235 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~lc 235 (664)
|++|+|++..+..+..+++|+.|+|++|++++..+.. .+++|+.|+|++|++++.++. ...+.++..+.+.+|++.|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999766667899999999999999999876643 679999999999999987764 3456778889999999988
Q ss_pred C
Q 006031 236 G 236 (664)
Q Consensus 236 g 236 (664)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 6
No 329
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.62 E-value=1.6e-15 Score=153.43 Aligned_cols=146 Identities=18% Similarity=0.194 Sum_probs=118.6
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..++.|+|+++++.. + + .+..+++|+.|+|++|+|++..| +.++++|+.|+|++|++++ +|.... ++|++|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-L-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-C-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCccc-c-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 568889999998886 4 3 68889999999999999998777 8899999999999999984 565333 88999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLC 235 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lc 235 (664)
++|++++ +| .+..+++|+.|+|++|++++..+-..+++|+.|+|++|++++. +....+.++..+.+.+|+..+
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 9999985 44 5888999999999999998764334778899999999999887 555667777788888886543
No 330
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.61 E-value=2.6e-16 Score=163.76 Aligned_cols=150 Identities=23% Similarity=0.141 Sum_probs=111.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--C---------------CCCCCCCCEEeccCCcCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--D---------------LSGLVNLKSLFLDHNFFTG 142 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~---------------~~~l~~L~~L~L~~N~l~g 142 (664)
..+..|+|++|.+.+.. .+..+++|++|+|++|+|++..+ . ...+++|+.|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETL---DLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEE---EETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcch---hhhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 56888888888887742 27788888888888888776432 0 1235677777777888876
Q ss_pred CCcccccCCCCCCEEeccCCcCcCCCchhhc-CCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCccc
Q 006031 143 SFPPSLLSLHRLKTLDLSYNNLSGPLPKELA-SQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLS 221 (664)
Q Consensus 143 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~ 221 (664)
..|..++.+++|++|+|++|++++..|..+. .+++|+.|+|++|++++..+...+++|+.|+|++|++++.++....+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 214 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchhhhcccC
Confidence 6677788888888888888888877676664 678888888888888876555567888888888888888776655666
Q ss_pred ccCccccccCC
Q 006031 222 RFGISSFLFNP 232 (664)
Q Consensus 222 ~~~~~~~~~N~ 232 (664)
++..+.+.+|.
T Consensus 215 ~L~~L~L~~N~ 225 (317)
T 3o53_A 215 GVTWISLRNNK 225 (317)
T ss_dssp TCSEEECTTSC
T ss_pred cccEEECcCCc
Confidence 77777777763
No 331
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.5e-15 Score=143.48 Aligned_cols=128 Identities=25% Similarity=0.312 Sum_probs=112.6
Q ss_pred CEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCc
Q 006031 108 RVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNR 187 (664)
Q Consensus 108 ~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 187 (664)
+.+++++|+|+..++.+ .++|+.|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 68999999999654444 369999999999999 899999999999999999999998888899999999999999999
Q ss_pred CccCCCCC--CCCCCcEEEccCCcccccCCC-CCcccccCccccccCCCCCCcc
Q 006031 188 FNGSIPPL--NQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPSLCGEI 238 (664)
Q Consensus 188 l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~lcg~~ 238 (664)
|++.+|.. .+++|+.|+|++|+|++..+. ...+.++..+.+.+|++.|...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99887753 789999999999999987764 3557788889999999998643
No 332
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=1.4e-15 Score=173.06 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=134.6
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCC-CCCcccccCCCCCCEEe
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFT-GSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~ 158 (664)
.+..+++.+++.....++..+..+++|+.++++.|.+++..| .+..+++|+.|+|++|++. +.+|..|..+++|++||
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 455666776766665556678899999999999999999888 4778999999999999854 45788899999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC-Ccc-cccCccccccCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT-STL-SRFGISSFLFNPSL 234 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~-~~l-~~~~~~~~~~N~~l 234 (664)
|++|+|++..|..|.++++|+.|+|++|+|++.+|.. .+++|+.|||++|+|++.+|.. ..+ .++..+.+.+||+.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999999999999999999999999999887753 7899999999999999998843 233 56778899999999
Q ss_pred CCc
Q 006031 235 CGE 237 (664)
Q Consensus 235 cg~ 237 (664)
|..
T Consensus 581 C~C 583 (635)
T 4g8a_A 581 CTC 583 (635)
T ss_dssp CSG
T ss_pred ccC
Confidence 964
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.61 E-value=2.6e-15 Score=155.53 Aligned_cols=144 Identities=23% Similarity=0.318 Sum_probs=102.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.++..|+|++|.+.+ +++ +.++++|++|+|++|.+++. |.+.++++|+.|+|++|++++ +|. +..+++|++|+|
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 567788888888877 333 77888888888888887763 567778888888888888874 444 777888888888
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|++++. |. +..+++|+.|+|++|++++..+-..+++|+.|++++|++++..+ ...+.++..+.+.+|.
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 88888743 33 77777888888888887765554466777777777777776554 4455556666666653
No 334
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=3.2e-15 Score=169.40 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=89.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.+ +++..++++++|++|+|++|.|++.+|. |+++++|++|+|++|.|++..|..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 367788888888887 4556888888888888888888888774 68888888888888888844444468888888888
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNG 190 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 190 (664)
|++|+|++..|..+..+++|+.|+|++|++++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 88888888778788888888888888888775
No 335
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.60 E-value=2.6e-15 Score=169.24 Aligned_cols=145 Identities=26% Similarity=0.383 Sum_probs=127.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.|.+. ++ +.+|++|+.|+|++|.|++ +|.+..|++|+.|+|++|+|++ + +.+.+|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~-~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDI-KP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCC-GG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCC-hh--hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 6799999999999984 33 9999999999999999987 5689999999999999999995 4 46899999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPS 233 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~ 233 (664)
++|+|++. ..+..+++|+.|+|++|+|++.+|-..+++|+.|+|++|+|++. |....+.++..+.+.+|+.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 99999965 67999999999999999999988866889999999999999985 5566777888888887753
No 336
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=2.6e-16 Score=165.53 Aligned_cols=135 Identities=9% Similarity=0.087 Sum_probs=96.2
Q ss_pred hccccccCceeEEEEEEcCCeEEEEEEccCcccc------------CCcHHH--------HHHHHHHHcCCCCCCcccce
Q 006031 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA------------GTSNEM--------YEQHMESVGGLRHPNLVPLR 448 (664)
Q Consensus 389 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~------------~~~~~~--------~~~e~~~l~~l~H~niv~l~ 448 (664)
.+.||+|+||.||+|...+|+.||||+++..... ...... ..+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 4679999999999999999999999987542211 011111 23455666666544432222
Q ss_pred EEEecCCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCC--
Q 006031 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFE-- 526 (664)
Q Consensus 449 g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~-- 526 (664)
-+.. ...+|||||++++.|..+.. ......++.|++.+|.|||+. +||||||||.|||+++++.
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~~-gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAKH-GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEEEEECSS
T ss_pred eeec--cCceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeCCCCcc
Confidence 2211 23479999999988865542 112456889999999999998 9999999999999988763
Q ss_pred --------eEEeecccccc
Q 006031 527 --------ACLADYCLTAL 537 (664)
Q Consensus 527 --------~ki~DfGla~~ 537 (664)
+.|+||+-+..
T Consensus 246 d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CTTSEEEEEEECCCTTCEE
T ss_pred cccccccceEEEEeCCccc
Confidence 88999987654
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.60 E-value=1.7e-15 Score=150.69 Aligned_cols=149 Identities=19% Similarity=0.161 Sum_probs=124.6
Q ss_pred CcEEEEEEcCCC-CCCcCCCccccCCCCCCEEEecC-CCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCC-
Q 006031 80 QKVVRVVLQGLD-LGGIFAPNSLTKLDQLRVLGLQN-NSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLK- 155 (664)
Q Consensus 80 ~~v~~l~l~~~~-l~g~~~p~~l~~l~~L~~L~L~~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~- 155 (664)
.++..|+|++|. +++ +++..+.++++|++|+|++ |+|++..+ .|.++++|++|+|++|++++ +|. +.++++|+
T Consensus 55 ~~L~~L~l~~n~~l~~-i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQ-LESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCE-ECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcce-eCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 578999999997 776 6676899999999999998 99998776 58899999999999999995 887 88999998
Q ss_pred --EEeccCC-cCcCCCchhhcCCCCCC-eeeCcCCcCccCCCCC--CCCCCcEEEccCCc-ccccCCCC-Ccc-cccCcc
Q 006031 156 --TLDLSYN-NLSGPLPKELASQGRLY-SLRLDVNRFNGSIPPL--NQSSLKIFNVSGNN-FTGAITVT-STL-SRFGIS 226 (664)
Q Consensus 156 --~L~l~~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~-l~g~~p~~-~~l-~~~~~~ 226 (664)
+|+|++| ++++..+..+..+++|+ .|+|++|+++ .+|.. ..++|+.|++++|+ +++..+.. ..+ .++..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99976667799999999 9999999998 55543 44789999999995 98776632 345 667777
Q ss_pred ccccCC
Q 006031 227 SFLFNP 232 (664)
Q Consensus 227 ~~~~N~ 232 (664)
.+.+|.
T Consensus 211 ~l~~N~ 216 (239)
T 2xwt_C 211 DVSQTS 216 (239)
T ss_dssp ECTTCC
T ss_pred ECCCCc
Confidence 777764
No 338
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.60 E-value=2.4e-15 Score=165.51 Aligned_cols=154 Identities=20% Similarity=0.207 Sum_probs=132.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.+ +.|..+.+|++|++|+|++|+|++.++. |.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSA-VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCE-eChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 578999999999998 5566899999999999999999987774 78999999999999999988899999999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC--CCCCCCcEEEccCCcccccCCC-CCcccccCccccccCCCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNPSL 234 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~~l 234 (664)
|++|++++..|..+..+++|+.|+|++|++++.++. ..+++|+.|+|++|++++..+. ...+.++..+.+.+|+.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 999999988889999999999999999999976553 3788999999999999987762 344556666777766543
No 339
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.59 E-value=5.7e-15 Score=156.52 Aligned_cols=156 Identities=21% Similarity=0.200 Sum_probs=128.1
Q ss_pred CccccceEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CC-CCCCCCEEeccCCcCCCCCcc
Q 006031 69 FCQWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LS-GLVNLKSLFLDHNFFTGSFPP 146 (664)
Q Consensus 69 ~C~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~-~l~~L~~L~L~~N~l~g~~p~ 146 (664)
.|- .+=.|.. ..+++.+++|.. +|. .+. ..|+.|+|++|+|++..+. +. ++++|+.|+|++|+|++..|.
T Consensus 11 ~Cp-~~C~C~~---~~l~c~~~~l~~-iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~ 82 (361)
T 2xot_A 11 SCP-ANCLCAS---NILSCSKQQLPN-VPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE 82 (361)
T ss_dssp TCC-TTCEEET---TEEECCSSCCSS-CCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT
T ss_pred CCC-CCCEECC---CEEEeCCCCcCc-cCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh
Confidence 453 3455654 368999999988 543 444 4689999999999998885 55 899999999999999977778
Q ss_pred cccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCC----Ccc
Q 006031 147 SLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT----STL 220 (664)
Q Consensus 147 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~----~~l 220 (664)
.|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+.. ..+
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l 162 (361)
T 2xot_A 83 AFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKL 162 (361)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----C
T ss_pred hccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccC
Confidence 8999999999999999999777778999999999999999999877753 7899999999999999865532 345
Q ss_pred cccCccccccCC
Q 006031 221 SRFGISSFLFNP 232 (664)
Q Consensus 221 ~~~~~~~~~~N~ 232 (664)
.++..+.+.+|.
T Consensus 163 ~~L~~L~L~~N~ 174 (361)
T 2xot_A 163 PKLMLLDLSSNK 174 (361)
T ss_dssp TTCCEEECCSSC
T ss_pred CcCCEEECCCCC
Confidence 667777777763
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.59 E-value=3e-15 Score=155.08 Aligned_cols=145 Identities=25% Similarity=0.374 Sum_probs=127.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+.+. + .+.++++|++|+|++|++++. |.+.++++|+.|+|++|++++ +|. +.++++|++|+|
T Consensus 85 ~~L~~L~L~~n~l~~~--~-~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--S-AIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--G-GGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--h-hhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEc
Confidence 5799999999999983 3 799999999999999999985 559999999999999999995 444 899999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPS 233 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~ 233 (664)
++|++++ +|. +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++..| ...+.++..+.+.+|+.
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEE
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCee
Confidence 9999995 555 99999999999999999987665588999999999999998775 56677788888888864
No 341
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.4e-15 Score=141.03 Aligned_cols=128 Identities=24% Similarity=0.195 Sum_probs=109.8
Q ss_pred CCCCCCEEEecCCCCC-CCCCC-CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCe
Q 006031 103 KLDQLRVLGLQNNSLT-GPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYS 180 (664)
Q Consensus 103 ~l~~L~~L~L~~N~l~-g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 180 (664)
..++|+.|+|++|+++ |.+|. +..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 77775 68899999999999999965 88999999999999999999889999989999999
Q ss_pred eeCcCCcCccCC--CC-CCCCCCcEEEccCCcccccCC----CCCcccccCccccccCC
Q 006031 181 LRLDVNRFNGSI--PP-LNQSSLKIFNVSGNNFTGAIT----VTSTLSRFGISSFLFNP 232 (664)
Q Consensus 181 L~l~~N~l~g~~--p~-~~~~~L~~l~l~~N~l~g~~p----~~~~l~~~~~~~~~~N~ 232 (664)
|+|++|++++.. +. ..+++|+.|++++|.+++..+ ....+.++..+.+.+|.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 999999999754 22 378899999999999998776 34556666666666663
No 342
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.59 E-value=5.9e-15 Score=151.55 Aligned_cols=144 Identities=25% Similarity=0.327 Sum_probs=125.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..++.|+++++.+... + .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+.++++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4688999999999873 3 59999999999999999998777 9999999999999999995 44 4999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|++++ + ..+..+++|+.|+|++|++++...-..+++|+.|++++|++++..| ...+.++..+.+.+|.
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCcchhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 9999996 4 4789999999999999999976222378999999999999999876 6677778888888774
No 343
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.58 E-value=4.9e-15 Score=170.49 Aligned_cols=156 Identities=28% Similarity=0.338 Sum_probs=122.2
Q ss_pred cEEEEEEcCCCCCC-cCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCC----Cc----ccccC
Q 006031 81 KVVRVVLQGLDLGG-IFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGS----FP----PSLLS 150 (664)
Q Consensus 81 ~v~~l~l~~~~l~g-~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~----~p----~~~~~ 150 (664)
.+..|+|.+|.+.+ ...|..+.++++|+.|+|++|+|++.+|. |.++++|++|+|++|++++. +| ..+.+
T Consensus 455 ~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 455 SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp TCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred ccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 34445555555542 12355788899999999999999987774 88899999999999998853 22 23788
Q ss_pred CCCCCEEeccCCcCcCCCch-hhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCC--cccccCc
Q 006031 151 LHRLKTLDLSYNNLSGPLPK-ELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTS--TLSRFGI 225 (664)
Q Consensus 151 l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~--~l~~~~~ 225 (664)
+++|++|+|++|+|+ .+|. .|..+++|+.|+|++|++++.++.. .+++|+.|+|++|+|++.+|... .+.++..
T Consensus 535 l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 613 (680)
T 1ziw_A 535 LSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613 (680)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE
T ss_pred CCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCE
Confidence 999999999999998 5665 6889999999999999999665543 67899999999999999877421 4677888
Q ss_pred cccccCCCCCCc
Q 006031 226 SSFLFNPSLCGE 237 (664)
Q Consensus 226 ~~~~~N~~lcg~ 237 (664)
+.+.+||+.|..
T Consensus 614 l~l~~N~~~c~c 625 (680)
T 1ziw_A 614 LDMRFNPFDCTC 625 (680)
T ss_dssp EECTTCCCCBCC
T ss_pred EEccCCCcccCC
Confidence 899999999963
No 344
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.58 E-value=2.4e-15 Score=158.81 Aligned_cols=110 Identities=20% Similarity=0.230 Sum_probs=57.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCcc--cccCCCCCCE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPP--SLLSLHRLKT 156 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~ 156 (664)
..++.|+|++|.+.+ +++..+.++++|++|+|++|++++.++. |.++++|++|+|++|+++ .+|. .+.++++|++
T Consensus 76 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCc-cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 355566666666655 3344555666666666666666554443 555555555555555555 3333 4455555555
Q ss_pred EeccCC-cCcCCCchhhcCCCCCCeeeCcCCcCccC
Q 006031 157 LDLSYN-NLSGPLPKELASQGRLYSLRLDVNRFNGS 191 (664)
Q Consensus 157 L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 191 (664)
|+|++| .+++..|..+..+++|+.|++++|++++.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 555555 23333334444444444444444444443
No 345
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=157.63 Aligned_cols=151 Identities=17% Similarity=0.096 Sum_probs=111.3
Q ss_pred cEEEEEEcCCCCCCcCCCccc--cCCCCCCEEEecCCCCCCCCCC-----CCCCCCCCEEeccCCcCCCCCcccccCCCC
Q 006031 81 KVVRVVLQGLDLGGIFAPNSL--TKLDQLRVLGLQNNSLTGPIPD-----LSGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l--~~l~~L~~L~L~~N~l~g~~p~-----~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 153 (664)
++..|+|++|.+.+..+. .+ .++++|++|+|++|.+++..|. +..+++|++|+|++|++++..|..+.++++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488899999999886544 55 8889999999999999887662 456888999999999998777888888999
Q ss_pred CCEEeccCCcCcCC--Cch--hhcCCCCCCeeeCcCCcCccCCCC-----CCCCCCcEEEccCCcccccCCC-CCcc---
Q 006031 154 LKTLDLSYNNLSGP--LPK--ELASQGRLYSLRLDVNRFNGSIPP-----LNQSSLKIFNVSGNNFTGAITV-TSTL--- 220 (664)
Q Consensus 154 L~~L~l~~N~l~g~--~p~--~~~~l~~L~~L~l~~N~l~g~~p~-----~~~~~L~~l~l~~N~l~g~~p~-~~~l--- 220 (664)
|++|+|++|++.+. +|. .+..+++|++|+|++|+++...+. ..+++|++|||++|+|++.+|. ...+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999988753 322 235778888888888888632221 1557788888888888877542 2333
Q ss_pred cccCccccccCC
Q 006031 221 SRFGISSFLFNP 232 (664)
Q Consensus 221 ~~~~~~~~~~N~ 232 (664)
.++..+.+.+|.
T Consensus 251 ~~L~~L~Ls~N~ 262 (310)
T 4glp_A 251 SALNSLNLSFAG 262 (310)
T ss_dssp TTCCCEECCSSC
T ss_pred CcCCEEECCCCC
Confidence 456666666663
No 346
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.58 E-value=1.5e-14 Score=151.27 Aligned_cols=149 Identities=16% Similarity=0.182 Sum_probs=97.1
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCC--CCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTG--PIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g--~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 156 (664)
..+..|+|++|.+.+ +++..+.++++|+.|+|++|.++. ..| .+.++++|++|+|++|+++ .+|..+. ++|++
T Consensus 121 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~ 196 (330)
T 1xku_A 121 KTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTE 196 (330)
T ss_dssp TTCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSE
T ss_pred ccccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCE
Confidence 357778888888876 445567778888888888887753 444 4666777777777777776 4665554 56777
Q ss_pred EeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 157 LDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 157 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
|+|++|++++..|..+..+++|+.|+|++|++++..+.. .+++|+.|+|++|+++..+.....+.++..+.+.+|+
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCc
Confidence 777777776666666666777777777777766655532 5566667777777666433333444555555555553
No 347
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=5.6e-15 Score=166.16 Aligned_cols=130 Identities=20% Similarity=0.224 Sum_probs=85.0
Q ss_pred cCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCC--CCcccccCCCCCCEEeccCCcCcCCCchh-hcCCCC
Q 006031 102 TKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTG--SFPPSLLSLHRLKTLDLSYNNLSGPLPKE-LASQGR 177 (664)
Q Consensus 102 ~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~ 177 (664)
..+++|++|+|++|++++.+| .++++++|+.|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 556677777777777776555 46667777777777777775 33456677777777777777777656553 566677
Q ss_pred CCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 178 LYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 178 L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
|+.|+|++|++++.+|..-.++|+.|+|++|+|+..++....+.++..+.+.+|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSS
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCC
Confidence 777777777777666554335677777777777744444445556666666665
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.57 E-value=1.8e-15 Score=157.34 Aligned_cols=152 Identities=16% Similarity=0.103 Sum_probs=125.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCccccc-CCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLL-SLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L 157 (664)
..+..|+|++|.+.+. ++ ..+++|+.|+|++|++++..| .++.+++|++|+|++|.+++..|..+. ++++|++|
T Consensus 99 ~~L~~L~l~~n~l~~~-~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISRV-SC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSEE-EE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCCc-Cc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 4566677777777763 22 346889999999999999877 688899999999999999987777774 79999999
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccCCCCCcccccCccccccCCCCCC
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCG 236 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~lcg 236 (664)
+|++|++++. |. ...+++|+.|+|++|++++.++.. .+++|+.|+|++|+|++.++....+.++..+.+.+|+..|+
T Consensus 175 ~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 175 NLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp ECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999854 43 345899999999999999876654 67899999999999997665556677888899999998876
Q ss_pred c
Q 006031 237 E 237 (664)
Q Consensus 237 ~ 237 (664)
.
T Consensus 253 ~ 253 (317)
T 3o53_A 253 T 253 (317)
T ss_dssp H
T ss_pred C
Confidence 4
No 349
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.57 E-value=1.5e-14 Score=154.86 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=71.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCC-CCCCCCCCEEeccCCcCCCCCccc-ccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPS-LLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L 157 (664)
..+..|+|+++.+.+ +++..+.++++|++|+|++|++++.+|. |+++++|++|+|++|+++ .+|.. |.++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 356667777777665 4444667777777777777777766664 566777777777777776 44444 4667777777
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNG 190 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 190 (664)
+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 777777766556666666666666666666654
No 350
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.57 E-value=1.7e-14 Score=150.96 Aligned_cols=146 Identities=18% Similarity=0.241 Sum_probs=76.3
Q ss_pred EEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCC--CCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 82 VVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTG--PIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 82 v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g--~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
+..|+|++|.+.+ +++..+.++++|+.|+|++|.++. ..| .+..+ +|+.|+|++|+++ .+|..+. ++|++|+
T Consensus 125 L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 125 LVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELH 199 (332)
T ss_dssp CCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCB
T ss_pred CCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEE
Confidence 4444444454444 334345666666666666666642 333 23333 4444444444443 2333332 4566666
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
|++|++++..|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|+++..++....+.++..+.+.+|.
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCC
Confidence 6666666555556666666666666666666555432 4556666666666666333223344445555555553
No 351
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=3.2e-15 Score=137.19 Aligned_cols=111 Identities=23% Similarity=0.210 Sum_probs=98.9
Q ss_pred CCCCCCEEEecCCCCC-CCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCe
Q 006031 103 KLDQLRVLGLQNNSLT-GPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYS 180 (664)
Q Consensus 103 ~l~~L~~L~L~~N~l~-g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 180 (664)
..++|+.|+|++|+++ +.+| .+..+++|++|+|++|++++. ..+.++++|++|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999999 7777 568999999999999999965 78999999999999999999889999999999999
Q ss_pred eeCcCCcCccCC--CC-CCCCCCcEEEccCCcccccCC
Q 006031 181 LRLDVNRFNGSI--PP-LNQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 181 L~l~~N~l~g~~--p~-~~~~~L~~l~l~~N~l~g~~p 215 (664)
|+|++|++++.. +. ..+++|+.|++++|++++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999999742 22 378899999999999998765
No 352
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.57 E-value=4.3e-15 Score=167.07 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=127.8
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCC-CCCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFT-GSFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L 157 (664)
..+..|+|++|.+.+..+...+.++++|++|+|++|.+++.+| .+.++++|+.|+|++|+++ +.+|..+..+++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 5788999999999986555679999999999999999999888 5889999999999999998 6899999999999999
Q ss_pred eccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCc
Q 006031 158 DLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTST 219 (664)
Q Consensus 158 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~ 219 (664)
+|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|.+++.+|....
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 99999999999999999999999999999999987753 789999999999999999885433
No 353
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=3.6e-14 Score=134.19 Aligned_cols=129 Identities=17% Similarity=0.117 Sum_probs=110.5
Q ss_pred CCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCC
Q 006031 107 LRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186 (664)
Q Consensus 107 L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 186 (664)
.+.+++++|+++..+..+ .++|+.|+|++|++++..+..+.++++|++|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 578999999998765444 479999999999999766667899999999999999999766677899999999999999
Q ss_pred cCccCCCCC--CCCCCcEEEccCCcccccCCCC-CcccccCccccccCCCCCCc
Q 006031 187 RFNGSIPPL--NQSSLKIFNVSGNNFTGAITVT-STLSRFGISSFLFNPSLCGE 237 (664)
Q Consensus 187 ~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~-~~l~~~~~~~~~~N~~lcg~ 237 (664)
++++.++.. .+++|+.|+|++|+|++.++.. ..+.++..+.+.+|++.|..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999877753 7899999999999999877754 55778888899999888753
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=162.24 Aligned_cols=149 Identities=19% Similarity=0.227 Sum_probs=118.0
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCC--CCcccccCCCCCCEE
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTG--SFPPSLLSLHRLKTL 157 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L 157 (664)
.+..|+++++++.+.. ....+++|++|+|++|++++.+| .++++++|+.|+|++|++++ .+|..+.++++|++|
T Consensus 303 ~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred ceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 3666777777665521 23688899999999999998666 68889999999999999986 677888999999999
Q ss_pred eccCCcCcCCCchh-hcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 158 DLSYNNLSGPLPKE-LASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 158 ~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
+|++|++++.+|.. +..+++|+.|+|++|++++.+|....++|+.|+|++|+++..++....+.++..+.+.+|.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~ 455 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQ 455 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCc
Confidence 99999999878875 7788899999999999988877654478999999999998443334566677777777773
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=1.1e-14 Score=163.19 Aligned_cols=107 Identities=28% Similarity=0.235 Sum_probs=52.3
Q ss_pred EEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccC
Q 006031 82 VVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161 (664)
Q Consensus 82 v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 161 (664)
+..|+|++|.|++ + | .+++|++|+.|+|++|+|+..++.|++|++|+.|+|++|+|++ +| .|++|++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-l-p-~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-L-C-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-C-C-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-C-c-CccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 3445555555554 2 2 1555555555555555555222234455555555555555553 44 455555555555555
Q ss_pred CcCcCCC-chhhcCCCCCCeeeCcCCcCccCCC
Q 006031 162 NNLSGPL-PKELASQGRLYSLRLDVNRFNGSIP 193 (664)
Q Consensus 162 N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p 193 (664)
|+|++.+ |..++.+++|+.|+|++|+|++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 5555443 5555555555555555555554444
No 356
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.54 E-value=2.2e-14 Score=160.69 Aligned_cols=152 Identities=21% Similarity=0.177 Sum_probs=129.1
Q ss_pred eEecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCC
Q 006031 75 VICYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153 (664)
Q Consensus 75 v~C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 153 (664)
..|....+ .++++++++. +|+ .+. ++|++|+|++|++++.+| .|.++++|++|+|++|++++..|..|.++++
T Consensus 2 ~~C~~~~~--c~~~~~~l~~-ip~-~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFTS-IPS-GLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp CEECTTSE--EECTTSCCSS-CCS-CCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCCce--EECCCCcccc-ccc-cCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 35876666 7889999987 554 454 799999999999999887 6999999999999999999888899999999
Q ss_pred CCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccC-CCC--CCCCCCcEEEccCCcccccCC--CCCcccccCcccc
Q 006031 154 LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGS-IPP--LNQSSLKIFNVSGNNFTGAIT--VTSTLSRFGISSF 228 (664)
Q Consensus 154 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~--~~~~~L~~l~l~~N~l~g~~p--~~~~l~~~~~~~~ 228 (664)
|++|+|++|++++..|..++.+++|++|+|++|++++. +|. ..+++|+.|++++|++.+.+| ....+.++..+.+
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 99999999999988888899999999999999999963 443 378999999999999766665 3455667777777
Q ss_pred ccCC
Q 006031 229 LFNP 232 (664)
Q Consensus 229 ~~N~ 232 (664)
.+|.
T Consensus 156 ~~n~ 159 (549)
T 2z81_A 156 KALS 159 (549)
T ss_dssp EETT
T ss_pred cCCc
Confidence 7764
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.54 E-value=6.4e-16 Score=178.48 Aligned_cols=131 Identities=28% Similarity=0.311 Sum_probs=116.8
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.. +++ .+++|++|++|+|++|.|+ .+| .|++|++|++|+|++|+|+ .+|..|++|++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~~-l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIFN-ISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCSC-CCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCCC-CCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 678999999999985 655 7889999999999999999 555 6999999999999999999 8999999999999999
Q ss_pred ccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CC-CCCcEEEccCCcccccCC
Q 006031 159 LSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQ-SSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 159 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~-~~L~~l~l~~N~l~g~~p 215 (664)
|++|+|+ .||..|+.+++|+.|+|++|+|+|.+|.. .+ ..+..|+|++|.++|.+|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 9999997 89999999999999999999999988864 11 122357899999999998
No 358
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=1.4e-14 Score=136.32 Aligned_cols=105 Identities=24% Similarity=0.211 Sum_probs=75.1
Q ss_pred EEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCC
Q 006031 84 RVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYN 162 (664)
Q Consensus 84 ~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 162 (664)
.|++++++|.. +|. .+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~~-ip~-~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLAS-VPT-GIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCSS-CCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCc-cCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34455666666 433 443 778888888888888776 4778888888888888888555555678888888888888
Q ss_pred cCcCCCchhhcCCCCCCeeeCcCCcCccCC
Q 006031 163 NLSGPLPKELASQGRLYSLRLDVNRFNGSI 192 (664)
Q Consensus 163 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 192 (664)
+|++..|..+..+++|+.|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888655556777777777777777766543
No 359
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.6e-15 Score=138.86 Aligned_cols=128 Identities=18% Similarity=0.151 Sum_probs=103.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCC-CCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEe
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLD-QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLD 158 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~-~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 158 (664)
..+..|+|++|.+.. + + .+..+. +|++|+|++|+|++. +.+.++++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i-~-~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-I-E-NLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-C-C-CGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-h-H-HhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 467889999999986 4 3 466655 999999999999886 7888999999999999999854334458899999999
Q ss_pred ccCCcCcCCCch--hhcCCCCCCeeeCcCCcCccCCCC-----CCCCCCcEEEccCCcccc
Q 006031 159 LSYNNLSGPLPK--ELASQGRLYSLRLDVNRFNGSIPP-----LNQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 159 l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~-----~~~~~L~~l~l~~N~l~g 212 (664)
|++|+|+ .+|. .+..+++|+.|+|++|.++...+. ..+++|+.||+++|.+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999996 6776 788899999999999999854332 267889999999988764
No 360
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.54 E-value=1.7e-14 Score=158.41 Aligned_cols=143 Identities=27% Similarity=0.339 Sum_probs=77.3
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+.+. + .+..+++|+.|+|++|.+++..| +.++++|+.|+|++|.+++. |. +..+++|++|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--G-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--G-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--h-hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEc
Confidence 3456666666666652 2 45666666666666666665544 55566666666666666532 22 555566666666
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
++|++++..| +..+++|+.|+|++|++++.+|...+++|+.|++++|++++. +....+.++..+.+.+|
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN 363 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC
Confidence 6666654322 555555566666555555554433445555555555555543 22333344444444444
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=1.8e-14 Score=161.46 Aligned_cols=109 Identities=30% Similarity=0.382 Sum_probs=99.5
Q ss_pred CCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcC
Q 006031 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDV 185 (664)
Q Consensus 106 ~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 185 (664)
.|+.|+|++|+|++ +|.|++|++|+.|+|++|+|+ .+|..|++|++|++|+|++|+|++ +| .++.+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 57899999999998 567999999999999999999 999999999999999999999996 88 899999999999999
Q ss_pred CcCccCC-CCC--CCCCCcEEEccCCcccccCCCCC
Q 006031 186 NRFNGSI-PPL--NQSSLKIFNVSGNNFTGAITVTS 218 (664)
Q Consensus 186 N~l~g~~-p~~--~~~~L~~l~l~~N~l~g~~p~~~ 218 (664)
|+|++.+ |.. .+++|+.|+|++|+|++.+|...
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQE 553 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTT
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHH
Confidence 9999986 653 78999999999999999987543
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.53 E-value=3.4e-14 Score=158.60 Aligned_cols=113 Identities=26% Similarity=0.322 Sum_probs=65.7
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEecc
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLS 160 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 160 (664)
.++.|+|++|.|+. +| ..+++|+.|+|++|+|++ +|.+.+ +|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 81 ~L~~L~Ls~N~l~~-ip----~~l~~L~~L~Ls~N~l~~-ip~l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALIS-LP----ELPASLEYLDACDNRLST-LPELPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCSC-CC----CCCTTCCEEECCSSCCSC-CCCCCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCcc-cc----cccCCCCEEEccCCCCCC-cchhhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 46677777777764 43 345666677777776666 443443 66666666666664 555 45566666666
Q ss_pred CCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCccc
Q 006031 161 YNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFT 211 (664)
Q Consensus 161 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~ 211 (664)
+|+|++ +|. .+++|+.|+|++|+|++ +|.+. ++|+.|+|++|+|+
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE 193 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC
Confidence 666654 554 34556666666666555 33322 55555555555555
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.53 E-value=1.9e-14 Score=162.26 Aligned_cols=144 Identities=25% Similarity=0.323 Sum_probs=126.4
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|+++.+.. + + .+..|++|+.|+|++|+|++.+| +.+|++|+.|+|++|+|++ +| .+.+|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~-l-~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-V-Q-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCC-C-T-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-C-h-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 567889999999987 3 3 69999999999999999998777 9999999999999999995 55 7999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|+|++ + ..+..+++|+.|+|++|+|++...-..+++|+.|+|++|+|++.+| ...+.++..+.+.+|.
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 9999996 4 4699999999999999999986223488999999999999999887 6777888888888874
No 364
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=5.3e-14 Score=132.26 Aligned_cols=108 Identities=21% Similarity=0.158 Sum_probs=96.2
Q ss_pred CCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCC
Q 006031 107 LRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186 (664)
Q Consensus 107 L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 186 (664)
.+.|++++|+|+..+..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 578999999999755555 389999999999999888999999999999999999999766667899999999999999
Q ss_pred cCccCCCCC--CCCCCcEEEccCCcccccCCC
Q 006031 187 RFNGSIPPL--NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 187 ~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~ 216 (664)
+|++.++.. .+++|+.|+|++|.|++..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 999877753 789999999999999987653
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.52 E-value=6.6e-14 Score=141.44 Aligned_cols=126 Identities=21% Similarity=0.308 Sum_probs=110.7
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+++ +++ +.++++|+.|+|++|++++. |.+.. ++|+.|+|++|++++ +| .+.++++|++|+|
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~l-~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKNL-NGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSCC-TTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCCc-Ccccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 679999999999998 433 99999999999999999984 44555 999999999999995 44 6999999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~ 214 (664)
++|+|++ +| .+..+++|+.|+|++|++++...-..+++|+.|++++|.+++..
T Consensus 136 s~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCCc
Confidence 9999995 55 79999999999999999998733347899999999999999774
No 366
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.51 E-value=9.4e-14 Score=151.82 Aligned_cols=137 Identities=19% Similarity=0.181 Sum_probs=67.7
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEecc
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLS 160 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 160 (664)
.+..|+|++|.+++. | ++.+++|++|+|++|+|++. | ++++++|++|+|++|++++ +| ++++++|++|+|+
T Consensus 65 ~L~~L~Ls~n~l~~~--~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 65 GLTKLICTSNNITTL--D--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TCSEEECCSSCCSCC--C--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCEEEccCCcCCeE--c--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 444455555555441 1 44455555555555555443 2 4455555555555555553 33 4455555555555
Q ss_pred CCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 161 YNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 161 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
+|+|++ +| ++.+++|+.|++++|++.+.++-..+++|+.|++++|++++. | ...+.++..+.+.+|
T Consensus 136 ~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N 201 (457)
T 3bz5_A 136 RNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTN 201 (457)
T ss_dssp TSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSS
T ss_pred CCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCC
Confidence 555554 22 444555555555555444444444555566666666666553 2 334444444544444
No 367
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.50 E-value=3.6e-14 Score=149.68 Aligned_cols=160 Identities=11% Similarity=0.063 Sum_probs=118.5
Q ss_pred ccccceEecC-----------CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--CCCCCCCCCE-Eec
Q 006031 70 CQWQGVICYQ-----------QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--DLSGLVNLKS-LFL 135 (664)
Q Consensus 70 C~w~gv~C~~-----------~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~~~l~~L~~-L~L 135 (664)
|+|+.|.|+. ..++.|+|++|.|+. +++..|.+|++|++|+|++|++.+.+| .|.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 7899999974 257889999999997 777789999999999999999988777 4788988775 777
Q ss_pred cCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcC-CcCccCCCCC--C-CCCCcEEEccCCccc
Q 006031 136 DHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDV-NRFNGSIPPL--N-QSSLKIFNVSGNNFT 211 (664)
Q Consensus 136 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~--~-~~~L~~l~l~~N~l~ 211 (664)
++|++++..|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+.. . ...|+.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 88999977788899999999999999999966665666666677777754 4454332221 2 235677777777777
Q ss_pred ccCCCCCcccccCcccccc
Q 006031 212 GAITVTSTLSRFGISSFLF 230 (664)
Q Consensus 212 g~~p~~~~l~~~~~~~~~~ 230 (664)
...+......++..+.+.+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~ 186 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSD 186 (350)
T ss_dssp EECTTSSTTEEEEEEECTT
T ss_pred CCChhhccccchhHHhhcc
Confidence 6555433333444444443
No 368
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.50 E-value=5.3e-14 Score=153.80 Aligned_cols=141 Identities=18% Similarity=0.074 Sum_probs=101.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|...+.+ .++.+++|+.|+|++|+|++ +| ++.+++|+.|+|++|++++. .++++++|++|+|
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~-l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD-VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC-CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec-cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 46778888888666654 47788888888888888887 44 77888888888888888854 3778888888888
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCC----------CCcEEEccCCcccccCCCCCcccccCccccc
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQS----------SLKIFNVSGNNFTGAITVTSTLSRFGISSFL 229 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~----------~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~ 229 (664)
++|+|++ +| +..+++|+.|+|++|++++.++ ..++ +|+.|++++|++.|.+|. ..+.++..+.+.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~-~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls 294 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV-STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA-EGCRKIKELDVT 294 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-TTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCCT
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-HHCCCCCEEeccCCCCCEEECCCCccCCcccc-cccccCCEEECC
Confidence 8888886 66 7778888888888888887543 2233 445556666666666662 445666666666
Q ss_pred cCCC
Q 006031 230 FNPS 233 (664)
Q Consensus 230 ~N~~ 233 (664)
+|+.
T Consensus 295 ~n~~ 298 (457)
T 3bz5_A 295 HNTQ 298 (457)
T ss_dssp TCTT
T ss_pred CCcc
Confidence 6653
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.50 E-value=5.9e-14 Score=147.61 Aligned_cols=144 Identities=20% Similarity=0.258 Sum_probs=86.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+.+. + .+..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|++|+|
T Consensus 177 ~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDI-S--PLASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCC-G--GGGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccc-c--cccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEEC
Confidence 4677778887777762 2 26666667777777776665544 6666666666666666663 333 666666666666
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC-CCCCCCcEEEccCCcccccCCC-CCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP-LNQSSLKIFNVSGNNFTGAITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~~L~~l~l~~N~l~g~~p~-~~~l~~~~~~~~~~N~ 232 (664)
++|++++ + ..+..+++|+.|++++|++++. |. ..+++|+.|++++|++++..|. ...+.++..+.+.+|+
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 6666664 3 3456666666666666666653 32 2455666666666666655442 1233444555555554
No 370
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=1.2e-13 Score=130.33 Aligned_cols=105 Identities=25% Similarity=0.270 Sum_probs=75.1
Q ss_pred EEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccC
Q 006031 83 VRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161 (664)
Q Consensus 83 ~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 161 (664)
+.+++++++|.. +|. .+. ++|+.|+|++|+|++.+| .|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~~-iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCSS-CCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCCc-cCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 467777777765 443 443 778888888888887776 477788888888888888854444467788888888888
Q ss_pred CcCcCCCchhhcCCCCCCeeeCcCCcCccC
Q 006031 162 NNLSGPLPKELASQGRLYSLRLDVNRFNGS 191 (664)
Q Consensus 162 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 191 (664)
|+|++..|..+..+++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 888754444577777777777777776643
No 371
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=6.2e-17 Score=156.45 Aligned_cols=132 Identities=23% Similarity=0.316 Sum_probs=113.0
Q ss_pred cEEEEEEcCCCCCCcCCC-----ccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCC
Q 006031 81 KVVRVVLQGLDLGGIFAP-----NSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLK 155 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p-----~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 155 (664)
.++.++|.++.+.|.+++ ..+.++++|++|+|++|+|++ +|.+.++++|++|+|++|+++ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 455566666677775432 278999999999999999998 668999999999999999999 8999888899999
Q ss_pred EEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCC--C-CCCCCCcEEEccCCcccccCCC
Q 006031 156 TLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIP--P-LNQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 156 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p--~-~~~~~L~~l~l~~N~l~g~~p~ 216 (664)
+|+|++|++++ +| .+..+++|+.|+|++|++++..+ . ..+++|+.|++++|.+++.+|.
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999999996 66 68899999999999999986433 2 3788999999999999998774
No 372
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.3e-13 Score=130.05 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=94.2
Q ss_pred CCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCC
Q 006031 107 LRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186 (664)
Q Consensus 107 L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 186 (664)
-+.+++++|+|+..++.+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3789999999975554554 89999999999999888999999999999999999999755556789999999999999
Q ss_pred cCccCCCC-C-CCCCCcEEEccCCcccccCCC
Q 006031 187 RFNGSIPP-L-NQSSLKIFNVSGNNFTGAITV 216 (664)
Q Consensus 187 ~l~g~~p~-~-~~~~L~~l~l~~N~l~g~~p~ 216 (664)
+|++.++. + .+++|+.|+|++|.|....+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99977765 2 689999999999999977653
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.48 E-value=8.8e-14 Score=152.61 Aligned_cols=144 Identities=28% Similarity=0.345 Sum_probs=100.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|.+|.+.+. ++ ++.+++|+.|+|++|++++ ++.+..+++|+.|+|++|.+++..| +..+++|++|+|
T Consensus 199 ~~L~~L~l~~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDI-TP--LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCC-GG--GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccc-cc--ccccCCCCEEECCCCCccc-chhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 4677777777777763 22 6677777777777777775 3567777777777777777775444 777777777777
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|++++. |. +..+++|+.|+|++|++++..|-..+++|+.|++++|++++..| ...+.++..+.+.+|.
T Consensus 273 ~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 273 GANQISNI-SP-LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCccCcc-cc-ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCc
Confidence 77777753 33 67777777777777777766554566777777777777777665 3455666666666663
No 374
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=2.8e-14 Score=134.90 Aligned_cols=128 Identities=18% Similarity=0.117 Sum_probs=103.8
Q ss_pred cccCCCCCCEEEecCCCCCCCCCCCCCCC-CCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCC
Q 006031 100 SLTKLDQLRVLGLQNNSLTGPIPDLSGLV-NLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRL 178 (664)
Q Consensus 100 ~l~~l~~L~~L~L~~N~l~g~~p~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 178 (664)
.+.++.+|+.|+|++|+++. +|.+..+. +|++|+|++|++++. ..+.++++|++|+|++|+|++..|..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 57788999999999999995 57787776 999999999999964 689999999999999999996544556999999
Q ss_pred CeeeCcCCcCccCCCC----CCCCCCcEEEccCCcccccCCC----CCcccccCccccccC
Q 006031 179 YSLRLDVNRFNGSIPP----LNQSSLKIFNVSGNNFTGAITV----TSTLSRFGISSFLFN 231 (664)
Q Consensus 179 ~~L~l~~N~l~g~~p~----~~~~~L~~l~l~~N~l~g~~p~----~~~l~~~~~~~~~~N 231 (664)
+.|+|++|+++. +|. ..+++|+.|++++|.++...+. ...+.++..+.+.+|
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEEC
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcC
Confidence 999999999964 443 2788999999999999865431 234445555555554
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.48 E-value=7.7e-14 Score=157.54 Aligned_cols=133 Identities=22% Similarity=0.267 Sum_probs=88.1
Q ss_pred CCCCCCCccccceE--------ecCCcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEe
Q 006031 63 QNKSLHFCQWQGVI--------CYQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLF 134 (664)
Q Consensus 63 ~~~~~~~C~w~gv~--------C~~~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~ 134 (664)
|....+||.|+|.. |....++.|++++++|+. +|. .+. ++|+.|+|++|+|++ +|. .+++|++|+
T Consensus 15 W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~-lp~-~l~--~~L~~L~L~~N~l~~-lp~--~l~~L~~L~ 87 (622)
T 3g06_A 15 WRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTT-LPD-CLP--AHITTLVIPDNNLTS-LPA--LPPELRTLE 87 (622)
T ss_dssp HHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSC-CCS-CCC--TTCSEEEECSCCCSC-CCC--CCTTCCEEE
T ss_pred HHhcCCcchhccccccCcccccccCCCCcEEEecCCCcCc-cCh-hhC--CCCcEEEecCCCCCC-CCC--cCCCCCEEE
Confidence 44457899997754 333568889999999884 544 454 788888888888885 443 567888888
Q ss_pred ccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCCCCCCCcEEEccCCcccc
Q 006031 135 LDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 135 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~l~~N~l~g 212 (664)
|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|++++
T Consensus 88 Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 88 VSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC
T ss_pred cCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC
Confidence 8888887 5666 56777777777777773 444 44556666666666654 232 12455555555555554
No 376
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.47 E-value=1.4e-15 Score=159.25 Aligned_cols=160 Identities=19% Similarity=0.206 Sum_probs=104.9
Q ss_pred CCccccceEecCCcEEEEEEcCCCCCCcCCCccccCC--CCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCC-C
Q 006031 68 HFCQWQGVICYQQKVVRVVLQGLDLGGIFAPNSLTKL--DQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGS-F 144 (664)
Q Consensus 68 ~~C~w~gv~C~~~~v~~l~l~~~~l~g~~~p~~l~~l--~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~-~ 144 (664)
-|..|.++.|+...+..++++++.+.. ..+..+ ++|+.|+|++|.+++.+|.+.++++|++|+|++|.+++. +
T Consensus 35 vc~~W~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASDESLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTCSTTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcCchhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHH
Confidence 345588888776667777777776652 345555 677777777777777777666777777777777777655 6
Q ss_pred cccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCC-cCccC-CCCC--CCCCCcEEEccCC-ccccc-CCC-C
Q 006031 145 PPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN-RFNGS-IPPL--NQSSLKIFNVSGN-NFTGA-ITV-T 217 (664)
Q Consensus 145 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~--~~~~L~~l~l~~N-~l~g~-~p~-~ 217 (664)
|..+.++++|++|+|++|++++.+|..++.+++|+.|+|++| .+++. +|.. .+++|+.|++++| ++++. ++. .
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 767777777777777777777777777777777777777777 56642 3331 4566777777777 66643 221 1
Q ss_pred Cccc-ccCccccccC
Q 006031 218 STLS-RFGISSFLFN 231 (664)
Q Consensus 218 ~~l~-~~~~~~~~~N 231 (664)
..+. ++..+.+.+|
T Consensus 191 ~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 191 AHVSETITQLNLSGY 205 (336)
T ss_dssp HHSCTTCCEEECCSC
T ss_pred HhcccCCCEEEeCCC
Confidence 2233 4445555544
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.47 E-value=9.1e-14 Score=146.13 Aligned_cols=144 Identities=22% Similarity=0.280 Sum_probs=124.9
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..+++.+|.+.+. + .+..+++|+.|+|++|++++..+ +..+++|+.|+|++|.+++ + +.+..+++|++|+|
T Consensus 199 ~~L~~L~l~~n~l~~~-~--~~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDI-T--PVANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCC-G--GGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCC-c--hhhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 5788999999999884 2 38999999999999999998766 8999999999999999995 4 46899999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccCCcccccCCCCCcccccCccccccCC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNP 232 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~ 232 (664)
++|++++ + ..+..+++|+.|+|++|++++..|.. .+++|+.|++++|++++.+| ...+.++..+.+.+|+
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 9999996 4 46889999999999999999877753 78899999999999999887 5667788888888875
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.47 E-value=3.9e-13 Score=146.82 Aligned_cols=117 Identities=26% Similarity=0.286 Sum_probs=69.6
Q ss_pred CCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCc
Q 006031 105 DQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLD 184 (664)
Q Consensus 105 ~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 184 (664)
++|++|+|++|++++ +|+|+++++|++|+|++|++++ +|..+ ++|++|+|++|++++ +| .++.+++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 456666666666665 4556666666666666666663 55433 356666666666664 55 46666666666666
Q ss_pred CCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 185 VNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 185 ~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
+|++++ +|.. ..+|+.|++++|+++ .+|....+.++..+.+.+|
T Consensus 204 ~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 204 NNSLKK-LPDL-PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp SSCCSS-CCCC-CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred CCcCCc-CCCC-cCcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 666665 3322 246666666666666 4454455555555555555
No 379
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.47 E-value=1.1e-13 Score=145.62 Aligned_cols=107 Identities=25% Similarity=0.258 Sum_probs=86.5
Q ss_pred ccccceEecCCcEEEEEEcCC-CCCCcCCCccccCCCCCCEEEecC-CCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcc
Q 006031 70 CQWQGVICYQQKVVRVVLQGL-DLGGIFAPNSLTKLDQLRVLGLQN-NSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPP 146 (664)
Q Consensus 70 C~w~gv~C~~~~v~~l~l~~~-~l~g~~~p~~l~~l~~L~~L~L~~-N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~ 146 (664)
|.|.+|.|+. + +|++ + |. |..+++|+.|+|++ |+|++.+| .|++|++|+.|+|++|+|+|..|.
T Consensus 8 C~~~~v~~~~----------~n~l~~-i-p~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTR----------DGALDS-L-HH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCS----------SCCCTT-T-TT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCC----------CCCCCc-c-CC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 8888888853 4 6776 5 44 99999999999996 99998886 588999999999999999988888
Q ss_pred cccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCcc
Q 006031 147 SLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNG 190 (664)
Q Consensus 147 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 190 (664)
.|.+|++|++|+|++|+|++..|..+..++ |+.|+|++|.|..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 889999999999999999854444455554 8888888887764
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.42 E-value=1.6e-12 Score=142.01 Aligned_cols=136 Identities=21% Similarity=0.228 Sum_probs=108.5
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
..+..|+|++|.+.+ ++ +++++++|++|+|++|++++ +|.. ..+|++|+|++|++++ +| .++++++|++|+|
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 478889999999988 54 69999999999999999997 5532 3599999999999996 77 6899999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccCCCCCcccccCccccccC
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFN 231 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N 231 (664)
++|++++ +|... ++|+.|++++|+++ .+|.. .+++|+.|++++|++++. | ..+.++..+.+.+|
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~l-~--~~~~~L~~L~l~~N 267 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKTL-P--DLPPSLEALNVRDN 267 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSSC-C--SCCTTCCEEECCSS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCcc-c--ccccccCEEECCCC
Confidence 9999985 66432 58889999999888 56654 678888999999988873 3 23355666666665
No 381
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=1.1e-12 Score=137.90 Aligned_cols=106 Identities=22% Similarity=0.220 Sum_probs=93.8
Q ss_pred CEEEecCC-CCCCCCCCCCCCCCCCEEeccC-CcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCcC
Q 006031 108 RVLGLQNN-SLTGPIPDLSGLVNLKSLFLDH-NFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDV 185 (664)
Q Consensus 108 ~~L~L~~N-~l~g~~p~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 185 (664)
..+++++| +|++.++ |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|+|..|..|.++++|+.|+|++
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 35799998 8998655 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred CcCccCCCCC-CCCCCcEEEccCCcccccC
Q 006031 186 NRFNGSIPPL-NQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 186 N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~ 214 (664)
|+|++.+|.. ....|+.|+|++|.|....
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 9999766653 3344999999999998653
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.34 E-value=6.1e-14 Score=146.73 Aligned_cols=153 Identities=19% Similarity=0.153 Sum_probs=121.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCC-CC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEE
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGP-IP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~-~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 157 (664)
..+..+++.++.+.+.. + .+.++++|++|+|++|.+++. +| .+.++++|++|+|++|.+++.+|..++++++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~-~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPL-A-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCC-C-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccc-h-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 57889999999999854 3 477899999999999998875 55 47889999999999999998899999999999999
Q ss_pred eccCC-cCcC-CCchhhcCCCCCCeeeCcCC-cCccC-CCCC--CCC-CCcEEEccCC--ccc-ccCCC-CCcccccCcc
Q 006031 158 DLSYN-NLSG-PLPKELASQGRLYSLRLDVN-RFNGS-IPPL--NQS-SLKIFNVSGN--NFT-GAITV-TSTLSRFGIS 226 (664)
Q Consensus 158 ~l~~N-~l~g-~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~--~~~-~L~~l~l~~N--~l~-g~~p~-~~~l~~~~~~ 226 (664)
+|++| .+++ .+|..+..+++|+.|+|++| ++++. ++.. .++ +|+.|++++| .++ +.+|. ...+.++..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 99999 7886 37778889999999999999 88864 3432 567 8999999998 455 33332 1345566667
Q ss_pred ccccCCCC
Q 006031 227 SFLFNPSL 234 (664)
Q Consensus 227 ~~~~N~~l 234 (664)
.+.+|..+
T Consensus 228 ~l~~~~~l 235 (336)
T 2ast_B 228 DLSDSVML 235 (336)
T ss_dssp ECTTCTTC
T ss_pred eCCCCCcC
Confidence 77776543
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.33 E-value=7.4e-12 Score=141.38 Aligned_cols=116 Identities=28% Similarity=0.243 Sum_probs=73.9
Q ss_pred CCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCCCeeeCc
Q 006031 105 DQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLD 184 (664)
Q Consensus 105 ~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 184 (664)
++|+.|+|++|+|++.++ .+++|+.|+|++|.++ .+|.. +++|++|+|++|+|++ +| ..+++|+.|+|+
T Consensus 181 ~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls 249 (622)
T 3g06_A 181 SGLQELSVSDNQLASLPT---LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVS 249 (622)
T ss_dssp TTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECC
T ss_pred CCCcEEECCCCCCCCCCC---ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECC
Confidence 445555555555554222 1245555555555555 34432 3678888888888884 66 456788888888
Q ss_pred CCcCccCCCCCCCCCCcEEEccCCcccccCCCCCcccccCccccccCCC
Q 006031 185 VNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPS 233 (664)
Q Consensus 185 ~N~l~g~~p~~~~~~L~~l~l~~N~l~g~~p~~~~l~~~~~~~~~~N~~ 233 (664)
+|+|++ +|. .+++|+.|+|++|+|+..++....+.++..+.+.+|+.
T Consensus 250 ~N~L~~-lp~-~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 250 GNRLTS-LPM-LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp SSCCSC-CCC-CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CCCCCc-CCc-ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 888884 554 67788888888888884433344556666677777754
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=1.6e-13 Score=146.72 Aligned_cols=155 Identities=19% Similarity=0.197 Sum_probs=124.4
Q ss_pred CCcEEEEEEcCCCCCCcC---CCccccCC---------CCCCEEEecCCCCC-CCCC----CCCCCCCCCEEeccCCcCC
Q 006031 79 QQKVVRVVLQGLDLGGIF---APNSLTKL---------DQLRVLGLQNNSLT-GPIP----DLSGLVNLKSLFLDHNFFT 141 (664)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~---~p~~l~~l---------~~L~~L~L~~N~l~-g~~p----~~~~l~~L~~L~L~~N~l~ 141 (664)
...+..|+|++|.+++.. .+..+..+ ++|++|+|++|+|+ +.+| .+..+++|+.|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 468999999999996421 13356666 89999999999998 5555 4667899999999999998
Q ss_pred --C---CCcccccCCCCCCEEeccCCcCc----CCCchhhcCCCCCCeeeCcCCcCccC----CCC----CCCCCCcEEE
Q 006031 142 --G---SFPPSLLSLHRLKTLDLSYNNLS----GPLPKELASQGRLYSLRLDVNRFNGS----IPP----LNQSSLKIFN 204 (664)
Q Consensus 142 --g---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~~N~l~g~----~p~----~~~~~L~~l~ 204 (664)
| .+|..+.++++|++|+|++|+|+ +.+|..+..+++|+.|+|++|++++. +|. ..+++|+.|+
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 45658899999999999999997 78999999999999999999999876 343 2478999999
Q ss_pred ccCCcccc----cCCCC--CcccccCccccccCCC
Q 006031 205 VSGNNFTG----AITVT--STLSRFGISSFLFNPS 233 (664)
Q Consensus 205 l~~N~l~g----~~p~~--~~l~~~~~~~~~~N~~ 233 (664)
|++|++++ .+|.. ..+.++..+.+.+|+.
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 99999998 35522 2246777777887753
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.29 E-value=1.8e-13 Score=146.25 Aligned_cols=152 Identities=20% Similarity=0.234 Sum_probs=85.0
Q ss_pred CcEEEEEEcCCCCCCcCC---CccccCCCCCCEEEecCC---CCCCCCCC--------CCCCCCCCEEeccCCcCCC---
Q 006031 80 QKVVRVVLQGLDLGGIFA---PNSLTKLDQLRVLGLQNN---SLTGPIPD--------LSGLVNLKSLFLDHNFFTG--- 142 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~---p~~l~~l~~L~~L~L~~N---~l~g~~p~--------~~~l~~L~~L~L~~N~l~g--- 142 (664)
..++.|+|++|.+++..+ +..+.++++|++|+|++| ++++.+|. +..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 346666666666655311 113556666777777664 34445541 3566667777777777665
Q ss_pred -CCcccccCCCCCCEEeccCCcCcCCCchhh----cCC---------CCCCeeeCcCCcCc-cCCCCC-----CCCCCcE
Q 006031 143 -SFPPSLLSLHRLKTLDLSYNNLSGPLPKEL----ASQ---------GRLYSLRLDVNRFN-GSIPPL-----NQSSLKI 202 (664)
Q Consensus 143 -~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~----~~l---------~~L~~L~l~~N~l~-g~~p~~-----~~~~L~~ 202 (664)
.+|..+.++++|++|+|++|+|++..+..+ ..+ ++|+.|+|++|+++ +.+|.. .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 366666666667777777766654333322 223 66666666666665 333321 4456666
Q ss_pred EEccCCccc--c---cCC-CCCcccccCccccccC
Q 006031 203 FNVSGNNFT--G---AIT-VTSTLSRFGISSFLFN 231 (664)
Q Consensus 203 l~l~~N~l~--g---~~p-~~~~l~~~~~~~~~~N 231 (664)
|+|++|+++ | .+| ....+.++..+.+.+|
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n 226 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN 226 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSS
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCC
Confidence 666666666 3 233 3334444555555554
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.27 E-value=5.5e-13 Score=141.22 Aligned_cols=107 Identities=24% Similarity=0.302 Sum_probs=49.7
Q ss_pred EEEEEEcCCCCCCcCCC----ccccCCC-CCCEEEecCCCCCCCCC-CCCCC-----CCCCEEeccCCcCCCCCcccccC
Q 006031 82 VVRVVLQGLDLGGIFAP----NSLTKLD-QLRVLGLQNNSLTGPIP-DLSGL-----VNLKSLFLDHNFFTGSFPPSLLS 150 (664)
Q Consensus 82 v~~l~l~~~~l~g~~~p----~~l~~l~-~L~~L~L~~N~l~g~~p-~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~ 150 (664)
++.|+|++|.+++ .++ ..+.+++ +|++|+|++|+|++..+ .+..+ ++|++|+|++|++++..+..++.
T Consensus 24 L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 24 VTSLDLSLNNLYS-ISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp CCEEECTTSCGGG-SCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceEEEccCCCCCh-HHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 4555555555544 222 2344444 55555555555554433 12221 45555555555555444443322
Q ss_pred C-----CCCCEEeccCCcCcCCCchhhcC-----CCCCCeeeCcCCcCc
Q 006031 151 L-----HRLKTLDLSYNNLSGPLPKELAS-----QGRLYSLRLDVNRFN 189 (664)
Q Consensus 151 l-----~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~ 189 (664)
. ++|++|+|++|+|++..+..+.. .++|+.|+|++|+++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 2 45555555555555444333222 235555555555554
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.27 E-value=1.5e-14 Score=139.51 Aligned_cols=129 Identities=22% Similarity=0.223 Sum_probs=110.1
Q ss_pred ccCCCCCCEEEecCCCCCCCCCC-------CCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhc
Q 006031 101 LTKLDQLRVLGLQNNSLTGPIPD-------LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELA 173 (664)
Q Consensus 101 l~~l~~L~~L~L~~N~l~g~~p~-------~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 173 (664)
+.....++.++|+.|.|+|.+|. +.++++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567889999999999999884 6779999999999999996 88 8999999999999999999 7999888
Q ss_pred CCCCCCeeeCcCCcCccCCCCC-CCCCCcEEEccCCcccccC--CCCCcccccCccccccCCC
Q 006031 174 SQGRLYSLRLDVNRFNGSIPPL-NQSSLKIFNVSGNNFTGAI--TVTSTLSRFGISSFLFNPS 233 (664)
Q Consensus 174 ~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~l~~N~l~g~~--p~~~~l~~~~~~~~~~N~~ 233 (664)
.+++|+.|+|++|++++. |.. .+++|+.|++++|++++.. +....+.++..+.+.+|+.
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred cCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 899999999999999974 433 6789999999999999643 2345667777888888854
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.27 E-value=1.1e-11 Score=130.64 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=86.0
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCE-EEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCC----
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRV-LGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHR---- 153 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~-L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---- 153 (664)
..++.|+|++|.+.+.+++..+.+|++|.. +++++|+|++..| .|.++++|++|++++|++++..+..+.+..+
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 578899999999888777777888888765 6667788988877 4788999999999999888544444444444
Q ss_pred ----------------------CCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC---CCCCCCcEEEccCC
Q 006031 154 ----------------------LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP---LNQSSLKIFNVSGN 208 (664)
Q Consensus 154 ----------------------L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~l~~N 208 (664)
|+.|+|++|+|+ .||.......+|+.|++++|+.-+.+|. ..+++|+.|||++|
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTS
T ss_pred hhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCC
Confidence 444555555554 3444444444555555543222223332 14455666666666
Q ss_pred cccccCC
Q 006031 209 NFTGAIT 215 (664)
Q Consensus 209 ~l~g~~p 215 (664)
+|+..++
T Consensus 213 ~l~~lp~ 219 (350)
T 4ay9_X 213 RIHSLPS 219 (350)
T ss_dssp CCCCCCS
T ss_pred CcCccCh
Confidence 6665443
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.24 E-value=1.2e-12 Score=138.55 Aligned_cols=147 Identities=19% Similarity=0.116 Sum_probs=115.7
Q ss_pred EEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-----CCCCCC-CCCEEeccCCcCCCCCcccccCC-----C
Q 006031 84 RVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-----DLSGLV-NLKSLFLDHNFFTGSFPPSLLSL-----H 152 (664)
Q Consensus 84 ~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-----~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~ 152 (664)
..+|+.++++|.+ |..+...++|++|+|++|+|++..+ .+.+++ +|+.|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~-~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPV-EEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHH-HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHH-HHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 3578899999965 4456666779999999999998775 467888 99999999999998888888876 9
Q ss_pred CCCEEeccCCcCcCCCchhhcC----C-CCCCeeeCcCCcCccCCCCC------C-CCCCcEEEccCCcccccCCCC---
Q 006031 153 RLKTLDLSYNNLSGPLPKELAS----Q-GRLYSLRLDVNRFNGSIPPL------N-QSSLKIFNVSGNNFTGAITVT--- 217 (664)
Q Consensus 153 ~L~~L~l~~N~l~g~~p~~~~~----l-~~L~~L~l~~N~l~g~~p~~------~-~~~L~~l~l~~N~l~g~~p~~--- 217 (664)
+|++|+|++|++++..+..+.. + ++|+.|+|++|++++..+.. . .++|+.|+|++|+++..-+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999999888876544 4 89999999999998766532 2 469999999999999532200
Q ss_pred --Ccc-cccCccccccC
Q 006031 218 --STL-SRFGISSFLFN 231 (664)
Q Consensus 218 --~~l-~~~~~~~~~~N 231 (664)
..+ .++..+.+.+|
T Consensus 161 ~l~~~~~~L~~L~Ls~n 177 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGN 177 (362)
T ss_dssp HHHTSCTTCCEEECTTS
T ss_pred HHhcCCccccEeeecCC
Confidence 111 25556666665
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=1.3e-10 Score=116.82 Aligned_cols=134 Identities=16% Similarity=0.037 Sum_probs=103.1
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEecCCceEEEEecCCCCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
..++.|+.+.||+.... +..+++|....... .....+.+|+++++.+. |..+.++++++.+.+..|+||||++|.+
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 35677788899999854 56899999864321 12235788888888774 6778889999988889999999999999
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA------------------------------------------ 506 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------ 506 (664)
|.+.+. +......++.+++++|+.||+.
T Consensus 97 l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 97 CSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp HHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred hhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 987641 1122457889999999999981
Q ss_pred ----------------CCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 507 ----------------WRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 507 ----------------~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
..++|+|+++.||+++++..+.|.||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 248999999999999876556799997654
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.03 E-value=9e-13 Score=132.06 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCccccceEecCC--cEEEEEEcC---CCCCCcCCCccccCCCCCCEEEecCCCCCCCCC--CCCCCCCCCE--EeccCC
Q 006031 68 HFCQWQGVICYQQ--KVVRVVLQG---LDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP--DLSGLVNLKS--LFLDHN 138 (664)
Q Consensus 68 ~~C~w~gv~C~~~--~v~~l~l~~---~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~~~l~~L~~--L~L~~N 138 (664)
..|+|.|+.|+.. +|+.+...+ ..+.|.+.|+.+..|+. .|....|..++.++ .|...+.|.. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 4689999999764 777666655 34455555544444433 23333333333332 2444445554 566666
Q ss_pred cCC---CCCcccccCCCCCCEEeccCCcCcC--CCchhhcCCCCCCeeeCcCCcCccCCCCCCCC--CCcEEEccCCccc
Q 006031 139 FFT---GSFPPSLLSLHRLKTLDLSYNNLSG--PLPKELASQGRLYSLRLDVNRFNGSIPPLNQS--SLKIFNVSGNNFT 211 (664)
Q Consensus 139 ~l~---g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~--~L~~l~l~~N~l~ 211 (664)
+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|.++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 432 2222222456777777777777776 55566667777777777777777641111222 7788888888887
Q ss_pred ccCC
Q 006031 212 GAIT 215 (664)
Q Consensus 212 g~~p 215 (664)
+.+|
T Consensus 234 ~~~~ 237 (267)
T 3rw6_A 234 DTFR 237 (267)
T ss_dssp GGCS
T ss_pred cccC
Confidence 7665
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.03 E-value=1.4e-11 Score=134.58 Aligned_cols=153 Identities=18% Similarity=0.162 Sum_probs=103.0
Q ss_pred CcEEEEEEcCCCCCCc----CCCccccCCCCCCEEEecCCCCCCC----CC-CCCCCCCCCEEeccCCcCCCCCcccccC
Q 006031 80 QKVVRVVLQGLDLGGI----FAPNSLTKLDQLRVLGLQNNSLTGP----IP-DLSGLVNLKSLFLDHNFFTGSFPPSLLS 150 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~----~~p~~l~~l~~L~~L~L~~N~l~g~----~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~ 150 (664)
..+..|+|++|.+++. +.+.....+++|++|+|++|++++. ++ .+.++++|+.|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 5778888888887652 1122234578888888888888763 33 4566788888888888887554444433
Q ss_pred -----CCCCCEEeccCCcCcCC----CchhhcCCCCCCeeeCcCCcCccCCCCC-------CCCCCcEEEccCCcccc--
Q 006031 151 -----LHRLKTLDLSYNNLSGP----LPKELASQGRLYSLRLDVNRFNGSIPPL-------NQSSLKIFNVSGNNFTG-- 212 (664)
Q Consensus 151 -----l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~-------~~~~L~~l~l~~N~l~g-- 212 (664)
.++|++|+|++|++++. +|..+..+++|+.|+|++|++++..+.. ..++|+.|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 26888888888888765 5666777788888888888877653321 25678888888888875
Q ss_pred --cCCC-CCcccccCccccccCC
Q 006031 213 --AITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 213 --~~p~-~~~l~~~~~~~~~~N~ 232 (664)
.+|. ...+.++..+.+.+|+
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHHhCCCccEEECCCCC
Confidence 4442 1234555666666664
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.99 E-value=6.7e-12 Score=137.08 Aligned_cols=152 Identities=19% Similarity=0.142 Sum_probs=117.3
Q ss_pred CcEEEEEEcCCCCCCc----CCCccccCCCCCCEEEecCCCCCCCC-----CC-CCCCCCCCEEeccCCcCCCC----Cc
Q 006031 80 QKVVRVVLQGLDLGGI----FAPNSLTKLDQLRVLGLQNNSLTGPI-----PD-LSGLVNLKSLFLDHNFFTGS----FP 145 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~----~~p~~l~~l~~L~~L~L~~N~l~g~~-----p~-~~~l~~L~~L~L~~N~l~g~----~p 145 (664)
..+..|+|++|.+++. + +..+..+++|++|+|++|.+++.. +. +..+++|+.|+|++|++++. +|
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l-~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDL-CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHH-HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHH-HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4899999999999873 2 346788999999999999987642 22 34689999999999999964 78
Q ss_pred ccccCCCCCCEEeccCCcCcCCCchhhcC-----CCCCCeeeCcCCcCccC----CCCC--CCCCCcEEEccCCcccccC
Q 006031 146 PSLLSLHRLKTLDLSYNNLSGPLPKELAS-----QGRLYSLRLDVNRFNGS----IPPL--NQSSLKIFNVSGNNFTGAI 214 (664)
Q Consensus 146 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~g~----~p~~--~~~~L~~l~l~~N~l~g~~ 214 (664)
..+.++++|++|+|++|++++..+..+.. .++|+.|+|++|++++. +|.. .+++|+.|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 88889999999999999998665555543 36999999999999875 2222 5689999999999998753
Q ss_pred CC-C-C----cccccCccccccCC
Q 006031 215 TV-T-S----TLSRFGISSFLFNP 232 (664)
Q Consensus 215 p~-~-~----~l~~~~~~~~~~N~ 232 (664)
+. . . ....+..+.+.+|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHHcCCCCceEEEECCCCC
Confidence 21 0 0 13466667777763
No 394
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=5.7e-10 Score=111.70 Aligned_cols=127 Identities=12% Similarity=0.086 Sum_probs=94.8
Q ss_pred cc-ccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCC--cccceEEEecCCceEEEEecCCCCC
Q 006031 392 LG-KGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN--LVPLRAYFQAKEERLLIYDYQPNGS 468 (664)
Q Consensus 392 lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~e~~~~gs 468 (664)
++ .|..+.||+....+|..+++|..... ....+.+|+++++.+++.+ +.+++++....+..++||||++|.+
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~ 101 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD 101 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcc
Confidence 44 55569999998877888999987543 1235778888888875545 4558888887778999999999988
Q ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 006031 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW----------------------------------------- 507 (664)
Q Consensus 469 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------------- 507 (664)
+. .. . . ....++.++++.|..||+..
T Consensus 102 l~--~~----~----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 102 LL--SS----H----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp TT--TS----C----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred cC--cC----c----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 74 21 0 1 12357778888888888641
Q ss_pred ----------------CcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 508 ----------------RLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 508 ----------------~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
.++|+|++|.||+++++..+.|.||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 29999999999999877666799998764
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=1.9e-09 Score=113.70 Aligned_cols=139 Identities=17% Similarity=0.261 Sum_probs=102.9
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEcc--CccccCCcHHHHHHHHHHHcCCC--CCCcccceEEEecC---CceEEEEe
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLD--ASKLAGTSNEMYEQHMESVGGLR--HPNLVPLRAYFQAK---EERLLIYD 462 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~--~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lV~e 462 (664)
+.++.|.++.||+....++ .+++|+.. .... ......+.+|+.+++.++ +..+.++++++.+. +..++|||
T Consensus 44 ~~l~~G~sn~~y~v~~~~~-~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPGQ-TYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EECCC-CCSCEEEEECSSC-EEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEcCCcccceEEEEEECCc-eEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4688999999999987664 67788765 3221 122456788888888886 45578888888766 45899999
Q ss_pred cCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------
Q 006031 463 YQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA------------------------------------ 506 (664)
Q Consensus 463 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 506 (664)
|++|..+.+.. ...++...+..++.++++.|+.||..
T Consensus 122 ~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 122 FVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp CCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred ecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99987764321 23467888899999999999999972
Q ss_pred ---------------------CCcccCCCCCCCeEeCCCCC--eEEeecccccc
Q 006031 507 ---------------------WRLVHGNLKSSNVLLGPDFE--ACLADYCLTAL 537 (664)
Q Consensus 507 ---------------------~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~ 537 (664)
..++|+|+++.||++++++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 35899999999999997754 58999998764
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.89 E-value=5e-11 Score=126.41 Aligned_cols=107 Identities=21% Similarity=0.139 Sum_probs=49.8
Q ss_pred CCCCEEEecCCCCCCCCC-CC-CCCCCCCEEeccCCcCCCCCcccc-----cCCCCCCEEeccCCcCcC----CCchhhc
Q 006031 105 DQLRVLGLQNNSLTGPIP-DL-SGLVNLKSLFLDHNFFTGSFPPSL-----LSLHRLKTLDLSYNNLSG----PLPKELA 173 (664)
Q Consensus 105 ~~L~~L~L~~N~l~g~~p-~~-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~l~~N~l~g----~~p~~~~ 173 (664)
++|+.|+|++|.|+.... .+ ..+++|+.|+|++|+|+..-...+ ...++|++|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 455555555555543211 11 124455555555555553322222 123455555555555542 2333344
Q ss_pred CCCCCCeeeCcCCcCccCC----CC--CCCCCCcEEEccCCccc
Q 006031 174 SQGRLYSLRLDVNRFNGSI----PP--LNQSSLKIFNVSGNNFT 211 (664)
Q Consensus 174 ~l~~L~~L~l~~N~l~g~~----p~--~~~~~L~~l~l~~N~l~ 211 (664)
.+++|++|+|++|++++.- +. ...++|+.|+|++|+|+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 5555555555555554311 00 02235555555555554
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.77 E-value=9.1e-11 Score=124.37 Aligned_cols=134 Identities=22% Similarity=0.215 Sum_probs=103.3
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CC-----CCCCCCCEEeccCCcCCC----CCccccc
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DL-----SGLVNLKSLFLDHNFFTG----SFPPSLL 149 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~-----~~l~~L~~L~L~~N~l~g----~~p~~~~ 149 (664)
..+..|+|++|.++..-...-...|++|+.|+|++|+|+.... .+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999998753112122346789999999999975433 12 356899999999999974 3566678
Q ss_pred CCCCCCEEeccCCcCcC----CCchhhcCCCCCCeeeCcCCcCccCCC----CC--CCCCCcEEEccCCccccc
Q 006031 150 SLHRLKTLDLSYNNLSG----PLPKELASQGRLYSLRLDVNRFNGSIP----PL--NQSSLKIFNVSGNNFTGA 213 (664)
Q Consensus 150 ~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p----~~--~~~~L~~l~l~~N~l~g~ 213 (664)
.+++|++|||++|+|+. .++..+..+++|+.|+|++|+++..-. .. ..++|+.|||++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 89999999999999984 346677888999999999999975321 11 457899999999998754
No 398
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.64 E-value=1.5e-09 Score=122.37 Aligned_cols=131 Identities=12% Similarity=0.090 Sum_probs=68.7
Q ss_pred cCCCCCCEEEecCCCCCCCCC-CCCC-CCCCCEEecc----CCcCCCC-----CcccccCCCCCCEEeccC--CcCcCCC
Q 006031 102 TKLDQLRVLGLQNNSLTGPIP-DLSG-LVNLKSLFLD----HNFFTGS-----FPPSLLSLHRLKTLDLSY--NNLSGPL 168 (664)
Q Consensus 102 ~~l~~L~~L~L~~N~l~g~~p-~~~~-l~~L~~L~L~----~N~l~g~-----~p~~~~~l~~L~~L~l~~--N~l~g~~ 168 (664)
..+++|++|+|+.|++++..+ .++. +++|+.|+|+ .|++++. ++..+.++++|++|+|++ |.+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 346666777776666665433 2333 5666666664 5566542 333355566666666653 2355444
Q ss_pred chhhcC-CCCCCeeeCcCCcCccC-CCC--CCCCCCcEEEccCCccccc-CCC-CCcccccCccccccCC
Q 006031 169 PKELAS-QGRLYSLRLDVNRFNGS-IPP--LNQSSLKIFNVSGNNFTGA-ITV-TSTLSRFGISSFLFNP 232 (664)
Q Consensus 169 p~~~~~-l~~L~~L~l~~N~l~g~-~p~--~~~~~L~~l~l~~N~l~g~-~p~-~~~l~~~~~~~~~~N~ 232 (664)
+..+.. +++|+.|+|++|++++. ++. ..+++|+.|+|++|.|++. ++. ...+.++..+.+.+|.
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 444433 56666666666666542 221 2455666666666665533 111 1223444555555554
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=1.2e-09 Score=109.27 Aligned_cols=92 Identities=24% Similarity=0.227 Sum_probs=60.3
Q ss_pred cccCCCCCCE--EEecCCCCC---CCCCC-CCCCCCCCEEeccCCcCCC--CCcccccCCCCCCEEeccCCcCcCCCchh
Q 006031 100 SLTKLDQLRV--LGLQNNSLT---GPIPD-LSGLVNLKSLFLDHNFFTG--SFPPSLLSLHRLKTLDLSYNNLSGPLPKE 171 (664)
Q Consensus 100 ~l~~l~~L~~--L~L~~N~l~---g~~p~-~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 171 (664)
.+...+.|.. ++++.|... +.++. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 136 ~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 136 GLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp TGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred HcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 3444555555 666777432 21111 1357778888888888886 5566777788888888888888754 33
Q ss_pred hcCCC--CCCeeeCcCCcCccCCC
Q 006031 172 LASQG--RLYSLRLDVNRFNGSIP 193 (664)
Q Consensus 172 ~~~l~--~L~~L~l~~N~l~g~~p 193 (664)
+..+. +|+.|+|++|.+++.+|
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhhcccCCcceEEccCCcCccccC
Confidence 44444 78888888888887766
No 400
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.63 E-value=8.6e-09 Score=106.02 Aligned_cols=180 Identities=17% Similarity=0.111 Sum_probs=116.8
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCC--cccceEEEecCC---ceEEEEec
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPN--LVPLRAYFQAKE---ERLLIYDY 463 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~e~ 463 (664)
+.++.|.+..||+.. ..+++|..... .....+.+|.++++.+. +.. +.+++.+....+ ..|+||||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 458899999999863 45788875432 23467889999988773 333 334444433332 34789999
Q ss_pred CCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 006031 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA------------------------------------- 506 (664)
Q Consensus 464 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------- 506 (664)
++|.++.+... ..++..++..++.++++.|+.||+.
T Consensus 98 i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 98 IKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99988865332 2356667777888888888888751
Q ss_pred --------------------CCcccCCCCCCCeEeCC--CCCeEEeeccccccccCCC----CCCC---CCC--------
Q 006031 507 --------------------WRLVHGNLKSSNVLLGP--DFEACLADYCLTALTADSL----QDDD---PDN-------- 549 (664)
Q Consensus 507 --------------------~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~----~~~~---~~~-------- 549 (664)
+.++|+|+++.||++++ +..+.|.||+.+....... .... .+.
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 13799999999999998 4567899999886543211 0000 000
Q ss_pred -CcccC-ccccccCCCCCchhhHHHHHHHHHHHHcCCCCC
Q 006031 550 -LLYKA-PETRNASHQATSKSDVYSFGVLLLELLTGKPPS 587 (664)
Q Consensus 550 -~~y~a-PE~~~~~~~~~~ksDVwSfGvvl~elltG~~P~ 587 (664)
.++.. |+... ......+.|++|.++|++.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~---r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLE---KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHH---HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHH---HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00111 22211 1122368999999999999998875
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=1.7e-07 Score=97.38 Aligned_cols=38 Identities=13% Similarity=0.334 Sum_probs=27.6
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTG 119 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g 119 (664)
..++.|+|++ ++.. +++..|.++++|+.|+|++|.+..
T Consensus 101 ~~L~~l~L~~-~i~~-I~~~aF~~~~~L~~l~l~~n~i~~ 138 (329)
T 3sb4_A 101 QTLEKVILSE-KIKN-IEDAAFKGCDNLKICQIRKKTAPN 138 (329)
T ss_dssp TTCCC-CBCT-TCCE-ECTTTTTTCTTCCEEEBCCSSCCE
T ss_pred CCCcEEECCc-cccc-hhHHHhhcCcccceEEcCCCCccc
Confidence 4577777777 6665 666678888888888888887653
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=1.5e-08 Score=96.17 Aligned_cols=112 Identities=19% Similarity=0.188 Sum_probs=77.8
Q ss_pred cccCCCCCCEEEecCC-CCCCCC-----CCCCCCCCCCEEeccCCcCCCC----CcccccCCCCCCEEeccCCcCcCC--
Q 006031 100 SLTKLDQLRVLGLQNN-SLTGPI-----PDLSGLVNLKSLFLDHNFFTGS----FPPSLLSLHRLKTLDLSYNNLSGP-- 167 (664)
Q Consensus 100 ~l~~l~~L~~L~L~~N-~l~g~~-----p~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~-- 167 (664)
.+...+.|++|+|++| .|...- ..+...++|++|+|++|+++.. +...+...++|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4566778888888888 775321 1355677888888888888642 344455667888888888888743
Q ss_pred --CchhhcCCCCCCeeeC--cCCcCccCCCC------CCCCCCcEEEccCCccc
Q 006031 168 --LPKELASQGRLYSLRL--DVNRFNGSIPP------LNQSSLKIFNVSGNNFT 211 (664)
Q Consensus 168 --~p~~~~~l~~L~~L~l--~~N~l~g~~p~------~~~~~L~~l~l~~N~l~ 211 (664)
+...+...++|+.|+| ++|.++..--. ...+.|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4556777788888888 77887643111 03467888888888875
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=4e-07 Score=94.56 Aligned_cols=77 Identities=10% Similarity=0.091 Sum_probs=52.4
Q ss_pred CcEEEEEEcCCCCCC-------------------cCCCccccC--------CCCCCEEEecCCCCCCCCC-CCCCCCCCC
Q 006031 80 QKVVRVVLQGLDLGG-------------------IFAPNSLTK--------LDQLRVLGLQNNSLTGPIP-DLSGLVNLK 131 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g-------------------~~~p~~l~~--------l~~L~~L~L~~N~l~g~~p-~~~~l~~L~ 131 (664)
.+++.|+|++|.+.. .+++..|.+ +++|+.|+|.+ +++...+ .|.+|++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 456777777776660 245567778 99999999999 8876555 599999999
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEE
Q 006031 132 SLFLDHNFFTGSFPPSLLSLHRLKTL 157 (664)
Q Consensus 132 ~L~L~~N~l~g~~p~~~~~l~~L~~L 157 (664)
.|+|++|.++..-+..|.++.++..|
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l 153 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFI 153 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEe
Confidence 99999998753333333333333333
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.40 E-value=2.4e-08 Score=112.35 Aligned_cols=126 Identities=15% Similarity=0.193 Sum_probs=73.2
Q ss_pred CcEEEEEEcCCCCCCcCCCccccCC--CCCCEEEecCCC-CCC-CCCC-CCCCCCCCEEeccCCcCCCC----CcccccC
Q 006031 80 QKVVRVVLQGLDLGGIFAPNSLTKL--DQLRVLGLQNNS-LTG-PIPD-LSGLVNLKSLFLDHNFFTGS----FPPSLLS 150 (664)
Q Consensus 80 ~~v~~l~l~~~~l~g~~~p~~l~~l--~~L~~L~L~~N~-l~g-~~p~-~~~l~~L~~L~L~~N~l~g~----~p~~~~~ 150 (664)
..++.|+|+++.+++.. +..++.+ .+|++|+|++|. ++. .++. ..++++|++|+|++|.+++. ++..+.+
T Consensus 112 ~~L~~L~L~~~~i~~~~-~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~ 190 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLD-LDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH 190 (592)
T ss_dssp TTCCEEEEESCBCCHHH-HHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH
T ss_pred CCCCeEEeeccEecHHH-HHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc
Confidence 56888888888776532 2234442 337777777765 110 0111 23566777777777776655 4444556
Q ss_pred CCCCCEEeccCCcCc----CCCchhhcCCCCCCeeeCcCCcCccCCCCC--CCCCCcEEEccC
Q 006031 151 LHRLKTLDLSYNNLS----GPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSG 207 (664)
Q Consensus 151 l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l~~ 207 (664)
+++|++|+|++|+++ +.++..+.++++|+.|+|++|.+.+ +|.. .+++|+.|+++.
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 677777777777776 3344445566777777777776665 2221 445555555553
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.38 E-value=7.6e-07 Score=92.11 Aligned_cols=130 Identities=16% Similarity=0.100 Sum_probs=93.7
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCC---C-CcccceEEEecCCceEEEEecCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH---P-NLVPLRAYFQAKEERLLIYDYQP 465 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~g~~~~~~~~~lV~e~~~ 465 (664)
+.++.|....||+. +..+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++||||++
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~----~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~ 110 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS----VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK 110 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH----HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH----HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence 56889999999998 5567888764321 23568889988877765 1 23445544 56789999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW-------------------------------------- 507 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------- 507 (664)
|.++..... ..++..++..++.++++.|+.||+..
T Consensus 111 G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 111 GERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred Ccccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 988864331 23566666777778888888777421
Q ss_pred ------------------------CcccCCCCCCCeEeCCCCCeEEeeccccccc
Q 006031 508 ------------------------RLVHGNLKSSNVLLGPDFEACLADYCLTALT 538 (664)
Q Consensus 508 ------------------------~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 538 (664)
.++|+|+++.||+++++..+.|.||+.+...
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 2489999999999998666799999987643
No 406
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.32 E-value=2.4e-08 Score=112.45 Aligned_cols=128 Identities=13% Similarity=0.068 Sum_probs=67.2
Q ss_pred CCCCCEEEecCCCCCCCCC-CCC-CCCCCCEEecc--C----CcCCCC-----CcccccCCCCCCEEeccCCcCcCCCch
Q 006031 104 LDQLRVLGLQNNSLTGPIP-DLS-GLVNLKSLFLD--H----NFFTGS-----FPPSLLSLHRLKTLDLSYNNLSGPLPK 170 (664)
Q Consensus 104 l~~L~~L~L~~N~l~g~~p-~~~-~l~~L~~L~L~--~----N~l~g~-----~p~~~~~l~~L~~L~l~~N~l~g~~p~ 170 (664)
+++|+.|+++.|++++..+ .+. ++++|+.|+|+ + |++++. ++..+.++++|+.|+|++ ++++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 5666666666666655432 222 35666666666 3 444411 112245566666666655 55544444
Q ss_pred hhcC-CCCCCeeeCcCCcCccCCCC---CCCCCCcEEEccCCcccccCC--CCCcccccCccccccCC
Q 006031 171 ELAS-QGRLYSLRLDVNRFNGSIPP---LNQSSLKIFNVSGNNFTGAIT--VTSTLSRFGISSFLFNP 232 (664)
Q Consensus 171 ~~~~-l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~l~~N~l~g~~p--~~~~l~~~~~~~~~~N~ 232 (664)
.++. +++|+.|+|++|.+++..+. ..+++|+.|+|++|.+++... ....+.++..+.+.+|+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 4544 66666666666666543221 135566666666666643321 11234455555555543
No 407
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=2.2e-06 Score=87.16 Aligned_cols=74 Identities=12% Similarity=0.146 Sum_probs=59.0
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCC---CcccceEEEecCCceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP---NLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
+.|+.|.++.||++...+|..+++|+..... ......|..|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 5689999999999999999999999964322 12346789999999999875 467777753 46999999999
Q ss_pred CCH
Q 006031 467 GSL 469 (664)
Q Consensus 467 gsL 469 (664)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.19 E-value=1.3e-07 Score=89.63 Aligned_cols=110 Identities=18% Similarity=0.240 Sum_probs=86.5
Q ss_pred CCcEEEEEEcCC-CCCCc----CCCccccCCCCCCEEEecCCCCCCCCC-----CCCCCCCCCEEeccCCcCCCC----C
Q 006031 79 QQKVVRVVLQGL-DLGGI----FAPNSLTKLDQLRVLGLQNNSLTGPIP-----DLSGLVNLKSLFLDHNFFTGS----F 144 (664)
Q Consensus 79 ~~~v~~l~l~~~-~l~g~----~~p~~l~~l~~L~~L~L~~N~l~g~~p-----~~~~l~~L~~L~L~~N~l~g~----~ 144 (664)
...++.|+|++| .++.. + ...+...++|++|+|++|+|...-- .+...++|++|+|++|.++.. +
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l-~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKAC-AEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHH-HHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHH-HHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 357899999999 88641 2 2256778999999999999864211 245568899999999999853 5
Q ss_pred cccccCCCCCCEEec--cCCcCcCC----CchhhcCCCCCCeeeCcCCcCc
Q 006031 145 PPSLLSLHRLKTLDL--SYNNLSGP----LPKELASQGRLYSLRLDVNRFN 189 (664)
Q Consensus 145 p~~~~~l~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 189 (664)
...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 677888899999999 88999843 4455667799999999999875
No 409
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.15 E-value=9.2e-06 Score=83.34 Aligned_cols=133 Identities=14% Similarity=0.048 Sum_probs=89.3
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCC---CcccceEEEe-cCCceEEEEecCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP---NLVPLRAYFQ-AKEERLLIYDYQP 465 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~e~~~ 465 (664)
+.++.|....||+. +..+++|.-... .....+.+|.++|+.+.+. .+.+.+.++. ..+..++||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 45788888899987 456778874221 2346788999999988653 2555666664 4556789999999
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA--------------------------------------- 506 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------------------- 506 (664)
|..+.+... ..++...+..++.++++.|+.||+.
T Consensus 97 G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 97 GQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp SEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 988866321 1133344444455555555444431
Q ss_pred --------------------CCcccCCCCCCCeEeCC---CCCe-EEeecccccc
Q 006031 507 --------------------WRLVHGNLKSSNVLLGP---DFEA-CLADYCLTAL 537 (664)
Q Consensus 507 --------------------~~ivHrDlk~~NILl~~---~~~~-ki~DfGla~~ 537 (664)
+.++|+|+++.||++++ ++.+ .|.||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 14599999999999987 4554 7999987654
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.15 E-value=6e-07 Score=94.30 Aligned_cols=111 Identities=18% Similarity=0.102 Sum_probs=60.5
Q ss_pred cccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCccccc--CCCCCCEEeccC--CcCcCC-----Cch
Q 006031 100 SLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLL--SLHRLKTLDLSY--NNLSGP-----LPK 170 (664)
Q Consensus 100 ~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~ 170 (664)
.+..+++|+.|+|++|.-. .+|.+. +++|+.|+|..|.++...-..+. .+++|+.|+|+. |...|. +-.
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGKKP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCSCB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HHhcCCCCcEEEEeCCCCc-eecccc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 3455677777777766211 223332 66777777776666543333343 567777777652 222111 111
Q ss_pred hh--cCCCCCCeeeCcCCcCccCCCC-----CCCCCCcEEEccCCcccc
Q 006031 171 EL--ASQGRLYSLRLDVNRFNGSIPP-----LNQSSLKIFNVSGNNFTG 212 (664)
Q Consensus 171 ~~--~~l~~L~~L~l~~N~l~g~~p~-----~~~~~L~~l~l~~N~l~g 212 (664)
.+ ..+++|+.|+|++|++++..+. ..+++|+.|+|++|.|++
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 12 2356777777777766543221 135667777777777765
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.14 E-value=1.8e-07 Score=105.20 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=62.3
Q ss_pred CCCCCCEEEecCCCCCCCCC-CCC-CCCCCCEEeccCC-cCCCC-CcccccCCCCCCEEeccCCcCcCCCchhhc----C
Q 006031 103 KLDQLRVLGLQNNSLTGPIP-DLS-GLVNLKSLFLDHN-FFTGS-FPPSLLSLHRLKTLDLSYNNLSGPLPKELA----S 174 (664)
Q Consensus 103 ~l~~L~~L~L~~N~l~g~~p-~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~----~ 174 (664)
.+++|+.|+|++|.+++..+ .+. ++++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 46677777777776665443 233 4667777777776 44422 444444677777777777776655444443 4
Q ss_pred CCCCCeeeCcCCcCccCCCC-------CCCCCCcEEEccCC
Q 006031 175 QGRLYSLRLDVNRFNGSIPP-------LNQSSLKIFNVSGN 208 (664)
Q Consensus 175 l~~L~~L~l~~N~l~g~~p~-------~~~~~L~~l~l~~N 208 (664)
+++|+.|+|++|. +.+.. ..+++|+.|+|++|
T Consensus 183 ~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 183 YTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 5577777777765 22221 13467777777776
No 412
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.08 E-value=1.1e-05 Score=80.97 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=91.0
Q ss_pred cccccCce-eEEEEEEc-CCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC-CCCcccceEEEecCCceEEEEecCCCC
Q 006031 391 LLGKGSLG-TTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR-HPNLVPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 391 ~lG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~g 467 (664)
.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 34556555 68987754 5667888876432 3456788888887764 333667889998889999999999998
Q ss_pred CHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 006031 468 SLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ------------------------------------------ 505 (664)
Q Consensus 468 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~------------------------------------------ 505 (664)
++.+.... .......+..++++.|.-||.
T Consensus 106 ~~~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 106 TAFQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EHHHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred cccccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 87765421 112233455555555555552
Q ss_pred ---------c------CCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 506 ---------A------WRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 506 ---------~------~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
. +.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 027899999999999987777799997664
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.07 E-value=9e-07 Score=92.94 Aligned_cols=129 Identities=17% Similarity=0.208 Sum_probs=92.0
Q ss_pred CcEEEEEEcCCC-CCCcCCCccccCCCCCCEEEecCCCCCCCCC-CC--CCCCCCCEEeccC--CcCCCC-----Ccccc
Q 006031 80 QKVVRVVLQGLD-LGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DL--SGLVNLKSLFLDH--NFFTGS-----FPPSL 148 (664)
Q Consensus 80 ~~v~~l~l~~~~-l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~--~~l~~L~~L~L~~--N~l~g~-----~p~~~ 148 (664)
..+..|+|.++. + .+++ +. +++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +-..+
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 579999998873 2 2333 43 8999999999888754221 23 3689999999864 332222 11223
Q ss_pred --cCCCCCCEEeccCCcCcCCCchhhc---CCCCCCeeeCcCCcCccC----CCCC--CCCCCcEEEccCCccccc
Q 006031 149 --LSLHRLKTLDLSYNNLSGPLPKELA---SQGRLYSLRLDVNRFNGS----IPPL--NQSSLKIFNVSGNNFTGA 213 (664)
Q Consensus 149 --~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~g~----~p~~--~~~~L~~l~l~~N~l~g~ 213 (664)
..+++|++|+|++|.+++..+..+. .+++|+.|+|+.|++++. ++.. .+++|+.|+|++|.++..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 3589999999999999866555554 478999999999999863 2221 568999999999988743
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=1.4e-05 Score=84.03 Aligned_cols=141 Identities=11% Similarity=0.100 Sum_probs=87.1
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCC--cccceEEEecC-CceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN--LVPLRAYFQAK-EERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lV~e~~~~ 466 (664)
+.++.|....+|+... ++..+++|..... ..+.+|..++..+.... +.++++++... +..++||||++|
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 4578899999999876 5678888876421 25788888887776543 45677776654 568999999997
Q ss_pred CCHHH------------------HhccCCCCC---------CC---CCCHHHH---------------------HHHHHH
Q 006031 467 GSLFS------------------LIHGSKSTR---------AK---PLHWTSC---------------------LKIAED 495 (664)
Q Consensus 467 gsL~~------------------~l~~~~~~~---------~~---~l~~~~~---------------------~~i~~~ 495 (664)
.++.+ .||...... .. .-.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 65531 122211000 00 0011111 111122
Q ss_pred HHHHHHHHHhc---CCcccCCCCCCCeEeCCCCCeEEeeccccccc
Q 006031 496 VAQGLSYIHQA---WRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538 (664)
Q Consensus 496 ia~~L~yLH~~---~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 538 (664)
+..-++++... +.++|+|+++.||+++++..+.|.||+.+...
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22223333222 35899999999999987777889999887653
No 415
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.87 E-value=1.1e-05 Score=84.44 Aligned_cols=81 Identities=9% Similarity=-0.032 Sum_probs=52.6
Q ss_pred ccc-cccCceeEEEEEEc-------CCeEEEEEEccCccc-cCCcHHHHHHHHHHHcCCC-C--CCcccceEEEecC---
Q 006031 390 ELL-GKGSLGTTYKAVLD-------NRLIVCVKRLDASKL-AGTSNEMYEQHMESVGGLR-H--PNLVPLRAYFQAK--- 454 (664)
Q Consensus 390 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~-H--~niv~l~g~~~~~--- 454 (664)
+.| +.|....+|+.... ++..+++|....... .......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998765 266788887654320 0001234667777777664 2 2466778777654
Q ss_pred CceEEEEecCCCCCHH
Q 006031 455 EERLLIYDYQPNGSLF 470 (664)
Q Consensus 455 ~~~~lV~e~~~~gsL~ 470 (664)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999886653
No 416
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.75 E-value=0.00012 Score=75.79 Aligned_cols=140 Identities=18% Similarity=0.262 Sum_probs=77.8
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCC-----CCCCcccce-E--EEecCCceEEEE
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL-----RHPNLVPLR-A--YFQAKEERLLIY 461 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lV~ 461 (664)
+.|+.|..+.||+....+|. +++|+.... ......|..++..+ ..|.++... | +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 34666778899999877664 888988642 22333344444333 334444311 1 123456789999
Q ss_pred ecCCCCCHH--------------HHhccCCC-C--C------CCCCCHHHHH----------------------------
Q 006031 462 DYQPNGSLF--------------SLIHGSKS-T--R------AKPLHWTSCL---------------------------- 490 (664)
Q Consensus 462 e~~~~gsL~--------------~~l~~~~~-~--~------~~~l~~~~~~---------------------------- 490 (664)
||++|..+. ..+|.... . . ...-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 12221100 0 0 0112343211
Q ss_pred ---HHHHHHHHHHHHHHh------------cCCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 491 ---KIAEDVAQGLSYIHQ------------AWRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 491 ---~i~~~ia~~L~yLH~------------~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
.+...+..++++|++ ...++|+|+++.||+++.++.+.|.||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111224446677763 2479999999999999888899999997653
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.61 E-value=0.00025 Score=75.45 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=39.6
Q ss_pred EEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccC
Q 006031 82 VVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161 (664)
Q Consensus 82 v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 161 (664)
++.+.|++ .+.. +.+..|.++++|+.++|++|+++.........++|+.+.|.+| ++-.-...|.++++|+.|+|.+
T Consensus 159 L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQ-LKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCE-ECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccE-ehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 45555553 3433 4455667777777777777766644332222355555555532 4322223344555555555544
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.53 E-value=0.00025 Score=75.31 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=47.0
Q ss_pred ccccccCceeEEEEEEc-CCeEEEEEEccCccc--c---CCcHHHHHHHHHHHcCCCC--CCcc-cceEEEecCCceEEE
Q 006031 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKL--A---GTSNEMYEQHMESVGGLRH--PNLV-PLRAYFQAKEERLLI 460 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~---~~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~lV 460 (664)
+.||.|.++.||++... ++..+++|....... . ....+.+..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 467899997643211 0 1123445677777766532 3333 45543 34567899
Q ss_pred EecCCCC
Q 006031 461 YDYQPNG 467 (664)
Q Consensus 461 ~e~~~~g 467 (664)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00025 Score=71.68 Aligned_cols=74 Identities=12% Similarity=0.175 Sum_probs=52.9
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCC---CcccceEEEecCCceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP---NLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
+.+|.|..+.||+.++.+|+.|++|+-..... .....|+.|...|+.+.-. -+.+++++ +..++||||+++
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~ 94 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence 45899999999999999999999998654322 3345788898888777422 23444443 234789999987
Q ss_pred CCH
Q 006031 467 GSL 469 (664)
Q Consensus 467 gsL 469 (664)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 420
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.48 E-value=0.00035 Score=74.37 Aligned_cols=127 Identities=13% Similarity=0.145 Sum_probs=90.9
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCC-----CCCcccccCCCCC
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFT-----GSFPPSLLSLHRL 154 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~-----g~~p~~~~~l~~L 154 (664)
.+..|+|+++ +.. +....|.+ .+|+.+.| .|+++...+ .|.++++|+.|+|.+|.+. ..-+..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~~-I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VST-IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCE-ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccC-cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 5666777653 433 55556777 78999999 455654433 6889999999999988875 2334567889999
Q ss_pred CEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCC--C-CCCCCcEEEccCCcccccCC
Q 006031 155 KTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--L-NQSSLKIFNVSGNNFTGAIT 215 (664)
Q Consensus 155 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~-~~~~L~~l~l~~N~l~g~~p 215 (664)
+.++|. |+++-.-...|.+|++|+.++|..| ++ .|+. + ++ +|+.+++++|.+....+
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~~l~~ 362 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPPQVFE 362 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCCBCCC
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCccccc
Confidence 999998 4577334457888999999999665 54 3333 2 56 89999999998765443
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.001 Score=58.64 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=15.6
Q ss_pred CCCEEeccCCcCcCCCchhhcCCCCCCeeeCcCCcC
Q 006031 153 RLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRF 188 (664)
Q Consensus 153 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 188 (664)
+|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344444444444422222334444444444444433
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.02 E-value=0.00013 Score=67.60 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=44.6
Q ss_pred CCCEEEecCCCCCCC-CCCCCCCCCCCEEeccCCc-CCCCCcccccCC----CCCCEEeccCC-cCcCCCchhhcCCCCC
Q 006031 106 QLRVLGLQNNSLTGP-IPDLSGLVNLKSLFLDHNF-FTGSFPPSLLSL----HRLKTLDLSYN-NLSGPLPKELASQGRL 178 (664)
Q Consensus 106 ~L~~L~L~~N~l~g~-~p~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~l~~N-~l~g~~p~~~~~l~~L 178 (664)
.|+.|||+++.++.. +..+.++++|+.|+|+++. ++..-=..|..+ ++|++|+|+++ ++|..==..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 466677776665432 2345566677777777664 543322334443 35777777665 3552212345556666
Q ss_pred CeeeCcCC
Q 006031 179 YSLRLDVN 186 (664)
Q Consensus 179 ~~L~l~~N 186 (664)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.02 E-value=0.0024 Score=65.23 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=89.0
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCC---CCCcccceEEEecCCceEEEEecCCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR---HPNLVPLRAYFQAKEERLLIYDYQPN 466 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~ 466 (664)
+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45889999999998864 557788876432 3567888988887773 35677888888878889999999998
Q ss_pred CCHH-----------HHhccCCC-CCC----------------CCCCHHHHH---HHHHH----------------HHH-
Q 006031 467 GSLF-----------SLIHGSKS-TRA----------------KPLHWTSCL---KIAED----------------VAQ- 498 (664)
Q Consensus 467 gsL~-----------~~l~~~~~-~~~----------------~~l~~~~~~---~i~~~----------------ia~- 498 (664)
..+. ..||.... ... -.-+|.... ++..+ +..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 13343211 000 012454321 11111 111
Q ss_pred HHHHHHh---cCCcccCCCCCCCeEeCCCCCeEEeec
Q 006031 499 GLSYIHQ---AWRLVHGNLKSSNVLLGPDFEACLADY 532 (664)
Q Consensus 499 ~L~yLH~---~~~ivHrDlk~~NILl~~~~~~ki~Df 532 (664)
....|.. .+.++|+|+.+.||+++.++ +.|.|+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~ 231 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNP 231 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcC
Confidence 1223421 34699999999999999887 888887
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.98 E-value=0.0023 Score=68.33 Aligned_cols=75 Identities=15% Similarity=0.111 Sum_probs=45.8
Q ss_pred CcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCC-CC--CCCcccCccccccC--CCCCchhhHHHHHHHHHHHHc
Q 006031 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD-DP--DNLLYKAPETRNAS--HQATSKSDVYSFGVLLLELLT 582 (664)
Q Consensus 508 ~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~-~~--~~~~y~aPE~~~~~--~~~~~ksDVwSfGvvl~ellt 582 (664)
.++|+|+++.|||+++++ ++|.||+.+........-. .. -...|.+|+..... .......++......+|+.++
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 311 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFN 311 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 799999999999998876 9999998876543211000 00 01235566544211 111223556678888888776
Q ss_pred C
Q 006031 583 G 583 (664)
Q Consensus 583 G 583 (664)
+
T Consensus 312 ~ 312 (420)
T 2pyw_A 312 K 312 (420)
T ss_dssp H
T ss_pred H
Confidence 4
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.80 E-value=0.0021 Score=56.48 Aligned_cols=37 Identities=30% Similarity=0.250 Sum_probs=23.5
Q ss_pred CCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 006031 129 NLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLS 165 (664)
Q Consensus 129 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 165 (664)
+|+.|+|++|+|+..-+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666677777766333334566777777777777653
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.72 E-value=0.01 Score=60.75 Aligned_cols=141 Identities=11% Similarity=0.080 Sum_probs=78.5
Q ss_pred cccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCC--CcccceEE-----EecCCceEEEEec
Q 006031 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP--NLVPLRAY-----FQAKEERLLIYDY 463 (664)
Q Consensus 391 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~g~-----~~~~~~~~lV~e~ 463 (664)
.++ |....||+....+|..+++|...... ...+.+..|..++..+... .+.+++.. ....+..++||+|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 355 77789999887777778999885322 2345666677776655322 23344432 1224556889999
Q ss_pred CCCCCHH-----H---------HhccC----CCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHHh-
Q 006031 464 QPNGSLF-----S---------LIHGS----KSTRAKPLHWTSC----LKI---------------AEDVAQGLSYIHQ- 505 (664)
Q Consensus 464 ~~~gsL~-----~---------~l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~~L~yLH~- 505 (664)
++|..+. . .+|.. .......+++... ..+ ...+.+.++.+.+
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875431 1 12210 0001112222211 001 1111122333322
Q ss_pred -----cCCcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 506 -----AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 506 -----~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
...++|+|+++.||+++ + .+.|.||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 12589999999999999 4 899999977654
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.64 E-value=0.0003 Score=66.43 Aligned_cols=85 Identities=12% Similarity=0.164 Sum_probs=49.6
Q ss_pred cCCCCCCEEEecCC-CCCCC----C-CCCCCCCCCCEEeccCCcCCCC----CcccccCCCCCCEEeccCCcCcCC----
Q 006031 102 TKLDQLRVLGLQNN-SLTGP----I-PDLSGLVNLKSLFLDHNFFTGS----FPPSLLSLHRLKTLDLSYNNLSGP---- 167 (664)
Q Consensus 102 ~~l~~L~~L~L~~N-~l~g~----~-p~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~---- 167 (664)
.+-+.|+.|+|++| +|... + ..+..-+.|+.|+|++|++... |-..+..-+.|++|+|++|+|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34567778888775 55321 0 1244456777788888777632 333344456777777777777632
Q ss_pred CchhhcCCCCCCeeeCcCC
Q 006031 168 LPKELASQGRLYSLRLDVN 186 (664)
Q Consensus 168 ~p~~~~~l~~L~~L~l~~N 186 (664)
|-..+..-+.|+.|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 2223444556777777654
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.61 E-value=0.0054 Score=62.19 Aligned_cols=137 Identities=9% Similarity=0.056 Sum_probs=71.1
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEEEEecC-CCC
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLLIYDYQ-PNG 467 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~e~~-~~g 467 (664)
+.|+.|....+|+. ..+++|+........ ....+|...++.+....+ .+++++ +.+..++|+||+ ++.
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 46888999999998 457788765421111 112456666655533233 345543 344567899999 554
Q ss_pred CHHH------------------HhccCCCCCCCCCCH-HHHHHHHH--------------HHHHHHH----HHHh---cC
Q 006031 468 SLFS------------------LIHGSKSTRAKPLHW-TSCLKIAE--------------DVAQGLS----YIHQ---AW 507 (664)
Q Consensus 468 sL~~------------------~l~~~~~~~~~~l~~-~~~~~i~~--------------~ia~~L~----yLH~---~~ 507 (664)
++.. .+|............ .....+.. .+.+.+. .+.. ..
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 4321 223221111111111 11111111 1111111 1211 12
Q ss_pred CcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 508 RLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 508 ~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
.++|+|+.+.||+ .+++.+.+.||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 4899999999999 5667889999977654
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.49 E-value=0.008 Score=61.39 Aligned_cols=142 Identities=10% Similarity=0.103 Sum_probs=75.9
Q ss_pred ccccccCceeEEEEEEcCCeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCC--cccceEE------EecCCceEEEE
Q 006031 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN--LVPLRAY------FQAKEERLLIY 461 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~------~~~~~~~~lV~ 461 (664)
+.|+.|....+|+....++ .+++|...... ..+.+..|+.++..+.... +.+++.. ....+..++++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~ 102 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI 102 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence 3467788889999987776 57788875421 1223445565555443211 2223221 12235678999
Q ss_pred ecCCCCCHH--------------HHhccCC-C--CCC----CCCCHHHHHH------------HHHHHHHHHHHHHhc--
Q 006031 462 DYQPNGSLF--------------SLIHGSK-S--TRA----KPLHWTSCLK------------IAEDVAQGLSYIHQA-- 506 (664)
Q Consensus 462 e~~~~gsL~--------------~~l~~~~-~--~~~----~~l~~~~~~~------------i~~~ia~~L~yLH~~-- 506 (664)
+|++|..+. ..+|... . ... ....|..... +...+.+.++++++.
T Consensus 103 ~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~ 182 (322)
T 2ppq_A 103 SFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWP 182 (322)
T ss_dssp ECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCC
T ss_pred EeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCc
Confidence 999886431 1122110 0 000 0112332111 111244556666532
Q ss_pred ----CCcccCCCCCCCeEeCCCCCeEEeeccccc
Q 006031 507 ----WRLVHGNLKSSNVLLGPDFEACLADYCLTA 536 (664)
Q Consensus 507 ----~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 536 (664)
..++|+|+.+.||+++++..+.|.||+.+.
T Consensus 183 ~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 183 KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 268999999999999987556899997654
No 430
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.31 E-value=0.0084 Score=62.91 Aligned_cols=140 Identities=15% Similarity=0.182 Sum_probs=80.9
Q ss_pred ccccccCceeEEEEEEcC--------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEEE
Q 006031 390 ELLGKGSLGTTYKAVLDN--------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLLI 460 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV 460 (664)
+.|..|-...+|+....+ +..+++|+.... ......+.+|.++++.+.-.++ .++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 346677778899988652 467888885321 1234566688888877743333 456666543 299
Q ss_pred EecCCCCCHHH-----------------HhccCCCCCCCCCC--HHHHHHHHHHHH-------------------HHHHH
Q 006031 461 YDYQPNGSLFS-----------------LIHGSKSTRAKPLH--WTSCLKIAEDVA-------------------QGLSY 502 (664)
Q Consensus 461 ~e~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------------------~~L~y 502 (664)
+||++|..|.. .||........... |.+..++..++. ..+.+
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 99999755421 22332211122222 455555554432 22344
Q ss_pred HHh----c---CCcccCCCCCCCeEeCCC----CCeEEeeccccc
Q 006031 503 IHQ----A---WRLVHGNLKSSNVLLGPD----FEACLADYCLTA 536 (664)
Q Consensus 503 LH~----~---~~ivHrDlk~~NILl~~~----~~~ki~DfGla~ 536 (664)
|.+ . ..++|+|+.+.||+++++ +.+.+.||..+.
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 432 1 158999999999999876 789999997664
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.21 E-value=0.001 Score=61.51 Aligned_cols=82 Identities=9% Similarity=0.049 Sum_probs=60.2
Q ss_pred CCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCc-CcCCCchhhcCC----CCCCeeeCcCCc-CccC--CCCCCCCC
Q 006031 128 VNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNN-LSGPLPKELASQ----GRLYSLRLDVNR-FNGS--IPPLNQSS 199 (664)
Q Consensus 128 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~--~p~~~~~~ 199 (664)
-+|+.|||+++.++..=-..+.++++|++|+|+++. ++..-=..+..+ ++|++|+|+++. +|.. ..-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886545667899999999999985 664322345554 479999999974 6531 11125789
Q ss_pred CcEEEccCCc
Q 006031 200 LKIFNVSGNN 209 (664)
Q Consensus 200 L~~l~l~~N~ 209 (664)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999998764
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.12 E-value=0.022 Score=58.48 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=26.7
Q ss_pred CcccCCCCCCCeEeCCC----CCeEEeeccccccc
Q 006031 508 RLVHGNLKSSNVLLGPD----FEACLADYCLTALT 538 (664)
Q Consensus 508 ~ivHrDlk~~NILl~~~----~~~ki~DfGla~~~ 538 (664)
.++|+|+.+.||+++.+ ..+.|.||+.+...
T Consensus 184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 68999999999999875 67899999877643
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.99 E-value=0.022 Score=60.87 Aligned_cols=71 Identities=13% Similarity=0.077 Sum_probs=46.6
Q ss_pred ccccccCceeEEEEEEcC--------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEEE
Q 006031 390 ELLGKGSLGTTYKAVLDN--------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLLI 460 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV 460 (664)
+.|+.|....+|+....+ +..+++|+.... ...+.+..|..+++.+...++ .++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 357788889999998753 467888887321 122445578888777743344 456665532 389
Q ss_pred EecCCCCC
Q 006031 461 YDYQPNGS 468 (664)
Q Consensus 461 ~e~~~~gs 468 (664)
+||+++.+
T Consensus 151 ~e~l~G~~ 158 (429)
T 1nw1_A 151 EEYIPSRP 158 (429)
T ss_dssp ECCCCEEE
T ss_pred EEEeCCcc
Confidence 99998633
No 434
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.77 E-value=0.023 Score=59.91 Aligned_cols=108 Identities=15% Similarity=0.217 Sum_probs=73.4
Q ss_pred CccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCc-ccccCCCCCCEEeccCCcCcCCCchhhcCCC
Q 006031 98 PNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFP-PSLLSLHRLKTLDLSYNNLSGPLPKELASQG 176 (664)
Q Consensus 98 p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 176 (664)
...+.++..|+.+.+.++-.+-.--.|.++++|+.+++. +.++ .|+ ..|.++.+|+.++|..| ++-.-..+|.+|+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccceecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 346778888888888765543222257788888888886 4455 344 45677888888888754 5522235678888
Q ss_pred CCCeeeCcCCcCccCCCC---CCCCCCcEEEccCCcc
Q 006031 177 RLYSLRLDVNRFNGSIPP---LNQSSLKIFNVSGNNF 210 (664)
Q Consensus 177 ~L~~L~l~~N~l~g~~p~---~~~~~L~~l~l~~N~l 210 (664)
+|+.+.|..+ ++ .|.. .++++|+.+++.+|..
T Consensus 335 ~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 335 QLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 8888888654 44 4443 2778888888887754
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.63 E-value=0.065 Score=50.91 Aligned_cols=100 Identities=13% Similarity=0.080 Sum_probs=66.0
Q ss_pred CCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCeEeCCCCCeEEeeccccccccCCCCCC
Q 006031 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD 545 (664)
Q Consensus 466 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~ 545 (664)
.-+|.++|.. ...++++.+.+.++.|.+++|.-+-....-..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 32 ~vSL~eIL~~----~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 32 ALSLEEILRL----YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cccHHHHHHH----cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------
Confidence 4489999973 4578999999999999999987762110111233346899999999998764 1110
Q ss_pred CCCCCcccCccccccCCCCCchhhHHHHHHHHHHHHc
Q 006031 546 DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT 582 (664)
Q Consensus 546 ~~~~~~y~aPE~~~~~~~~~~ksDVwSfGvvl~ellt 582 (664)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY--SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS--SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc--ccchHHHHHHHHHHHHHHHhh
Confidence 1223467888763 455788999999999999887
No 436
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.57 E-value=0.042 Score=57.88 Aligned_cols=81 Identities=14% Similarity=0.185 Sum_probs=51.9
Q ss_pred CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCc-hhhcCCCCCCeeeCcCCcCccCCCCC---CCC
Q 006031 123 DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLP-KELASQGRLYSLRLDVNRFNGSIPPL---NQS 198 (664)
Q Consensus 123 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~ 198 (664)
.|.++++|+.+.+.++..+ .-...|.++++|+.+.+. +.++ .|+ ..|.++++|+.++|..| ++ .|... ++.
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~ 334 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCE 334 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCC
Confidence 4677788888887665443 334456777888888885 4455 333 46777888888887654 33 33331 567
Q ss_pred CCcEEEccCC
Q 006031 199 SLKIFNVSGN 208 (664)
Q Consensus 199 ~L~~l~l~~N 208 (664)
+|+.+.+..|
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 7888877543
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.54 E-value=0.0044 Score=58.42 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=60.1
Q ss_pred CCCCCCCEEeccCC-cCCC----CCcccccCCCCCCEEeccCCcCcC----CCchhhcCCCCCCeeeCcCCcCccCCCC-
Q 006031 125 SGLVNLKSLFLDHN-FFTG----SFPPSLLSLHRLKTLDLSYNNLSG----PLPKELASQGRLYSLRLDVNRFNGSIPP- 194 (664)
Q Consensus 125 ~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p~- 194 (664)
.+-+.|+.|+|++| ++.. .+-..+..-+.|+.|+|++|+|.. .|-..+..-+.|+.|+|++|+++..--.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34578999999986 7752 144456667889999999999972 2344566678899999999998732110
Q ss_pred -----CCCCCCcEEEccCC
Q 006031 195 -----LNQSSLKIFNVSGN 208 (664)
Q Consensus 195 -----~~~~~L~~l~l~~N 208 (664)
...+.|+.|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 13356999999865
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.31 E-value=0.095 Score=56.36 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=44.8
Q ss_pred ccccccCceeEEEEEEcC-CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEEEEecCCCC
Q 006031 390 ELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLLIYDYQPNG 467 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~e~~~~g 467 (664)
+.|+.|-...+|+....+ +..+++|+...... ......+|..++..+...++ .++++++. + .+|+||+++.
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~---~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD---EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC---SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh---hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 457788889999998776 46788887643211 11112567777777755455 45677662 2 3599999874
Q ss_pred CH
Q 006031 468 SL 469 (664)
Q Consensus 468 sL 469 (664)
+|
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 439
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.91 E-value=0.11 Score=54.19 Aligned_cols=72 Identities=11% Similarity=0.007 Sum_probs=40.6
Q ss_pred ccccccCceeEEEEEEcC---------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEE
Q 006031 390 ELLGKGSLGTTYKAVLDN---------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLL 459 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~l 459 (664)
+.++.|....+|+....+ +..+++|+....... ......|.++++.+...++ .++++.. .-++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~---~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE---LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG---TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc---eecHHHHHHHHHHHHhcCCCCceEEec----CCcE
Confidence 356778888999988754 257888876532211 1123566666666643333 3565543 2378
Q ss_pred EEecCCCCC
Q 006031 460 IYDYQPNGS 468 (664)
Q Consensus 460 V~e~~~~gs 468 (664)
||||++|..
T Consensus 112 v~e~i~G~~ 120 (369)
T 3c5i_A 112 IEEWLYGDP 120 (369)
T ss_dssp EEECCCSEE
T ss_pred EEEEecCCc
Confidence 999998754
No 440
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.74 E-value=0.021 Score=38.97 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=10.7
Q ss_pred eehhhHH-HHHHHHHHHHHHHHHHHHh
Q 006031 292 IIGFSSG-VLVLICSLVLFAMAVKKQK 317 (664)
Q Consensus 292 ii~i~vg-~~vl~~~v~~~~~~~~~~~ 317 (664)
|++.++| ++++++++++++++++||+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 4444444 4444444333333444433
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.70 E-value=0.067 Score=55.81 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=48.4
Q ss_pred cccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhcCCCCC
Q 006031 100 SLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRL 178 (664)
Q Consensus 100 ~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 178 (664)
.+....+|+.+.+..+ +..... .+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ ++..-...|..+++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3445556666665443 221111 3555566666666544 33122233445555666555433 331122344555566
Q ss_pred CeeeCcCCcCccCCCCC---CCCCCcEEEcc
Q 006031 179 YSLRLDVNRFNGSIPPL---NQSSLKIFNVS 206 (664)
Q Consensus 179 ~~L~l~~N~l~g~~p~~---~~~~L~~l~l~ 206 (664)
+.+.+.+|.++ .|+.. ++.+|+.++|.
T Consensus 289 ~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 289 TKVVMDNSAIE-TLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CEEEECCTTCC-EECTTTTTTCTTCCEEECC
T ss_pred ccccccccccc-eehhhhhcCCCCCCEEEcC
Confidence 66665555554 22221 44555555554
No 442
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.69 E-value=0.047 Score=37.35 Aligned_cols=27 Identities=11% Similarity=0.172 Sum_probs=11.3
Q ss_pred eehhhH-HHHHHHHHHHHHHHHHHHHhc
Q 006031 292 IIGFSS-GVLVLICSLVLFAMAVKKQKQ 318 (664)
Q Consensus 292 ii~i~v-g~~vl~~~v~~~~~~~~~~~~ 318 (664)
|++.++ |++++++++++++++++||++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 444444 444444444333344444433
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.64 E-value=0.095 Score=55.08 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=45.3
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEecc
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLS 160 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 160 (664)
.+..+.+... +. .+....+..+..|+.+.+..|..+-....|.++..|+.+.+..+.+. ...+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---cccccccccccccccc
Confidence 4555555432 21 13334566777777777776654322223455555555555443321 1223444555555554
Q ss_pred CCcCcCCCchhhcCCCCCCeeeCc
Q 006031 161 YNNLSGPLPKELASQGRLYSLRLD 184 (664)
Q Consensus 161 ~N~l~g~~p~~~~~l~~L~~L~l~ 184 (664)
+| ++..=..+|.++++|+.++|.
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCC
T ss_pred cc-cceechhhhcCCCCCCEEEeC
Confidence 33 331112234445555555543
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.61 E-value=0.088 Score=54.92 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=81.3
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCC-CCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEec
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 159 (664)
.+..+.+..+ +.. +....+.++..|+.+.+..+ ++..-. .|.++.+|+.+.+..+ ++-.-...|.++++|+.+++
T Consensus 218 ~l~~i~~~~~-~~~-i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTT-LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCE-ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeE-EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 3444555432 222 33457788899999999765 443333 5788999999999754 55223345778999999999
Q ss_pred cCCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEcc
Q 006031 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVS 206 (664)
Q Consensus 160 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~ 206 (664)
.+|.++-.=...|.++++|+.+.|..| ++ .|... ++++|+.+.+.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 998887333457889999999999755 43 34432 66777777653
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.33 E-value=0.027 Score=37.36 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=20.9
Q ss_pred CCccceeeehhhHHHHHHHHHHHHHHHHHHHH
Q 006031 285 SHKKTAVIIGFSSGVLVLICSLVLFAMAVKKQ 316 (664)
Q Consensus 285 ~~~~~~~ii~i~vg~~vl~~~v~~~~~~~~~~ 316 (664)
+....+.|+++++|+++.+++++.+.++++||
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34456788899998877666555555544443
No 446
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=94.28 E-value=0.047 Score=37.17 Aligned_cols=28 Identities=25% Similarity=0.520 Sum_probs=12.9
Q ss_pred eeeehhhHHHHHHHHHHHHHHHHHHHHh
Q 006031 290 AVIIGFSSGVLVLICSLVLFAMAVKKQK 317 (664)
Q Consensus 290 ~~ii~i~vg~~vl~~~v~~~~~~~~~~~ 317 (664)
..|+++++|+++++++.+.++++.+||+
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhh
Confidence 3466667774433333333333334433
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.91 E-value=0.081 Score=55.61 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=84.7
Q ss_pred cEEEEEEcCCCCCCcCCCccccCCCCCCEEEecCCCCCCCCCCCCCCCCCCEEeccCCcCCCCCcccccCCCCCCEEecc
Q 006031 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLS 160 (664)
Q Consensus 81 ~v~~l~l~~~~l~g~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 160 (664)
.+..+.+..+... +....+..+..|+.+.+..+.+.. ..|.++.+|+.+.+..| ++-.-...|.++++|+.++|.
T Consensus 254 ~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce--eeccccccccccceeccCceeecc--ccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 4556666655432 345578888999999887664211 14788999999999765 552234567889999999997
Q ss_pred CCcCcCCCchhhcCCCCCCeeeCcCCcCccCCCCC---CCCCCcEEEccCC
Q 006031 161 YNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL---NQSSLKIFNVSGN 208 (664)
Q Consensus 161 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~l~~N 208 (664)
++ ++-.=..+|.+|++|+.+.|..| ++ .|+.. ++.+|+.+++..|
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 54 66223457889999999999877 54 44442 7789999988644
No 448
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.80 E-value=0.17 Score=52.03 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=26.8
Q ss_pred CcccCCCCCCCeEeCCCCCeEEeecccccc
Q 006031 508 RLVHGNLKSSNVLLGPDFEACLADYCLTAL 537 (664)
Q Consensus 508 ~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 537 (664)
.++|+|+.+.||++++++.+.|.||+.+..
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 689999999999999888899999977654
No 449
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.01 E-value=0.25 Score=51.89 Aligned_cols=142 Identities=16% Similarity=0.147 Sum_probs=77.3
Q ss_pred cccccCceeEEEEEEcC--------CeEEEEEEccCcccc---------CCcH-------HHHHHHHHHHcCCCCCC-cc
Q 006031 391 LLGKGSLGTTYKAVLDN--------RLIVCVKRLDASKLA---------GTSN-------EMYEQHMESVGGLRHPN-LV 445 (664)
Q Consensus 391 ~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~---------~~~~-------~~~~~e~~~l~~l~H~n-iv 445 (664)
.|..|-...+|+...++ ...|.++..-..... .... +....|..+++.+...+ ..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45567777889888654 256777775332110 0001 12234777777664333 44
Q ss_pred cceEEEecCCceEEEEecCCCCCHHH-----------------HhccCCCCCCCCCC--HHHHHHHHHHHH---------
Q 006031 446 PLRAYFQAKEERLLIYDYQPNGSLFS-----------------LIHGSKSTRAKPLH--WTSCLKIAEDVA--------- 497 (664)
Q Consensus 446 ~l~g~~~~~~~~~lV~e~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia--------- 497 (664)
++++++.+ .+|+||+++-+|.. .+|........... |....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 56776542 28999998644411 12332111122233 334444443321
Q ss_pred -------------HHHHH----HHhc---CCcccCCCCCCCeEeCCC------CCeEEeeccccc
Q 006031 498 -------------QGLSY----IHQA---WRLVHGNLKSSNVLLGPD------FEACLADYCLTA 536 (664)
Q Consensus 498 -------------~~L~y----LH~~---~~ivHrDlk~~NILl~~~------~~~ki~DfGla~ 536 (664)
.-+.. |... ..++|+|+.+.||+++++ +.+.+.||..+.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 12222 2221 158999999999999876 789999996553
No 450
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.15 E-value=2.8 Score=44.22 Aligned_cols=73 Identities=11% Similarity=0.019 Sum_probs=43.7
Q ss_pred ccccccCceeEEEEEEcC--------CeEEEEEEccCccccCCcHHHHHHHHHHHcCCCCCCc-ccceEEEecCCceEEE
Q 006031 390 ELLGKGSLGTTYKAVLDN--------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL-VPLRAYFQAKEERLLI 460 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV 460 (664)
+.+..|-...+|+....+ +..+++|+...... ..-...+|..+++.+...++ .++++.+. -++|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~---~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG---KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc---hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEE
Confidence 346677778999988763 46788888643221 11123456666665532233 34555332 3789
Q ss_pred EecCCCCCH
Q 006031 461 YDYQPNGSL 469 (664)
Q Consensus 461 ~e~~~~gsL 469 (664)
+||++|..|
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998653
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.04 E-value=0.075 Score=57.27 Aligned_cols=60 Identities=8% Similarity=0.026 Sum_probs=16.5
Q ss_pred ccccccCceeEEEEEEcC-CeEEEE------EEccCccccCCcHHHHHHHHHHHcCCCCCCcccceEEEe
Q 006031 390 ELLGKGSLGTTYKAVLDN-RLIVCV------KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQ 452 (664)
Q Consensus 390 ~~lG~G~fg~Vy~~~~~~-~~~vav------K~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 452 (664)
+.|| ||.||+|.+.. ..+||| |..+...........|.+|..++..++|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4566 99999999865 467888 776554443344456888889999999999999988753
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.27 E-value=4.4 Score=38.34 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=78.5
Q ss_pred CCCCcccceEEEecCCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCcccCCCCCCC
Q 006031 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS-YIHQAWRLVHGNLKSSN 518 (664)
Q Consensus 440 ~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~ivHrDlk~~N 518 (664)
.||++ -...-.+.+...+.|+.-+++.=+..++ .++...+++++..|+.... +++ .-+|--|.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~---~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA---RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS---SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh---CceeEEEeCce
Confidence 67877 3344466677777787665554455553 3678889999999888766 555 34777889999
Q ss_pred eEeCCCCCeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHH-HHHHHHHHHHcCCCCCC
Q 006031 519 VLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY-SFGVLLLELLTGKPPSQ 588 (664)
Q Consensus 519 ILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVw-SfGvvl~elltG~~P~~ 588 (664)
|++|.++.+++.-.|+-.. ++|.-+ ...|.| .+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~---------------lpP~e~-------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES---------------LPPDEW-------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT---------------BSSCSC-------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc---------------CCCCCC-------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987776432 233322 123444 46778888888887764
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.88 E-value=2.7 Score=39.66 Aligned_cols=115 Identities=12% Similarity=0.134 Sum_probs=78.1
Q ss_pred CCCCcccceEEEecCCceEEEEecCCCCCHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCe
Q 006031 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNV 519 (664)
Q Consensus 440 ~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ivHrDlk~~NI 519 (664)
.||+.+.. ..-.+.+...+.|+.-+.+.=+..+ ..++...+++++..|+....+++. -+|--|.|+||
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i--------k~~~~~eKlr~l~ni~~l~~~~~~---r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI--------KSFTKNEKLRYLLNIKNLEEVNRT---RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG--------GGSCHHHHHHHHHHGGGGGGGGGS---SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH--------HhcCHHHHHHHHHHHHHHHHHhcC---ceEEEEecceE
Confidence 68888866 4445556666666654433222223 347788999999999988766653 37788999999
Q ss_pred EeCCCCCeEEeeccccccccCCCCCCCCCCCcccCccccccCCCCCchhhHH-HHHHHHHHHHcCCCCCC
Q 006031 520 LLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY-SFGVLLLELLTGKPPSQ 588 (664)
Q Consensus 520 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ksDVw-SfGvvl~elltG~~P~~ 588 (664)
+++.++.+++.-.|+-..+ +|.- .+ ..|.| .+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l---------------~P~~------~~-ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV---------------DPLP------VS-EAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB---------------SCCC------CC-HHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC---------------CCCC------CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877754322 2221 11 23333 57788899999998875
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=65.75 E-value=0.95 Score=30.40 Aligned_cols=8 Identities=38% Similarity=0.588 Sum_probs=3.1
Q ss_pred ehhhHHHH
Q 006031 293 IGFSSGVL 300 (664)
Q Consensus 293 i~i~vg~~ 300 (664)
+++++|++
T Consensus 17 ~~vv~Gv~ 24 (41)
T 2k9y_A 17 GGVAVGVV 24 (41)
T ss_dssp HHHHHHHH
T ss_pred eehhHHHH
Confidence 33333433
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=60.80 E-value=3.9 Score=25.99 Aligned_cols=26 Identities=27% Similarity=0.346 Sum_probs=17.0
Q ss_pred ceeeehhhHHHHHHHHHHHHHHHHHH
Q 006031 289 TAVIIGFSSGVLVLICSLVLFAMAVK 314 (664)
Q Consensus 289 ~~~ii~i~vg~~vl~~~v~~~~~~~~ 314 (664)
.+.++|+++|.++..+++++.+|++.
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhee
Confidence 35677888887777666666555543
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=58.12 E-value=2.1 Score=27.53 Aligned_cols=7 Identities=43% Similarity=0.520 Sum_probs=3.2
Q ss_pred eehhhHH
Q 006031 292 IIGFSSG 298 (664)
Q Consensus 292 ii~i~vg 298 (664)
|++.++|
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3444445
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=52.04 E-value=11 Score=26.69 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=10.6
Q ss_pred eehhhHHHHHHHHHHHHHHHHHHHHhc
Q 006031 292 IIGFSSGVLVLICSLVLFAMAVKKQKQ 318 (664)
Q Consensus 292 ii~i~vg~~vl~~~v~~~~~~~~~~~~ 318 (664)
+++++.|.+++++++++++-+-..+|+
T Consensus 13 i~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 13 LLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 334444444444433333333333333
No 458
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=48.75 E-value=6.9 Score=40.82 Aligned_cols=29 Identities=21% Similarity=0.410 Sum_probs=23.8
Q ss_pred cccCCCCCCCeEe------CCCCCeEEeecccccc
Q 006031 509 LVHGNLKSSNVLL------GPDFEACLADYCLTAL 537 (664)
Q Consensus 509 ivHrDlk~~NILl------~~~~~~ki~DfGla~~ 537 (664)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567789999976643
No 459
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=42.75 E-value=17 Score=25.91 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=8.0
Q ss_pred eeee-hhhHHHHHHHHHHHHH
Q 006031 290 AVII-GFSSGVLVLICSLVLF 309 (664)
Q Consensus 290 ~~ii-~i~vg~~vl~~~v~~~ 309 (664)
++|+ +++.|.++++++++++
T Consensus 13 wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 4444 3344444444333333
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=42.73 E-value=33 Score=23.27 Aligned_cols=31 Identities=16% Similarity=0.024 Sum_probs=17.9
Q ss_pred eehhhHHHHHHHHHHH-HHHHHHHHHhccccc
Q 006031 292 IIGFSSGVLVLICSLV-LFAMAVKKQKQRKDK 322 (664)
Q Consensus 292 ii~i~vg~~vl~~~v~-~~~~~~~~~~~~~~~ 322 (664)
.-+|++|++..+++++ ++...+...|+|+.+
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3566666777555444 444456667776644
No 461
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=39.71 E-value=15 Score=24.29 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=9.7
Q ss_pred eehhhHHHHHHHHHHH
Q 006031 292 IIGFSSGVLVLICSLV 307 (664)
Q Consensus 292 ii~i~vg~~vl~~~v~ 307 (664)
+.++++++++.+++++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 3566777766665544
No 462
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=33.85 E-value=48 Score=22.47 Aligned_cols=27 Identities=22% Similarity=0.159 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccc
Q 006031 295 FSSGVLVLICSLVLFAMAVKKQKQRKD 321 (664)
Q Consensus 295 i~vg~~vl~~~v~~~~~~~~~~~~~~~ 321 (664)
++.+++.+++++++...+..+.|+|+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 444444444444444445566666554
No 463
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=32.69 E-value=37 Score=25.02 Aligned_cols=6 Identities=17% Similarity=-0.047 Sum_probs=2.4
Q ss_pred HHHHHH
Q 006031 306 LVLFAM 311 (664)
Q Consensus 306 v~~~~~ 311 (664)
..+.++
T Consensus 24 ~glcI~ 29 (70)
T 2klu_A 24 IGLGIF 29 (70)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334444
No 464
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.25 E-value=38 Score=26.20 Aligned_cols=24 Identities=25% Similarity=0.140 Sum_probs=15.1
Q ss_pred eehhhHHHHHHHHHHHHHHHHHHH
Q 006031 292 IIGFSSGVLVLICSLVLFAMAVKK 315 (664)
Q Consensus 292 ii~i~vg~~vl~~~v~~~~~~~~~ 315 (664)
+.+|+.|+++.++++.+++++.+|
T Consensus 10 ~~~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH
Confidence 456777777776666655554443
No 465
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=30.27 E-value=56 Score=22.13 Aligned_cols=31 Identities=16% Similarity=0.065 Sum_probs=18.6
Q ss_pred eehhhHHHHHHHHHH-HHHHHHHHHHhccccc
Q 006031 292 IIGFSSGVLVLICSL-VLFAMAVKKQKQRKDK 322 (664)
Q Consensus 292 ii~i~vg~~vl~~~v-~~~~~~~~~~~~~~~~ 322 (664)
..+|++|++..++++ +++...+...|+++.+
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 477777777755544 4444455666666543
No 466
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=30.04 E-value=68 Score=20.21 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=8.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 006031 295 FSSGVLVLICSLVLFAMAVK 314 (664)
Q Consensus 295 i~vg~~vl~~~v~~~~~~~~ 314 (664)
+++|.+++++.+..-+.+|+
T Consensus 12 ~i~gl~vif~~lg~tflywr 31 (40)
T 2l9u_A 12 VIAGLVVIFMMLGGTFLYWR 31 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCceeEEEc
Confidence 34454454444444333333
No 467
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=30.74 E-value=15 Score=24.53 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=7.2
Q ss_pred ceeeehhhHHHHHHH
Q 006031 289 TAVIIGFSSGVLVLI 303 (664)
Q Consensus 289 ~~~ii~i~vg~~vl~ 303 (664)
..+++++.++.+++.
T Consensus 16 rga~iGL~v~gVai~ 30 (43)
T 2llm_A 16 KGAIIGLMVGGVVIA 30 (43)
Confidence 345566554444333
No 468
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.02 E-value=18 Score=19.79 Aligned_cols=9 Identities=33% Similarity=1.088 Sum_probs=7.1
Q ss_pred CCccccceE
Q 006031 68 HFCQWQGVI 76 (664)
Q Consensus 68 ~~C~w~gv~ 76 (664)
.-|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
No 469
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=28.84 E-value=17 Score=23.70 Aligned_cols=6 Identities=33% Similarity=0.401 Sum_probs=2.3
Q ss_pred eeeehh
Q 006031 290 AVIIGF 295 (664)
Q Consensus 290 ~~ii~i 295 (664)
.+++|+
T Consensus 9 ~vl~av 14 (39)
T 2l6w_A 9 VVISAI 14 (39)
Confidence 333333
No 470
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=22.83 E-value=18 Score=41.99 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=0.0
Q ss_pred cceeeehhhHHHHHHHHHHHHHHHHHH
Q 006031 288 KTAVIIGFSSGVLVLICSLVLFAMAVK 314 (664)
Q Consensus 288 ~~~~ii~i~vg~~vl~~~v~~~~~~~~ 314 (664)
..+++++|.+|+++++++++++++++|
T Consensus 703 ~~~aii~il~~~~~ll~~~ll~~~~~~ 729 (880)
T 1q55_A 703 DLPIILVILGSVLALLILFLLLLLFLK 729 (880)
T ss_dssp ---------------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 445666676666555544444333333
No 471
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.87 E-value=1.7e+02 Score=23.45 Aligned_cols=16 Identities=13% Similarity=0.148 Sum_probs=8.2
Q ss_pred CccccCCCCCCEEEec
Q 006031 98 PNSLTKLDQLRVLGLQ 113 (664)
Q Consensus 98 p~~l~~l~~L~~L~L~ 113 (664)
...|.++++|+.+.|-
T Consensus 13 ~~aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQ 28 (100)
T ss_dssp SCTTTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcC
Confidence 3345555555555554
No 472
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=20.60 E-value=93 Score=20.28 Aligned_cols=13 Identities=23% Similarity=0.153 Sum_probs=5.3
Q ss_pred eehhhHHHHHHHH
Q 006031 292 IIGFSSGVLVLIC 304 (664)
Q Consensus 292 ii~i~vg~~vl~~ 304 (664)
++.++.++...++
T Consensus 12 i~lII~~vmaGiI 24 (40)
T 1afo_A 12 ITLIIFGVMAGVI 24 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3344444444333
Done!