Query 006034
Match_columns 663
No_of_seqs 424 out of 2580
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:12:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lnq_A MTHK channels, potassiu 99.9 5.6E-27 1.9E-31 248.9 12.9 211 403-634 115-326 (336)
2 4gx0_A TRKA domain protein; me 99.9 4.4E-25 1.5E-29 250.6 26.4 214 401-640 125-340 (565)
3 2aef_A Calcium-gated potassium 99.9 1.7E-25 5.8E-30 225.2 14.2 209 401-636 7-222 (234)
4 4g65_A TRK system potassium up 99.9 6.5E-25 2.2E-29 241.8 15.8 133 401-545 233-367 (461)
5 3fwz_A Inner membrane protein 99.9 2.3E-24 7.8E-29 199.3 15.6 136 400-545 4-139 (140)
6 3l9w_A Glutathione-regulated p 99.9 3.1E-24 1.1E-28 232.8 18.4 161 402-572 3-163 (413)
7 3l4b_C TRKA K+ channel protien 99.9 1.4E-24 4.6E-29 216.2 8.5 201 405-635 2-208 (218)
8 4g65_A TRK system potassium up 99.9 5.9E-24 2E-28 234.1 14.4 208 405-636 5-222 (461)
9 4gx0_A TRKA domain protein; me 99.9 7.9E-24 2.7E-28 240.3 9.8 198 404-636 349-552 (565)
10 3llv_A Exopolyphosphatase-rela 99.9 3.8E-21 1.3E-25 177.5 16.8 132 403-545 6-137 (141)
11 1id1_A Putative potassium chan 99.9 2.3E-21 8E-26 181.7 14.5 134 402-545 2-139 (153)
12 3c85_A Putative glutathione-re 99.8 2.4E-20 8.3E-25 180.1 16.6 137 402-548 38-176 (183)
13 1zcd_A Na(+)/H(+) antiporter 1 99.8 1.2E-21 4E-26 207.3 6.7 294 32-375 59-381 (388)
14 3naf_A Calcium-activated potas 99.7 8.1E-18 2.8E-22 191.9 12.8 262 349-633 10-313 (798)
15 1lss_A TRK system potassium up 99.7 1.6E-16 5.5E-21 145.4 14.4 131 404-545 5-136 (140)
16 2hmt_A YUAA protein; RCK, KTN, 99.7 5E-17 1.7E-21 149.5 10.9 132 403-545 6-138 (144)
17 2g1u_A Hypothetical protein TM 99.7 6.3E-17 2.2E-21 151.8 11.4 134 401-545 17-151 (155)
18 3mt5_A Potassium large conduct 99.7 4.5E-17 1.5E-21 183.8 10.3 220 402-633 2-263 (726)
19 4hpf_A Potassium channel subfa 99.4 5.5E-13 1.9E-17 155.1 9.4 221 402-632 2-264 (722)
20 3ic5_A Putative saccharopine d 98.2 6.9E-06 2.3E-10 71.7 10.1 103 403-519 5-108 (118)
21 1kyq_A Met8P, siroheme biosynt 97.7 7.5E-05 2.6E-09 75.6 7.9 102 403-518 13-147 (274)
22 3dfz_A SIRC, precorrin-2 dehyd 97.6 0.00013 4.5E-09 71.5 8.0 96 402-517 30-127 (223)
23 1vct_A Hypothetical protein PH 97.6 3.6E-07 1.2E-11 89.1 -10.5 132 463-635 42-186 (205)
24 4hpf_A Potassium channel subfa 97.3 0.00072 2.5E-08 78.3 11.5 122 400-525 382-530 (722)
25 2jl1_A Triphenylmethane reduct 97.2 0.0008 2.7E-08 68.2 8.6 89 405-504 2-100 (287)
26 3zux_A Transporter, ASBTNM; tr 97.2 0.3 1E-05 50.6 30.1 50 13-63 22-71 (332)
27 3abi_A Putative uncharacterize 97.1 0.0024 8.3E-08 67.5 11.4 111 402-528 15-129 (365)
28 2zcu_A Uncharacterized oxidore 97.1 0.0014 4.9E-08 66.1 9.1 89 405-504 1-97 (286)
29 1hdo_A Biliverdin IX beta redu 97.0 0.00048 1.7E-08 65.9 5.2 72 404-486 4-76 (206)
30 3naf_A Calcium-activated potas 97.0 0.00046 1.6E-08 79.2 5.5 167 400-570 398-635 (798)
31 2z2v_A Hypothetical protein PH 97.0 0.0017 5.7E-08 68.8 9.4 112 401-528 14-129 (365)
32 2ew2_A 2-dehydropantoate 2-red 97.0 0.0009 3.1E-08 68.9 6.6 105 405-521 5-118 (316)
33 1pjq_A CYSG, siroheme synthase 96.9 0.0021 7.3E-08 70.1 9.7 96 403-517 12-109 (457)
34 2r6j_A Eugenol synthase 1; phe 96.9 0.0028 9.5E-08 65.3 10.0 95 402-508 10-112 (318)
35 2rir_A Dipicolinate synthase, 96.9 0.0039 1.3E-07 64.0 11.0 114 402-534 156-271 (300)
36 2wm3_A NMRA-like family domain 96.9 0.0022 7.6E-08 65.4 9.1 73 403-486 5-81 (299)
37 3e48_A Putative nucleoside-dip 96.9 0.0017 5.7E-08 66.0 7.8 89 405-504 2-99 (289)
38 1qyd_A Pinoresinol-lariciresin 96.9 0.0024 8.3E-08 65.4 9.1 93 404-508 5-113 (313)
39 4dll_A 2-hydroxy-3-oxopropiona 96.9 0.0063 2.1E-07 63.1 12.0 110 403-531 31-149 (320)
40 3ius_A Uncharacterized conserv 96.8 0.0024 8.2E-08 64.6 8.6 69 402-486 4-72 (286)
41 3g0o_A 3-hydroxyisobutyrate de 96.8 0.0043 1.5E-07 63.8 10.1 111 403-531 7-127 (303)
42 1qyc_A Phenylcoumaran benzylic 96.8 0.0029 9.9E-08 64.7 8.7 93 404-508 5-110 (308)
43 2gas_A Isoflavone reductase; N 96.8 0.0044 1.5E-07 63.3 10.0 93 404-508 3-109 (307)
44 3ktd_A Prephenate dehydrogenas 96.8 0.0033 1.1E-07 65.8 9.1 95 402-512 7-101 (341)
45 3e8x_A Putative NAD-dependent 96.8 0.0039 1.3E-07 61.2 9.3 71 403-486 21-93 (236)
46 3qvo_A NMRA family protein; st 96.7 0.0018 6E-08 63.9 6.5 74 403-487 23-98 (236)
47 3qha_A Putative oxidoreductase 96.7 0.0094 3.2E-07 61.0 12.2 109 403-531 15-130 (296)
48 3l6d_A Putative oxidoreductase 96.7 0.0083 2.8E-07 61.8 11.8 107 402-528 8-123 (306)
49 3c1o_A Eugenol synthase; pheny 96.7 0.0049 1.7E-07 63.4 10.1 93 404-508 5-110 (321)
50 3h2s_A Putative NADH-flavin re 96.7 0.0016 5.6E-08 63.2 5.8 83 405-500 2-91 (224)
51 4gbj_A 6-phosphogluconate dehy 96.7 0.0059 2E-07 62.7 10.0 112 402-532 4-123 (297)
52 3i6i_A Putative leucoanthocyan 96.7 0.0042 1.4E-07 64.9 8.9 88 404-502 11-110 (346)
53 3dqp_A Oxidoreductase YLBE; al 96.7 0.0028 9.6E-08 61.5 7.1 86 405-503 2-98 (219)
54 3r6d_A NAD-dependent epimerase 96.6 0.0042 1.4E-07 60.3 8.0 90 403-502 5-99 (221)
55 2h78_A Hibadh, 3-hydroxyisobut 96.6 0.011 3.8E-07 60.5 11.5 109 404-531 4-122 (302)
56 2f1k_A Prephenate dehydrogenas 96.6 0.0084 2.9E-07 60.6 10.3 87 405-511 2-90 (279)
57 3pef_A 6-phosphogluconate dehy 96.6 0.011 3.8E-07 60.1 11.1 109 404-531 2-120 (287)
58 4ina_A Saccharopine dehydrogen 96.5 0.0045 1.6E-07 66.4 8.5 116 404-533 2-142 (405)
59 1txg_A Glycerol-3-phosphate de 96.5 0.001 3.6E-08 69.2 3.3 96 405-512 2-105 (335)
60 1leh_A Leucine dehydrogenase; 96.5 0.0021 7.2E-08 67.8 5.4 106 403-533 173-284 (364)
61 3cky_A 2-hydroxymethyl glutara 96.5 0.013 4.3E-07 59.9 11.2 109 404-531 5-123 (301)
62 3ew7_A LMO0794 protein; Q8Y8U8 96.5 0.002 6.7E-08 62.3 4.8 69 405-487 2-71 (221)
63 1jw9_B Molybdopterin biosynthe 96.5 0.0033 1.1E-07 62.9 6.4 88 403-502 31-146 (249)
64 3doj_A AT3G25530, dehydrogenas 96.5 0.0098 3.3E-07 61.3 10.2 110 403-531 21-140 (310)
65 3d4o_A Dipicolinate synthase s 96.4 0.011 3.7E-07 60.5 10.2 112 403-533 155-268 (293)
66 3obb_A Probable 3-hydroxyisobu 96.4 0.011 3.6E-07 60.9 10.0 109 404-531 4-122 (300)
67 3dhn_A NAD-dependent epimerase 96.4 0.0026 8.8E-08 62.0 5.0 72 404-487 5-77 (227)
68 2cvz_A Dehydrogenase, 3-hydrox 96.4 0.011 3.9E-07 59.8 10.1 66 405-490 3-68 (289)
69 1xgk_A Nitrogen metabolite rep 96.3 0.0095 3.3E-07 62.6 9.0 89 403-502 5-103 (352)
70 3pdu_A 3-hydroxyisobutyrate de 96.3 0.013 4.3E-07 59.7 9.6 108 405-531 3-120 (287)
71 1vpd_A Tartronate semialdehyde 96.3 0.018 6.3E-07 58.6 10.9 68 404-490 6-74 (299)
72 3ggo_A Prephenate dehydrogenas 96.2 0.013 4.4E-07 60.6 9.6 93 403-512 33-128 (314)
73 3d1l_A Putative NADP oxidoredu 96.2 0.0075 2.6E-07 60.5 7.6 89 404-512 11-102 (266)
74 1lld_A L-lactate dehydrogenase 96.2 0.012 4.2E-07 60.7 9.3 131 404-551 8-169 (319)
75 2we8_A Xanthine dehydrogenase; 96.2 0.0046 1.6E-07 65.7 5.9 113 401-526 202-323 (386)
76 2x4g_A Nucleoside-diphosphate- 96.2 0.0083 2.8E-07 62.1 7.7 71 405-486 15-86 (342)
77 2g5c_A Prephenate dehydrogenas 96.1 0.013 4.3E-07 59.4 8.6 87 405-511 3-95 (281)
78 4e21_A 6-phosphogluconate dehy 96.1 0.016 5.3E-07 61.1 9.3 107 404-528 23-137 (358)
79 3tri_A Pyrroline-5-carboxylate 96.1 0.027 9.2E-07 57.1 10.7 68 404-489 4-75 (280)
80 1bg6_A N-(1-D-carboxylethyl)-L 96.0 0.014 4.8E-07 61.1 8.8 92 404-510 5-108 (359)
81 2vns_A Metalloreductase steap3 96.0 0.0067 2.3E-07 59.0 5.8 66 404-488 29-94 (215)
82 3c24_A Putative oxidoreductase 96.0 0.012 4E-07 59.9 7.7 90 404-514 12-103 (286)
83 1hyh_A L-hicdh, L-2-hydroxyiso 96.0 0.049 1.7E-06 56.0 12.3 128 405-551 3-167 (309)
84 3hwr_A 2-dehydropantoate 2-red 96.0 0.015 5.2E-07 60.1 8.4 110 402-529 18-138 (318)
85 3on5_A BH1974 protein; structu 95.9 0.015 5.2E-07 60.9 8.2 117 401-531 197-316 (362)
86 3oj0_A Glutr, glutamyl-tRNA re 95.9 0.0099 3.4E-07 53.7 5.9 70 403-488 21-91 (144)
87 2axq_A Saccharopine dehydrogen 95.9 0.015 5E-07 63.6 8.2 110 404-526 24-138 (467)
88 1ff9_A Saccharopine reductase; 95.9 0.0097 3.3E-07 64.7 6.7 111 404-528 4-120 (450)
89 4gwg_A 6-phosphogluconate dehy 95.9 0.032 1.1E-06 61.1 10.7 115 404-531 5-128 (484)
90 2eez_A Alanine dehydrogenase; 95.8 0.0064 2.2E-07 64.4 4.7 95 403-509 166-264 (369)
91 3dtt_A NADP oxidoreductase; st 95.8 0.011 3.9E-07 58.7 6.3 91 402-512 18-124 (245)
92 2p4q_A 6-phosphogluconate dehy 95.8 0.053 1.8E-06 59.6 12.2 117 401-531 8-134 (497)
93 4e12_A Diketoreductase; oxidor 95.7 0.011 3.7E-07 60.2 5.7 41 404-454 5-45 (283)
94 2gf2_A Hibadh, 3-hydroxyisobut 95.6 0.034 1.2E-06 56.6 9.4 67 405-490 2-69 (296)
95 3gt0_A Pyrroline-5-carboxylate 95.6 0.02 6.9E-07 56.8 7.5 66 404-488 3-74 (247)
96 1xq6_A Unknown protein; struct 95.6 0.017 5.8E-07 56.7 6.9 71 403-485 4-77 (253)
97 3ego_A Probable 2-dehydropanto 95.6 0.011 3.8E-07 60.8 5.6 111 404-528 3-117 (307)
98 2zyd_A 6-phosphogluconate dehy 95.6 0.059 2E-06 59.0 11.6 112 402-528 14-135 (480)
99 3n58_A Adenosylhomocysteinase; 95.6 0.0077 2.6E-07 64.5 4.3 83 402-505 246-328 (464)
100 3k96_A Glycerol-3-phosphate de 95.6 0.028 9.7E-07 59.1 8.7 94 403-512 29-134 (356)
101 3eod_A Protein HNR; response r 95.5 0.12 4E-06 44.7 11.4 98 434-532 5-109 (130)
102 3gpi_A NAD-dependent epimerase 95.5 0.011 3.7E-07 59.8 4.9 68 404-485 4-71 (286)
103 1i36_A Conserved hypothetical 95.5 0.023 7.9E-07 56.8 7.3 65 405-489 2-68 (264)
104 4ezb_A Uncharacterized conserv 95.5 0.028 9.7E-07 58.1 8.1 91 402-512 23-121 (317)
105 1cyd_A Carbonyl reductase; sho 95.5 0.028 9.4E-07 55.2 7.8 73 404-486 8-85 (244)
106 3ce6_A Adenosylhomocysteinase; 95.4 0.013 4.6E-07 64.1 5.6 85 402-507 273-357 (494)
107 1lu9_A Methylene tetrahydromet 95.4 0.027 9.4E-07 57.2 7.6 73 403-486 119-197 (287)
108 2ahr_A Putative pyrroline carb 95.4 0.028 9.5E-07 56.0 7.5 65 405-488 5-71 (259)
109 2v6b_A L-LDH, L-lactate dehydr 95.3 0.18 6.1E-06 51.7 13.6 132 405-554 2-162 (304)
110 4huj_A Uncharacterized protein 95.3 0.035 1.2E-06 54.1 7.8 67 404-488 24-92 (220)
111 1y1p_A ARII, aldehyde reductas 95.3 0.017 5.9E-07 59.6 6.0 73 402-485 10-91 (342)
112 3hn2_A 2-dehydropantoate 2-red 95.3 0.041 1.4E-06 56.6 8.7 106 404-527 3-120 (312)
113 1np3_A Ketol-acid reductoisome 95.3 0.028 9.4E-07 58.7 7.5 68 404-490 17-85 (338)
114 1smk_A Malate dehydrogenase, g 95.3 0.16 5.3E-06 52.7 13.0 138 404-554 9-176 (326)
115 3gvp_A Adenosylhomocysteinase 95.3 0.011 3.9E-07 63.1 4.3 81 403-504 220-300 (435)
116 4id9_A Short-chain dehydrogena 95.3 0.016 5.6E-07 60.1 5.6 68 401-485 17-85 (347)
117 3d3w_A L-xylulose reductase; u 95.3 0.036 1.2E-06 54.4 7.8 73 404-486 8-85 (244)
118 2qyt_A 2-dehydropantoate 2-red 95.2 0.011 3.7E-07 60.8 4.0 101 404-521 9-127 (317)
119 1yqg_A Pyrroline-5-carboxylate 95.2 0.03 1E-06 55.9 7.1 64 405-487 2-67 (263)
120 2uyy_A N-PAC protein; long-cha 95.2 0.047 1.6E-06 56.1 8.8 70 403-491 30-100 (316)
121 1a5z_A L-lactate dehydrogenase 95.2 0.073 2.5E-06 55.0 10.2 130 405-552 2-162 (319)
122 3ruf_A WBGU; rossmann fold, UD 95.1 0.077 2.6E-06 55.0 10.4 73 403-486 25-109 (351)
123 3pqe_A L-LDH, L-lactate dehydr 95.1 0.18 6.2E-06 52.2 12.9 133 403-554 5-170 (326)
124 3b1f_A Putative prephenate deh 95.1 0.034 1.2E-06 56.4 7.2 90 404-512 7-101 (290)
125 1ks9_A KPA reductase;, 2-dehyd 95.1 0.0062 2.1E-07 61.7 1.6 100 405-520 2-106 (291)
126 1mv8_A GMD, GDP-mannose 6-dehy 95.1 0.037 1.3E-06 59.9 7.9 42 405-456 2-43 (436)
127 3qsg_A NAD-binding phosphogluc 95.1 0.039 1.3E-06 56.9 7.6 69 404-490 25-96 (312)
128 2bka_A CC3, TAT-interacting pr 95.1 0.0067 2.3E-07 59.6 1.7 73 404-487 19-94 (242)
129 2izz_A Pyrroline-5-carboxylate 95.0 0.046 1.6E-06 56.6 8.1 66 405-488 24-95 (322)
130 3h9u_A Adenosylhomocysteinase; 95.0 0.03 1E-06 60.0 6.7 81 403-504 211-291 (436)
131 2raf_A Putative dinucleotide-b 95.0 0.036 1.2E-06 53.6 6.8 50 403-488 19-68 (209)
132 3d64_A Adenosylhomocysteinase; 95.0 0.014 4.9E-07 63.7 4.1 82 402-504 276-357 (494)
133 1jay_A Coenzyme F420H2:NADP+ o 94.9 0.079 2.7E-06 50.9 9.0 69 405-490 2-77 (212)
134 2y0c_A BCEC, UDP-glucose dehyd 94.9 0.043 1.5E-06 60.1 7.9 74 402-487 7-94 (478)
135 3m2p_A UDP-N-acetylglucosamine 94.9 0.038 1.3E-06 56.5 7.0 68 404-486 3-71 (311)
136 1yb4_A Tartronic semialdehyde 94.9 0.033 1.1E-06 56.6 6.5 67 405-490 5-71 (295)
137 2gn4_A FLAA1 protein, UDP-GLCN 94.8 0.032 1.1E-06 58.2 6.4 73 403-486 21-100 (344)
138 3gg2_A Sugar dehydrogenase, UD 94.8 0.02 7E-07 62.2 4.9 40 405-454 4-43 (450)
139 2iz1_A 6-phosphogluconate dehy 94.8 0.1 3.5E-06 57.0 10.5 94 404-512 6-103 (474)
140 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.8 0.094 3.2E-06 57.4 10.1 93 405-511 3-102 (478)
141 2pgd_A 6-phosphogluconate dehy 94.7 0.12 4.2E-06 56.6 10.8 110 405-531 4-126 (482)
142 1mld_A Malate dehydrogenase; o 94.7 0.19 6.6E-06 51.7 11.6 136 405-555 2-169 (314)
143 3ezy_A Dehydrogenase; structur 94.7 0.13 4.3E-06 53.6 10.4 110 405-531 4-122 (344)
144 3p2y_A Alanine dehydrogenase/p 94.7 0.0096 3.3E-07 62.8 1.8 99 402-511 183-302 (381)
145 3ko8_A NAD-dependent epimerase 94.6 0.026 8.8E-07 57.6 4.9 69 405-486 2-71 (312)
146 1dlj_A UDP-glucose dehydrogena 94.6 0.095 3.2E-06 56.0 9.5 112 405-532 2-141 (402)
147 3o38_A Short chain dehydrogena 94.6 0.03 1E-06 55.9 5.3 74 403-486 22-110 (266)
148 3ged_A Short-chain dehydrogena 94.6 0.04 1.4E-06 54.7 6.1 70 404-483 3-81 (247)
149 3f9i_A 3-oxoacyl-[acyl-carrier 94.6 0.05 1.7E-06 53.6 6.8 74 402-485 13-92 (249)
150 1v8b_A Adenosylhomocysteinase; 94.5 0.013 4.5E-07 63.7 2.5 86 402-509 256-341 (479)
151 2c5a_A GDP-mannose-3', 5'-epim 94.5 0.017 5.8E-07 61.1 3.3 71 404-485 30-101 (379)
152 3ghy_A Ketopantoate reductase 94.5 0.034 1.2E-06 57.9 5.5 69 404-488 4-81 (335)
153 2ehd_A Oxidoreductase, oxidore 94.5 0.039 1.3E-06 53.8 5.5 73 403-485 5-86 (234)
154 3mt5_A Potassium large conduct 94.4 0.058 2E-06 61.2 7.5 119 400-523 374-555 (726)
155 3sxp_A ADP-L-glycero-D-mannohe 94.4 0.031 1E-06 58.5 4.9 73 403-485 10-98 (362)
156 1z82_A Glycerol-3-phosphate de 94.4 0.045 1.5E-06 56.9 6.1 71 402-488 13-91 (335)
157 2ph5_A Homospermidine synthase 94.3 0.046 1.6E-06 59.1 6.1 99 401-512 11-115 (480)
158 3bio_A Oxidoreductase, GFO/IDH 94.2 0.071 2.4E-06 54.7 7.1 85 404-510 10-95 (304)
159 1guz_A Malate dehydrogenase; o 94.2 0.42 1.4E-05 49.0 13.0 135 405-554 2-166 (310)
160 2dpo_A L-gulonate 3-dehydrogen 94.2 0.088 3E-06 54.4 7.7 41 403-453 6-46 (319)
161 3orq_A N5-carboxyaminoimidazol 94.1 0.019 6.4E-07 60.9 2.6 111 402-527 11-125 (377)
162 1evy_A Glycerol-3-phosphate de 94.1 0.052 1.8E-06 57.1 5.9 68 405-488 17-96 (366)
163 2pzm_A Putative nucleotide sug 94.0 0.023 8E-07 58.7 3.1 73 403-486 20-97 (330)
164 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.13 4.4E-06 52.5 8.6 39 404-452 16-54 (302)
165 1sb8_A WBPP; epimerase, 4-epim 94.0 0.064 2.2E-06 55.8 6.4 72 404-486 28-111 (352)
166 1tlt_A Putative oxidoreductase 94.0 0.19 6.4E-06 51.6 9.9 106 404-529 6-121 (319)
167 1zcj_A Peroxisomal bifunctiona 94.0 0.2 6.8E-06 54.6 10.5 70 403-489 37-126 (463)
168 1uls_A Putative 3-oxoacyl-acyl 94.0 0.078 2.7E-06 52.3 6.7 72 404-485 6-85 (245)
169 2d5c_A AROE, shikimate 5-dehyd 94.0 0.04 1.4E-06 55.2 4.5 106 405-531 118-228 (263)
170 1b8p_A Protein (malate dehydro 93.9 0.18 6.2E-06 52.3 9.6 138 404-554 6-181 (329)
171 3ojo_A CAP5O; rossmann fold, c 93.9 0.069 2.3E-06 57.5 6.5 74 404-489 12-95 (431)
172 1ez4_A Lactate dehydrogenase; 93.9 0.26 9E-06 50.8 10.7 136 403-554 5-169 (318)
173 3njr_A Precorrin-6Y methylase; 93.9 0.4 1.4E-05 45.7 11.4 96 402-515 55-158 (204)
174 2qxy_A Response regulator; reg 93.9 0.48 1.6E-05 41.4 11.2 97 435-532 3-105 (142)
175 3ak4_A NADH-dependent quinucli 93.8 0.084 2.9E-06 52.5 6.7 72 404-485 13-94 (263)
176 3e18_A Oxidoreductase; dehydro 93.8 0.21 7.3E-06 52.3 10.1 109 404-531 6-123 (359)
177 2ewd_A Lactate dehydrogenase,; 93.8 0.36 1.2E-05 49.6 11.6 131 403-551 4-166 (317)
178 1zej_A HBD-9, 3-hydroxyacyl-CO 93.8 0.043 1.5E-06 56.0 4.4 44 401-455 10-53 (293)
179 2i6t_A Ubiquitin-conjugating e 93.8 0.28 9.6E-06 50.2 10.6 137 402-555 13-174 (303)
180 3vku_A L-LDH, L-lactate dehydr 93.8 0.39 1.3E-05 49.6 11.7 134 402-554 8-173 (326)
181 3p19_A BFPVVD8, putative blue 93.7 0.05 1.7E-06 54.6 4.8 73 403-485 16-95 (266)
182 3p7m_A Malate dehydrogenase; p 93.7 0.47 1.6E-05 48.9 12.2 134 404-555 6-171 (321)
183 4dio_A NAD(P) transhydrogenase 93.7 0.024 8.4E-07 60.2 2.5 98 402-510 189-311 (405)
184 3i83_A 2-dehydropantoate 2-red 93.7 0.08 2.7E-06 54.6 6.4 109 404-529 3-124 (320)
185 2pd6_A Estradiol 17-beta-dehyd 93.7 0.087 3E-06 52.2 6.5 72 404-485 8-100 (264)
186 3uuw_A Putative oxidoreductase 93.7 0.13 4.5E-06 52.5 8.0 108 404-531 7-124 (308)
187 3o8q_A Shikimate 5-dehydrogena 93.7 0.077 2.6E-06 53.8 6.0 124 403-543 126-256 (281)
188 3nzo_A UDP-N-acetylglucosamine 93.6 0.071 2.4E-06 56.9 6.0 73 403-485 35-120 (399)
189 3gvi_A Malate dehydrogenase; N 93.6 0.5 1.7E-05 48.8 12.2 135 403-555 7-173 (324)
190 1wwk_A Phosphoglycerate dehydr 93.6 0.035 1.2E-06 57.1 3.4 67 403-489 142-208 (307)
191 1y7t_A Malate dehydrogenase; N 93.6 0.35 1.2E-05 49.9 11.0 138 404-554 5-178 (327)
192 2gcg_A Glyoxylate reductase/hy 93.6 0.051 1.8E-06 56.5 4.6 67 403-488 155-221 (330)
193 3dii_A Short-chain dehydrogena 93.5 0.08 2.7E-06 52.3 5.8 72 404-485 3-83 (247)
194 3guy_A Short-chain dehydrogena 93.5 0.12 4.3E-06 50.1 7.1 72 404-485 2-80 (230)
195 4aj2_A L-lactate dehydrogenase 93.5 0.49 1.7E-05 48.9 11.9 138 401-555 17-185 (331)
196 4hkt_A Inositol 2-dehydrogenas 93.5 0.23 7.8E-06 51.3 9.4 109 404-532 4-122 (331)
197 2bgk_A Rhizome secoisolaricire 93.5 0.081 2.8E-06 52.9 5.8 72 404-485 17-100 (278)
198 1fmc_A 7 alpha-hydroxysteroid 93.5 0.075 2.6E-06 52.4 5.5 72 404-485 12-96 (255)
199 2pv7_A T-protein [includes: ch 93.4 0.099 3.4E-06 53.4 6.5 35 403-447 21-56 (298)
200 3q2o_A Phosphoribosylaminoimid 93.4 0.086 2.9E-06 55.9 6.1 111 402-527 13-127 (389)
201 1p77_A Shikimate 5-dehydrogena 93.4 0.061 2.1E-06 54.2 4.7 113 403-532 119-239 (272)
202 3cea_A MYO-inositol 2-dehydrog 93.4 0.2 6.7E-06 52.1 8.8 112 403-531 8-130 (346)
203 2zqz_A L-LDH, L-lactate dehydr 93.4 0.6 2E-05 48.2 12.3 137 402-554 8-173 (326)
204 3pid_A UDP-glucose 6-dehydroge 93.4 0.12 4E-06 55.7 7.1 71 403-488 36-120 (432)
205 2z1n_A Dehydrogenase; reductas 93.4 0.089 3E-06 52.3 5.8 72 404-486 8-94 (260)
206 3eag_A UDP-N-acetylmuramate:L- 93.3 0.13 4.4E-06 53.3 7.2 90 403-510 4-96 (326)
207 3rc1_A Sugar 3-ketoreductase; 93.3 0.15 5.3E-06 53.2 7.9 110 404-531 28-147 (350)
208 1ek6_A UDP-galactose 4-epimera 93.3 0.1 3.5E-06 53.9 6.5 72 404-486 3-90 (348)
209 2ag5_A DHRS6, dehydrogenase/re 93.3 0.066 2.2E-06 52.8 4.7 72 404-485 7-82 (246)
210 3ldh_A Lactate dehydrogenase; 93.3 0.81 2.8E-05 47.2 13.0 137 402-555 20-187 (330)
211 3jtm_A Formate dehydrogenase, 93.2 0.047 1.6E-06 57.2 3.6 84 403-504 164-249 (351)
212 3enk_A UDP-glucose 4-epimerase 93.2 0.08 2.7E-06 54.6 5.5 73 403-485 5-86 (341)
213 3awd_A GOX2181, putative polyo 93.2 0.099 3.4E-06 51.7 5.8 72 404-485 14-98 (260)
214 3ek2_A Enoyl-(acyl-carrier-pro 93.2 0.13 4.6E-06 51.1 6.8 74 401-484 12-99 (271)
215 4e4t_A Phosphoribosylaminoimid 93.2 0.031 1.1E-06 60.2 2.2 110 402-527 34-148 (419)
216 3tnl_A Shikimate dehydrogenase 93.2 0.12 4.1E-06 53.2 6.5 119 403-533 154-287 (315)
217 3rd5_A Mypaa.01249.C; ssgcid, 93.1 0.12 4.2E-06 52.2 6.6 73 403-485 16-94 (291)
218 1zk4_A R-specific alcohol dehy 93.1 0.082 2.8E-06 52.0 5.2 72 404-485 7-90 (251)
219 2vhw_A Alanine dehydrogenase; 93.1 0.047 1.6E-06 57.9 3.6 96 402-509 167-266 (377)
220 1yb1_A 17-beta-hydroxysteroid 93.1 0.1 3.4E-06 52.3 5.8 73 403-485 31-116 (272)
221 3kto_A Response regulator rece 93.1 0.84 2.9E-05 39.6 11.4 97 435-532 5-110 (136)
222 1y6j_A L-lactate dehydrogenase 93.1 0.18 6.2E-06 52.0 7.9 134 403-554 7-171 (318)
223 3l6e_A Oxidoreductase, short-c 93.1 0.088 3E-06 51.6 5.2 72 404-485 4-85 (235)
224 2wsb_A Galactitol dehydrogenas 93.1 0.095 3.2E-06 51.6 5.5 72 404-485 12-93 (254)
225 1hdc_A 3-alpha, 20 beta-hydrox 93.1 0.11 3.6E-06 51.6 5.9 72 404-485 6-87 (254)
226 3e9m_A Oxidoreductase, GFO/IDH 93.1 0.15 5.3E-06 52.7 7.3 111 404-532 6-126 (330)
227 3kht_A Response regulator; PSI 93.0 0.83 2.8E-05 40.0 11.3 99 435-533 4-112 (144)
228 3ond_A Adenosylhomocysteinase; 93.0 0.1 3.5E-06 56.7 6.0 66 403-487 265-330 (488)
229 2nwq_A Probable short-chain de 93.0 0.09 3.1E-06 52.9 5.3 74 402-485 20-105 (272)
230 3nep_X Malate dehydrogenase; h 93.0 0.69 2.4E-05 47.5 12.0 134 405-555 2-167 (314)
231 3fpf_A Mtnas, putative unchara 93.0 0.31 1.1E-05 49.6 9.2 95 401-511 121-222 (298)
232 3n74_A 3-ketoacyl-(acyl-carrie 93.0 0.13 4.4E-06 51.0 6.3 73 403-485 9-91 (261)
233 3ucx_A Short chain dehydrogena 93.0 0.12 4.1E-06 51.5 6.1 72 404-485 12-96 (264)
234 1ldn_A L-lactate dehydrogenase 93.0 0.67 2.3E-05 47.6 12.0 137 402-554 5-171 (316)
235 2a35_A Hypothetical protein PA 93.0 0.032 1.1E-06 53.4 1.8 67 403-486 5-74 (215)
236 2pd4_A Enoyl-[acyl-carrier-pro 92.9 0.18 6.2E-06 50.5 7.5 72 404-485 7-92 (275)
237 3f6c_A Positive transcription 92.9 0.26 8.9E-06 42.6 7.6 96 437-532 2-104 (134)
238 4e6p_A Probable sorbitol dehyd 92.9 0.12 4.3E-06 51.2 6.1 72 404-485 9-90 (259)
239 4fgs_A Probable dehydrogenase 92.9 0.17 5.7E-06 51.0 7.0 73 402-484 27-110 (273)
240 2c29_D Dihydroflavonol 4-reduc 92.9 0.042 1.4E-06 56.7 2.7 70 404-484 6-84 (337)
241 3hzh_A Chemotaxis response reg 92.9 0.24 8.1E-06 44.6 7.5 56 477-532 83-141 (157)
242 3lk7_A UDP-N-acetylmuramoylala 92.9 0.15 5.1E-06 55.3 7.2 83 403-502 9-96 (451)
243 4e7p_A Response regulator; DNA 92.9 0.5 1.7E-05 41.9 9.7 97 436-532 20-124 (150)
244 2cfc_A 2-(R)-hydroxypropyl-COM 92.9 0.095 3.2E-06 51.5 5.1 72 404-485 3-88 (250)
245 1iy8_A Levodione reductase; ox 92.9 0.12 4.1E-06 51.6 6.0 71 404-484 14-99 (267)
246 4ffl_A PYLC; amino acid, biosy 92.9 0.046 1.6E-06 57.4 3.0 84 404-500 2-86 (363)
247 1yde_A Retinal dehydrogenase/r 92.8 0.13 4.4E-06 51.6 6.1 72 404-485 10-90 (270)
248 2jah_A Clavulanic acid dehydro 92.8 0.12 4.2E-06 50.9 5.9 72 404-485 8-92 (247)
249 3euw_A MYO-inositol dehydrogen 92.8 0.26 8.8E-06 51.2 8.6 108 404-530 5-122 (344)
250 1yo6_A Putative carbonyl reduc 92.8 0.093 3.2E-06 51.3 4.9 72 404-485 4-89 (250)
251 2rh8_A Anthocyanidin reductase 92.8 0.038 1.3E-06 57.0 2.2 71 403-484 9-87 (338)
252 1nyt_A Shikimate 5-dehydrogena 92.8 0.064 2.2E-06 54.0 3.7 112 403-532 119-238 (271)
253 3qiv_A Short-chain dehydrogena 92.7 0.1 3.6E-06 51.4 5.3 73 403-485 9-94 (253)
254 3gem_A Short chain dehydrogena 92.7 0.11 3.7E-06 51.8 5.4 72 404-485 28-107 (260)
255 3r1i_A Short-chain type dehydr 92.7 0.12 4.1E-06 52.0 5.8 72 404-485 33-117 (276)
256 2yy7_A L-threonine dehydrogena 92.7 0.055 1.9E-06 55.0 3.3 70 404-486 3-77 (312)
257 3nyw_A Putative oxidoreductase 92.7 0.13 4.6E-06 50.8 6.0 73 403-485 7-95 (250)
258 2a4k_A 3-oxoacyl-[acyl carrier 92.7 0.13 4.6E-06 51.2 6.1 71 404-484 7-87 (263)
259 3pwz_A Shikimate dehydrogenase 92.7 0.16 5.4E-06 51.2 6.5 116 403-534 120-241 (272)
260 3evt_A Phosphoglycerate dehydr 92.7 0.24 8.1E-06 51.2 8.0 83 402-504 136-220 (324)
261 1qsg_A Enoyl-[acyl-carrier-pro 92.7 0.14 4.9E-06 50.9 6.2 72 404-485 10-95 (265)
262 2wyu_A Enoyl-[acyl carrier pro 92.7 0.14 4.9E-06 50.8 6.2 72 404-485 9-94 (261)
263 3u62_A Shikimate dehydrogenase 92.7 0.13 4.4E-06 51.3 5.7 131 405-553 110-243 (253)
264 3asu_A Short-chain dehydrogena 92.7 0.1 3.5E-06 51.6 5.0 70 405-484 2-81 (248)
265 3l77_A Short-chain alcohol deh 92.6 0.15 5E-06 49.7 6.1 72 404-485 3-88 (235)
266 1xu9_A Corticosteroid 11-beta- 92.6 0.085 2.9E-06 53.3 4.5 72 403-484 28-113 (286)
267 3c1a_A Putative oxidoreductase 92.6 0.19 6.4E-06 51.6 7.2 109 404-531 11-127 (315)
268 3imf_A Short chain dehydrogena 92.6 0.15 5E-06 50.7 6.2 72 404-485 7-91 (257)
269 2v6g_A Progesterone 5-beta-red 92.6 0.082 2.8E-06 55.0 4.5 71 404-485 2-80 (364)
270 1nff_A Putative oxidoreductase 92.6 0.13 4.5E-06 51.2 5.8 72 404-485 8-89 (260)
271 3h7a_A Short chain dehydrogena 92.6 0.098 3.4E-06 51.9 4.8 73 403-485 7-91 (252)
272 3ppi_A 3-hydroxyacyl-COA dehyd 92.6 0.12 4E-06 52.0 5.4 71 404-484 31-110 (281)
273 4fn4_A Short chain dehydrogena 92.5 0.14 4.9E-06 51.0 5.9 61 402-472 5-73 (254)
274 2vt3_A REX, redox-sensing tran 92.5 0.086 2.9E-06 51.2 4.2 85 402-502 84-169 (215)
275 2o23_A HADH2 protein; HSD17B10 92.5 0.11 3.7E-06 51.6 5.0 72 404-485 13-94 (265)
276 2ae2_A Protein (tropinone redu 92.5 0.12 4.1E-06 51.3 5.3 72 404-485 10-95 (260)
277 1ur5_A Malate dehydrogenase; o 92.5 0.58 2E-05 47.9 10.7 134 404-555 3-168 (309)
278 2pnf_A 3-oxoacyl-[acyl-carrier 92.5 0.1 3.5E-06 51.1 4.8 72 404-485 8-93 (248)
279 3rft_A Uronate dehydrogenase; 92.5 0.041 1.4E-06 55.0 1.9 68 404-485 4-72 (267)
280 4eso_A Putative oxidoreductase 92.5 0.13 4.4E-06 51.1 5.5 71 404-484 9-89 (255)
281 1xg5_A ARPG836; short chain de 92.4 0.13 4.5E-06 51.6 5.7 72 404-485 33-119 (279)
282 3oig_A Enoyl-[acyl-carrier-pro 92.4 0.15 5.1E-06 50.7 6.0 72 403-484 7-94 (266)
283 3eul_A Possible nitrate/nitrit 92.4 0.45 1.5E-05 42.3 8.7 99 434-532 13-119 (152)
284 2ekl_A D-3-phosphoglycerate de 92.4 0.12 4.2E-06 53.1 5.5 68 402-489 141-208 (313)
285 2wtb_A MFP2, fatty acid multif 92.4 0.73 2.5E-05 53.0 12.4 40 403-452 312-351 (725)
286 3ai3_A NADPH-sorbose reductase 92.4 0.14 4.9E-06 50.8 5.8 72 404-485 8-93 (263)
287 3cxt_A Dehydrogenase with diff 92.4 0.16 5.6E-06 51.5 6.3 72 404-485 35-119 (291)
288 3svt_A Short-chain type dehydr 92.4 0.12 4.1E-06 52.0 5.3 72 404-485 12-99 (281)
289 3d0o_A L-LDH 1, L-lactate dehy 92.4 0.76 2.6E-05 47.2 11.4 133 404-554 7-171 (317)
290 1xkq_A Short-chain reductase f 92.3 0.098 3.3E-06 52.7 4.5 72 404-485 7-94 (280)
291 1c1d_A L-phenylalanine dehydro 92.3 0.19 6.6E-06 52.5 6.8 107 402-533 174-285 (355)
292 2glx_A 1,5-anhydro-D-fructose 92.3 0.23 8E-06 51.2 7.5 109 405-532 2-121 (332)
293 3hdg_A Uncharacterized protein 92.3 0.34 1.2E-05 42.1 7.6 98 434-532 5-109 (137)
294 2xxj_A L-LDH, L-lactate dehydr 92.3 0.62 2.1E-05 47.7 10.6 134 405-554 2-164 (310)
295 1oc2_A DTDP-glucose 4,6-dehydr 92.3 0.066 2.3E-06 55.4 3.2 72 404-486 5-84 (348)
296 3db2_A Putative NADPH-dependen 92.3 0.42 1.5E-05 49.8 9.5 110 404-532 6-125 (354)
297 3fi9_A Malate dehydrogenase; s 92.2 1.4 4.7E-05 45.8 13.2 137 402-554 7-173 (343)
298 1x0v_A GPD-C, GPDH-C, glycerol 92.2 0.086 3E-06 55.0 4.1 70 404-488 9-101 (354)
299 3gvc_A Oxidoreductase, probabl 92.2 0.2 6.7E-06 50.5 6.6 72 404-485 30-111 (277)
300 3nrc_A Enoyl-[acyl-carrier-pro 92.2 0.17 6E-06 50.8 6.2 72 404-485 27-111 (280)
301 2h7i_A Enoyl-[acyl-carrier-pro 92.2 0.18 6.1E-06 50.4 6.3 71 404-484 8-94 (269)
302 1pjc_A Protein (L-alanine dehy 92.2 0.074 2.5E-06 56.0 3.6 74 404-488 168-241 (361)
303 1geg_A Acetoin reductase; SDR 92.2 0.15 5.1E-06 50.5 5.7 72 404-485 3-87 (256)
304 2egg_A AROE, shikimate 5-dehyd 92.2 0.11 3.9E-06 53.0 4.8 116 403-532 141-263 (297)
305 3q2i_A Dehydrogenase; rossmann 92.2 0.3 1E-05 50.9 8.2 112 403-532 13-134 (354)
306 2yjz_A Metalloreductase steap4 91.4 0.027 9.1E-07 54.2 0.0 66 403-488 19-84 (201)
307 1qkk_A DCTD, C4-dicarboxylate 92.2 0.93 3.2E-05 40.3 10.5 96 436-532 3-105 (155)
308 1pzg_A LDH, lactate dehydrogen 92.1 0.14 4.9E-06 53.0 5.6 136 403-554 9-180 (331)
309 1zem_A Xylitol dehydrogenase; 92.1 0.16 5.6E-06 50.4 5.8 71 404-484 8-91 (262)
310 3k31_A Enoyl-(acyl-carrier-pro 92.1 0.22 7.4E-06 50.6 6.8 72 404-485 31-116 (296)
311 2hjr_A Malate dehydrogenase; m 92.1 0.93 3.2E-05 46.8 11.7 133 403-553 14-178 (328)
312 2c20_A UDP-glucose 4-epimerase 92.1 0.056 1.9E-06 55.5 2.4 72 405-486 3-76 (330)
313 3tl2_A Malate dehydrogenase; c 92.1 1.6 5.4E-05 44.8 13.3 135 403-555 8-176 (315)
314 3phh_A Shikimate dehydrogenase 92.1 0.14 4.9E-06 51.4 5.3 118 403-541 118-240 (269)
315 2g76_A 3-PGDH, D-3-phosphoglyc 92.1 0.11 3.9E-06 53.9 4.7 83 402-504 164-248 (335)
316 2qr3_A Two-component system re 92.1 0.61 2.1E-05 40.5 9.0 95 437-532 4-110 (140)
317 2p91_A Enoyl-[acyl-carrier-pro 92.1 0.21 7.1E-06 50.4 6.6 72 404-485 22-107 (285)
318 2o3j_A UDP-glucose 6-dehydroge 92.1 0.15 5E-06 55.9 5.8 43 404-456 10-54 (481)
319 4dad_A Putative pilus assembly 92.0 0.57 2E-05 41.2 8.8 98 434-532 18-125 (146)
320 2bll_A Protein YFBG; decarboxy 92.0 0.04 1.4E-06 56.9 1.2 69 405-484 2-74 (345)
321 1y81_A Conserved hypothetical 92.0 0.18 6E-06 45.3 5.3 106 402-533 13-124 (138)
322 2ho3_A Oxidoreductase, GFO/IDH 92.0 0.53 1.8E-05 48.4 9.7 107 405-529 3-118 (325)
323 3slg_A PBGP3 protein; structur 92.0 0.068 2.3E-06 56.0 3.0 70 404-484 25-98 (372)
324 1oju_A MDH, malate dehydrogena 92.0 0.97 3.3E-05 45.9 11.5 129 405-551 2-162 (294)
325 2rcy_A Pyrroline carboxylate r 92.0 0.18 6.1E-06 50.0 5.9 87 404-516 5-96 (262)
326 2b4q_A Rhamnolipids biosynthes 92.0 0.11 3.9E-06 52.2 4.5 72 404-485 30-113 (276)
327 1wma_A Carbonyl reductase [NAD 91.9 0.16 5.5E-06 50.3 5.5 73 403-485 4-90 (276)
328 2rjn_A Response regulator rece 91.9 1.1 3.7E-05 39.8 10.7 97 434-531 5-109 (154)
329 1hxh_A 3BETA/17BETA-hydroxyste 91.9 0.16 5.6E-06 50.2 5.5 72 404-485 7-88 (253)
330 3tzq_B Short-chain type dehydr 91.9 0.18 6.1E-06 50.5 5.8 71 404-484 12-92 (271)
331 2dbq_A Glyoxylate reductase; D 91.9 0.11 3.6E-06 54.1 4.3 81 403-504 150-233 (334)
332 2q1s_A Putative nucleotide sug 91.9 0.08 2.7E-06 55.7 3.4 72 404-486 33-108 (377)
333 4dqx_A Probable oxidoreductase 91.9 0.19 6.6E-06 50.5 6.1 73 404-486 28-110 (277)
334 3tjr_A Short chain dehydrogena 91.9 0.18 6E-06 51.5 5.8 72 404-485 32-116 (301)
335 3ohs_X Trans-1,2-dihydrobenzen 91.9 0.65 2.2E-05 47.9 10.3 108 405-529 4-122 (334)
336 3h5n_A MCCB protein; ubiquitin 91.8 0.46 1.6E-05 49.7 9.1 89 403-503 118-235 (353)
337 2hk9_A Shikimate dehydrogenase 91.8 0.079 2.7E-06 53.4 3.1 106 404-526 130-237 (275)
338 2c07_A 3-oxoacyl-(acyl-carrier 91.8 0.23 7.8E-06 50.1 6.6 72 404-485 45-129 (285)
339 2j6i_A Formate dehydrogenase; 91.8 0.13 4.5E-06 54.1 4.9 69 402-489 163-233 (364)
340 1w6u_A 2,4-dienoyl-COA reducta 91.8 0.18 6.2E-06 51.0 5.9 73 404-486 27-113 (302)
341 3ioy_A Short-chain dehydrogena 91.8 0.17 5.9E-06 52.0 5.7 73 404-486 9-96 (319)
342 1yxm_A Pecra, peroxisomal tran 91.8 0.18 6.2E-06 51.1 5.8 73 404-486 19-109 (303)
343 3rwb_A TPLDH, pyridoxal 4-dehy 91.8 0.14 4.8E-06 50.5 4.8 72 404-485 7-88 (247)
344 4dyv_A Short-chain dehydrogena 91.8 0.15 5.3E-06 51.1 5.2 72 404-485 29-110 (272)
345 1ae1_A Tropinone reductase-I; 91.8 0.19 6.4E-06 50.3 5.9 72 404-485 22-107 (273)
346 1pqw_A Polyketide synthase; ro 91.8 0.44 1.5E-05 44.9 8.2 75 402-487 38-117 (198)
347 1vl8_A Gluconate 5-dehydrogena 91.8 0.17 5.7E-06 50.7 5.4 72 404-485 22-107 (267)
348 1l7d_A Nicotinamide nucleotide 91.8 0.058 2E-06 57.3 2.1 49 402-460 171-219 (384)
349 2gdz_A NAD+-dependent 15-hydro 91.7 0.19 6.4E-06 50.1 5.7 72 404-485 8-94 (267)
350 4g81_D Putative hexonate dehyd 91.7 0.14 4.7E-06 51.1 4.7 74 401-484 6-93 (255)
351 3jte_A Response regulator rece 91.7 0.84 2.9E-05 39.9 9.5 95 437-532 4-107 (143)
352 3rkr_A Short chain oxidoreduct 91.7 0.13 4.5E-06 51.1 4.5 72 404-485 30-114 (262)
353 4b79_A PA4098, probable short- 91.7 0.065 2.2E-06 53.0 2.2 70 404-483 12-84 (242)
354 3lyl_A 3-oxoacyl-(acyl-carrier 91.6 0.16 5.3E-06 49.9 5.0 72 404-485 6-90 (247)
355 3pk0_A Short-chain dehydrogena 91.6 0.24 8.2E-06 49.3 6.4 72 404-485 11-96 (262)
356 1tmy_A CHEY protein, TMY; chem 91.6 0.85 2.9E-05 38.3 9.2 96 437-532 3-105 (120)
357 4f6c_A AUSA reductase domain p 91.6 0.11 3.8E-06 55.6 4.2 71 403-485 69-158 (427)
358 3v8b_A Putative dehydrogenase, 91.6 0.2 6.8E-06 50.6 5.8 72 404-485 29-113 (283)
359 1xq1_A Putative tropinone redu 91.6 0.15 5.1E-06 50.7 4.8 72 404-485 15-100 (266)
360 3afn_B Carbonyl reductase; alp 91.6 0.1 3.5E-06 51.4 3.6 72 404-485 8-93 (258)
361 3lua_A Response regulator rece 91.6 1.9 6.4E-05 37.4 11.7 97 435-532 3-111 (140)
362 1xhl_A Short-chain dehydrogena 91.6 0.13 4.5E-06 52.3 4.5 72 404-485 27-114 (297)
363 1uuf_A YAHK, zinc-type alcohol 91.6 0.36 1.2E-05 50.8 8.0 75 402-488 194-268 (369)
364 3mog_A Probable 3-hydroxybutyr 91.6 0.56 1.9E-05 51.2 9.7 41 404-454 6-46 (483)
365 1yj8_A Glycerol-3-phosphate de 91.5 0.16 5.6E-06 53.5 5.3 69 404-488 22-114 (375)
366 3ay3_A NAD-dependent epimerase 91.5 0.027 9.2E-07 56.2 -0.8 68 404-485 3-71 (267)
367 2zat_A Dehydrogenase/reductase 91.5 0.16 5.6E-06 50.3 5.0 71 404-484 15-98 (260)
368 4fc7_A Peroxisomal 2,4-dienoyl 91.5 0.27 9.2E-06 49.3 6.7 73 404-486 28-114 (277)
369 3m1a_A Putative dehydrogenase; 91.5 0.14 4.9E-06 51.3 4.6 72 404-485 6-87 (281)
370 3f1l_A Uncharacterized oxidore 91.5 0.25 8.7E-06 48.7 6.4 73 403-485 12-100 (252)
371 1dbw_A Transcriptional regulat 91.5 1.8 6.3E-05 36.7 11.3 96 436-532 3-105 (126)
372 1xea_A Oxidoreductase, GFO/IDH 91.5 0.24 8.3E-06 50.9 6.5 108 405-530 4-120 (323)
373 2w2k_A D-mandelate dehydrogena 91.5 0.086 2.9E-06 55.2 3.0 88 403-509 163-253 (348)
374 3tpc_A Short chain alcohol deh 91.5 0.15 5.1E-06 50.5 4.7 71 404-484 8-88 (257)
375 3keo_A Redox-sensing transcrip 91.5 0.13 4.5E-06 49.7 4.0 87 402-502 83-172 (212)
376 2rhc_B Actinorhodin polyketide 91.4 0.23 7.8E-06 49.9 6.0 72 404-485 23-107 (277)
377 1orr_A CDP-tyvelose-2-epimeras 91.4 0.18 6.2E-06 51.9 5.4 71 405-486 3-82 (347)
378 2p4h_X Vestitone reductase; NA 91.4 0.11 3.7E-06 53.0 3.7 71 404-485 2-82 (322)
379 4gmf_A Yersiniabactin biosynth 91.4 0.23 7.9E-06 52.4 6.3 112 402-532 6-127 (372)
380 3fbt_A Chorismate mutase and s 91.4 0.21 7.2E-06 50.5 5.6 118 403-540 122-245 (282)
381 3two_A Mannitol dehydrogenase; 91.3 0.2 6.7E-06 52.2 5.6 70 402-488 176-245 (348)
382 1gdh_A D-glycerate dehydrogena 91.3 0.18 6E-06 52.1 5.1 69 402-489 145-214 (320)
383 1t2d_A LDH-P, L-lactate dehydr 91.3 0.22 7.6E-06 51.4 5.9 133 404-554 5-174 (322)
384 4had_A Probable oxidoreductase 91.3 0.36 1.2E-05 50.2 7.6 110 405-531 25-144 (350)
385 1yqd_A Sinapyl alcohol dehydro 91.3 0.44 1.5E-05 49.9 8.4 74 403-488 188-262 (366)
386 3oz2_A Digeranylgeranylglycero 91.3 0.077 2.6E-06 55.5 2.4 54 406-476 7-60 (397)
387 3e05_A Precorrin-6Y C5,15-meth 91.3 1.2 4E-05 42.0 10.7 97 402-512 40-143 (204)
388 3gt7_A Sensor protein; structu 91.3 1.2 4E-05 39.7 10.2 98 434-532 5-111 (154)
389 1zud_1 Adenylyltransferase THI 91.3 0.55 1.9E-05 46.5 8.6 88 403-502 28-143 (251)
390 3pp8_A Glyoxylate/hydroxypyruv 91.3 0.13 4.3E-06 53.1 4.0 67 402-488 138-204 (315)
391 4e5n_A Thermostable phosphite 91.3 0.31 1.1E-05 50.5 7.0 83 403-504 145-229 (330)
392 2dc1_A L-aspartate dehydrogena 91.2 0.23 8E-06 48.6 5.8 102 405-534 2-112 (236)
393 4g2n_A D-isomer specific 2-hyd 91.2 0.43 1.5E-05 49.7 8.0 82 403-504 173-256 (345)
394 1p9l_A Dihydrodipicolinate red 91.2 0.63 2.1E-05 46.0 8.8 105 405-543 2-115 (245)
395 2d1y_A Hypothetical protein TT 91.2 0.23 7.8E-06 49.2 5.7 70 404-485 7-85 (256)
396 3zv4_A CIS-2,3-dihydrobiphenyl 91.2 0.26 8.8E-06 49.6 6.1 72 404-485 6-87 (281)
397 1x13_A NAD(P) transhydrogenase 91.2 0.065 2.2E-06 57.3 1.7 98 403-511 172-292 (401)
398 3don_A Shikimate dehydrogenase 91.1 0.087 3E-06 53.2 2.5 114 403-534 117-235 (277)
399 2nac_A NAD-dependent formate d 91.1 0.12 4.1E-06 54.9 3.7 84 403-504 191-276 (393)
400 1sny_A Sniffer CG10964-PA; alp 91.1 0.17 5.8E-06 50.2 4.6 72 404-485 22-110 (267)
401 2ixa_A Alpha-N-acetylgalactosa 91.1 0.72 2.5E-05 49.7 10.0 113 404-530 21-148 (444)
402 1spx_A Short-chain reductase f 91.0 0.14 4.9E-06 51.2 4.1 72 404-485 7-94 (278)
403 1wdk_A Fatty oxidation complex 91.0 0.4 1.4E-05 55.1 8.2 40 403-452 314-353 (715)
404 3lf2_A Short chain oxidoreduct 91.0 0.29 9.9E-06 48.7 6.3 72 404-485 9-95 (265)
405 1gee_A Glucose 1-dehydrogenase 91.0 0.16 5.4E-06 50.3 4.3 72 404-485 8-93 (261)
406 3op4_A 3-oxoacyl-[acyl-carrier 91.0 0.27 9.4E-06 48.4 6.1 72 404-485 10-91 (248)
407 2pln_A HP1043, response regula 91.0 0.83 2.8E-05 39.6 8.7 94 434-532 16-116 (137)
408 3fr7_A Putative ketol-acid red 91.0 0.099 3.4E-06 56.6 2.9 71 404-489 55-133 (525)
409 4dgs_A Dehydrogenase; structur 91.0 0.4 1.4E-05 49.8 7.4 80 403-505 171-252 (340)
410 2ph3_A 3-oxoacyl-[acyl carrier 91.0 0.23 7.9E-06 48.4 5.4 72 404-485 2-88 (245)
411 4a7p_A UDP-glucose dehydrogena 90.9 0.31 1.1E-05 52.7 6.8 44 402-455 7-50 (446)
412 2d0i_A Dehydrogenase; structur 90.9 0.11 3.7E-06 54.1 3.1 65 403-488 146-211 (333)
413 3mz0_A Inositol 2-dehydrogenas 90.9 0.35 1.2E-05 50.2 7.1 107 405-527 4-120 (344)
414 2pi1_A D-lactate dehydrogenase 90.9 0.067 2.3E-06 55.6 1.5 81 403-504 141-223 (334)
415 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.9 0.19 6.5E-06 50.0 4.8 72 404-485 22-107 (274)
416 3grp_A 3-oxoacyl-(acyl carrier 90.8 0.32 1.1E-05 48.5 6.4 72 404-485 28-109 (266)
417 2qq5_A DHRS1, dehydrogenase/re 90.8 0.25 8.7E-06 48.9 5.6 72 404-485 6-91 (260)
418 3dfu_A Uncharacterized protein 90.8 0.19 6.5E-06 49.2 4.5 34 403-446 6-39 (232)
419 3rih_A Short chain dehydrogena 90.8 0.28 9.5E-06 49.8 6.0 72 404-485 42-127 (293)
420 3gaf_A 7-alpha-hydroxysteroid 90.8 0.25 8.6E-06 48.9 5.5 72 404-485 13-97 (256)
421 3ba1_A HPPR, hydroxyphenylpyru 90.8 0.058 2E-06 56.1 0.9 79 403-504 164-244 (333)
422 3sju_A Keto reductase; short-c 90.8 0.25 8.6E-06 49.6 5.6 73 403-485 24-109 (279)
423 3tfo_A Putative 3-oxoacyl-(acy 90.7 0.18 6.2E-06 50.4 4.5 72 404-485 5-89 (264)
424 2qv0_A Protein MRKE; structura 90.7 0.61 2.1E-05 40.8 7.6 98 434-532 7-111 (143)
425 2z1m_A GDP-D-mannose dehydrata 90.7 0.11 3.7E-06 53.5 2.8 73 404-486 4-84 (345)
426 1rjw_A ADH-HT, alcohol dehydro 90.7 0.44 1.5E-05 49.3 7.5 75 402-488 164-241 (339)
427 2pk3_A GDP-6-deoxy-D-LYXO-4-he 90.6 0.1 3.6E-06 53.2 2.6 71 402-486 11-83 (321)
428 1ydw_A AX110P-like protein; st 90.6 0.97 3.3E-05 47.1 10.2 109 404-529 7-127 (362)
429 3cnb_A DNA-binding response re 90.6 0.98 3.4E-05 39.2 8.8 99 434-532 6-114 (143)
430 2uvd_A 3-oxoacyl-(acyl-carrier 90.6 0.22 7.6E-06 48.9 4.9 72 404-485 5-90 (246)
431 1gpj_A Glutamyl-tRNA reductase 90.6 0.2 6.9E-06 53.5 4.9 71 402-488 166-238 (404)
432 3ftp_A 3-oxoacyl-[acyl-carrier 90.5 0.39 1.3E-05 48.0 6.8 72 404-485 29-113 (270)
433 2i76_A Hypothetical protein; N 90.5 0.16 5.3E-06 51.2 3.7 65 405-489 4-70 (276)
434 1rkx_A CDP-glucose-4,6-dehydra 90.4 0.13 4.5E-06 53.4 3.2 73 404-486 10-89 (357)
435 2ew8_A (S)-1-phenylethanol deh 90.4 0.32 1.1E-05 47.9 5.9 72 404-485 8-90 (249)
436 2d4a_B Malate dehydrogenase; a 90.4 1.9 6.5E-05 44.0 11.9 132 405-554 1-164 (308)
437 3vtf_A UDP-glucose 6-dehydroge 90.3 0.12 4.1E-06 55.7 2.8 71 404-486 22-106 (444)
438 1i24_A Sulfolipid biosynthesis 90.3 0.23 8E-06 52.4 5.1 72 403-485 11-108 (404)
439 1piw_A Hypothetical zinc-type 90.3 0.28 9.6E-06 51.3 5.7 74 402-487 179-253 (360)
440 4hy3_A Phosphoglycerate oxidor 90.3 0.31 1.1E-05 51.1 5.9 82 403-504 176-259 (365)
441 3cz5_A Two-component response 90.3 1 3.4E-05 40.0 8.7 98 435-532 4-109 (153)
442 1h6d_A Precursor form of gluco 90.3 0.66 2.3E-05 49.9 8.7 112 404-531 84-208 (433)
443 3hdv_A Response regulator; PSI 90.2 1.1 3.9E-05 38.6 8.8 97 435-532 6-111 (136)
444 3gg9_A D-3-phosphoglycerate de 90.2 0.15 5.2E-06 53.3 3.5 84 403-505 160-245 (352)
445 1oaa_A Sepiapterin reductase; 90.2 0.38 1.3E-05 47.6 6.3 59 404-472 7-77 (259)
446 3grk_A Enoyl-(acyl-carrier-pro 90.2 0.39 1.3E-05 48.7 6.4 72 404-485 32-117 (293)
447 1pl8_A Human sorbitol dehydrog 90.1 0.7 2.4E-05 48.1 8.5 76 402-489 171-254 (356)
448 2q3e_A UDP-glucose 6-dehydroge 90.1 0.092 3.2E-06 57.3 1.8 42 404-455 6-49 (467)
449 1rpn_A GDP-mannose 4,6-dehydra 90.1 0.17 5.8E-06 51.9 3.7 74 402-485 13-94 (335)
450 2bd0_A Sepiapterin reductase; 90.1 0.21 7.2E-06 48.8 4.2 72 404-485 3-94 (244)
451 3o26_A Salutaridine reductase; 90.1 0.21 7.3E-06 50.5 4.4 74 403-486 12-100 (311)
452 1eq2_A ADP-L-glycero-D-mannohe 90.1 0.15 5.1E-06 51.6 3.2 68 405-485 1-76 (310)
453 3c7a_A Octopine dehydrogenase; 90.1 0.5 1.7E-05 50.2 7.4 71 405-489 4-94 (404)
454 2ydy_A Methionine adenosyltran 90.1 0.12 4.1E-06 52.6 2.5 64 404-485 3-68 (315)
455 3upl_A Oxidoreductase; rossman 90.0 0.53 1.8E-05 50.6 7.5 113 403-531 23-165 (446)
456 4fs3_A Enoyl-[acyl-carrier-pro 90.0 1.1 3.6E-05 44.4 9.4 58 404-471 7-74 (256)
457 3hm2_A Precorrin-6Y C5,15-meth 90.0 1.5 5.1E-05 39.9 9.9 97 402-512 25-128 (178)
458 3k6j_A Protein F01G10.3, confi 90.0 1.4 4.9E-05 47.5 11.0 71 403-489 54-142 (460)
459 3evn_A Oxidoreductase, GFO/IDH 90.0 0.31 1.1E-05 50.3 5.6 110 404-530 6-124 (329)
460 3oid_A Enoyl-[acyl-carrier-pro 89.9 0.26 9E-06 48.9 4.9 72 404-485 5-90 (258)
461 1r6d_A TDP-glucose-4,6-dehydra 89.9 0.26 8.8E-06 50.6 4.9 71 405-486 2-85 (337)
462 2yut_A Putative short-chain ox 89.9 0.32 1.1E-05 45.9 5.3 69 405-485 2-74 (207)
463 3a28_C L-2.3-butanediol dehydr 89.9 0.26 8.8E-06 48.8 4.7 72 404-485 3-89 (258)
464 3i1j_A Oxidoreductase, short c 89.8 0.56 1.9E-05 45.8 7.1 72 404-485 15-102 (247)
465 2q1w_A Putative nucleotide sug 89.8 0.091 3.1E-06 54.2 1.4 71 404-485 22-97 (333)
466 1h5q_A NADP-dependent mannitol 89.8 0.23 7.7E-06 49.1 4.2 72 404-485 15-100 (265)
467 3ctm_A Carbonyl reductase; alc 89.8 0.17 5.9E-06 50.6 3.4 72 404-485 35-119 (279)
468 3t4e_A Quinate/shikimate dehyd 89.8 0.4 1.4E-05 49.2 6.1 118 403-532 148-280 (312)
469 3kkj_A Amine oxidase, flavin-c 89.7 0.17 5.8E-06 48.8 3.2 33 405-447 4-36 (336)
470 3aoe_E Glutamate dehydrogenase 89.7 0.59 2E-05 49.8 7.5 108 403-533 218-342 (419)
471 3g79_A NDP-N-acetyl-D-galactos 89.7 0.34 1.2E-05 52.7 5.8 42 403-454 18-65 (478)
472 1sby_A Alcohol dehydrogenase; 89.7 0.3 1E-05 48.1 5.0 72 404-485 6-92 (254)
473 4egf_A L-xylulose reductase; s 89.7 0.36 1.2E-05 48.1 5.6 72 404-485 21-106 (266)
474 4ibo_A Gluconate dehydrogenase 89.7 0.24 8E-06 49.7 4.3 72 404-485 27-111 (271)
475 1o6z_A MDH, malate dehydrogena 89.7 0.87 3E-05 46.5 8.6 132 405-554 2-167 (303)
476 3ezl_A Acetoacetyl-COA reducta 89.7 0.18 6.3E-06 49.7 3.4 75 401-485 11-99 (256)
477 4hv4_A UDP-N-acetylmuramate--L 89.6 0.41 1.4E-05 52.5 6.5 89 402-510 21-111 (494)
478 3m2t_A Probable dehydrogenase; 89.6 0.53 1.8E-05 49.2 7.1 111 404-531 6-126 (359)
479 3g17_A Similar to 2-dehydropan 89.5 0.041 1.4E-06 56.1 -1.6 95 404-515 3-100 (294)
480 3ec7_A Putative dehydrogenase; 89.5 0.41 1.4E-05 50.1 6.1 108 404-527 24-141 (357)
481 1n7h_A GDP-D-mannose-4,6-dehyd 89.5 0.13 4.5E-06 54.0 2.3 73 404-486 29-115 (381)
482 3ax6_A Phosphoribosylaminoimid 89.5 0.3 1E-05 51.4 5.1 71 404-487 2-72 (380)
483 1x1t_A D(-)-3-hydroxybutyrate 89.5 0.23 7.9E-06 49.2 4.0 72 404-485 5-91 (260)
484 1nvm_B Acetaldehyde dehydrogen 89.5 0.52 1.8E-05 48.4 6.7 94 404-509 5-102 (312)
485 3s2e_A Zinc-containing alcohol 89.5 0.73 2.5E-05 47.6 8.0 76 402-489 166-244 (340)
486 2p5y_A UDP-glucose 4-epimerase 89.4 0.16 5.4E-06 51.7 2.8 69 405-485 2-74 (311)
487 1iz0_A Quinone oxidoreductase; 89.4 0.42 1.4E-05 48.5 6.0 72 402-487 125-198 (302)
488 3snk_A Response regulator CHEY 89.4 1.2 4E-05 38.6 8.2 97 435-532 13-117 (135)
489 1nvt_A Shikimate 5'-dehydrogen 89.4 0.18 6.1E-06 51.2 3.1 71 403-488 128-204 (287)
490 3cg0_A Response regulator rece 89.4 0.96 3.3E-05 39.2 7.7 98 434-532 7-112 (140)
491 3ajr_A NDP-sugar epimerase; L- 89.4 0.16 5.5E-06 51.7 2.8 67 405-486 1-71 (317)
492 1v3u_A Leukotriene B4 12- hydr 89.4 0.91 3.1E-05 46.7 8.6 75 402-487 145-224 (333)
493 2b5w_A Glucose dehydrogenase; 89.3 0.65 2.2E-05 48.4 7.5 72 404-488 174-253 (357)
494 1h2b_A Alcohol dehydrogenase; 89.3 0.64 2.2E-05 48.5 7.4 76 402-488 186-265 (359)
495 4dry_A 3-oxoacyl-[acyl-carrier 89.2 0.32 1.1E-05 49.0 4.9 72 404-485 34-119 (281)
496 3to5_A CHEY homolog; alpha(5)b 89.2 2.1 7.3E-05 37.8 9.8 97 434-532 10-117 (134)
497 3h8v_A Ubiquitin-like modifier 89.2 1 3.6E-05 45.6 8.7 91 403-503 36-163 (292)
498 1l3i_A Precorrin-6Y methyltran 89.2 0.75 2.6E-05 42.4 7.2 92 402-509 33-132 (192)
499 1jvb_A NAD(H)-dependent alcoho 89.2 0.6 2E-05 48.4 7.1 76 402-488 170-251 (347)
500 2j48_A Two-component sensor ki 89.2 0.54 1.9E-05 39.1 5.7 94 437-532 2-102 (119)
No 1
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=99.94 E-value=5.6e-27 Score=248.93 Aligned_cols=211 Identities=18% Similarity=0.146 Sum_probs=170.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++|++|||+|++|+.+++.|. +.|+ |+++|.|+++++ +++.+.++++||++|+++|+++|+++||.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~----------~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELR----------GSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGG----------GSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHH----------hCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 679999999999999999997 7788 999999999999 8889999999999999999999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVR 562 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~ 562 (663)
++++||+.|+.++..+|+++|+.++++|++++++.+.++++|+|.|++|+.+++..+++.+.+ |...+.+.+.++
T Consensus 183 ~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~ 257 (336)
T 1lnq_A 183 VDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDD-----GYEAMFVQDVLA 257 (336)
T ss_dssp ECCSSHHHHHHHHHHHHTTCTTSEEEEECSSGGGHHHHHHTTCSEEECHHHHHHHHHHHTSSC-----SHHHHHHHHHTS
T ss_pred EcCCccHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHcCCCEEEChhHhHHHHHHHHHhC-----ccHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999998887 665555446666
Q ss_pred cccccchhhhcccCCc-chhcccccccchhhhhhhccCCCCCCCcccccCCCCCCCCcCCCCCCceEEEeecC
Q 006034 563 NSMEIQAQEVLSQKDD-QEFDIMKPLQVRVADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGT 634 (663)
Q Consensus 563 ~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 634 (663)
.+++..+.|+.++.+. ..++.+++++.+... +...-.-..+++....|++++++++||++.++|.+..
T Consensus 258 ~~~~~~l~e~~v~~~s~~~Gk~l~el~l~~~~----~~~ii~i~r~~~~~~~P~~~~~l~~gD~liv~g~~~~ 326 (336)
T 1lnq_A 258 EESTRRMVEVPIPEGSKLEGVSVLDADIHDVT----GVIIIGVGRGDELIIDPPRDYSFRAGDIILGIGKPEE 326 (336)
T ss_dssp SCSSCEEEEEECCSSCSSTTCBHHHHCHHHHH----CCEEEEEECSSCEESSCCTTCBCCSSCEEEEEECHHH
T ss_pred CcCCceEEEEEeCCCCCcCCCCHHHccccccc----CeEEEEEEECCEEEECcCCCcEEcCCCEEEEEECHHH
Confidence 6557777787776532 123444443322100 0000000002334445999999999999999998765
No 2
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.93 E-value=4.4e-25 Score=250.60 Aligned_cols=214 Identities=14% Similarity=0.172 Sum_probs=128.5
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCc
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
+.++|++|||+|++|+.+++.|. +.+++|++||.|+++++.+++. +.++++||++|+++|+++|+++|+
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~----------~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~ 194 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLE----------SRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAAR 194 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTT----------TTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCS
T ss_pred ccCCeEEEECCChHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCC
Confidence 57899999999999999999997 7899999999999999999998 999999999999999999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQ 559 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~ 559 (663)
.+++ +.+|+.|+.++.++|+++ +.+++||++++++.+.++++|+|+|++|+.+++..+++.+.. |... .+
T Consensus 195 ~vi~-t~~D~~n~~~~~~ar~~~-~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~-----p~~~---~~ 264 (565)
T 4gx0_A 195 SIIA-NLSDPDNANLCLTVRSLC-QTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATT-----CGAL---AH 264 (565)
T ss_dssp EEEE-CSCHHHHHHHHHHHHTTC-CCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC--------------
T ss_pred EEEE-eCCcHHHHHHHHHHHHhc-CceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcc-----cccc---cc
Confidence 9887 889999999999999999 889999999999999999999999999999999999999988 6543 22
Q ss_pred HHhcccccchhhhcccCCc-chhcccccccchhhhhhhccCCCCCCCcccccCCCCCCCCcCCCCCCceEEEeecCCCcc
Q 006034 560 LVRNSMEIQAQEVLSQKDD-QEFDIMKPLQVRVADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGTNNFL 638 (663)
Q Consensus 560 ~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 638 (663)
.+...++..+.|+.++ +. ..++++.+++.+... +..-..-..+++.. .|++++++++||++++.|.+..-+-+
T Consensus 265 ~~~~~~~~~l~e~~v~-~s~l~G~~l~el~~~~~~----~~~vi~i~r~g~~~-~p~~~~~l~~GD~L~v~g~~~~l~~~ 338 (565)
T 4gx0_A 265 ILDSFGNLQIAELPVH-GTPFAGKTIGESGIRQRT----GLSIIGVWERGSLT-TPQRETVLTEQSLLVLAGTKSQLAAL 338 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcccCCceEEEEEEC-CCccCCCCHHHcCcchhc----CCEEEEEEECCEEe-CCCCCcEeCCCCEEEEEeCHHHHHHH
Confidence 2334567778888776 32 223444443322110 00000001134445 89999999999999999988776544
Q ss_pred cc
Q 006034 639 DQ 640 (663)
Q Consensus 639 ~~ 640 (663)
.+
T Consensus 339 ~~ 340 (565)
T 4gx0_A 339 EY 340 (565)
T ss_dssp --
T ss_pred HH
Confidence 33
No 3
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=99.93 E-value=1.7e-25 Score=225.17 Aligned_cols=209 Identities=18% Similarity=0.145 Sum_probs=166.9
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
+.++|++|||+|++|+.+++.|. +.|+ |+++|+|+++++.+. .+..+++||++|+++|+++++++||.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~----------~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELR----------GSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHST----------TSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCCEEEEECCChHHHHHHHHHH----------hCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcE
Confidence 46789999999999999999997 7788 999999999998888 78999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQL 560 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~ 560 (663)
+++++++|+.|+.++..+|+++|+++++++++++++.+.++++|+|.+++|+.++|..+++.+.. |...+.+.+.
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~-----~~~~~~~~~~ 149 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDD-----GYEAMFVQDV 149 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHTSSC-----SHHHHHHHHH
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHHHCCCCEEECHHHHHHHHHHHHHcC-----ccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988877 6655544355
Q ss_pred HhcccccchhhhcccCCc-chhcccccccchh------hhhhhccCCCCCCCcccccCCCCCCCCcCCCCCCceEEEeec
Q 006034 561 VRNSMEIQAQEVLSQKDD-QEFDIMKPLQVRV------ADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNG 633 (663)
Q Consensus 561 ~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 633 (663)
++.+++..+.|+.++.+. ...+++.+++.+. ..+.| +++....|++++++++||+++++|...
T Consensus 150 ~~~~~~~~~~e~~V~~~s~~~Gk~l~el~~~~~~~~~vi~i~R----------~~~~~~~p~~~~~l~~GD~l~v~g~~~ 219 (234)
T 2aef_A 150 LAEESTRRMVEVPIPEGSKLEGVSVLDADIHDVTGVIIIGVGR----------GDELIIDPPRDYSFRAGDIILGIGKPE 219 (234)
T ss_dssp HC---CCEEEEEECCTTBTTTTCBHHHHCHHHHHCCEEEEEEE----------TTEEEESCCTTCBCCTTCEEEEEECHH
T ss_pred hcCCCCceEEEEEECCCCccCCCCHHHhhhhhhcCeEEEEEEE----------CCeEEeCCCCCCEECCCCEEEEEECHH
Confidence 555445667777766432 1233333332221 11111 223333489999999999999999876
Q ss_pred CCC
Q 006034 634 TNN 636 (663)
Q Consensus 634 ~~~ 636 (663)
.-+
T Consensus 220 ~l~ 222 (234)
T 2aef_A 220 EIE 222 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 4
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.92 E-value=6.5e-25 Score=241.79 Aligned_cols=133 Identities=15% Similarity=0.126 Sum_probs=121.7
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--cCCCEEEecCCCHHHHHhcCCCCC
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--~~~~vi~GD~~~~~~L~~a~i~~a 478 (663)
+..++++|+|+|++|..+|+.|+ ++++|++||.|+++++.+++ .+..+++||++|+++|+++|++++
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~-----------~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLE-----------QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHT-----------TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHHHHHHHHhh-----------hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhh
Confidence 45678999999999999999995 46899999999999999987 578899999999999999999999
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
|+++++|+||+.|+++|+.||+++++ ++++++|++++.+.+++.|+|.+++|+..++..+.+++.+
T Consensus 302 D~~ia~T~~De~Ni~~~llAk~~gv~-kvIa~vn~~~~~~l~~~~gid~visp~~~~a~~I~~~i~~ 367 (461)
T 4g65_A 302 DVFIALTNEDETNIMSAMLAKRMGAK-KVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRR 367 (461)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHCSSSSCEEECHHHHHHHHHHHHHHH
T ss_pred cEEEEcccCcHHHHHHHHHHHHcCCc-cccccccccchhhhhhccccceeeCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999987 9999999999999999999999999997666666555544
No 5
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=99.92 E-value=2.3e-24 Score=199.27 Aligned_cols=136 Identities=21% Similarity=0.311 Sum_probs=130.5
Q ss_pred cCCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 400 YEGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 400 ~~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.+.++|++|||+|++|+.+++.|. +.|++|+++|.|+++++.+++.+..+++||++|+++|+++++++||
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~----------~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLL----------ASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCS
T ss_pred ccCCCCEEEECcCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCC
Confidence 367899999999999999999998 7899999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
.+++++++|+.|..++..+|+++|+.++++|++++++.+.++++|+|.|++|+.+++.++++.+.+
T Consensus 74 ~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~a~~i~~~l~~ 139 (140)
T 3fwz_A 74 WLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLET 139 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHHHTTCSEEEEHHHHHHHHHHHHHHC
T ss_pred EEEEECCChHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCCEEECchHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999988764
No 6
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.91 E-value=3.1e-24 Score=232.80 Aligned_cols=161 Identities=28% Similarity=0.465 Sum_probs=152.4
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++||+|||+|++|+.+++.|. +.|++|++||.|+++++.+++.|.++++||++|+++|+++|+++||.+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~----------~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLL----------SSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred CCCeEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEE
Confidence 4579999999999999999998 789999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLV 561 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~ 561 (663)
|++++||+.|+.++..+|+++|+++|++|++++++...|+++|||.||.|+.++|.+++++++..+|+|+..+....+.+
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~~lg~~~~~~~~~~~~~ 152 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVF 152 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHTTCSSCEETTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcccccchhhh
Q 006034 562 RNSMEIQAQEV 572 (663)
Q Consensus 562 ~~~~~~~~~e~ 572 (663)
|+.++..+.+.
T Consensus 153 r~~~~~~~~~~ 163 (413)
T 3l9w_A 153 RRFNIQMVEEM 163 (413)
T ss_dssp HHHHHHHHHHH
T ss_pred HHhHHHHHHHH
Confidence 87765555444
No 7
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=99.90 E-value=1.4e-24 Score=216.16 Aligned_cols=201 Identities=17% Similarity=0.149 Sum_probs=164.0
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++|||+|++|+.+++.|. +.|++|+++|.|+++++.+.+ .+..+++||++|++.|+++++++||.+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~----------~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSML----------SRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECCHHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 6999999999999999998 789999999999999998765 58899999999999999999999999999
Q ss_pred EcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Q 006034 484 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVRN 563 (663)
Q Consensus 484 ~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~ 563 (663)
++++|+.|..++..+|+++|..++++|++++++.+.++++|+|.|++|+.+++..+++.+.. |...+.+ ..
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~d~vi~p~~~~~~~l~~~~~~-----~~~~~~~----~~ 142 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFP-----DEFSSII----PL 142 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEECCCSGGGHHHHHHHTCEECCCHHHHHHHHHHHHHCT-----TSCEECS----CC
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEEEeCcchHHHHHHCCCCEEECHHHHHHHHHHHHhcc-----CCceEEE----Ee
Confidence 99999999999999999999989999999999999999999999999999999999988866 4332221 22
Q ss_pred ccccchhhhcccCCc-chhcccccccchh----hhhhhccCCCCCCCcccccCCCCCCCCcCCCCCCceEEEeecCC
Q 006034 564 SMEIQAQEVLSQKDD-QEFDIMKPLQVRV----ADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGTN 635 (663)
Q Consensus 564 ~~~~~~~e~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 635 (663)
.++..+.|+.++.+. ...+++.+++.+. ..+.| +++.. .|+++++|++||+++++|.+..-
T Consensus 143 ~~~~~~~e~~v~~~s~~~gk~l~el~~~~~~~i~~i~R----------~~~~~-~p~~~~~l~~gD~l~v~g~~~~~ 208 (218)
T 3l4b_C 143 EQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVR----------GGVLV-VPRGDTEILSGDKLYVIVSAEAK 208 (218)
T ss_dssp STTEEEEEEECCTTCSSTTCBTTTSCCCTTEEEEEEEE----------SSCEE-CCCTTCBCCTTEEEEEEEEGGGH
T ss_pred CCCcEEEEEEECCCCcccCCCHHHCCCCCCcEEEEEEE----------CCEEE-cCCCCCEECCCCEEEEEECHHHH
Confidence 334777787776532 2244444443221 11111 22222 49999999999999999987653
No 8
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.90 E-value=5.9e-24 Score=234.11 Aligned_cols=208 Identities=15% Similarity=0.145 Sum_probs=156.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
||+|||+|++|+.+|+.|. ++|++|++||.|+++++.+.+ .+..+++||++|+++|++||+++||.+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~----------~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLV----------GENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEECCSHHHHHHHHHTC----------STTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 7999999999999999997 789999999999999999876 58999999999999999999999999999
Q ss_pred EcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHH------HcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHH
Q 006034 484 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLK------KAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFL 557 (663)
Q Consensus 484 ~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~------~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~ 557 (663)
+|+||+.|+.+|+.||+++|..++++|++++++....+ ..|+|.+|+|+.+++..+.+.+.. |...+..
T Consensus 75 ~t~~De~Nl~~~~~Ak~~~~~~~~iar~~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~-----p~~~~~~ 149 (461)
T 4g65_A 75 VTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQY-----PGALQVV 149 (461)
T ss_dssp CCSCHHHHHHHHHHHHHHHCCSSEEEECCCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTS-----TTCSEEE
T ss_pred EcCChHHHHHHHHHHHHhcCCccceeEeccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccC-----CCeEEEE
Confidence 99999999999999999999989999999998754322 379999999999888887777655 4222111
Q ss_pred HHHHhcccccchhhhcccCCcchhcccccccchhhhhhhccCCCCCCCc---ccccCCCCCCCCcCCCCCCceEEEeecC
Q 006034 558 RQLVRNSMEIQAQEVLSQKDDQEFDIMKPLQVRVADIVEAEKTIPSTSN---DDKLSREDNTDTAGEDAKGVLYCELNGT 634 (663)
Q Consensus 558 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 634 (663)
--.++..++.++..+.+. .+ .+....++.+...+...... .+.-...|+++|++++||+|.|++....
T Consensus 150 ---~f~~g~~~l~e~~v~~~s----~l--~g~~l~~l~~~~p~~~~~I~aI~R~g~~iiP~g~t~i~~gD~v~~i~~~~~ 220 (461)
T 4g65_A 150 ---SFAEEKVSLVAVKAYYGG----PL--VGNALSALREHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNH 220 (461)
T ss_dssp ---EETTTTEEEEEEECCTTS----SS--TTCBHHHHHHTSTTSCEEEEEEEETTEEECCCTTCBCCTTCEEEEEEETTT
T ss_pred ---EeccceEEEEEEEecCCC----ee--cCCcHHHHHhhCCCCceEEEEEEECCeeccCCCCceecCCCEEEEEeccch
Confidence 011245566666554321 11 12233333321111111111 1222456999999999999999998765
Q ss_pred CC
Q 006034 635 NN 636 (663)
Q Consensus 635 ~~ 636 (663)
-+
T Consensus 221 i~ 222 (461)
T 4g65_A 221 IR 222 (461)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 9
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.89 E-value=7.9e-24 Score=240.29 Aligned_cols=198 Identities=20% Similarity=0.236 Sum_probs=123.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+|++|||+|++|+.+++.|. +.|++|++||.|+++++.+. ++++||++|+++|+++|+++||.+++
T Consensus 349 ~~viIiG~G~~G~~la~~L~----------~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~ 414 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLD----------RKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIV 414 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEE
T ss_pred CCEEEECCCHHHHHHHHHHH----------HCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEE
Confidence 89999999999999999998 78999999999999987543 89999999999999999999999999
Q ss_pred EcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Q 006034 484 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVRN 563 (663)
Q Consensus 484 ~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~ 563 (663)
+++||+.|+.+++.+|+++|+++++||++++++.+.++++|+|.|++|+..++..+++.+.. ++..+.
T Consensus 415 ~~~~d~~ni~~~~~ak~l~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~~~~i~~~~~~-----~~~~~~------- 482 (565)
T 4gx0_A 415 TTNDDSTNIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEH-----KESAFL------- 482 (565)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEEEESSTTSHHHHHHHTCSEEEEHHHHHHHHHHHHHHC-----C------------
T ss_pred ECCCchHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEccchHHHHHHHHHhcc-----hhhhhh-------
Confidence 99999999999999999999999999999999999999999999999999999999998875 433221
Q ss_pred ccccchhhhcccCCcchhcccccccch------hhhhhhccCCCCCCCcccccCCCCCCCCcCCCCCCceEEEeecCCC
Q 006034 564 SMEIQAQEVLSQKDDQEFDIMKPLQVR------VADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGTNN 636 (663)
Q Consensus 564 ~~~~~~~e~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 636 (663)
.+++...++..++. ..++++++++.+ ...+.|.+ +++....|++++++|+||++++.|.+..-+
T Consensus 483 ~~~~~~~~v~~~s~-~~Gk~l~el~l~~~~~~~v~aI~R~~--------~~~~~~~p~~~~~l~~GD~liv~g~~~~i~ 552 (565)
T 4gx0_A 483 SEGMAVFRRPLPPA-MAGKTIAETRLRPLTGCSIVAIEAPD--------RADILISPPPETILAEGARLILIGTSEQEK 552 (565)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred hcCeEEEEEcCCCC-cCCCCHHHcchhhhcCCEEEEEEeCC--------CCceEECcCCCCEECCCCEEEEEECHHHHH
Confidence 22333344433321 123444444322 22222211 134444599999999999999999877655
No 10
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=99.86 E-value=3.8e-21 Score=177.51 Aligned_cols=132 Identities=18% Similarity=0.219 Sum_probs=127.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+|++|+|+|++|+.+++.|. +.|++|+++|.|+++++.+.+.+..+++||++|++.|++++++++|.++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~----------~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT----------AAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 468999999999999999998 7899999999999999999999999999999999999999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
+++++|+.|..++..+|+.+ ..+++++++++++.+.++++|+|.|++|+.++|.++++.+.+
T Consensus 76 ~~~~~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~i~~ 137 (141)
T 3llv_A 76 ITGSDDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEFEEAGANLVVLVADAVKQAFMDKIKK 137 (141)
T ss_dssp ECCSCHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHHHHTTCSEEEEHHHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHHHHcCCCEEECHHHHHHHHHHHHHhC
Confidence 99999999999999999999 779999999999999999999999999999999999999988
No 11
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=99.86 E-value=2.3e-21 Score=181.70 Aligned_cols=134 Identities=14% Similarity=0.093 Sum_probs=123.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCC-hHHHHHHH---hcCCCEEEecCCCHHHHHhcCCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-PSVVKESR---KLGFPILYGDASRPAVLLSAGITS 477 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d-~~~~~~~~---~~~~~vi~GD~~~~~~L~~a~i~~ 477 (663)
.++|++|||+|++|+.+++.|. +.|++|+++|+| +++++.+. +.+..+++||++|+++|+++++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~----------~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLN----------QRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTT
T ss_pred CCCcEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhh
Confidence 3579999999999999999997 789999999998 56665554 357999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 478 PKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 478 a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
||.+++++++|+.|..++..+|+++|..+++++++++++.+.++++|+|.|++|+.+++..+++.+..
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~~~~ 139 (153)
T 1id1_A 72 CRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNG 139 (153)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEcHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999987765
No 12
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.4e-20 Score=180.07 Aligned_cols=137 Identities=20% Similarity=0.234 Sum_probs=129.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhc-CCCCCc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA-GITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a-~i~~a~ 479 (663)
..+|++|||+|++|+.+++.|. +. |++|+++|.|+++++.+++.|..+++||++|++.|+++ +++++|
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~----------~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELR----------ARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHH----------HHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHH----------hccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 4679999999999999999997 67 99999999999999999988999999999999999999 999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcC
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFG 548 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~ 548 (663)
.+++++++++.|..++..+|+.+|+.+++++++++++.+.+++.|+|.+++|+.++|..+++.+++.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~ 176 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQLE 176 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999988554
No 13
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.84 E-value=1.2e-21 Score=207.33 Aligned_cols=294 Identities=19% Similarity=0.178 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHHHHHHHhhcCChHHH----HHhhh--HHHHHHHHHHHHHHHHHHhhhCCCCCcchhhHHHHhhcccccc
Q 006034 32 DVKVLSEWGILFLLFEMGLELSLARL----KALAK--FAFGMGLTQVVLSTLAFTAFELPPNGAVGTRILEFLFHSRSDL 105 (663)
Q Consensus 32 ~l~~l~~lgl~lllF~~Glel~~~~l----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~~~ 105 (663)
...-+.+-.+++++|.+|+|+|.+.+ ++.+| .....++.++++|+++.. .++
T Consensus 59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~-----------------~~~----- 116 (388)
T 1zcd_A 59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL-----------------AFN----- 116 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG-----------------GGC-----
T ss_pred HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH-----------------HHh-----
Confidence 34568899999999999999999877 66555 367778888888877632 222
Q ss_pred ccccCHHHHHHHHHHHHhhhHHHHHHHHhhcCC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHH
Q 006034 106 VNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGE-LPTRFGSATLGILLLQDIAVVPLLVILPVLESQVSESVWPMLVKES 184 (663)
Q Consensus 106 ~~~~~~~~alllg~~ls~TS~~vv~~il~~~~~-~~~~~g~~~l~~~~~~Di~~i~~l~i~~~~~~~~~~~~~~~~~~~~ 184 (663)
.....+..-..+...|+.+....++...+. .++..++.+++.+++||+.++++++++.. ++.+. ..+.
T Consensus 117 ---~~~~~~~~gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt----~~~~~-~~l~--- 185 (388)
T 1zcd_A 117 ---YADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT----NDLSM-ASLG--- 185 (388)
T ss_dssp ---CSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC----CCCCH-HHHH---
T ss_pred ---cCChhhhhhhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc----CCccH-HHHH---
Confidence 122334455566677999999999988765 44556689999999999999999988632 11221 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHhhhhccCC-----chhhH
Q 006034 185 LKALAGLGLLSLGGKYLLRRVFEVVAEARSSEAFVALCLLTVAGTSLLTQKLGFSDTLGAFLAGAILAET-----NFRTQ 259 (663)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~l~~~~~~~~l~~~~G~s~~lgAflaGl~l~~~-----~~~~~ 259 (663)
..+..+ ...+.. + |.+.++......+ .+.+++.++..|+|+.+|+|++|+++|.. +..++
T Consensus 186 -~~~~~~-----~~~~~l----~---r~~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~ 250 (388)
T 1zcd_A 186 -VAAVAI-----AVLAVL----N---LCGARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKR 250 (388)
T ss_dssp -HHHHHH-----HHHHHH----H---HTTCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHH
T ss_pred -HHHHHH-----HHHHHH----H---HhcchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHH
Confidence 111111 111111 1 1122222222222 22455677999999999999999999984 35688
Q ss_pred HHhhhhch-hhhhHHHH-HHHhccccChh---HHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCChHHH
Q 006034 260 IEADIRPF-RGLLLGLF-FVTTGSSIDIE---LLFREWPNVLALLAGLIIIKTLIISAIGPRV----------GLTLQES 324 (663)
Q Consensus 260 i~~~~~~~-~~~~~plF-Fv~vG~~l~~~---~l~~~~~~~l~~~~~~~l~K~~~~~~~~~~~----------g~~~r~~ 324 (663)
++++++++ ..+++|+| |+..|.++|.. .+.+ +..+.+++..+++|+++++..++.. |++|++.
T Consensus 251 le~~l~p~v~~~ilPlFaFanaGv~l~~~~~~~l~~--~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~ 328 (388)
T 1zcd_A 251 LEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTS--ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQI 328 (388)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHH--HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeeecccchhhccC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHH
Confidence 99999999 56899999 99999999974 2222 2223455667899999855555544 8999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHcCC--CchhhHHHHHHHHHHHHhhhHHHHH
Q 006034 325 VRIGLLLSQGGEFAFVVFSLANRLGV--LPLELNKLLIIVVVLSMALTPLLNE 375 (663)
Q Consensus 325 ~~~g~~l~~~G~~~lvla~~a~~~g~--i~~~~~~~lv~~vvlt~ii~pi~~~ 375 (663)
..+|+.++.+++++++++.++++.+. ..++.+..++.++++|++++|++.+
T Consensus 329 ~~vg~L~gigftmsL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~ 381 (388)
T 1zcd_A 329 MVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLR 381 (388)
T ss_dssp TTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGT
T ss_pred HHHHHHhccchHHHHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876 3556688888888899999988764
No 14
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=99.73 E-value=8.1e-18 Score=191.88 Aligned_cols=262 Identities=13% Similarity=0.111 Sum_probs=158.1
Q ss_pred CCCchhhHHHHHHHHHHHHhhhHHHHHHhHHHHhhhhhhcCCcchhhhhcccCCCCcEEEEcCCcchHH--HHHHhcccc
Q 006034 349 GVLPLELNKLLIIVVVLSMALTPLLNEIGRWAADFIDDKFGSEDKVEEMVNYEGSEPVVIVGFGQMGQV--LANLLSAPL 426 (663)
Q Consensus 349 g~i~~~~~~~lv~~vvlt~ii~pi~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~viI~G~g~~g~~--la~~L~~~~ 426 (663)
+.+.+.+-.++..+.+++..++-++..+..+. .+ .+++ ...+.++|+||||+++.++. +.++|..
T Consensus 10 ~~~~~~~~~IlgGI~lFa~~ig~liel~~~r~-~~-~G~y---------~~~~~k~HIIIcG~~~~~~v~~fL~El~~-- 76 (798)
T 3naf_A 10 KQIEDKLEEILSKLYHIENELARIKKLLGERK-KY-GGSY---------SAVSGRKHIVVCGHITLESVSNFLKDFLH-- 76 (798)
T ss_dssp ---------------------------------CC-CSSC---------CCCCSSEEEEEESCCCHHHHHHHHHHHTC--
T ss_pred HHhhhhheehhHHHHHHHHHHHHHHHHHHHHH-hh-CCcc---------ccccCCCeEEEEcCCCHHHHHHHHHHHHh--
Confidence 33444554555555566665555444332211 00 0111 11357899999999986553 4555531
Q ss_pred cCCCCCCCCCCCEEEEeCChH--HHHHHHh---cCCCEEEecCCCHHHHHhcCCCCCcEEEEEcC--------CHHHHHH
Q 006034 427 ASGSDGNTVGWPFVAFDLNPS--VVKESRK---LGFPILYGDASRPAVLLSAGITSPKAVMIMYT--------DKKRTIE 493 (663)
Q Consensus 427 ~~~~~~~~~~~~vvvid~d~~--~~~~~~~---~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~--------dd~~n~~ 493 (663)
.+ +...+.++|+++.++. ..+...+ .+..+++||++++++|++||+++|+++++..+ +|.+|+.
T Consensus 77 -~~--~~~~~~~IVIL~~~~p~~eLe~lL~~~~~~V~fI~Gdat~~e~L~RAgI~~A~aVIIla~~~~~d~~~~Da~nIl 153 (798)
T 3naf_A 77 -KD--RDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM 153 (798)
T ss_dssp -TT--SCCCCEEEEEEESSCCCHHHHHHHHHTTTTEEEEECCSSSHHHHHHTTGGGCSEEEECCCTTCSCHHHHHHHHHH
T ss_pred -hc--ccccCCcEEEEeCCCCcHHHHHHhhcccCceEEEEcCCCCHHHHHhcCHhhCCEEEEECCccccCCccchHHHHH
Confidence 00 0112458999987532 2333332 56889999999999999999999999999885 5889999
Q ss_pred HHHHHHHhCCCCcEEEEecChhhHHHHHH------cCCCeEEcCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccc--
Q 006034 494 AVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVRNSM-- 565 (663)
Q Consensus 494 ~~~~~r~~~~~~~iia~~~~~~~~~~l~~------~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~-- 565 (663)
+++++|+++|+++|+|++.++++.+.+++ +|+|.||+|+...++.||+.++. |....++.+++....
T Consensus 154 ~vLsar~lnP~i~IIa~~~~~en~~~L~~~~sw~~AGAd~VI~~~el~g~LLAqs~l~-----PGls~~i~~LLs~~~~~ 228 (798)
T 3naf_A 154 RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLA-----QGLSTMLANLFSMRSFI 228 (798)
T ss_dssp HHHHHHHHSTTCCEEEEESCTTGGGSGGGCTTCCTTTTCEEEEHHHHHHHHHHHHHHS-----TTHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHCCCCCEEEEECCHhHHHHHHhcccchhcCCCEEEehHHHHHHHHHHHhcC-----CCHHHHHHHHhcccccc
Confidence 99999999999999999999999999987 79999999999999999999999 999999999886522
Q ss_pred ----ccchhhhcccCCcc-----hhcccccccchhhhhhhccCCCCCCC----------cccccCCCCCCCCcCCCCCCc
Q 006034 566 ----EIQAQEVLSQKDDQ-----EFDIMKPLQVRVADIVEAEKTIPSTS----------NDDKLSREDNTDTAGEDAKGV 626 (663)
Q Consensus 566 ----~~~~~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~d~~ 626 (663)
+.|+.|........ ......+ .+..++.+.-..++.-+ .++++...|+++++|++||++
T Consensus 229 ~~~~~~Wi~eY~~g~g~Eiy~v~l~s~~~G--~Tf~ea~~~lr~k~gaiLIGI~r~~~~~~g~iilNP~~d~~L~~GD~L 306 (798)
T 3naf_A 229 KIEEDTWQKYYLEGVSNEMYTEYLSSAFVG--LSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 306 (798)
T ss_dssp CCCSCSHHHHHHHHHTBCCEEEECCGGGTT--CBHHHHHHHHHHHTCCCEEEEEEECSSSCEEEEESCCTTCBCCTTCEE
T ss_pred ccchhHHHHHHhcccCcEEEEEeCCcccCC--CCHHHHHHHHHHhCCEEEEEEEeccCCCCCeEEECCCCCCEECCCCEE
Confidence 23444332211110 0011112 22222211000000111 134578889999999999999
Q ss_pred eEEEeec
Q 006034 627 LYCELNG 633 (663)
Q Consensus 627 ~~~~~~~ 633 (663)
.+.|.+.
T Consensus 307 ivIa~~~ 313 (798)
T 3naf_A 307 FFIASDA 313 (798)
T ss_dssp EECCBTT
T ss_pred EEEeCCH
Confidence 9988764
No 15
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.70 E-value=1.6e-16 Score=145.45 Aligned_cols=131 Identities=16% Similarity=0.216 Sum_probs=121.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++|+|+|++|+.+++.|. +.|++|+++|+|+++.+.+.+ .+..++.||.++++.+++++++++|.++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~----------~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLS----------EKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 47999999999999999997 678999999999999988875 4778899999999999999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
+++++++.|..++..+|+.+++ +++++++++++.+.+++.|+|.+++|+...+..+++.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~v~~p~~~~~~~~~~~~~~ 136 (140)
T 1lss_A 75 AVTGKEEVNLMSSLLAKSYGIN-KTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIER 136 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCC-CEEEECSSTTHHHHHHHTTCSEEECHHHHHHHHHHHHHTC
T ss_pred EeeCCchHHHHHHHHHHHcCCC-EEEEEecCHhHHHHHHHcCCCEEECHHHHHHHHHHHHhcc
Confidence 9999999999999999998876 8999999999999999999999999999999999888766
No 16
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=99.70 E-value=5e-17 Score=149.46 Aligned_cols=132 Identities=20% Similarity=0.303 Sum_probs=123.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.++++|+|+|.+|+.+++.|. +.|++|+++|+|+++.+.+.+.+..++.||.+|++.+++++++++|.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~----------~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELH----------RMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHH----------HTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 357999999999999999997 6789999999999998888777788899999999999999999999999
Q ss_pred EEcCCH-HHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 483 IMYTDK-KRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 483 ~~~~dd-~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
.+++++ +.|..++..+|+.+++ +++++++++.+.+.++++|+|.+++|+..++..+++.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~vi~p~~~~~~~l~~~~~~ 138 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIP-NIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSD 138 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCS-EEEEECCSHHHHHHHHHHTCSEEECHHHHHHHHHHHHHHH
T ss_pred ECCCCchHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHcCCCEEECccHHHHHHHHHHHhh
Confidence 999986 8899999999999987 9999999999999999999999999999999999999987
No 17
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.69 E-value=6.3e-17 Score=151.77 Aligned_cols=134 Identities=21% Similarity=0.266 Sum_probs=123.6
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH-hcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~-~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
...++++|+|+|++|+.+++.|. +.|++|+++|+|+++.+.++ +.+..++.||.++++.|++++++++|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~----------~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLAS----------SSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCC
Confidence 46679999999999999999997 78899999999999988887 67788899999999999999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHHHHHHHHHHH
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 545 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~ 545 (663)
.+++++++++.|..++..+|+++|..+++++++++.+.+.++++|+| +++|++.++..+++.+..
T Consensus 87 ~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~-vi~p~~~~a~~l~~~l~~ 151 (155)
T 2g1u_A 87 MVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPEKIKIFEENGIK-TICPAVLMIEKVKEFIIG 151 (155)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE-EECHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc-EEcHHHHHHHHHHHHHhc
Confidence 99999999999999999999988888999999999999999999999 999999888888877654
No 18
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=99.68 E-value=4.5e-17 Score=183.78 Aligned_cols=220 Identities=14% Similarity=0.101 Sum_probs=154.0
Q ss_pred CCCcEEEEcCCcchHH--HHHHhcccccCCCCCCCCCCCEEEEeCCh--HHHHHHHh---cCCCEEEecCCCHHHHHhcC
Q 006034 402 GSEPVVIVGFGQMGQV--LANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRK---LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~--la~~L~~~~~~~~~~~~~~~~vvvid~d~--~~~~~~~~---~~~~vi~GD~~~~~~L~~a~ 474 (663)
.++||||||+++.++. +.+++.. . .+...+.+||+++.++ +..+.+.+ .+..+++||++++++|++|+
T Consensus 2 gk~HIIVcG~~~~~sV~~FL~Ef~h---~--d~~~~~~~VVIL~~~~P~~ELe~lL~~~~~~V~fI~Gdat~~edL~RA~ 76 (726)
T 3mt5_A 2 GRKHIVVCGHITLESVSNFLKDFLH---K--DRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 76 (726)
T ss_dssp --CEEEEEESCCHHHHHHHHHHHHH---H--CTTTTTCEEEEECSSCCCHHHHTTHHHHCSSEEEECCCTTSHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHh---c--cccccCCcEEEEeCCCCCHHHHHHHHhhcCceEEEEeCCCCHHHHHhcC
Confidence 4789999999988875 3454431 0 0012355899998754 23333222 67889999999999999999
Q ss_pred CCCCcEEEEEcC--------CHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHH------cCCCeEEcCchHHHHHHH
Q 006034 475 ITSPKAVMIMYT--------DKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQLG 540 (663)
Q Consensus 475 i~~a~~vv~~~~--------dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~------~Gad~vi~p~~~~~~~la 540 (663)
+++|+++++..+ +|.+|+..++++|+++|+++|+|++.++++...+++ +|+|.||+|+...+..||
T Consensus 77 I~~A~aVIIlad~~~~d~~~sDa~nIl~vLsar~lnP~i~IVA~~~~~en~~~L~ri~sw~~AGAd~VI~~~el~g~LLA 156 (726)
T 3mt5_A 77 IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIA 156 (726)
T ss_dssp GGGCSEEEEECCTTCSCHHHHHHHHHHHHHHHHHHCTTSCEEEEESCHHHHGGGGGSTTCCTTTTCEEEEHHHHHHHHHH
T ss_pred hhhcCEEEEEcCccccCCcccHHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHhhccchhhcCCCEEEehHHHHHHHHH
Confidence 999999999875 589999999999999999999999999999999984 899999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhcc------cccchhhhcccCCcc--h---hcccccccchhhhhhhccCCCCCCC----
Q 006034 541 SKLLKGFGVMSDDVTFLRQLVRNS------MEIQAQEVLSQKDDQ--E---FDIMKPLQVRVADIVEAEKTIPSTS---- 605 (663)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~e~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~l---- 605 (663)
+.++. |....++.+++... .+.|+.|........ . .....+ .+..|+.+.-...+.-+
T Consensus 157 qs~l~-----PGlst~i~~LLs~~s~~~~~~~~wi~EY~~g~g~EiY~v~l~s~~~G--~Tf~ea~~~lr~k~gaiLIGI 229 (726)
T 3mt5_A 157 QSCLA-----QGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVG--LSFPTVCELCFVKLKLLMIAI 229 (726)
T ss_dssp HHHHS-----TTHHHHHHTTTSCCCCCCCCSSSHHHHHHHHHTCEEEEEECCGGGTT--SBHHHHHHHHHHTTCCEEEEE
T ss_pred HHhcC-----CCHHHHHHHHHhcccccccchhHHHHHHhccCCceEEEEeCCcccCC--CCHHHHHHHHHhhCCEEEEEE
Confidence 99999 99999988888642 233444432111100 0 011112 22222211000000000
Q ss_pred ------cccccCCCCCCCCcCCCCCCceEEEeec
Q 006034 606 ------NDDKLSREDNTDTAGEDAKGVLYCELNG 633 (663)
Q Consensus 606 ------~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 633 (663)
.++++...|+++++|++||++.+.|.+.
T Consensus 230 ~r~~~~~~g~iilNP~~d~~I~~GD~LiVIa~s~ 263 (726)
T 3mt5_A 230 EYKSANRESRILINPGNHLKIQEGTLGFFIASDA 263 (726)
T ss_dssp EC------CCCEESCCTTCBCCTTCEEEEEESCH
T ss_pred EecccCCCCeEEECCCCCcEECCCCEEEEEECCH
Confidence 1345778899999999999999888654
No 19
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=99.37 E-value=5.5e-13 Score=155.06 Aligned_cols=221 Identities=13% Similarity=0.053 Sum_probs=144.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHH--H-H--hcCCCEEEecCCCHHHHHhcCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKE--S-R--KLGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~--~-~--~~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
.++||||||+++.++ +...|++.+..+- .+.+.+||++..++...+. . . .....+++||+++++.|++|+++
T Consensus 2 gk~HivvcG~~~~~~-l~~fL~ef~~~~~--~~~~~~vVil~~~~p~~el~~~l~~~~~~v~~i~Gs~~~~~dL~ra~i~ 78 (722)
T 4hpf_A 2 GKKFIVVCGNITVDS-VTAFLRNFLRDKS--GEINTEIVFLGETPPSLELETIFKCYLAYTTFISGSAMKWEDLRRVAVE 78 (722)
T ss_dssp -CCEEEEESCCCHHH-HHHHHTTC----------CCEEECCBSCC------CCCCTTTTSEECCBCCSSCHHHHHHHTGG
T ss_pred CCCEEEEECCCCHHH-HHHHHHHHhhhhh--hcCCCeEEEEeCCCCCHHHHHHHhhhCceEEEEEcCCCCHHHHHhcCcc
Confidence 368999999998875 4444543221111 1335678877654432221 1 1 12345678999999999999999
Q ss_pred CCcEEEEEcC--------CHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHH------cCCCeEEcCchHHHHHHHHH
Q 006034 477 SPKAVMIMYT--------DKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQLGSK 542 (663)
Q Consensus 477 ~a~~vv~~~~--------dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~------~Gad~vi~p~~~~~~~la~~ 542 (663)
+|+++++..+ +|..|++.++.+|+++|+++++++..++++...++. +|+|.||++++..+..||+.
T Consensus 79 ~A~av~Il~~~~~~d~~~~D~~~il~~laik~~~p~~~iivq~~~~~n~~~~~~~~~~~~~gad~VI~~~el~~~lla~s 158 (722)
T 4hpf_A 79 SAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTRIIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQG 158 (722)
T ss_dssp GSSEEEECCCSSCSCHHHHHHHHHHHHHHHHHHCTTCCEEEECSSGGGGGHHHHSTTCCTTTTCEEECHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCccCCchhhHHHHHHHHHHHHHhCCCCCEEEEECChhhHHHHHhhhhhhhcCCCeEEeHHHHHHHHHHHH
Confidence 9999998876 488999999999999999999999999998888776 69999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhcccc------cchhhhcccCCcc-----hhcccccccchhhhhh----hcc-C----CC-
Q 006034 543 LLKGFGVMSDDVTFLRQLVRNSME------IQAQEVLSQKDDQ-----EFDIMKPLQVRVADIV----EAE-K----TI- 601 (663)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~e~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~-~----~~- 601 (663)
++. |.....+.++++.... .|..+........ ......+ .+..++. +.- . .+
T Consensus 159 ~~~-----PG~stli~~Ll~~~~~~~~~~~~w~~~Y~~g~~~eiy~~~~~~~~~G--~tf~e~~~~~~~~~~~iligi~~ 231 (722)
T 4hpf_A 159 CLV-----PGLCTFLTSLFVEQNKKVMPKQTWKKHFLNSMKNKILTQRLSDDFAG--MSFPEVARLCFLKMHLLLIAIEY 231 (722)
T ss_dssp HHS-----TTHHHHHHHTTCCCCSCCCCSSHHHHHHHHHHTCBCCEEECCGGGTT--CBHHHHHHHHHHHSCCEEEEEEC
T ss_pred hcC-----CCHHHHHHHHHhcccccccchhhHHHHHhcccCceEEEeeCCcccCC--CCHHHHHHHHHhhcCeEEEEeec
Confidence 999 9888888888765421 1222211100000 0011111 1222221 100 0 00
Q ss_pred --CCCCcccccCCCCCCCCcCCCCCCceEEEee
Q 006034 602 --PSTSNDDKLSREDNTDTAGEDAKGVLYCELN 632 (663)
Q Consensus 602 --~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 632 (663)
...-.++++...|+++++|++||++.|.+..
T Consensus 232 ~~~~~~~~~~i~lNP~~~~~i~~~D~~~~Ia~~ 264 (722)
T 4hpf_A 232 KSLFTDGFCGLILNPPPQVRIRKNTLGFFIAET 264 (722)
T ss_dssp -------CCCCEESCCTTCBCCTTCEEEEEBSC
T ss_pred ccccccCCCeEEECCCCCeEECCCCEEEEEECC
Confidence 0111245577889999999999999998754
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.19 E-value=6.9e-06 Score=71.66 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=78.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++|+|.|.+|+.+++.|. +.| ++|+++|+++++.+.+.+.+...+.+|.+|++.++++ ++++|.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~----------~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~v 73 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLK----------TSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA-LGGFDAV 73 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHH----------HCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred cCeEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH-HcCCCEE
Confidence 357999999999999999997 677 8999999999999988888889999999999988876 6789999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHH
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLD 519 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~ 519 (663)
+.+++.. .+..+...+++.+ .+.+-...+.+..+.
T Consensus 74 i~~~~~~-~~~~~~~~~~~~g--~~~~~~~~~~~~~~~ 108 (118)
T 3ic5_A 74 ISAAPFF-LTPIIAKAAKAAG--AHYFDLTEDVAATNA 108 (118)
T ss_dssp EECSCGG-GHHHHHHHHHHTT--CEEECCCSCHHHHHH
T ss_pred EECCCch-hhHHHHHHHHHhC--CCEEEecCcHHHHHH
Confidence 8888653 3344455555554 234433444443333
No 21
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.66 E-value=7.5e-05 Score=75.64 Aligned_cols=102 Identities=11% Similarity=0.049 Sum_probs=75.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-----HHHHHH----------------------hc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-----VVKESR----------------------KL 455 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-----~~~~~~----------------------~~ 455 (663)
.++++|+|+|++|...++.|. +.|.+|+|||.+.. ..+.+. +.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll----------~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLM----------PTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTK 82 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHG----------GGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------hCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhccccccccccc
Confidence 468999999999999999997 89999999998753 222222 21
Q ss_pred -CC-CEEEecCCCHHHH---HhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhC-CCCcEEEEecChhhHH
Q 006034 456 -GF-PILYGDASRPAVL---LSAGITSPKAVMIMYTDKKRTIEAVQRLRLAF-PAIPIYARAQDMMHLL 518 (663)
Q Consensus 456 -~~-~vi~GD~~~~~~L---~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~-~~~~iia~~~~~~~~~ 518 (663)
+. .++.++.. ++.| .+ ++.++.|+++|+|++.|..++..||+.+ .+ ..+.++++++...
T Consensus 83 g~i~~~i~~~~~-~~dL~~l~~--~~~adlViaat~d~~~n~~I~~~Ar~~f~~~-i~VNvvd~pel~~ 147 (274)
T 1kyq_A 83 NEIYEYIRSDFK-DEYLDLENE--NDAWYIIMTCIPDHPESARIYHLCKERFGKQ-QLVNVADKPDLCD 147 (274)
T ss_dssp CCCSEEECSSCC-GGGGCCSST--TCCEEEEEECCSCHHHHHHHHHHHHHHHCTT-SEEEETTCGGGBS
T ss_pred CCeeEEEcCCCC-HHHHhhccc--CCCeEEEEEcCCChHHHHHHHHHHHHhcCCC-cEEEECCCcccCe
Confidence 23 55666543 3333 23 5689999999999999999999999983 23 4677888888765
No 22
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.57 E-value=0.00013 Score=71.54 Aligned_cols=96 Identities=10% Similarity=0.048 Sum_probs=69.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-HHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRKL-GFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
..++++|+|+|++|..-++.|. +.|.+|++|+.+.. ..+.+.+. +..++.++.. ...++++|
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll----------~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~------~~dL~~ad 93 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFL----------QEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG------EEDLLNVF 93 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHG----------GGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC------GGGSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC------HhHhCCCC
Confidence 3468999999999999999997 78999999987654 34555543 4566655444 23567899
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL 517 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~ 517 (663)
.||++|+|++.|..++..+| .+ + -+.+++++++.
T Consensus 94 LVIaAT~d~~~N~~I~~~ak-~g--i-~VNvvD~p~~~ 127 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQHIK-ND--Q-LVNMASSFSDG 127 (223)
T ss_dssp EEEECCCCTHHHHHHHHHSC-TT--C-EEEC-----CC
T ss_pred EEEECCCCHHHHHHHHHHHh-CC--C-EEEEeCCcccC
Confidence 99999999999999998887 43 2 35566666554
No 23
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=97.56 E-value=3.6e-07 Score=89.12 Aligned_cols=132 Identities=8% Similarity=-0.024 Sum_probs=89.2
Q ss_pred cCCCHHHHHhcCCCCCc------EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCCCeEEcCchHHH
Q 006034 463 DASRPAVLLSAGITSPK------AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETS 536 (663)
Q Consensus 463 D~~~~~~L~~a~i~~a~------~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~~~~ 536 (663)
|..|++.+.+.+++++| .+++++++|+.|.+.++. |+.+.+ ++|++++++.+...+++.|+|.++
T Consensus 42 ~~a~~~ll~ee~i~~~d~~l~~~i~v~~t~~de~n~L~~ll-k~aGa~-~VIa~~~~~~~~~vl~~~gi~~vi------- 112 (205)
T 1vct_A 42 EIAEEVLELEERIDLLNYQLMMHSVLAARNVKEAEQVITIL-QIANAI-EDISNAAGDLAKMVLEGVELHPVI------- 112 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHTTCCCCHHH-------
T ss_pred HHHHHHHHHHHHHHHhhhhhceeeeeecCChhhHHHHHHHH-HHcCCC-EEEcccchHHHHHHHHhcCCCHHH-------
Confidence 44678888899999988 888888888999988875 888766 888899899999999999998554
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHhcccccchhhhcccCCc-chhcccccccchh------hhhhhccCCCCCCCcccc
Q 006034 537 LQLGSKLLKGFGVMSDDVTFLRQLVRNSMEIQAQEVLSQKDD-QEFDIMKPLQVRV------ADIVEAEKTIPSTSNDDK 609 (663)
Q Consensus 537 ~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~ 609 (663)
+..++ . .+..+.++.++.+. ..++++.+++.+. ..+.| +++
T Consensus 113 ----~~~~r-----------------~-~~~~~~e~~v~~~s~~~GktL~el~l~~~~gv~IvaI~R----------~g~ 160 (205)
T 1vct_A 113 ----KETIL-----------------E-GEEIIGKIQVYPESVIVGKTLGELDLATNTGVWIIAVRR----------GKR 160 (205)
T ss_dssp ----HHHHH-----------------H-SSSEEEEEECCTTCTTTTCBHHHHCHHHHHSCEEEEEEE----------TTE
T ss_pred ----HHHHH-----------------h-ccCeEEEEEECCCCccCCCCHHHcCCCccCCEEEEEEEE----------CCE
Confidence 11111 0 12233333333221 2244444444332 22222 344
Q ss_pred cCCCCCCCCcCCCCCCceEEEeecCC
Q 006034 610 LSREDNTDTAGEDAKGVLYCELNGTN 635 (663)
Q Consensus 610 ~~~~~~~~~~~~~~d~~~~~~~~~~~ 635 (663)
....|+++|+|++||++.++|+...-
T Consensus 161 ~i~~P~~dt~L~~GD~Liv~g~~~~i 186 (205)
T 1vct_A 161 WIFGPNENFKIRAGDVLIGRGTRTSI 186 (205)
T ss_dssp EEESCCTTCBCCTTCEEEEEECHHHH
T ss_pred EEeCCCCCCEECCCCEEEEEECHHHH
Confidence 55579999999999999999987653
No 24
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=97.33 E-value=0.00072 Score=78.31 Aligned_cols=122 Identities=18% Similarity=0.113 Sum_probs=84.2
Q ss_pred cCCCCcEEEEcCCcc------hHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cCCCEEEecCCCHHH
Q 006034 400 YEGSEPVVIVGFGQM------GQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAV 469 (663)
Q Consensus 400 ~~~~~~viI~G~g~~------g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~~~vi~GD~~~~~~ 469 (663)
+..++|+|||+.|.. =+.+..-|++ +-. +..+-.++|++..++-..+.+.. ....++.|++.+.+.
T Consensus 382 ~~~~nhivvc~~~~~~~~~~gL~~fi~PLRa---~~~-~~~el~pIViL~~~~~~~~~w~~i~~Fp~Vy~~~GSpl~~~D 457 (722)
T 4hpf_A 382 YKFRNHIVACVFGDAHSAPMGLRNFVMPLRA---SNY-TRKELKDIVFIGSLDYLQREWRFLWNFPQIYILPGCALYSGD 457 (722)
T ss_dssp CCCCSCEEEEECCCTTSCCCCSHHHHGGGGB---TTS-CGGGCCCEEEEECHHHHHHHGGGGTTCSSEEEEESCTTCHHH
T ss_pred ccccCCEEEEeccCcccccccchhheeeccc---ccc-ccccCCCEEEEeCCCCCHHHHHHHhcCCCEEEEECCcCCHHH
Confidence 457899999997652 2344444541 000 01123467777654433334443 235678999999999
Q ss_pred HHhcCCCCCcEEEEEcCC----------HHHHHHHHHHHHHh-------CCCCcEEEEecChhhHHHHHHcCC
Q 006034 470 LLSAGITSPKAVMIMYTD----------KKRTIEAVQRLRLA-------FPAIPIYARAQDMMHLLDLKKAGA 525 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~d----------d~~n~~~~~~~r~~-------~~~~~iia~~~~~~~~~~l~~~Ga 525 (663)
|++||+..|+.+|+...+ |.+++.+.+..+++ ++++++++...++.+.+.+....-
T Consensus 458 L~ragi~~a~~vVIl~~~~~~~~~~~~~D~~tI~~~~~I~~l~~~~~~~~~~i~iitEL~~~sN~~fl~~~~~ 530 (722)
T 4hpf_A 458 LHAANIEQCSMCAVLSPPPQPSSNQTLVDTEAIMATLTIGSLQIDEKSNCRKVPILTELKNPSNIHFIEQLGG 530 (722)
T ss_dssp HHHTTGGGCSEEEEECCCCCC-----CCSHHHHHHHHHHHSCCC-------CCCEEEECSSGGGHHHHHHHHT
T ss_pred HHhcCcccccEEEEEcCCCCCcccchhhhHHHHHHHHHHHHHHhhhhccCCCCcEEEEecCcccchhhccccc
Confidence 999999999999887621 66788899999888 477889999999999999876443
No 25
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=97.17 E-value=0.0008 Score=68.17 Aligned_cols=89 Identities=19% Similarity=0.217 Sum_probs=69.0
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
+++|.|. |.+|+.+++.|. +. |++|+++++++++.+.+.+.+..++.||.+|++.++++ ++++|.|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~v 70 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLL----------KKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA-FAGVSKL 70 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHT----------TTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred eEEEEcCCchHHHHHHHHHH----------HhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH-HhcCCEE
Confidence 5889987 999999999997 55 89999999999887777777889999999999999876 5678988
Q ss_pred EEEcCC---HHHHHH----HHHHHHHhCCC
Q 006034 482 MIMYTD---KKRTIE----AVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~d---d~~n~~----~~~~~r~~~~~ 504 (663)
+-+... ++.|+. ++..+++.+.+
T Consensus 71 i~~a~~~~~~~~n~~~~~~l~~a~~~~~~~ 100 (287)
T 2jl1_A 71 LFISGPHYDNTLLIVQHANVVKAARDAGVK 100 (287)
T ss_dssp EECCCCCSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEcCCCCcCchHHHHHHHHHHHHHHHcCCC
Confidence 876543 223443 34455665543
No 26
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=97.16 E-value=0.3 Score=50.64 Aligned_cols=50 Identities=16% Similarity=0.137 Sum_probs=32.1
Q ss_pred HHHHHHHHhccCCCcCCchhHHHHHHHHHHHHHHHHhhcCChHHHHHhhhH
Q 006034 13 GFFFAGIVLNQLGIIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKF 63 (663)
Q Consensus 13 g~ilaGillGp~glv~~~~~l~~l~~lgl~lllF~~Glel~~~~l~~~~~~ 63 (663)
-.+++++++|.+-. +..+.++......+.++||..|+.++++++++..|+
T Consensus 22 l~i~~~~~lg~~~P-~~~~~~~~~i~~~l~~~mf~~G~~l~~~~l~~~~~~ 71 (332)
T 3zux_A 22 LWAALFAAAAFFAP-DTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKH 71 (332)
T ss_dssp HHHHHHHHHHHHCG-GGTGGGGGGHHHHHHHHHHHHHHHCCGGGGHHHHHS
T ss_pred HHHHHHHHHHHHcc-hhhhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHhC
Confidence 34566666664200 001123345567889999999999999999865544
No 27
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.07 E-value=0.0024 Score=67.54 Aligned_cols=111 Identities=16% Similarity=0.064 Sum_probs=84.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+-+|+|+|.|.+|+.+++.|. ++++|.+.|.++++.+.+.+ ....+..|.+|++.|+++ ++++|.|
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~-----------~~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~-~~~~DvV 81 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLK-----------DEFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEV-MKEFELV 81 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT-----------TTSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHH-HTTCSEE
T ss_pred CccEEEEECCCHHHHHHHHHHh-----------cCCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHH-HhCCCEE
Confidence 3446999999999999999995 45789999999999988765 456788899999999886 7899999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEecC----hhhHHHHHHcCCCeE
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD----MMHLLDLKKAGATDA 528 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~----~~~~~~l~~~Gad~v 528 (663)
|.+++.. .+..++..+-+.+.+ .+-...+ .+..+..+++|+..+
T Consensus 82 i~~~p~~-~~~~v~~~~~~~g~~--yvD~s~~~~~~~~l~~~a~~~g~~~i 129 (365)
T 3abi_A 82 IGALPGF-LGFKSIKAAIKSKVD--MVDVSFMPENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp EECCCGG-GHHHHHHHHHHHTCE--EEECCCCSSCGGGGHHHHHHTTCEEE
T ss_pred EEecCCc-ccchHHHHHHhcCcc--eEeeeccchhhhhhhhhhccCCceee
Confidence 8888764 456677777777643 3433332 245566778887544
No 28
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=97.06 E-value=0.0014 Score=66.15 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=67.3
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
+++|.|. |.+|+.+++.|. +. |++|+++++++++.+.+.+.+..++.||.+|++.++++ ++++|.|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 69 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLM----------KTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA-LQGVEKL 69 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHT----------TTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred CEEEEcCCchHHHHHHHHHH----------hhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH-HhCCCEE
Confidence 4789987 999999999997 55 89999999999887777677889999999999999876 5678988
Q ss_pred EEEcCCH-----HHHHHHHHHHHHhCCC
Q 006034 482 MIMYTDK-----KRTIEAVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~dd-----~~n~~~~~~~r~~~~~ 504 (663)
+-+...+ .....+...+++.+.+
T Consensus 70 i~~a~~~~~~~~~~~~~l~~a~~~~~~~ 97 (286)
T 2zcu_A 70 LLISSSEVGQRAPQHRNVINAAKAAGVK 97 (286)
T ss_dssp EECC--------CHHHHHHHHHHHHTCC
T ss_pred EEeCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 7665432 1223344556666543
No 29
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.04 E-value=0.00048 Score=65.87 Aligned_cols=72 Identities=17% Similarity=0.246 Sum_probs=59.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++++|.|. |.+|+.+++.|. +.|++|++++++++..+.....+..++.+|.+|++.++++ ++++|.++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 72 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAV----------QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT-VAGQDAVI 72 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH-HTTCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------HCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH-HcCCCEEE
Confidence 47999998 999999999997 6789999999998875443345688999999999988775 56789888
Q ss_pred EEcC
Q 006034 483 IMYT 486 (663)
Q Consensus 483 ~~~~ 486 (663)
.+..
T Consensus 73 ~~a~ 76 (206)
T 1hdo_A 73 VLLG 76 (206)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 7765
No 30
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=97.02 E-value=0.00046 Score=79.16 Aligned_cols=167 Identities=18% Similarity=0.091 Sum_probs=104.5
Q ss_pred cCCCCcEEEEcCCcc------hHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cCCCEEEecCCCHHH
Q 006034 400 YEGSEPVVIVGFGQM------GQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAV 469 (663)
Q Consensus 400 ~~~~~~viI~G~g~~------g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~~~vi~GD~~~~~~ 469 (663)
+..++|+|||++|.- =+.+..-|+. +.+ ..++-.++|++...+-..+.+.. ....++.|++...+.
T Consensus 398 ~~~~nHivvC~~~~~~~~~~gl~~fv~PLRa---~~~-~~~~l~~IVil~~~~~~~~~w~~i~~Fp~Vy~v~Gspl~~~d 473 (798)
T 3naf_A 398 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRA---SNF-HYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRAD 473 (798)
T ss_dssp SCCCSCEEEEEECCSSSCCCCTHHHHHHHHC---SSS-CSTTCCCEEEEBCHHHHHHHHTTTTTSSSEEBCBSCTTCHHH
T ss_pred hccCCCEEEEEecCCCcchhhhHHhhhhhhc---ccC-CccccCCEEEECCCCcCHHHHHHhhCCCceEEecCCCCCHHH
Confidence 578899999999853 3557777762 111 00123478888763333344443 246678899999999
Q ss_pred HHhcCCCCCcEEEEEcCC----------HHHHHHHHHHHHH---------------------------------------
Q 006034 470 LLSAGITSPKAVMIMYTD----------KKRTIEAVQRLRL--------------------------------------- 500 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~d----------d~~n~~~~~~~r~--------------------------------------- 500 (663)
|++|||+.|+.+|+..+. |..++++++..|.
T Consensus 474 L~~anI~~a~~~VIls~~~~~~~~~~l~D~~~il~~lni~~m~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (798)
T 3naf_A 474 LRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQP 553 (798)
T ss_dssp HHHTTSTTCSEEEEEESSCTTCCCSSSTTHHHHHHHHHHHHCCCC-----------------------------------
T ss_pred HHHhCHHhCCEEEEEcCCCCCCCChhhhhHHHHHhhhhhhhhccccccccccccccccccccccccccccccccchhhcc
Confidence 999999999998888542 4566766666555
Q ss_pred ---hCCCCcEEEEecChhhHHHHHHc-----CCCeEEcCchHHHHHHHH----HHHHhcCCCHHHHHHHHHHHhcccccc
Q 006034 501 ---AFPAIPIYARAQDMMHLLDLKKA-----GATDAILENAETSLQLGS----KLLKGFGVMSDDVTFLRQLVRNSMEIQ 568 (663)
Q Consensus 501 ---~~~~~~iia~~~~~~~~~~l~~~-----Gad~vi~p~~~~~~~la~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (663)
.+++++++....++.|.+.+... +.+....|.+.+|..... .++..--+.+..++.+.+++..+...+
T Consensus 554 ~~~~~~~ipiitEL~~~~ni~fl~~~~~~~~~~~~~~~~~fa~G~~fs~s~ldsl~~~~y~n~~~~~il~~lvtGg~~~~ 633 (798)
T 3naf_A 554 SITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPE 633 (798)
T ss_dssp ---CTTCCCEEEEESSTTGGGGGSCCTTCCTTCCGGGSHHHHHTSEEETTHHHHHHHHHHHCTHHHHHHHHHHSCSCHHH
T ss_pred ccccCCCCceEEEecCCCccccccccCCCccCcceeecccccccceeHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCcHH
Confidence 35678899999999998888662 233334444333332221 122211223677777777776664444
Q ss_pred hh
Q 006034 569 AQ 570 (663)
Q Consensus 569 ~~ 570 (663)
.+
T Consensus 634 ~e 635 (798)
T 3naf_A 634 LE 635 (798)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 31
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.01 E-value=0.0017 Score=68.81 Aligned_cols=112 Identities=16% Similarity=0.101 Sum_probs=81.4
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
...++++|+|.|.+|+.+++.|. +. .++.+.|+|+++++.+.+. ...+..|..|.+.++++ ++++|.
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~----------~~-~~V~V~~R~~~~a~~la~~-~~~~~~d~~~~~~l~~l-l~~~Dv 80 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLK----------DE-FDVYIGDVNNENLEKVKEF-ATPLKVDASNFDKLVEV-MKEFEL 80 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHT----------TT-SEEEEEESCHHHHHHHTTT-SEEEECCTTCHHHHHHH-HTTCSC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHH----------cC-CeEEEEECCHHHHHHHHhh-CCeEEEecCCHHHHHHH-HhCCCE
Confidence 45678999999999999999997 44 8899999999999988764 34567889998888876 668999
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecC----hhhHHHHHHcCCCeE
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD----MMHLLDLKKAGATDA 528 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~----~~~~~~l~~~Gad~v 528 (663)
||.+++... +..++..+-+.+ ..++-...+ .+..+..++.|+..+
T Consensus 81 VIn~~P~~~-~~~v~~a~l~~G--~~~vD~s~~~~~~~~l~~~Ak~aG~~~l 129 (365)
T 2z2v_A 81 VIGALPGFL-GFKSIKAAIKSK--VDMVDVSFMPENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp EEECCCHHH-HHHHHHHHHHTT--CCEEECCCCSSCGGGGHHHHHHTTCEEE
T ss_pred EEECCChhh-hHHHHHHHHHhC--CeEEEccCCcHHHHHHHHHHHHcCCEEE
Confidence 988877543 334444554444 345544432 245677888888654
No 32
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.96 E-value=0.0009 Score=68.89 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=67.6
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEe--------cCCCHHHHHhcCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYG--------DASRPAVLLSAGIT 476 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~G--------D~~~~~~L~~a~i~ 476 (663)
+|.|+|.|.+|..++..|. +.|++|+++|+|+++.+.+.+.+..+... +.++++-+.+ .++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 73 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLH----------QGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH-QNE 73 (316)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT-TSC
T ss_pred eEEEECcCHHHHHHHHHHH----------hCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc-cCC
Confidence 6999999999999999997 68899999999999999888776544321 1112211111 245
Q ss_pred CCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHH
Q 006034 477 SPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLK 521 (663)
Q Consensus 477 ~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l~ 521 (663)
++|.+++++.++.. ..+...++. +.++..++...+.....+.+.
T Consensus 74 ~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~ 118 (316)
T 2ew2_A 74 QVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLE 118 (316)
T ss_dssp CCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHT
T ss_pred CCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHH
Confidence 89999999987543 333333333 344533444445444434443
No 33
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.94 E-value=0.0021 Score=70.14 Aligned_cols=96 Identities=13% Similarity=-0.019 Sum_probs=72.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-HHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.++++|+|+|+.|...++.|. +.|.+|+++|.+.. ..+.+.+ .+..++.++..+ ..+++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~----------~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~------~~l~~~~l 75 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLL----------EAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE------TLLDSCWL 75 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG------GGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCc------cccCCccE
Confidence 357999999999999999998 78999999998643 3344443 457777776543 23468999
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL 517 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~ 517 (663)
||++++|++.|..++..||+.+. + +..+++++..
T Consensus 76 Vi~at~~~~~n~~i~~~a~~~~i--~-vn~~d~~e~~ 109 (457)
T 1pjq_A 76 AIAATDDDTVNQRVSDAAESRRI--F-CNVVDAPKAA 109 (457)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTC--E-EEETTCTTSS
T ss_pred EEEcCCCHHHHHHHHHHHHHcCC--E-EEECCCcccC
Confidence 99999999899999999999862 2 4456666553
No 34
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.92 E-value=0.0028 Score=65.29 Aligned_cols=95 Identities=17% Similarity=0.201 Sum_probs=70.6
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-HHH---HHHhcCCCEEEecCCCHHHHHhcCCC
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVK---ESRKLGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~---~~~~~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
..++++|.|. |.+|+.+++.|. +.|++|++++++++ +.+ .+...+..++.||.+|++.++++ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a-~~ 78 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSL----------KLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVEL-MK 78 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHH----------HTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHH-HT
T ss_pred CCCeEEEECCCchHHHHHHHHHH----------HCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHH-Hc
Confidence 3457999996 999999999997 67899999999874 333 33457899999999999998876 45
Q ss_pred CCcEEEEEcCCH--HHHHHHHHHHHHhC-CCCcEE
Q 006034 477 SPKAVMIMYTDK--KRTIEAVQRLRLAF-PAIPIY 508 (663)
Q Consensus 477 ~a~~vv~~~~dd--~~n~~~~~~~r~~~-~~~~ii 508 (663)
.+|.|+.+.+.. .....++..+++.+ .+ ++|
T Consensus 79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v 112 (318)
T 2r6j_A 79 KVDVVISALAFPQILDQFKILEAIKVAGNIK-RFL 112 (318)
T ss_dssp TCSEEEECCCGGGSTTHHHHHHHHHHHCCCC-EEE
T ss_pred CCCEEEECCchhhhHHHHHHHHHHHhcCCCC-EEE
Confidence 689888877642 22334556667765 44 444
No 35
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.91 E-value=0.0039 Score=64.03 Aligned_cols=114 Identities=12% Similarity=0.114 Sum_probs=76.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|+|++|+.+++.|. ..|.+|++.|+++++.+.+.+.+..++. .+.+++. ++++|.|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~-l~~aDvV 219 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFA----------ALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEH-VKDIDIC 219 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHH-STTCSEE
T ss_pred CCCEEEEEcccHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHH-hhCCCEE
Confidence 3467999999999999999997 7889999999999887777665654432 1223332 5789999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEecCh--hhHHHHHHcCCCeEEcCchH
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDM--MHLLDLKKAGATDAILENAE 534 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~--~~~~~l~~~Gad~vi~p~~~ 534 (663)
+.+++....|- ...+.+.|...++-.+..+ ...+..++.|+..+..|...
T Consensus 220 i~~~p~~~i~~---~~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~pg~~ 271 (300)
T 2rir_A 220 INTIPSMILNQ---TVLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLAPGLP 271 (300)
T ss_dssp EECCSSCCBCH---HHHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCHH
T ss_pred EECCChhhhCH---HHHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEECCCCC
Confidence 99988632221 2334555554444444332 11266677899777677543
No 36
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.91 E-value=0.0022 Score=65.43 Aligned_cols=73 Identities=26% Similarity=0.337 Sum_probs=60.4
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHH--HHHHhcCCCEEEecCCCHHHHHhcCCCCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVV--KESRKLGFPILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~--~~~~~~~~~vi~GD~~~~~~L~~a~i~~a 478 (663)
+++++|.|. |.+|+.+++.|. +.| ++|++++++++.. +.+...+..++.||.+|++.++++ ++.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~----------~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL----------EDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA-LNGA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTC
T ss_pred CCEEEEECCCchHHHHHHHHHH----------hcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH-HhcC
Confidence 357999998 999999999997 566 9999999998763 445567899999999999999876 4568
Q ss_pred cEEEEEcC
Q 006034 479 KAVMIMYT 486 (663)
Q Consensus 479 ~~vv~~~~ 486 (663)
|.++.+.+
T Consensus 74 d~vi~~a~ 81 (299)
T 2wm3_A 74 YATFIVTN 81 (299)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 98887765
No 37
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.88 E-value=0.0017 Score=65.98 Aligned_cols=89 Identities=15% Similarity=0.067 Sum_probs=69.7
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+|+|.|. |.+|+.+++.|. +. |++|+++++++++.+.+.+.+..++.||.+|++.++++ ++++|.|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~----------~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~-~~~~d~vi 70 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAI----------ANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA-FKGMDTVV 70 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHH----------HTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHH-TTTCSEEE
T ss_pred EEEEEcCCchHHHHHHHHHh----------hCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHH-HhCCCEEE
Confidence 4899996 999999999997 44 99999999999987777677899999999999999875 56889888
Q ss_pred EEcCC---HHHHH----HHHHHHHHhCCC
Q 006034 483 IMYTD---KKRTI----EAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~d---d~~n~----~~~~~~r~~~~~ 504 (663)
-+... ...|+ .++..+++.+.+
T Consensus 71 ~~a~~~~~~~~~~~~~~~l~~aa~~~gv~ 99 (289)
T 3e48_A 71 FIPSIIHPSFKRIPEVENLVYAAKQSGVA 99 (289)
T ss_dssp ECCCCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeCCCCccchhhHHHHHHHHHHHHHcCCC
Confidence 77653 22333 345556666644
No 38
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.88 E-value=0.0024 Score=65.44 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=69.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCC-----hHHHHHH---HhcCCCEEEecCCCHHHHHhcC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-----PSVVKES---RKLGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d-----~~~~~~~---~~~~~~vi~GD~~~~~~L~~a~ 474 (663)
++|+|.|. |.+|+.+++.|. +.|++|++++++ +++.+.+ ...+..++.||.+|++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~- 73 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASI----------SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA- 73 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH-
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------hCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH-
Confidence 47999996 999999999997 678999999998 5554433 346889999999999999876
Q ss_pred CCCCcEEEEEcCCH------HHHHHHHHHHHHhC-CCCcEE
Q 006034 475 ITSPKAVMIMYTDK------KRTIEAVQRLRLAF-PAIPIY 508 (663)
Q Consensus 475 i~~a~~vv~~~~dd------~~n~~~~~~~r~~~-~~~~ii 508 (663)
++.+|.|+.+.... .....++..+++.+ .+ ++|
T Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~-~~v 113 (313)
T 1qyd_A 74 LKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK-RFL 113 (313)
T ss_dssp HTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS-EEE
T ss_pred HhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc-eEE
Confidence 56789888776532 23344556677765 44 444
No 39
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.85 E-value=0.0063 Score=63.13 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=74.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
..+|.|+|.|.+|..+++.|. +.|++|++.|+|+++.+.+.+.|..+. ++.+-+ ++++|.|+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~l~~~g~~~~----~~~~e~----~~~aDvVi 92 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLC----------EAGYALQVWNRTPARAASLAALGATIH----EQARAA----ARDADIVV 92 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTTCEEE----SSHHHH----HTTCSEEE
T ss_pred CCEEEEECccHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHCCCEee----CCHHHH----HhcCCEEE
Confidence 357999999999999999998 789999999999999999988765332 233222 35789999
Q ss_pred EEcCCHHHHHHHH---HHHHHhCCCCcEEEEecC--hhh----HHHHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAV---QRLRLAFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~---~~~r~~~~~~~iia~~~~--~~~----~~~l~~~Gad~vi~p 531 (663)
++++++...-.+. ..+..+.++ .++.-.++ +.. .+.+++.|+..+-.|
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 149 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPG-SLFLDMASITPREARDHAARLGALGIAHLDTP 149 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EECCCHHHHHHHHcchhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 9999865433333 234445555 45544443 222 234566688665444
No 40
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.84 E-value=0.0024 Score=64.59 Aligned_cols=69 Identities=20% Similarity=0.361 Sum_probs=60.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
...+|+|.|.|.+|+.+++.|. +.|++|+++++++++.+.+.+.+..++.||.+|.+ .+++|+|
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------~~~~d~v 67 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALA----------PQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------LDGVTHL 67 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHG----------GGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------CTTCCEE
T ss_pred CcCcEEEECCcHHHHHHHHHHH----------HCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc------cCCCCEE
Confidence 3467999999999999999997 77999999999999988888888999999999944 6788988
Q ss_pred EEEcC
Q 006034 482 MIMYT 486 (663)
Q Consensus 482 v~~~~ 486 (663)
|-+..
T Consensus 68 i~~a~ 72 (286)
T 3ius_A 68 LISTA 72 (286)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 87764
No 41
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.79 E-value=0.0043 Score=63.81 Aligned_cols=111 Identities=18% Similarity=0.087 Sum_probs=73.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
..+|.|+|.|++|..+++.|. +.|++|++.|+|+++.+.+.+.|......|.. + -++++|.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~--e-----~~~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCL----------RAGLSTWGADLNPQACANLLAEGACGAAASAR--E-----FAGVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCSEEESSST--T-----TTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHHcCCccccCCHH--H-----HHhcCCEEE
Confidence 457999999999999999998 78999999999999999998877655232222 1 246889999
Q ss_pred EEcCCHHHHHHHH---H-HHHHhCCCCcEEEEecC--hhhH----HHHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAV---Q-RLRLAFPAIPIYARAQD--MMHL----LDLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~---~-~~r~~~~~~~iia~~~~--~~~~----~~l~~~Gad~vi~p 531 (663)
++++++...-.+. . ....+.++ .++.-..+ +... +.+++.|+..+-.|
T Consensus 70 ~~vp~~~~~~~v~~~~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 127 (303)
T 3g0o_A 70 ILVVNAAQVRQVLFGEDGVAHLMKPG-SAVMVSSTISSADAQEIAAALTALNLNMLDAP 127 (303)
T ss_dssp ECCSSHHHHHHHHC--CCCGGGSCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred EECCCHHHHHHHHhChhhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 9999864322222 1 12233444 45554432 2222 33455577655444
No 42
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.78 E-value=0.0029 Score=64.69 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=69.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCC------hHHHHH---HHhcCCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN------PSVVKE---SRKLGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d------~~~~~~---~~~~~~~vi~GD~~~~~~L~~a 473 (663)
++|+|.|. |.+|+.+++.|. +.|++|++++++ +++.+. +...+..++.||.+|++.|+++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~ 74 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASL----------DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEA 74 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHH
Confidence 46999997 999999999997 678999999997 344432 3356889999999999998876
Q ss_pred CCCCCcEEEEEcCCH--HHHHHHHHHHHHhC-CCCcEE
Q 006034 474 GITSPKAVMIMYTDK--KRTIEAVQRLRLAF-PAIPIY 508 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd--~~n~~~~~~~r~~~-~~~~ii 508 (663)
++++|+|+.+.+.. .....++..+++.+ .+ +++
T Consensus 75 -~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v 110 (308)
T 1qyc_A 75 -VKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK-RFF 110 (308)
T ss_dssp -HHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS-EEE
T ss_pred -HcCCCEEEECCcchhhhhHHHHHHHHHhcCCCc-eEe
Confidence 45689888877643 22344556677776 44 444
No 43
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.77 E-value=0.0044 Score=63.28 Aligned_cols=93 Identities=18% Similarity=0.250 Sum_probs=69.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh-------HHHHH---HHhcCCCEEEecCCCHHHHHh
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP-------SVVKE---SRKLGFPILYGDASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~-------~~~~~---~~~~~~~vi~GD~~~~~~L~~ 472 (663)
++++|.|. |.+|+.+++.|. +.|++|+++++++ ++.+. +.+.+..++.||.+|++.+++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~ 72 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASI----------KAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVK 72 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHH----------hCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH
Confidence 46999997 999999999997 6789999999987 55443 335688999999999999887
Q ss_pred cCCCCCcEEEEEcCCH--HHHHHHHHHHHHhC-CCCcEE
Q 006034 473 AGITSPKAVMIMYTDK--KRTIEAVQRLRLAF-PAIPIY 508 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd--~~n~~~~~~~r~~~-~~~~ii 508 (663)
+ ++.+|+||.+.+.. .....++..+++.+ .+ +++
T Consensus 73 ~-~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v 109 (307)
T 2gas_A 73 A-IKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVK-KFF 109 (307)
T ss_dssp H-HTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCS-EEE
T ss_pred H-HhCCCEEEECCcccccccHHHHHHHHHhcCCce-EEe
Confidence 5 45789888877642 22334556667765 44 444
No 44
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.77 E-value=0.0033 Score=65.78 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=68.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++|.|+|.|.+|..+++.|. +.|++|.+.|+|++..+.+.+.|.... .+..+.++++ .+++|.|
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~----------~~G~~V~~~dr~~~~~~~a~~~G~~~~---~~~~e~~~~a-~~~aDlV 72 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLH----------AANHSVFGYNRSRSGAKSAVDEGFDVS---ADLEATLQRA-AAEDALI 72 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHHHTTCCEE---SCHHHHHHHH-HHTTCEE
T ss_pred CCCEEEEEeecHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeee---CCHHHHHHhc-ccCCCEE
Confidence 4567999999999999999998 789999999999999998888876431 1224566655 5678999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
+++++.+. ...+...++...|+ .+++-+.
T Consensus 73 ilavP~~~-~~~vl~~l~~~~~~-~iv~Dv~ 101 (341)
T 3ktd_A 73 VLAVPMTA-IDSLLDAVHTHAPN-NGFTDVV 101 (341)
T ss_dssp EECSCHHH-HHHHHHHHHHHCTT-CCEEECC
T ss_pred EEeCCHHH-HHHHHHHHHccCCC-CEEEEcC
Confidence 99999653 33344445555555 4554443
No 45
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.77 E-value=0.0039 Score=61.20 Aligned_cols=71 Identities=24% Similarity=0.225 Sum_probs=59.3
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCC-CEEEecCCCHHHHHhcCCCCCcE
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-PILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~-~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.++++|.|. |.+|+.+++.|. ++|++|+++++++++.+.+.+.+. .++.+|.+ +++.+. ++++|.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~----------~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~--~~~~D~ 87 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELK----------NKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHA--FASIDA 87 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGG--GTTCSE
T ss_pred CCeEEEECCCChHHHHHHHHHH----------hCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHH--HcCCCE
Confidence 357999998 999999999998 789999999999999988888889 99999999 333333 358898
Q ss_pred EEEEcC
Q 006034 481 VMIMYT 486 (663)
Q Consensus 481 vv~~~~ 486 (663)
+|-+.+
T Consensus 88 vi~~ag 93 (236)
T 3e8x_A 88 VVFAAG 93 (236)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 887765
No 46
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.74 E-value=0.0018 Score=63.91 Aligned_cols=74 Identities=23% Similarity=0.276 Sum_probs=61.5
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.++++|.| .|.+|+.+++.|. +.| ++|+++++++++.+.....+..++.+|.+|++.++++ ++++|.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~----------~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~ 91 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLA----------DKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQA-MQGQDI 91 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHT----------TCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHH-HTTCSE
T ss_pred ccEEEEEeCCcHHHHHHHHHHH----------hCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHH-hcCCCE
Confidence 45799999 5999999999997 778 8999999999887655556788999999999988875 457898
Q ss_pred EEEEcCC
Q 006034 481 VMIMYTD 487 (663)
Q Consensus 481 vv~~~~d 487 (663)
+|.+...
T Consensus 92 vv~~a~~ 98 (236)
T 3qvo_A 92 VYANLTG 98 (236)
T ss_dssp EEEECCS
T ss_pred EEEcCCC
Confidence 8866654
No 47
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.74 E-value=0.0094 Score=61.03 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=71.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+.+|.|+|.|.+|..+++.|. +.|++|++.|+|+++.+.+.+.+..+ .++.+-+ ++ +|.|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~-aDvvi 75 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMT----------EWPGGVTVYDIRIEAMTPLAEAGATL----ADSVADV----AA-ADLIH 75 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHT----------TSTTCEEEECSSTTTSHHHHHTTCEE----CSSHHHH----TT-SSEEE
T ss_pred CCeEEEECcCHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCEE----cCCHHHH----Hh-CCEEE
Confidence 357999999999999999997 78999999999999999998876543 2333322 34 89999
Q ss_pred EEcCCHHHHHHHHHHHHH-hCCCCcEEEEecC--hhh----HHHHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAVQRLRL-AFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~--~~~----~~~l~~~Gad~vi~p 531 (663)
++++++..--.+...+.+ +.++ .++.-..+ +.. .+.+++.|+..+-.|
T Consensus 76 ~~vp~~~~~~~v~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 130 (296)
T 3qha_A 76 ITVLDDAQVREVVGELAGHAKPG-TVIAIHSTISDTTAVELARDLKARDIHIVDAP 130 (296)
T ss_dssp ECCSSHHHHHHHHHHHHTTCCTT-CEEEECSCCCHHHHHHHHHHHGGGTCEEEECC
T ss_pred EECCChHHHHHHHHHHHHhcCCC-CEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 999986443323333332 3444 45544443 222 233445577655333
No 48
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.73 E-value=0.0083 Score=61.77 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=71.8
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HHHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~~L~~a~i~~a~~ 480 (663)
...+|.|+|.|++|..+++.|. +.|++|++.|+|+++.+.+.+.|... .++ .+.++ ++|.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~e~~~-----~aDv 68 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLL----------KQGKRVAIWNRSPGKAAALVAAGAHL----CESVKAALS-----ASPA 68 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTCEE----CSSHHHHHH-----HSSE
T ss_pred CCCeEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHHHh-----cCCE
Confidence 3457999999999999999998 78999999999999999988776532 233 33443 5799
Q ss_pred EEEEcCCHHHHHHHHH--HHHHhCCCCcEEEEecC--hh----hHHHHHHcCCCeE
Q 006034 481 VMIMYTDKKRTIEAVQ--RLRLAFPAIPIYARAQD--MM----HLLDLKKAGATDA 528 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~--~~r~~~~~~~iia~~~~--~~----~~~~l~~~Gad~v 528 (663)
|+++++++...-.+.. .+....++ .++.-.++ +. -.+.+++.|+..+
T Consensus 69 Vi~~vp~~~~~~~v~~~~~l~~~~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~v 123 (306)
T 3l6d_A 69 TIFVLLDNHATHEVLGMPGVARALAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYV 123 (306)
T ss_dssp EEECCSSHHHHHHHHTSTTHHHHTTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCHHHHHHHhcccchhhccCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999998753222222 23445555 45544432 22 2234566677654
No 49
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.73 E-value=0.0049 Score=63.45 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=69.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh------HHHHH---HHhcCCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP------SVVKE---SRKLGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~------~~~~~---~~~~~~~vi~GD~~~~~~L~~a 473 (663)
++++|.|. |.+|+.+++.|. +.|++|+++++++ ++.+. +...+..++.||.+|++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a 74 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASL----------SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSV 74 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHH----------HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred cEEEEEcCCchhHHHHHHHHH----------hCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHH
Confidence 46999996 999999999998 6789999999986 34333 3456899999999999999876
Q ss_pred CCCCCcEEEEEcCCH--HHHHHHHHHHHHhC-CCCcEE
Q 006034 474 GITSPKAVMIMYTDK--KRTIEAVQRLRLAF-PAIPIY 508 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd--~~n~~~~~~~r~~~-~~~~ii 508 (663)
++.+|+|+.+.+.. .....++..+++.+ .+ ++|
T Consensus 75 -~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~-~~v 110 (321)
T 3c1o_A 75 -LKQVDIVISALPFPMISSQIHIINAIKAAGNIK-RFL 110 (321)
T ss_dssp -HTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCC-EEE
T ss_pred -HcCCCEEEECCCccchhhHHHHHHHHHHhCCcc-EEe
Confidence 45689888776642 23344556667765 44 444
No 50
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.69 E-value=0.0016 Score=63.17 Aligned_cols=83 Identities=13% Similarity=0.126 Sum_probs=66.7
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++|.|. |.+|+.+++.|. ++|++|+++++++++.+.+.+.+..++.||.+|++. + -++++|.||.
T Consensus 2 kilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~--~~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR----------RRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-A--DLDSVDAVVD 68 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-H--HHTTCSEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHH----------HCCCEEEEEEecccccccccCCCceEEecccccccH-h--hcccCCEEEE
Confidence 4899998 999999999998 789999999999999887777789999999999877 3 3457898887
Q ss_pred EcCC------HHHHHHHHHHHHH
Q 006034 484 MYTD------KKRTIEAVQRLRL 500 (663)
Q Consensus 484 ~~~d------d~~n~~~~~~~r~ 500 (663)
+.+. .+.|+..+..+-+
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~ 91 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVS 91 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHH
T ss_pred CCccCCCcchhhHHHHHHHHHHH
Confidence 7643 3556666555444
No 51
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.67 E-value=0.0059 Score=62.68 Aligned_cols=112 Identities=18% Similarity=0.208 Sum_probs=73.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++|-++|.|++|..+|+.|. +.|++|++.|+++++++.+.+.|..+. .++ ++ =++++|.+
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~----------~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~---~e-~~~~~dvv 65 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILL----------EAGYELVVWNRTASKAEPLTKLGATVV----ENA---ID-AITPGGIV 65 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH----------HTTCEEEEC-------CTTTTTTCEEC----SSG---GG-GCCTTCEE
T ss_pred CCCcEEEEecHHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCeEe----CCH---HH-HHhcCCce
Confidence 4567999999999999999998 799999999999999998887775542 222 22 14688999
Q ss_pred EEEcCCHHHHHH--HHHHHHHhCCCCcEEEEecC--h----hhHHHHHHcCCCeEEcCc
Q 006034 482 MIMYTDKKRTIE--AVQRLRLAFPAIPIYARAQD--M----MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 482 v~~~~dd~~n~~--~~~~~r~~~~~~~iia~~~~--~----~~~~~l~~~Gad~vi~p~ 532 (663)
+++..+++.... ....+..+.++ .++.-.++ + +..+.+++.|+..+=.|-
T Consensus 66 i~~l~~~~~~~~v~~~~~~~~~~~~-~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 66 FSVLADDAAVEELFSMELVEKLGKD-GVHVSMSTISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp EECCSSHHHHHHHSCHHHHHHHCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred eeeccchhhHHHHHHHHHHhhcCCC-eEEEECCCCChHHHHHHHHHHHhcCCceecCCc
Confidence 999998754332 22345566665 55554443 3 344566788998887775
No 52
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.65 E-value=0.0042 Score=64.90 Aligned_cols=88 Identities=19% Similarity=0.174 Sum_probs=69.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh----HHHH---HHHhcCCCEEEecCCCHHHHHhcCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----SVVK---ESRKLGFPILYGDASRPAVLLSAGI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~----~~~~---~~~~~~~~vi~GD~~~~~~L~~a~i 475 (663)
.+|+|.|. |.+|+.+++.|. +.|++|.++++++ ++.+ .+.+.+..++.||.+|++.++++ +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~ 79 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASL----------DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKI-L 79 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHH----------HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-H
T ss_pred CeEEEECCCcHHHHHHHHHHH----------HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHH-H
Confidence 57999998 999999999997 6789999999977 4443 34457899999999999988765 3
Q ss_pred C--CCcEEEEEcCC--HHHHHHHHHHHHHhC
Q 006034 476 T--SPKAVMIMYTD--KKRTIEAVQRLRLAF 502 (663)
Q Consensus 476 ~--~a~~vv~~~~d--d~~n~~~~~~~r~~~ 502 (663)
+ ++|+||.+... -..+..++..+++.+
T Consensus 80 ~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 80 KEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp HHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred hhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 4 78988887764 233455667777776
No 53
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.65 E-value=0.0028 Score=61.48 Aligned_cols=86 Identities=19% Similarity=0.172 Sum_probs=65.9
Q ss_pred cEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HHHHHhcCCCCCcEEE
Q 006034 405 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~~L~~a~i~~a~~vv 482 (663)
+++|.| .|.+|+.+++.|. +.|++|+++++++++.+.. .+..++.||.+| ++.++++ +++.|.||
T Consensus 2 ~ilItGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~-~~~~d~vi 68 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS----------TTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQ-LHGMDAII 68 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT----------TSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTT-TTTCSEEE
T ss_pred eEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHH-HcCCCEEE
Confidence 588998 6999999999997 7899999999999875433 468899999999 9888765 56899888
Q ss_pred EEcCCH---------HHHHHHHHHHHHhCC
Q 006034 483 IMYTDK---------KRTIEAVQRLRLAFP 503 (663)
Q Consensus 483 ~~~~dd---------~~n~~~~~~~r~~~~ 503 (663)
-+.... .....++..+++.+.
T Consensus 69 ~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 69 NVSGSGGKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp ECCCCTTSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred ECCcCCCCCcEeEeHHHHHHHHHHHHHhCC
Confidence 777532 123344555666553
No 54
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.59 E-value=0.0042 Score=60.31 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=67.3
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-HHHHH--HhcCCCEEEecCCCHHHHHhcCCCCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKES--RKLGFPILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~~~--~~~~~~vi~GD~~~~~~L~~a~i~~a 478 (663)
.++++|.|. |.+|+.+++.|.+ ++|++|++++++++ +.+.+ ...+..++.+|.+|++.++++ ++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~---------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~ 74 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLT---------YTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQA-VTNA 74 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHH---------HCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHH-HTTC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHh---------cCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHH-HcCC
Confidence 356999995 9999999999962 58999999999999 87776 345678899999999988775 3578
Q ss_pred cEEEEEcCCH-HHHHHHHHHHHHhC
Q 006034 479 KAVMIMYTDK-KRTIEAVQRLRLAF 502 (663)
Q Consensus 479 ~~vv~~~~dd-~~n~~~~~~~r~~~ 502 (663)
|.+|.+.+.. .....+...+++.+
T Consensus 75 d~vv~~ag~~n~~~~~~~~~~~~~~ 99 (221)
T 3r6d_A 75 EVVFVGAMESGSDMASIVKALSRXN 99 (221)
T ss_dssp SEEEESCCCCHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCCCChhHHHHHHHHHhcC
Confidence 9888777652 11233334445544
No 55
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.58 E-value=0.011 Score=60.48 Aligned_cols=109 Identities=17% Similarity=0.205 Sum_probs=71.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
.+|.|+|.|++|..+++.|. +.|++|++.|+|+++.+.+.+.+... .++.+-+ ++++|.|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~~----~~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLL----------KAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHCCCeE----cCCHHHH----HhCCCeEEE
Confidence 47999999999999999998 78999999999999999998876442 2233222 357899999
Q ss_pred EcCCHHHHHHHHH----HHHHhCCCCcEEEEecC--hhh----HHHHHHcCCCeEEcC
Q 006034 484 MYTDKKRTIEAVQ----RLRLAFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 531 (663)
Q Consensus 484 ~~~dd~~n~~~~~----~~r~~~~~~~iia~~~~--~~~----~~~l~~~Gad~vi~p 531 (663)
+++++..--.+.. ....+.++ .++.-.++ +.. .+.+.+.|+..+-.|
T Consensus 66 ~vp~~~~~~~v~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~p 122 (302)
T 2h78_A 66 MLPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (302)
T ss_dssp CCSCHHHHHHHHHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred ECCCHHHHHHHHcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 9987653222222 22234444 45544332 222 334556687765444
No 56
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.56 E-value=0.0084 Score=60.58 Aligned_cols=87 Identities=16% Similarity=0.188 Sum_probs=60.9
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCE-EEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPI-LYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~v-i~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
++.|+|+|++|..+++.|. +.|++|+++|+++++.+.+.+.+... .. +| ++++ +++|.|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~--~~~D~vi~ 63 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLR----------RRGHYLIGVSRQQSTCEKAVERQLVDEAG---QD---LSLL--QTAKIIFL 63 (279)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTSCSEEE---SC---GGGG--TTCSEEEE
T ss_pred EEEEEcCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHhCCCCcccc---CC---HHHh--CCCCEEEE
Confidence 5889999999999999997 67889999999999998887766531 11 22 3444 68999999
Q ss_pred EcCCHHHHHHHHHHHHH-hCCCCcEEEEe
Q 006034 484 MYTDKKRTIEAVQRLRL-AFPAIPIYARA 511 (663)
Q Consensus 484 ~~~dd~~n~~~~~~~r~-~~~~~~iia~~ 511 (663)
++..+.. ..++..++. +.++ .++.-+
T Consensus 64 av~~~~~-~~~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 64 CTPIQLI-LPTLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp CSCHHHH-HHHHHHHGGGSCTT-CEEEEC
T ss_pred ECCHHHH-HHHHHHHHhhCCCC-CEEEEC
Confidence 9986532 223333333 3445 455545
No 57
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.56 E-value=0.011 Score=60.12 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=72.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
.+|.|+|.|++|..+++.|. +.|++|++.|+|+++.+.+.+.+.... .+.++.+ +++|.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~~~~~~-----~~aDvvi~ 63 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLV----------KAGCSVTIWNRSPEKAEELAALGAERA---ATPCEVV-----ESCPVTFA 63 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSGGGGHHHHHTTCEEC---SSHHHHH-----HHCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHH----------HCCCeEEEEcCCHHHHHHHHHCCCeec---CCHHHHH-----hcCCEEEE
Confidence 36899999999999999998 789999999999999999988765331 1222333 35799999
Q ss_pred EcCCHHHHHHHH---H-HHHHhCCCCcEEEEecC--hhh----HHHHHHcCCCeEEcC
Q 006034 484 MYTDKKRTIEAV---Q-RLRLAFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 531 (663)
Q Consensus 484 ~~~dd~~n~~~~---~-~~r~~~~~~~iia~~~~--~~~----~~~l~~~Gad~vi~p 531 (663)
+++++...-... . ..+.+.++ .++.-..+ +.. .+.+++.|+..+-.|
T Consensus 64 ~vp~~~~~~~v~~~~~~l~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pef_A 64 MLADPAAAEEVCFGKHGVLEGIGEG-RGYVDMSTVDPATSQRIGVAVVAKGGRFLEAP 120 (287)
T ss_dssp CCSSHHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EcCCHHHHHHHHcCcchHhhcCCCC-CEEEeCCCCCHHHHHHHHHHHHHhCCEEEECC
Confidence 999764433333 2 23344555 45544443 222 234556677655444
No 58
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.54 E-value=0.0045 Score=66.45 Aligned_cols=116 Identities=15% Similarity=0.085 Sum_probs=83.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCC---CCEEEEeCChHHHHHHHhc-------CCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG---WPFVAFDLNPSVVKESRKL-------GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~---~~vvvid~d~~~~~~~~~~-------~~~vi~GD~~~~~~L~~a 473 (663)
++++|+|.|.+|+.+++.|. +.+ .+|++.|+|+++.+.+.+. ....+..|.+|++.++++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~----------~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~ 71 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA----------MNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL 71 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------TCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH
Confidence 36899999999999999997 455 3899999999998876642 477889999998877664
Q ss_pred CCC--CCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE--ecCh-----------hhHHHHHHcCCCeEEcCch
Q 006034 474 GIT--SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR--AQDM-----------MHLLDLKKAGATDAILENA 533 (663)
Q Consensus 474 ~i~--~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~--~~~~-----------~~~~~l~~~Gad~vi~p~~ 533 (663)
++ ++|.||.+++... +..++..+.+.+.+ ++-. ...+ +..+..++.|+..+..+..
T Consensus 72 -l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~--vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 72 -INEVKPQIVLNIALPYQ-DLTIMEACLRTGVP--YLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp -HHHHCCSEEEECSCGGG-HHHHHHHHHHHTCC--EEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBT
T ss_pred -HHhhCCCEEEECCCccc-ChHHHHHHHHhCCC--EEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCC
Confidence 22 4898888877543 44555666666543 4422 1121 5677788899977766643
No 59
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.52 E-value=0.001 Score=69.19 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=63.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeC--ChHHHHHHHhcCCCEEEe------cCCCHHHHHhcCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL--NPSVVKESRKLGFPILYG------DASRPAVLLSAGIT 476 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~--d~~~~~~~~~~~~~vi~G------D~~~~~~L~~a~i~ 476 (663)
+|.|+|.|.+|..++..|. +.|++|.++|+ ++++.+.+.+.+....+| +.++++.++++ ++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 70 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLV----------DNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC-LE 70 (335)
T ss_dssp EEEEESCCHHHHHHHHHHH----------HHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH-HT
T ss_pred EEEEECcCHHHHHHHHHHH----------hCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH-Hh
Confidence 5889999999999999997 67899999999 999999888765311111 12222223222 46
Q ss_pred CCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 477 SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 477 ~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
++|.+++++.++...-.+..... +.++..++...|
T Consensus 71 ~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~n 105 (335)
T 1txg_A 71 NAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLISK 105 (335)
T ss_dssp TCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECCC
T ss_pred cCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcC
Confidence 89999999988744333323333 555533444443
No 60
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.51 E-value=0.0021 Score=67.81 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=73.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++++|+|+|++|+.+++.|. +.|.+|++.|.|+++++.+.+. +...+ ..++.+. .++|.+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~----------~~GakVvv~D~~~~~l~~~a~~~ga~~v----~~~~ll~----~~~DIv 234 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLN----------TEGAKLVVTDVNKAAVSAAVAEEGADAV----APNAIYG----VTCDIF 234 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCCEEC----CGGGTTT----CCCSEE
T ss_pred cCEEEEECchHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHcCCEEE----ChHHHhc----cCCcEe
Confidence 457999999999999999998 7899999999999998877653 43222 1123332 488987
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEE-EecCh----hhHHHHHHcCCCeEEcCch
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYA-RAQDM----MHLLDLKKAGATDAILENA 533 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia-~~~~~----~~~~~l~~~Gad~vi~p~~ 533 (663)
+.+...+..|.. .++.++ .++|+ .+|.+ +..+.|++.|+ ++.|..
T Consensus 235 ip~a~~~~I~~~---~~~~lg--~~iV~e~An~p~t~~ea~~~L~~~Gi--~~~Pd~ 284 (364)
T 1leh_A 235 APCALGAVLNDF---TIPQLK--AKVIAGSADNQLKDPRHGKYLHELGI--VYAPDY 284 (364)
T ss_dssp EECSCSCCBSTT---HHHHCC--CSEECCSCSCCBSSHHHHHHHHHHTC--EECCHH
T ss_pred eccchHHHhCHH---HHHhCC--CcEEEeCCCCCcccHHHHHHHHhCCC--EEecce
Confidence 766544333322 455664 34554 55553 66788999998 677764
No 61
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.50 E-value=0.013 Score=59.94 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=69.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~vv 482 (663)
.+|.|+|+|++|..+++.|. +.|++|.+.|+++++.+.+.+.+..+ .++. +.+ +++|.|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~D~vi 65 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLL----------KEGVTVYAFDLMEANVAAVVAQGAQA----CENNQKVA-----AASDIIF 65 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHTTTCEE----CSSHHHHH-----HHCSEEE
T ss_pred CEEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCee----cCCHHHHH-----hCCCEEE
Confidence 47999999999999999997 67899999999999999888766432 2233 333 3589999
Q ss_pred EEcCCHHHHHHHH----HHHHHhCCCCcEEEEecCh-hhH----HHHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAV----QRLRLAFPAIPIYARAQDM-MHL----LDLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~----~~~r~~~~~~~iia~~~~~-~~~----~~l~~~Gad~vi~p 531 (663)
++++++...-.+. .....+.++..++...+-. ... +.+.+.|+..+-.|
T Consensus 66 ~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p 123 (301)
T 3cky_A 66 TSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAP 123 (301)
T ss_dssp ECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEcc
Confidence 9997765433333 2233455563344433332 222 23344566544334
No 62
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.49 E-value=0.002 Score=62.33 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=58.2
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+|+|.|. |.+|+.+++.|. ++|++|+++++++++.+.+. .+..++.+|.+|++. + -++++|.+|-
T Consensus 2 kvlVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~--~~~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAK----------NRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-S--DLSDQNVVVD 67 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-H--HHTTCSEEEE
T ss_pred eEEEEcCCchhHHHHHHHHH----------hCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-h--hhcCCCEEEE
Confidence 5899995 999999999998 78999999999999887766 689999999999877 3 3467898887
Q ss_pred EcCC
Q 006034 484 MYTD 487 (663)
Q Consensus 484 ~~~d 487 (663)
+.+.
T Consensus 68 ~ag~ 71 (221)
T 3ew7_A 68 AYGI 71 (221)
T ss_dssp CCCS
T ss_pred CCcC
Confidence 7654
No 63
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.48 E-value=0.0033 Score=62.86 Aligned_cols=88 Identities=18% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCCh-------------------HHHHHHHh------cC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVVKESRK------LG 456 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~-------------------~~~~~~~~------~~ 456 (663)
..+|+|+|.|.+|..+++.|. ..|. +++++|.|. .+++.+.+ .+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La----------~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 100 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLA----------SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH 100 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CCeEEEEeeCHHHHHHHHHHH----------HcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence 468999999999999999997 6776 899999998 66655532 12
Q ss_pred CC--EEEecCCCHHHHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhC
Q 006034 457 FP--ILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAF 502 (663)
Q Consensus 457 ~~--vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~ 502 (663)
.. .+..+.++ +.+++. ++++|.||.++++.+.+..+...+++.+
T Consensus 101 ~~v~~~~~~~~~-~~~~~~-~~~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 101 IAITPVNALLDD-AELAAL-IAEHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp SEEEEECSCCCH-HHHHHH-HHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred cEEEEEeccCCH-hHHHHH-HhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 22 33444443 333332 5689999999999898889999999886
No 64
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.48 E-value=0.0098 Score=61.34 Aligned_cols=110 Identities=17% Similarity=0.142 Sum_probs=72.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
..+|.|+|.|.+|..+++.|. +.|++|++.|+|+++.+.+.+.+..+ -.+..+.+ +++|.|+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~l~~~g~~~---~~~~~~~~-----~~aDvvi 82 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLL----------KNGFKVTVWNRTLSKCDELVEHGASV---CESPAEVI-----KKCKYTI 82 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSGGGGHHHHHTTCEE---CSSHHHHH-----HHCSEEE
T ss_pred CCEEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCeE---cCCHHHHH-----HhCCEEE
Confidence 357999999999999999998 78999999999999999988876533 11223333 3579999
Q ss_pred EEcCCHHHHHHHH---HH-HHHhCCCCcEEEEecC--hh----hHHHHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAV---QR-LRLAFPAIPIYARAQD--MM----HLLDLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~---~~-~r~~~~~~~iia~~~~--~~----~~~~l~~~Gad~vi~p 531 (663)
++++++...-.+. .. +..+.++ .++.-..+ +. -.+.+.+.|+..+-.|
T Consensus 83 ~~vp~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p 140 (310)
T 3doj_A 83 AMLSDPCAALSVVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFVEGP 140 (310)
T ss_dssp ECCSSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEcCCHHHHHHHHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 9998764322222 11 2233444 45554443 22 2234566687655444
No 65
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.43 E-value=0.011 Score=60.50 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=74.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++.|+|+|++|+.+++.|. ..|.+|.+.|+++++.+.+.+.+..++. . +.+++ -++++|.++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~~--~---~~l~~-~l~~aDvVi 218 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFA----------ALGAKVKVGARESDLLARIAEMGMEPFH--I---SKAAQ-ELRDVDVCI 218 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTTSEEEE--G---GGHHH-HTTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHCCCeecC--h---hhHHH-HhcCCCEEE
Confidence 457999999999999999997 7889999999999887777666655431 1 22332 246899999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEecCh--hhHHHHHHcCCCeEEcCch
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDM--MHLLDLKKAGATDAILENA 533 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~--~~~~~l~~~Gad~vi~p~~ 533 (663)
.+++....|- ...+.+.|+..++-.+..+ ...+..++.|+..+..|..
T Consensus 219 ~~~p~~~i~~---~~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 219 NTIPALVVTA---NVLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKALLVPGL 268 (293)
T ss_dssp ECCSSCCBCH---HHHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCH
T ss_pred ECCChHHhCH---HHHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEEECCCC
Confidence 9887632222 2344556664444433322 2236667789876655553
No 66
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.42 E-value=0.011 Score=60.85 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=77.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
++|-++|.|++|..+++.|. +.|++|++.|+++++++.+.+.|..+ +.+++-+ ++++|.++.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~----------~~G~~v~v~dr~~~~~~~l~~~Ga~~----a~s~~e~----~~~~dvv~~ 65 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLL----------KAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVIS 65 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEE
T ss_pred CEEEEeeehHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHcCCEE----cCCHHHH----HhcCCceee
Confidence 36899999999999999998 78999999999999999999887544 2333322 368899999
Q ss_pred EcCCHHHHHHHHHH----HHHhCCCCcEEEEecC--h----hhHHHHHHcCCCeEEcC
Q 006034 484 MYTDKKRTIEAVQR----LRLAFPAIPIYARAQD--M----MHLLDLKKAGATDAILE 531 (663)
Q Consensus 484 ~~~dd~~n~~~~~~----~r~~~~~~~iia~~~~--~----~~~~~l~~~Gad~vi~p 531 (663)
+..|++.--.+..- +..+.|. .++.-..+ + +..+.+++.|++.+=.|
T Consensus 66 ~l~~~~~v~~V~~~~~g~~~~~~~g-~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 66 MLPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp CCSCHHHHHHHHHSSSSSTTSCCC--CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred cCCchHHHHHHHhchhhhhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 99987654333321 2223333 45554443 3 44556677899887666
No 67
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.40 E-value=0.0026 Score=61.98 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=59.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++|.|. |.+|+.+++.|. +.|++|+++++++++.+.+. .+..++.+|.+|++.++++ ++++|.||
T Consensus 5 ~~ilItGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 72 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL----------NRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEV-CKGADAVI 72 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH----------TTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHH-HTTCSEEE
T ss_pred CEEEEEcCCchHHHHHHHHHH----------HCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHH-hcCCCEEE
Confidence 47999995 999999999998 78999999999988754332 4678899999999988875 45789888
Q ss_pred EEcCC
Q 006034 483 IMYTD 487 (663)
Q Consensus 483 ~~~~d 487 (663)
-+.+.
T Consensus 73 ~~a~~ 77 (227)
T 3dhn_A 73 SAFNP 77 (227)
T ss_dssp ECCCC
T ss_pred EeCcC
Confidence 77654
No 68
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.40 E-value=0.011 Score=59.83 Aligned_cols=66 Identities=12% Similarity=0.185 Sum_probs=53.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 484 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~ 484 (663)
+|.|+|+|++|..+++.|. + |++|.+.|+++++.+.+.+.|..+. + .++. ++++|.|+++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~----------~-g~~V~~~~~~~~~~~~~~~~g~~~~--~--~~~~-----~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA----------R-RFPTLVWNRTFEKALRHQEEFGSEA--V--PLER-----VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH----------T-TSCEEEECSSTHHHHHHHHHHCCEE--C--CGGG-----GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHh----------C-CCeEEEEeCCHHHHHHHHHCCCccc--C--HHHH-----HhCCCEEEEe
Confidence 5899999999999999998 7 9999999999999988877665442 1 2222 3578999999
Q ss_pred cCCHHH
Q 006034 485 YTDKKR 490 (663)
Q Consensus 485 ~~dd~~ 490 (663)
+.++..
T Consensus 63 v~~~~~ 68 (289)
T 2cvz_A 63 LPTTRE 68 (289)
T ss_dssp CSSHHH
T ss_pred CCChHH
Confidence 998753
No 69
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.29 E-value=0.0095 Score=62.56 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=65.8
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH--HHHHh-cCCCEEEec-CCCHHHHHhcCCCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV--KESRK-LGFPILYGD-ASRPAVLLSAGITS 477 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~--~~~~~-~~~~vi~GD-~~~~~~L~~a~i~~ 477 (663)
.++++|.|. |.+|+.+++.|. +.|++|++++++++.. +.+.+ .+..++.|| .+|++.++++ ++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~-~~~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAA----------AVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL-FEG 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH-HTT
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------hCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHH-Hhc
Confidence 357999996 999999999997 6789999999988764 44443 367889999 9999998876 567
Q ss_pred CcEEEEEcCCH--HHH---HHHHHHHHHhC
Q 006034 478 PKAVMIMYTDK--KRT---IEAVQRLRLAF 502 (663)
Q Consensus 478 a~~vv~~~~dd--~~n---~~~~~~~r~~~ 502 (663)
+|.|+...... ..| ..++..+++.+
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcC
Confidence 89888655431 223 33445566665
No 70
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.28 E-value=0.013 Score=59.68 Aligned_cols=108 Identities=18% Similarity=0.132 Sum_probs=69.9
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 484 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~ 484 (663)
+|.|+|.|++|..+++.|. +.|++|.+.|+|+++.+.+.+.+..+. .+..+.+ +++|.++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~~~~~~-----~~advvi~~ 64 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLV----------RAGFDVTVWNRNPAKCAPLVALGARQA---SSPAEVC-----AACDITIAM 64 (287)
T ss_dssp CEEEECCSTTHHHHHHHHH----------HHTCCEEEECSSGGGGHHHHHHTCEEC---SCHHHHH-----HHCSEEEEC
T ss_pred eEEEEccCHHHHHHHHHHH----------HCCCeEEEEcCCHHHHHHHHHCCCeec---CCHHHHH-----HcCCEEEEE
Confidence 6899999999999999997 679999999999999998887765431 1222333 357999999
Q ss_pred cCCHHHHHHHH---HH-HHHhCCCCcEEEEecC--hhh----HHHHHHcCCCeEEcC
Q 006034 485 YTDKKRTIEAV---QR-LRLAFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 531 (663)
Q Consensus 485 ~~dd~~n~~~~---~~-~r~~~~~~~iia~~~~--~~~----~~~l~~~Gad~vi~p 531 (663)
++++...-... .. ...+.++ .++.-..+ +.. .+.+.+.|+..+-.|
T Consensus 65 v~~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pdu_A 65 LADPAAAREVCFGANGVLEGIGGG-RGYIDMSTVDDETSTAIGAAVTARGGRFLEAP 120 (287)
T ss_dssp CSSHHHHHHHHHSTTCGGGTCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHcCchhhhhcccCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 99864322222 11 1223344 45554443 222 234456677654433
No 71
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.27 E-value=0.018 Score=58.63 Aligned_cols=68 Identities=24% Similarity=0.389 Sum_probs=53.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~vv 482 (663)
-+|.|+|.|.+|..+++.|. +.|++|.+.|+++++.+.+.+.+... .++. +.+ +++|.|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~D~vi 66 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLL----------KAGYSLVVSDRNPEAIADVIAAGAET----ASTAKAIA-----EQCDVII 66 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEE----CSSHHHHH-----HHCSEEE
T ss_pred ceEEEECchHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHHH-----hCCCEEE
Confidence 36999999999999999997 67899999999999999888776432 2333 333 3589999
Q ss_pred EEcCCHHH
Q 006034 483 IMYTDKKR 490 (663)
Q Consensus 483 ~~~~dd~~ 490 (663)
++++++..
T Consensus 67 ~~v~~~~~ 74 (299)
T 1vpd_A 67 TMLPNSPH 74 (299)
T ss_dssp ECCSSHHH
T ss_pred EECCCHHH
Confidence 99987643
No 72
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.25 E-value=0.013 Score=60.61 Aligned_cols=93 Identities=23% Similarity=0.243 Sum_probs=64.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHHhcCCC-EEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFP-ILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~~~~~~-vi~GD~~~~~~L~~a~i~~a~ 479 (663)
..+|.|+|.|.+|..+++.|. +.|+ +|++.|+|+++.+.+.+.|.. ... +|.+ +.-++++|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~----------~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~---~~~~---~~~~~~aD 96 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLR----------RSGFKGKIYGYDINPESISKAVDLGIIDEGT---TSIA---KVEDFSPD 96 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHTTSCSEEE---SCTT---GGGGGCCS
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCCCEEEEEECCHHHHHHHHHCCCcchhc---CCHH---HHhhccCC
Confidence 368999999999999999997 6788 899999999999988877653 122 1211 10246899
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
.|+++++.+...-.+......+.++ .+++-+.
T Consensus 97 vVilavp~~~~~~vl~~l~~~l~~~-~iv~d~~ 128 (314)
T 3ggo_A 97 FVMLSSPVRTFREIAKKLSYILSED-ATVTDQG 128 (314)
T ss_dssp EEEECSCGGGHHHHHHHHHHHSCTT-CEEEECC
T ss_pred EEEEeCCHHHHHHHHHHHhhccCCC-cEEEECC
Confidence 9999998865332222333345555 5555444
No 73
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.25 E-value=0.0075 Score=60.52 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=61.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCC-EEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~-vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+|.|+|.|++|..+++.|. +.|++ |.+.|+++++.+.+.+. +..+ .. +. ++ -++++|.|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~----------~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~---~~---~~-~~~~~Dvv 72 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALY----------RKGFRIVQVYSRTEESARELAQKVEAEY-TT---DL---AE-VNPYAKLY 72 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSHHHHHHHHHHTTCEE-ES---CG---GG-SCSCCSEE
T ss_pred CeEEEEcCCHHHHHHHHHHH----------HCCCeEEEEEeCCHHHHHHHHHHcCCce-eC---CH---HH-HhcCCCEE
Confidence 36999999999999999997 56888 89999999999888764 5433 22 22 22 24689999
Q ss_pred EEEcCCHHHHHHHHHHHHHh-CCCCcEEEEec
Q 006034 482 MIMYTDKKRTIEAVQRLRLA-FPAIPIYARAQ 512 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~-~~~~~iia~~~ 512 (663)
++++.++.. ..+...+++. .++ .+++-..
T Consensus 73 i~av~~~~~-~~v~~~l~~~~~~~-~ivv~~s 102 (266)
T 3d1l_A 73 IVSLKDSAF-AELLQGIVEGKREE-ALMVHTA 102 (266)
T ss_dssp EECCCHHHH-HHHHHHHHTTCCTT-CEEEECC
T ss_pred EEecCHHHH-HHHHHHHHhhcCCC-cEEEECC
Confidence 999998743 3333333332 244 4555443
No 74
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.23 E-value=0.012 Score=60.69 Aligned_cols=131 Identities=16% Similarity=0.145 Sum_probs=77.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHH--HHH-hcCCC-----EEEecCCCHHHHHhc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK--ESR-KLGFP-----ILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~--~~~-~~~~~-----vi~GD~~~~~~L~~a 473 (663)
.+|.|+|.|.+|..++..|. ..|+ +|+++|.|+++.+ ... +++.. -+... +|.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~----------~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~----- 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAA----------QRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-DDPE----- 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-SCGG-----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC-CCHH-----
Confidence 47999999999999999997 6677 9999999998765 221 22221 12211 2322
Q ss_pred CCCCCcEEEEEcCCH-----------HHHH----HHHHHHHHhCCCCcEEEEecChh-hHHHH-H---HcCCCeEEcC-c
Q 006034 474 GITSPKAVMIMYTDK-----------KRTI----EAVQRLRLAFPAIPIYARAQDMM-HLLDL-K---KAGATDAILE-N 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd-----------~~n~----~~~~~~r~~~~~~~iia~~~~~~-~~~~l-~---~~Gad~vi~p-~ 532 (663)
.++++|.+++++... ..|. .++..+++..|+..++. +.|+- ....+ + ..+.++|+.. .
T Consensus 72 ~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~-~~Np~~~~~~~~~~~~~~~~~~vig~~~ 150 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML-ITNPVDIATHVAQKLTGLPENQIFGSGT 150 (319)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE-CCSSHHHHHHHHHHHHTCCTTSEEECTT
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecCchHHHHHHHHHhcCCCHHHEeeccc
Confidence 356899999988321 1233 34445555677744444 55553 33333 2 3455788865 4
Q ss_pred hHHHHHHHHHHHHhcCCCH
Q 006034 533 AETSLQLGSKLLKGFGVMS 551 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~ 551 (663)
...+.++...+...+++++
T Consensus 151 ~l~~~r~~~~~a~~~~v~~ 169 (319)
T 1lld_A 151 NLDSARLRFLIAQQTGVNV 169 (319)
T ss_dssp HHHHHHHHHHHHHHHTCCG
T ss_pred cHhHHHHHHHHHHHhCCCH
Confidence 4444444444444444444
No 75
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.18 E-value=0.0046 Score=65.65 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=76.6
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCC-CEEEecCCCHHHHHhcC----C
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-PILYGDASRPAVLLSAG----I 475 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~-~vi~GD~~~~~~L~~a~----i 475 (663)
..+.+++|+|.|.+++.+++.+. ..|++|+++|..++.....+-.+. .++..++ .+.+.+.. +
T Consensus 202 ~P~~rL~IfGAGhva~ala~~a~----------~lg~~V~v~D~R~~~~~~~~fp~a~~~~~~~p--~~~~~~~~~~~~~ 269 (386)
T 2we8_A 202 APRPRMLVFGAIDFAAAVAQQGA----------FLGYRVTVCDARPVFATTARFPTADEVVVDWP--HRYLAAQAEAGAI 269 (386)
T ss_dssp CCCCEEEEECCSTHHHHHHHHHH----------HTTCEEEEEESCTTTSCTTTCSSSSEEEESCH--HHHHHHHHHHTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHH----------hCCCEEEEECCchhhcccccCCCceEEEeCCh--HHHHHhhccccCC
Confidence 45679999999999999999997 789999999998875432211223 4555554 55666656 7
Q ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecCh----hhHHHHHHcCCC
Q 006034 476 TSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDM----MHLLDLKKAGAT 526 (663)
Q Consensus 476 ~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~----~~~~~l~~~Gad 526 (663)
+.-++++++|.|.+....+...+-+.. +..-|.-.-+. ...+.|++.|.+
T Consensus 270 ~~~t~vvvlTh~~~~D~~~L~~aL~~~-~~~YIG~iGSrrk~~~~~~rL~~~G~~ 323 (386)
T 2we8_A 270 DARTVVCVLTHDPKFDVPLLEVALRLP-DIAYIGAMGSRRTHEDRLARLREAGLT 323 (386)
T ss_dssp CTTCEEEECCCCHHHHHHHHHHHTTSS-CCSEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEECChHhHHHHHHHHhcCC-CCCEEEEecChhHHHHHHHHHHhCCCC
Confidence 888899999999777777666665553 13444433333 333444556753
No 76
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.17 E-value=0.0083 Score=62.14 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=58.4
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++|.|. |.+|+.+++.|. +.|++|++++++++..+.+.+.+..++.||.+|++.++++ ++++|.||-
T Consensus 15 ~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih 83 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIR----------AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA-LRGLDGVIF 83 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHH----------HTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH-TTTCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHH----------HCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH-HcCCCEEEE
Confidence 6999996 999999999997 6899999999998776555555788999999999988875 457898876
Q ss_pred EcC
Q 006034 484 MYT 486 (663)
Q Consensus 484 ~~~ 486 (663)
+..
T Consensus 84 ~a~ 86 (342)
T 2x4g_A 84 SAG 86 (342)
T ss_dssp C--
T ss_pred CCc
Confidence 543
No 77
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.12 E-value=0.013 Score=59.38 Aligned_cols=87 Identities=25% Similarity=0.346 Sum_probs=60.3
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHHhcCCCE-EEecCCCH-HHHHhcCCC-CCc
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPI-LYGDASRP-AVLLSAGIT-SPK 479 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~~~~~~v-i~GD~~~~-~~L~~a~i~-~a~ 479 (663)
+|.|+|+|++|..+++.|. +.|+ +|++.|+++++.+.+.+.|... .. +|. +. ++ ++|
T Consensus 3 ~I~iIG~G~mG~~~a~~l~----------~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~---~~~~~~-----~~~~aD 64 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLR----------RSGFKGKIYGYDINPESISKAVDLGIIDEGT---TSIAKV-----EDFSPD 64 (281)
T ss_dssp EEEEESCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHTTSCSEEE---SCGGGG-----GGTCCS
T ss_pred EEEEEecCHHHHHHHHHHH----------hcCCCcEEEEEeCCHHHHHHHHHCCCccccc---CCHHHH-----hcCCCC
Confidence 6899999999999999997 6677 8999999999998887766531 11 222 22 35 899
Q ss_pred EEEEEcCCHHHHHHHHHHH-HHhCCCCcEEEEe
Q 006034 480 AVMIMYTDKKRTIEAVQRL-RLAFPAIPIYARA 511 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~-r~~~~~~~iia~~ 511 (663)
.|++++..+... .++..+ ..+.++ .+++-+
T Consensus 65 vVilavp~~~~~-~v~~~l~~~l~~~-~iv~~~ 95 (281)
T 2g5c_A 65 FVMLSSPVRTFR-EIAKKLSYILSED-ATVTDQ 95 (281)
T ss_dssp EEEECSCHHHHH-HHHHHHHHHSCTT-CEEEEC
T ss_pred EEEEcCCHHHHH-HHHHHHHhhCCCC-cEEEEC
Confidence 999999876432 333333 334555 455543
No 78
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.09 E-value=0.016 Score=61.12 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=71.2
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~~L~~a~i~~a~~vv 482 (663)
.+|.|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+.+... .++ .+..+++ +++|.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~----------~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a--~~~DvVi 86 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLR----------KGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKL--VKPRVVW 86 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHS--CSSCEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcC--CCCCEEE
Confidence 57999999999999999998 78999999999999999998876542 233 3344433 4569999
Q ss_pred EEcCCHHHHHHHHHHH-HHhCCCCcEEEEecCh------hhHHHHHHcCCCeE
Q 006034 483 IMYTDKKRTIEAVQRL-RLAFPAIPIYARAQDM------MHLLDLKKAGATDA 528 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~-r~~~~~~~iia~~~~~------~~~~~l~~~Gad~v 528 (663)
+++.++... .+...+ ..+.++ .++.-..+. +..+.+++.|+..+
T Consensus 87 ~~vp~~~v~-~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 87 LMVPAAVVD-SMLQRMTPLLAAN-DIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp ECSCGGGHH-HHHHHHGGGCCTT-CEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred EeCCHHHHH-HHHHHHHhhCCCC-CEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 999887222 222222 223444 455544432 23344556677554
No 79
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.05 E-value=0.027 Score=57.15 Aligned_cols=68 Identities=10% Similarity=0.133 Sum_probs=52.7
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC---CEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW---PFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~---~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++.|+|+|++|..+++.|. +.|+ +|.+.|+|+++.+.+.+. +..+. .++.+. ++++|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~----------~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~---~~~~~~-----~~~aD 65 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLI----------ANGYDPNRICVTNRSLDKLDFFKEKCGVHTT---QDNRQG-----ALNAD 65 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHH----------HTTCCGGGEEEECSSSHHHHHHHHTTCCEEE---SCHHHH-----HSSCS
T ss_pred CEEEEEcccHHHHHHHHHHH----------HCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe---CChHHH-----HhcCC
Confidence 47999999999999999997 6677 899999999999998874 55432 122333 35789
Q ss_pred EEEEEcCCHH
Q 006034 480 AVMIMYTDKK 489 (663)
Q Consensus 480 ~vv~~~~dd~ 489 (663)
.|+.++..+.
T Consensus 66 vVilav~p~~ 75 (280)
T 3tri_A 66 VVVLAVKPHQ 75 (280)
T ss_dssp EEEECSCGGG
T ss_pred eEEEEeCHHH
Confidence 9999987643
No 80
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.05 E-value=0.014 Score=61.11 Aligned_cols=92 Identities=18% Similarity=0.281 Sum_probs=62.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEec-----------CCCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD-----------ASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD-----------~~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. +.|++|.++|+++++.+.+.+.+-..+.+. .+|.+ +
T Consensus 5 mki~iiG~G~~G~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 71 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLA----------LKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIG---L 71 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHH---H
T ss_pred CeEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHH---H
Confidence 37999999999999999997 678999999999999998877532222332 12322 2
Q ss_pred cCCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEE
Q 006034 473 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYAR 510 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~ 510 (663)
+ ++++|.|++++.++... .+...++. +.++..++..
T Consensus 72 ~-~~~~D~vi~~v~~~~~~-~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 72 A-VKDADVILIVVPAIHHA-SIAANIASYISEGQLIILN 108 (359)
T ss_dssp H-HTTCSEEEECSCGGGHH-HHHHHHGGGCCTTCEEEES
T ss_pred H-HhcCCEEEEeCCchHHH-HHHHHHHHhCCCCCEEEEc
Confidence 1 35799999999887543 22333333 4455334444
No 81
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.03 E-value=0.0067 Score=59.03 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=52.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
.++.|+|.|++|+.+++.|. +.|++|.+.|+++++.+.+.+.+..+. + ++++ ++++|.|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~-----~---~~~~-~~~~DvVi~ 89 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLV----------GSGFKVVVGSRNPKRTARLFPSAAQVT-----F---QEEA-VSSPEVIFV 89 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESSHHHHHHHSBTTSEEE-----E---HHHH-TTSCSEEEE
T ss_pred CEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCcee-----c---HHHH-HhCCCEEEE
Confidence 47999999999999999997 678999999999999888877665442 1 2222 468999999
Q ss_pred EcCCH
Q 006034 484 MYTDK 488 (663)
Q Consensus 484 ~~~dd 488 (663)
++..+
T Consensus 90 av~~~ 94 (215)
T 2vns_A 90 AVFRE 94 (215)
T ss_dssp CSCGG
T ss_pred CCChH
Confidence 98864
No 82
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.00 E-value=0.012 Score=59.86 Aligned_cols=90 Identities=17% Similarity=0.287 Sum_probs=62.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+|.|+|+ |++|..+++.|. +.|++|++.|+++++.+.+.+.|..+ . +..+ -++++|.|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~---~-~~~~-----~~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH----------DSAHHLAAIEIAPEGRDRLQGMGIPL---T-DGDG-----WIDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HSSSEEEEECCSHHHHHHHHHTTCCC---C-CSSG-----GGGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHhcCCCc---C-CHHH-----HhcCCCEEE
Confidence 47999999 999999999997 67899999999999998888765332 1 1122 246899999
Q ss_pred EEcCCHHHHHHHHHHHHH-hCCCCcEEEEecCh
Q 006034 483 IMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDM 514 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~ 514 (663)
+++.++.. ..+...++. +.++ .+++-..+-
T Consensus 73 ~av~~~~~-~~v~~~l~~~l~~~-~ivv~~s~~ 103 (286)
T 3c24_A 73 LALPDNII-EKVAEDIVPRVRPG-TIVLILDAA 103 (286)
T ss_dssp ECSCHHHH-HHHHHHHGGGSCTT-CEEEESCSH
T ss_pred EcCCchHH-HHHHHHHHHhCCCC-CEEEECCCC
Confidence 99987652 222222322 3344 455544443
No 83
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.96 E-value=0.049 Score=55.99 Aligned_cols=128 Identities=16% Similarity=0.123 Sum_probs=78.6
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHHHHHHHhc----------CCCEEEecCCCHHHHHh
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKESRKL----------GFPILYGDASRPAVLLS 472 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~~~~~~~~----------~~~vi~GD~~~~~~L~~ 472 (663)
+|.|+|.|.+|..++..|. +.| ++|+++|.|+++.+....+ ...+.. +|.+
T Consensus 3 kI~VIGaG~~G~~la~~L~----------~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~~---- 65 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLI----------AQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWA---- 65 (309)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGG----
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCHH----
Confidence 6899999999999999997 556 7899999999987665531 112212 2322
Q ss_pred cCCCCCcEEEEEcCCHH---------------HHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHH---cCCCeE
Q 006034 473 AGITSPKAVMIMYTDKK---------------RTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKK---AGATDA 528 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd~---------------~n~----~~~~~~r~~~~~~~iia~~~~~~~~--~~l~~---~Gad~v 528 (663)
.+++||.|++++.... .|+ .++..+++..|+..++. +.|+.+. ..+++ ....++
T Consensus 66 -~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rv 143 (309)
T 1hyh_A 66 -ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV-ISNPVDVITALFQHVTGFPAHKV 143 (309)
T ss_dssp -GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGE
T ss_pred -HhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE-EcCcHHHHHHHHHHhcCCCHHHE
Confidence 2578999999998754 243 34445555577755555 6666544 23333 333456
Q ss_pred EcC-chHHHHHHHHHHHHhcCCCH
Q 006034 529 ILE-NAETSLQLGSKLLKGFGVMS 551 (663)
Q Consensus 529 i~p-~~~~~~~la~~~~~~~~~~~ 551 (663)
+.- ...-..++...+-+.++.++
T Consensus 144 ig~gt~ld~~r~~~~~a~~l~~~~ 167 (309)
T 1hyh_A 144 IGTGTLLDTARMQRAVGEAFDLDP 167 (309)
T ss_dssp EECTTHHHHHHHHHHHHHHHTCCG
T ss_pred eecCccchHHHHHHHHHHHhCCCh
Confidence 655 33223344444444444444
No 84
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.96 E-value=0.015 Score=60.13 Aligned_cols=110 Identities=14% Similarity=0.223 Sum_probs=72.0
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEec---------CCCHHHHHh
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD---------ASRPAVLLS 472 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD---------~~~~~~L~~ 472 (663)
...+|.|+|.|.+|..++..|. +.|++|.++ .++++.+.+++.+......+ .+|.+ +
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~----------~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~---~ 83 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLA----------RAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS---A 83 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHH----------HTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG---G
T ss_pred cCCcEEEECcCHHHHHHHHHHH----------HCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH---H
Confidence 4567999999999999999997 789999999 99999999987665433111 12222 2
Q ss_pred cCCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH-cCCCeEE
Q 006034 473 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK-AGATDAI 529 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l~~-~Gad~vi 529 (663)
++++|.+++++..... -.++..++. +.++..++...|--+..+.+.+ .+ +.++
T Consensus 84 --~~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 84 --VQGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVA 138 (318)
T ss_dssp --GTTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEE
T ss_pred --cCCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEE
Confidence 3689999999987632 223333333 3455446666665665455544 45 5444
No 85
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.93 E-value=0.015 Score=60.92 Aligned_cols=117 Identities=17% Similarity=0.093 Sum_probs=83.0
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCC-CEEEecCCCHHHHHhcCCCCCc
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-PILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~-~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
..+.+++|+|.|.+++.+++.+. ..|++|+++|..++.....+=.+. .++.+++ ++.+.+..++.-+
T Consensus 197 ~p~~~L~I~GaGhva~aLa~la~----------~lgf~V~v~D~R~~~~~~~~fp~a~~v~~~~p--~~~~~~~~~~~~t 264 (362)
T 3on5_A 197 SPKERLIIFGAGPDVPPLVTFAS----------NVGFYTVVTDWRPNQCEKHFFPDADEIIVDFP--ADFLRKFLIRPDD 264 (362)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHH----------HHTEEEEEEESCGGGGCGGGCTTCSEEEESCH--HHHHHHSCCCTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHH----------HCCCeEEEECCCccccccccCCCceEEecCCH--HHHHhhcCCCCCe
Confidence 35678999999999999999997 789999999999886543221233 3565544 5678888888889
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHcCC--CeEEcC
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGA--TDAILE 531 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Ga--d~vi~p 531 (663)
+++++|.|-+....+...+-+. +..-|...-+....+.+.+.|. +.+-.|
T Consensus 265 ~vvv~TH~h~~D~~~L~~aL~~--~~~YiG~iGSr~R~~rl~~~g~~~~ri~~P 316 (362)
T 3on5_A 265 FVLIMTHHFQKDQEILHFLLEK--ELRYIGILGSKERTRRLLQNRKPPDHLYSP 316 (362)
T ss_dssp EEEECCSCHHHHHHHHHHHSSS--CCSEEEESSCHHHHHHHHTSCCCCTTEESS
T ss_pred EEEEEeCCchhhHHHHHHHhcC--CCCEEEEeCCHHHHHHHHhcCCcHhheECC
Confidence 9999999865555555444433 4566777777777777766554 234444
No 86
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.89 E-value=0.0099 Score=53.72 Aligned_cols=70 Identities=14% Similarity=0.203 Sum_probs=52.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+++.|+|.|.+|+.+++.|. +.|.++.+.|+++++.+.+.+ .+..+. +..+.+-. ++++|.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~----------~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~----~~~~Div 84 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFS----------YPQYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSL----IKNNDVI 84 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCC----------TTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHH----HHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHH----hcCCCEE
Confidence 568999999999999999997 678889999999999887654 443332 22232211 3468999
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
+.+++.+
T Consensus 85 i~at~~~ 91 (144)
T 3oj0_A 85 ITATSSK 91 (144)
T ss_dssp EECSCCS
T ss_pred EEeCCCC
Confidence 9999876
No 87
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.015 Score=63.56 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=75.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++++|+|.|.+|+.+++.|.+ ..+.+|++.++++++++.+.+. +..++..|.+|.+.++++ ++++|.||
T Consensus 24 k~VlIiGAGgiG~aia~~L~~---------~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~-l~~~DvVI 93 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAA---------NDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKV-LADNDVVI 93 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHT---------STTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHH-HHTSSEEE
T ss_pred CEEEEECChHHHHHHHHHHHh---------CCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHH-HcCCCEEE
Confidence 479999999999999999972 3478999999999998887653 566778999998777653 45899999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEec-Ch---hhHHHHHHcCCC
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQ-DM---MHLLDLKKAGAT 526 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~~-~~---~~~~~l~~~Gad 526 (663)
.+++..... .+...+-+.+ ..++.... ++ ...+..++.|+.
T Consensus 94 n~tp~~~~~-~v~~a~l~~g--~~vvd~~~~~p~~~~Ll~~Ak~aGv~ 138 (467)
T 2axq_A 94 SLIPYTFHP-NVVKSAIRTK--TDVVTSSYISPALRELEPEIVKAGIT 138 (467)
T ss_dssp ECSCGGGHH-HHHHHHHHHT--CEEEECSCCCHHHHHHHHHHHHHTCE
T ss_pred ECCchhhhH-HHHHHHHhcC--CEEEEeecCCHHHHHHHHHHHHcCCE
Confidence 998865321 2233333332 23333222 22 233456777874
No 88
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.86 E-value=0.0097 Score=64.74 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=75.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc--CCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~--~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
++++|+|.|.+|+.+++.|. +.|++|++.|+++++++.+.+. +...+.+|.+|.+.++++ ++++|.|
T Consensus 4 k~VlViGaG~iG~~ia~~L~----------~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~-l~~~DvV 72 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLT----------DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE-VAKHDLV 72 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------TTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHH-HTTSSEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHH-HcCCcEE
Confidence 46899999999999999998 6789999999999998877653 345788999998877654 4589999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEec-C---hhhHHHHHHcCCCeE
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ-D---MMHLLDLKKAGATDA 528 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~-~---~~~~~~l~~~Gad~v 528 (663)
+.+++..... .+...+-+. +..++.... + .+..+..++.|+..+
T Consensus 73 In~a~~~~~~-~i~~a~l~~--g~~vvd~~~~~~~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 73 ISLIPYTFHA-TVIKSAIRQ--KKHVVTTSYVSPAMMELDQAAKDAGITVM 120 (450)
T ss_dssp EECCC--CHH-HHHHHHHHH--TCEEEESSCCCHHHHHTHHHHHHTTCEEE
T ss_pred EECCccccch-HHHHHHHhC--CCeEEEeecccHHHHHHHHHHHHCCCeEE
Confidence 9988864221 122222222 234554432 2 234456677888644
No 89
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.86 E-value=0.032 Score=61.06 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=74.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCC--EEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFP--ILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~--vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+|-|+|.|.+|..+++.|. +.|++|++.|+++++++.+.+.+.. -+.+-.+-++..+ .++++|.|
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~----------~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~--~l~~aDvV 72 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMN----------DHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVS--KLKKPRRI 72 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH--TBCSSCEE
T ss_pred CEEEEEChhHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHh--hccCCCEE
Confidence 47999999999999999998 7899999999999999998875321 1122222233333 35689999
Q ss_pred EEEcCCHHHHHHHHHHH-HHhCCCCcEEEEecCh------hhHHHHHHcCCCeEEcC
Q 006034 482 MIMYTDKKRTIEAVQRL-RLAFPAIPIYARAQDM------MHLLDLKKAGATDAILE 531 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~-r~~~~~~~iia~~~~~------~~~~~l~~~Gad~vi~p 531 (663)
+++.++++..-.++..+ ..+.++ .++.-..+. +..+.+++.|+..+=.|
T Consensus 73 il~Vp~~~~v~~vl~~l~~~L~~g-~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 73 ILLVKAGQAVDDFIEKLVPLLDTG-DIIIDGGNSEYRDTTRRCRDLKAKGILFVGSG 128 (484)
T ss_dssp EECSCSSHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEecCChHHHHHHHHHHHHhcCCC-CEEEEcCCCCchHHHHHHHHHHhhccccccCC
Confidence 99998853322222223 333444 566544432 22345666788655444
No 90
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.78 E-value=0.0064 Score=64.43 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=66.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++++|+|.|.+|+.+++.+. ..|.+|+++|+++++.+.+.+ .+.. ++.|.++.+.++++ ++++|.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~----------~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~-~~~~DvV 233 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIAL----------GMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKS-VQHADLL 233 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHH-HHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHH-HhCCCEE
Confidence 368999999999999999997 789999999999999887765 4544 56777777766654 4589999
Q ss_pred EEEcCCHHH---HHHHHHHHHHhCCCCcEEE
Q 006034 482 MIMYTDKKR---TIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 482 v~~~~dd~~---n~~~~~~~r~~~~~~~iia 509 (663)
+.++..+.. .+.....++.+.+...++-
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEE
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEE
Confidence 888875431 1112234455555534443
No 91
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.78 E-value=0.011 Score=58.65 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=59.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH--------------HHHHHhc-CCCEEEecCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV--------------VKESRKL-GFPILYGDASR 466 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~--------------~~~~~~~-~~~vi~GD~~~ 466 (663)
...+|.|+|.|++|..+++.|. +.|++|++.|+++++ .+.+.+. +... .. +.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 84 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALA----------DLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH-LA--AF 84 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE-EE--EH
T ss_pred CCCeEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee-cc--CH
Confidence 4568999999999999999998 789999999999997 4555432 2222 11 22
Q ss_pred HHHHHhcCCCCCcEEEEEcCCHHHHHHHHHH-HHHhCCCCcEEEEec
Q 006034 467 PAVLLSAGITSPKAVMIMYTDKKRTIEAVQR-LRLAFPAIPIYARAQ 512 (663)
Q Consensus 467 ~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~-~r~~~~~~~iia~~~ 512 (663)
.+.+ +++|.|++++.++...-.+... ...+ ++ +++.-+.
T Consensus 85 ~e~~-----~~aDvVilavp~~~~~~~~~~i~~~~l-~g-~ivi~~s 124 (245)
T 3dtt_A 85 ADVA-----AGAELVVNATEGASSIAALTAAGAENL-AG-KILVDIA 124 (245)
T ss_dssp HHHH-----HHCSEEEECSCGGGHHHHHHHHCHHHH-TT-SEEEECC
T ss_pred HHHH-----hcCCEEEEccCcHHHHHHHHHhhhhhc-CC-CEEEECC
Confidence 3333 4689999999876433222222 2223 55 4555555
No 92
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.053 Score=59.64 Aligned_cols=117 Identities=18% Similarity=0.173 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cC--CCEEEecCCCHHHHHhcCCCC
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LG--FPILYGDASRPAVLLSAGITS 477 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~--~~vi~GD~~~~~~L~~a~i~~ 477 (663)
....+|-|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+ .. ..+ .. .++.+-+- .++++
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~~~~~gi-~~-~~s~~e~v-~~l~~ 74 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAA----------DHGFTVCAYNRTQSKVDHFLANEAKGKSI-IG-ATSIEDFI-SKLKR 74 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSHHHHHHHHTTTTTSSE-EC-CSSHHHHH-HTSCS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHcccccCCCe-EE-eCCHHHHH-hcCCC
Confidence 46678999999999999999998 789999999999999998876 21 112 11 23333221 24567
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChh------hHHHHHHcCCCeEEcC
Q 006034 478 PKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMM------HLLDLKKAGATDAILE 531 (663)
Q Consensus 478 a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~------~~~~l~~~Gad~vi~p 531 (663)
+|.|++++.++...-.++..+.. +.|+ .++.-..+-. ..+.+.+.|+..+-.|
T Consensus 75 aDvVil~Vp~~~~v~~vl~~l~~~l~~g-~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 75 PRKVMLLVKAGAPVDALINQIVPLLEKG-DIIIDGGNSHFPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp SCEEEECCCSSHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEcCChHHHHHHHHHHHHhCCCC-CEEEECCCCChhHHHHHHHHHHHcCCceeCCC
Confidence 99999999885332222333333 3444 4555443321 2233455677654333
No 93
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.66 E-value=0.011 Score=60.17 Aligned_cols=41 Identities=24% Similarity=0.492 Sum_probs=37.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK 454 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~ 454 (663)
++|.|+|.|.+|..+|+.|. +.|++|++.|.|+++.+.+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la----------~~G~~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA----------FHGFAVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHH
Confidence 57999999999999999998 789999999999998877664
No 94
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.63 E-value=0.034 Score=56.55 Aligned_cols=67 Identities=28% Similarity=0.550 Sum_probs=52.6
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~vv~ 483 (663)
+|.|+|.|++|..+++.|. +.|++|.+.|+|+++.+.+.+.+..+ .++. +.+ +++|.|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~Dvvi~ 62 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLM----------KHGYPLIIYDVFPDACKEFQDAGEQV----VSSPADVA-----EKADRIIT 62 (296)
T ss_dssp CEEEECCSTTHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHTTTCEE----CSSHHHHH-----HHCSEEEE
T ss_pred eEEEEeccHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCee----cCCHHHHH-----hcCCEEEE
Confidence 5889999999999999997 67899999999999999888766432 1233 333 35799999
Q ss_pred EcCCHHH
Q 006034 484 MYTDKKR 490 (663)
Q Consensus 484 ~~~dd~~ 490 (663)
+++++..
T Consensus 63 ~vp~~~~ 69 (296)
T 2gf2_A 63 MLPTSIN 69 (296)
T ss_dssp CCSSHHH
T ss_pred eCCCHHH
Confidence 9876544
No 95
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.63 E-value=0.02 Score=56.79 Aligned_cols=66 Identities=15% Similarity=0.318 Sum_probs=51.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC----CEEEEeCChHHHHHHHh-cCCCEEEecCCC-HHHHHhcCCCC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW----PFVAFDLNPSVVKESRK-LGFPILYGDASR-PAVLLSAGITS 477 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~----~vvvid~d~~~~~~~~~-~~~~vi~GD~~~-~~~L~~a~i~~ 477 (663)
.+|.|+|.|++|..+++.|. +.|+ +|.+.|+|+++.+.+.+ .+..+ .++ .+.+ ++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~----------~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~-----~~ 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMI----------NKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVA-----KN 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHH-----HH
T ss_pred CeEEEECccHHHHHHHHHHH----------hCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHH-----Hh
Confidence 46999999999999999997 6777 99999999999988875 45442 223 3333 35
Q ss_pred CcEEEEEcCCH
Q 006034 478 PKAVMIMYTDK 488 (663)
Q Consensus 478 a~~vv~~~~dd 488 (663)
+|.|+++++.+
T Consensus 64 aDvVilav~~~ 74 (247)
T 3gt0_A 64 ADILILSIKPD 74 (247)
T ss_dssp CSEEEECSCTT
T ss_pred CCEEEEEeCHH
Confidence 78888888654
No 96
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.62 E-value=0.017 Score=56.72 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=57.7
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++++|.|. |.+|+.+++.|. +. |++|+++++++++.+.+ ..+..++.+|.+|++.++++ +++.|
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~----------~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~-~~~~d 71 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLK----------EGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPA-FQGID 71 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHH-HTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHH----------hcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHH-HcCCC
Confidence 356899985 999999999997 45 89999999999877655 35688999999999988775 35688
Q ss_pred EEEEEc
Q 006034 480 AVMIMY 485 (663)
Q Consensus 480 ~vv~~~ 485 (663)
.+|-+.
T Consensus 72 ~vi~~a 77 (253)
T 1xq6_A 72 ALVILT 77 (253)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 887654
No 97
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.58 E-value=0.011 Score=60.82 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=74.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HHHHH--hcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLL--SAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~~L~--~a~i~~a~~ 480 (663)
-+|.|+|.|.+|..++..|. .|++|.++++++++.+.+++.|..+. .+..+ +.... +...+++|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-----------~g~~V~~~~r~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~~~~~D~ 70 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-----------LYHDVTVVTRRQEQAAAIQSEGIRLY-KGGEEFRADCSADTSINSDFDL 70 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----------TTSEEEEECSCHHHHHHHHHHCEEEE-ETTEEEEECCEEESSCCSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHh-----------cCCceEEEECCHHHHHHHHhCCceEe-cCCCeecccccccccccCCCCE
Confidence 36999999999999999993 67899999999999988888776554 22210 00000 123578999
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHc-CCCeE
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKA-GATDA 528 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~-Gad~v 528 (663)
+++++..... -.++..++...++. |+...|--.+.+.+++. +.+.|
T Consensus 71 vilavK~~~~-~~~l~~l~~~~~~~-ivs~~nGi~~~e~l~~~~~~~~v 117 (307)
T 3ego_A 71 LVVTVKQHQL-QSVFSSLERIGKTN-ILFLQNGMGHIHDLKDWHVGHSI 117 (307)
T ss_dssp EEECCCGGGH-HHHHHHTTSSCCCE-EEECCSSSHHHHHHHTCCCSCEE
T ss_pred EEEEeCHHHH-HHHHHHhhcCCCCe-EEEecCCccHHHHHHHhCCCCcE
Confidence 9888876431 12233334444454 77777777777777775 65554
No 98
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.58 E-value=0.059 Score=59.01 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=70.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcC--CCEEEecCCCH-HHHHhcCCCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRP-AVLLSAGITSP 478 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~--~~vi~GD~~~~-~~L~~a~i~~a 478 (663)
.+++|.|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+.. ..+ .. .++. +..+ +++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La----------~~G~~V~v~~r~~~~~~~l~~~~~~~gi-~~-~~s~~e~v~--~l~~a 79 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIE----------SRGYTVSIFNRSREKTEEVIAENPGKKL-VP-YYTVKEFVE--SLETP 79 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSHHHHHHHHHHSTTSCE-EE-CSSHHHHHH--TBCSS
T ss_pred CCCeEEEEccHHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHhhCCCCCe-EE-eCCHHHHHh--CCCCC
Confidence 4567999999999999999998 78999999999999998887641 012 22 2233 3332 34569
Q ss_pred cEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChh------hHHHHHHcCCCeE
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMM------HLLDLKKAGATDA 528 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~------~~~~l~~~Gad~v 528 (663)
|.|++++.++...-.++..++. +.|+ .++.-..+-. ..+.+.+.|+..+
T Consensus 80 DvVil~Vp~~~~v~~vl~~l~~~l~~g-~iIId~s~g~~~~t~~l~~~l~~~g~~~v 135 (480)
T 2zyd_A 80 RRILLMVKAGAGTDAAIDSLKPYLDKG-DIIIDGGNTFFQDTIRRNRELSAEGFNFI 135 (480)
T ss_dssp CEEEECSCSSSHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHCCCCee
Confidence 9999999884322222223333 3444 4555443321 2334555576544
No 99
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.58 E-value=0.0077 Score=64.51 Aligned_cols=83 Identities=14% Similarity=0.275 Sum_probs=60.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++++|+|+|++|+.+|+.++ ..|.+|++.|.||.+.......|+.+. + -++.+ +++|.+
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lr----------afGa~Viv~d~dp~~a~~A~~~G~~vv--~--LeElL-----~~ADIV 306 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLA----------GAGARVKVTEVDPICALQAAMDGFEVV--T--LDDAA-----STADIV 306 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEEC--C--HHHHG-----GGCSEE
T ss_pred cCCEEEEECcCHHHHHHHHHHH----------HCCCEEEEEeCCcchhhHHHhcCceec--c--HHHHH-----hhCCEE
Confidence 3467999999999999999997 789999999999988766666676553 1 13333 478987
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCC
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAI 505 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~ 505 (663)
+.++++ .++.-....+.+.+..
T Consensus 307 v~atgt--~~lI~~e~l~~MK~GA 328 (464)
T 3n58_A 307 VTTTGN--KDVITIDHMRKMKDMC 328 (464)
T ss_dssp EECCSS--SSSBCHHHHHHSCTTE
T ss_pred EECCCC--ccccCHHHHhcCCCCe
Confidence 776654 3344445666676663
No 100
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.57 E-value=0.028 Score=59.08 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=61.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCE-----------EEecCCCHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPI-----------LYGDASRPAVLL 471 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~v-----------i~GD~~~~~~L~ 471 (663)
..+|.|+|.|.+|..++..|. +.|++|.+.|+|+++++.+.+.+.+. +.. .+|. +
T Consensus 29 ~mkI~VIGaG~mG~alA~~La----------~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~---~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA----------RKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDL---K 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCH---H
T ss_pred CCeEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCH---H
Confidence 347999999999999999998 78999999999999999887754221 111 1222 1
Q ss_pred hcCCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEec
Q 006034 472 SAGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQ 512 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~ 512 (663)
++ ++++|.+++++.... --.++..++. +.|+..++...+
T Consensus 95 ea-~~~aDvVilaVp~~~-~~~vl~~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 95 AS-LEGVTDILIVVPSFA-FHEVITRMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp HH-HTTCCEEEECCCHHH-HHHHHHHHGGGCCTTCEEEECCC
T ss_pred HH-HhcCCEEEECCCHHH-HHHHHHHHHHhcCCCCEEEEEeC
Confidence 11 467899999988652 2223333333 334533444443
No 101
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=95.54 E-value=0.12 Score=44.74 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=67.4
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEE
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 508 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~ii 508 (663)
..+.++.++|.|+...+.++ +.|+.+... .+..+.++...-.+.|.+++-.+- +......+..+|+.+|+++++
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLDSWFSSLGATTVLA-ADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVL 83 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 35678999999988755443 467776653 344567777766778988776553 345567888899999988888
Q ss_pred EEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 509 ARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 509 a~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
....+. +......+.|++.++...
T Consensus 84 ~~t~~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 84 VISATENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp EEECCCCHHHHHHHHHHCCSEEEESC
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 776654 444677889999876554
No 102
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.47 E-value=0.011 Score=59.79 Aligned_cols=68 Identities=24% Similarity=0.372 Sum_probs=57.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
.+|+|.|.|.+|+.+++.|. +.|++|++++++++.. ..+..++.||.+|++.++++--+++|.||-
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLT----------AQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 47999999999999999998 7899999999988763 357899999999999887753335998876
Q ss_pred Ec
Q 006034 484 MY 485 (663)
Q Consensus 484 ~~ 485 (663)
+.
T Consensus 70 ~a 71 (286)
T 3gpi_A 70 CV 71 (286)
T ss_dssp CH
T ss_pred eC
Confidence 65
No 103
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.47 E-value=0.023 Score=56.78 Aligned_cols=65 Identities=26% Similarity=0.330 Sum_probs=50.5
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeC--ChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL--NPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~--d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+|.|+|.|++|..+++.|. +.|++|.+.|+ +++..+.+.+.|.. .+.++.+ +++|.|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~----------~~g~~V~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~-----~~aDvvi 61 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLR----------SRGVEVVTSLEGRSPSTIERARTVGVT-----ETSEEDV-----YSCPVVI 61 (264)
T ss_dssp EEEEESCSHHHHHHHHHHH----------HTTCEEEECCTTCCHHHHHHHHHHTCE-----ECCHHHH-----HTSSEEE
T ss_pred eEEEEechHHHHHHHHHHH----------HCCCeEEEeCCccCHHHHHHHHHCCCc-----CCHHHHH-----hcCCEEE
Confidence 4889999999999999997 67899999888 77788877776654 2223333 4789999
Q ss_pred EEcCCHH
Q 006034 483 IMYTDKK 489 (663)
Q Consensus 483 ~~~~dd~ 489 (663)
+++.++.
T Consensus 62 ~~v~~~~ 68 (264)
T 1i36_A 62 SAVTPGV 68 (264)
T ss_dssp ECSCGGG
T ss_pred EECCCHH
Confidence 9988764
No 104
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.47 E-value=0.028 Score=58.08 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=59.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCCh-------HHHHHHHhcCCCEEEecCCCHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNP-------SVVKESRKLGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~-------~~~~~~~~~~~~vi~GD~~~~~~L~~a 473 (663)
...+|.|+|.|.+|..+++.|. +.| ++|++.|+++ +..+.+.+.|. .. .+..+.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~----------~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~s~~e~---- 84 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLG----------GRNAARLAAYDLRFNDPAASGALRARAAELGV---EP-LDDVAG---- 84 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH----------TTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-ESSGGG----
T ss_pred cCCeEEEECccHHHHHHHHHHH----------HcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CC-CCHHHH----
Confidence 3457999999999999999998 788 9999999998 55666666665 11 022233
Q ss_pred CCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 474 GITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
++++|.|+++.+++...-.+......+.++ .++.-.+
T Consensus 85 -~~~aDvVi~avp~~~~~~~~~~i~~~l~~~-~ivv~~s 121 (317)
T 4ezb_A 85 -IACADVVLSLVVGAATKAVAASAAPHLSDE-AVFIDLN 121 (317)
T ss_dssp -GGGCSEEEECCCGGGHHHHHHHHGGGCCTT-CEEEECC
T ss_pred -HhcCCEEEEecCCHHHHHHHHHHHhhcCCC-CEEEECC
Confidence 356899999988764332222222223444 4555444
No 105
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.47 E-value=0.028 Score=55.21 Aligned_cols=73 Identities=18% Similarity=0.094 Sum_probs=58.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--cCCCEEEecCCCHHHHHhc--CCCCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSA--GITSP 478 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--~~~~vi~GD~~~~~~L~~a--~i~~a 478 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ .+..++.+|.+|++.++++ ...+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALH----------ASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 46888887 899999999998 789999999999988776654 3677889999999987764 34567
Q ss_pred cEEEEEcC
Q 006034 479 KAVMIMYT 486 (663)
Q Consensus 479 ~~vv~~~~ 486 (663)
|.+|-...
T Consensus 78 d~vi~~Ag 85 (244)
T 1cyd_A 78 DLLVNNAA 85 (244)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 88876654
No 106
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.39 E-value=0.013 Score=64.07 Aligned_cols=85 Identities=19% Similarity=0.315 Sum_probs=62.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++++|+|+|.+|+.+++.++ ..|.+|+++|.++++.+.+.+.|..+. +.+ ++ ++++|.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lk----------a~Ga~Viv~d~~~~~~~~A~~~Ga~~~-----~l~---e~-l~~aDvV 333 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMK----------GQGARVSVTEIDPINALQAMMEGFDVV-----TVE---EA-IGDADIV 333 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC-----CHH---HH-GGGCSEE
T ss_pred CcCEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCEEe-----cHH---HH-HhCCCEE
Confidence 4568999999999999999997 788999999999999888888787532 222 21 4689999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcE
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPI 507 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~i 507 (663)
+.+++++. +......+.+.+...+
T Consensus 334 i~atgt~~--~i~~~~l~~mk~ggil 357 (494)
T 3ce6_A 334 VTATGNKD--IIMLEHIKAMKDHAIL 357 (494)
T ss_dssp EECSSSSC--SBCHHHHHHSCTTCEE
T ss_pred EECCCCHH--HHHHHHHHhcCCCcEE
Confidence 88887653 2223455666666443
No 107
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.37 E-value=0.027 Score=57.21 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=59.8
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----cCCCEEEecCCCHHHHHhcCCC
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
.++++|.| .|-+|+.+++.|. +.|.+|+++++++++.+.+.+ .+..++.+|.+|++.++++ ++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~----------~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~-~~ 187 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLA----------GEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VK 187 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TT
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH-HH
Confidence 35799999 8999999999998 788999999999988766543 2567888999999877654 56
Q ss_pred CCcEEEEEcC
Q 006034 477 SPKAVMIMYT 486 (663)
Q Consensus 477 ~a~~vv~~~~ 486 (663)
++|.+|-+++
T Consensus 188 ~~DvlVn~ag 197 (287)
T 1lu9_A 188 GAHFVFTAGA 197 (287)
T ss_dssp TCSEEEECCC
T ss_pred hCCEEEECCC
Confidence 7898888775
No 108
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.37 E-value=0.028 Score=56.04 Aligned_cols=65 Identities=15% Similarity=0.215 Sum_probs=51.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CCCEEEecCCCH-HHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRP-AVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~-~~L~~a~i~~a~~vv 482 (663)
++.|+|.|++|+.+++.|. +.|++|.+.|+|+++.+.+.+. +..+ .+|. +.+ +++|.|+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~----------~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~D~Vi 65 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLK----------QTPHELIISGSSLERSKEIAEQLALPY----AMSHQDLI-----DQVDLVI 65 (259)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TSSCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHH-----HTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHH-----hcCCEEE
Confidence 6999999999999999997 6778999999999999888753 5442 2333 333 3789999
Q ss_pred EEcCCH
Q 006034 483 IMYTDK 488 (663)
Q Consensus 483 ~~~~dd 488 (663)
+++.++
T Consensus 66 ~~v~~~ 71 (259)
T 2ahr_A 66 LGIKPQ 71 (259)
T ss_dssp ECSCGG
T ss_pred EEeCcH
Confidence 999854
No 109
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.34 E-value=0.18 Score=51.68 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=81.0
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHH-h--cCC-----CEEEecCCCHHHHHhcC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESR-K--LGF-----PILYGDASRPAVLLSAG 474 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~-~--~~~-----~vi~GD~~~~~~L~~a~ 474 (663)
+|.|+|.|.+|..++..|. ..|+ +++++|.|+++.+... + +.. .-+.. +|. ..
T Consensus 2 kI~VIGaG~vG~~la~~la----------~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-----~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALV----------LRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-----SE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-----GG
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-----HH
Confidence 5899999999999999997 5677 8999999998765422 2 111 11222 222 23
Q ss_pred CCCCcEEEEEcCCHH-----------HHHH----HHHHHHHhCCCCcEEEEecChhhHH--HH-HHcCCCeEEcC-chHH
Q 006034 475 ITSPKAVMIMYTDKK-----------RTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGATDAILE-NAET 535 (663)
Q Consensus 475 i~~a~~vv~~~~dd~-----------~n~~----~~~~~r~~~~~~~iia~~~~~~~~~--~l-~~~Gad~vi~p-~~~~ 535 (663)
+++||.||++.+... .|+. ++..+++..|+..++. +.|+.+.. .+ +....++|+-- ...-
T Consensus 65 ~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~-~tNP~~~~~~~~~~~~~~~rviG~gt~Ld 143 (304)
T 2v6b_A 65 LADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV-TSNPVDLLTDLATQLAPGQPVIGSGTVLD 143 (304)
T ss_dssp GTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEE-CSSSHHHHHHHHHHHSCSSCEEECTTHHH
T ss_pred hCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE-ecCchHHHHHHHHHhCChhcEEeCCcCch
Confidence 679999988874332 4544 3444555678865554 67766542 23 33456667655 4444
Q ss_pred HHHHHHHHHHhcCCCHHHH
Q 006034 536 SLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 536 ~~~la~~~~~~~~~~~~~~ 554 (663)
..++...+-+.+++++..+
T Consensus 144 ~~r~~~~la~~l~v~~~~v 162 (304)
T 2v6b_A 144 SARFRHLMAQHAGVDGTHA 162 (304)
T ss_dssp HHHHHHHHHHHHTSCGGGE
T ss_pred HHHHHHHHHHHhCcCHHHc
Confidence 4566666666666666433
No 110
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.32 E-value=0.035 Score=54.08 Aligned_cols=67 Identities=15% Similarity=0.241 Sum_probs=53.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEE-EeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVA-FDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvv-id~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+|.|+|.|++|..+++.|. +.|++|++ .|+|+++.+.+.+ .+..... ++.+. ++++|.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~----------~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~~~-----~~~aDvV 85 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFT----------AAQIPAIIANSRGPASLSSVTDRFGASVKA---VELKD-----ALQADVV 85 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHH----------HTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCHHH-----HTTSSEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChHHH-----HhcCCEE
Confidence 47999999999999999997 67899999 9999999888765 4555443 23333 3678999
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
++++..+
T Consensus 86 ilavp~~ 92 (220)
T 4huj_A 86 ILAVPYD 92 (220)
T ss_dssp EEESCGG
T ss_pred EEeCChH
Confidence 9998864
No 111
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.31 E-value=0.017 Score=59.58 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=57.7
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEE-EecCCCHHHHHh
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPIL-YGDASRPAVLLS 472 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi-~GD~~~~~~L~~ 472 (663)
..++++|.|. |-+|+.+++.|. +.|++|++++++++..+.+.+ .+..++ .+|.+|++.+++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLL----------EHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHH----------HCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 3457999998 999999999997 689999999999887655432 245566 799999998876
Q ss_pred cCCCCCcEEEEEc
Q 006034 473 AGITSPKAVMIMY 485 (663)
Q Consensus 473 a~i~~a~~vv~~~ 485 (663)
+ +++.|.||-+.
T Consensus 80 ~-~~~~d~vih~A 91 (342)
T 1y1p_A 80 V-IKGAAGVAHIA 91 (342)
T ss_dssp T-TTTCSEEEECC
T ss_pred H-HcCCCEEEEeC
Confidence 5 45789887654
No 112
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.31 E-value=0.041 Score=56.65 Aligned_cols=106 Identities=18% Similarity=0.170 Sum_probs=68.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEE--ecC--------CCHHHHHhc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY--GDA--------SRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~--GD~--------~~~~~L~~a 473 (663)
.+|.|+|.|.+|..++..|. +.|++|.++++++ .+.+++.|..+-. |+. ++++ +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~----------~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~---~- 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ----------RSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPE---E- 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH----------HTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHH---H-
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHH---H-
Confidence 36999999999999999997 6789999999987 3667776654432 211 2332 2
Q ss_pred CCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH-cCCCe
Q 006034 474 GITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK-AGATD 527 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l~~-~Gad~ 527 (663)
++++|.+++++...... .++..++. +.++..++...|--++.+.+.+ .+-+.
T Consensus 67 -~~~~D~vilavk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~~~ 120 (312)
T 3hn2_A 67 -IGPMDLVLVGLKTFANS-RYEELIRPLVEEGTQILTLQNGLGNEEALATLFGAER 120 (312)
T ss_dssp -HCCCSEEEECCCGGGGG-GHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCGGG
T ss_pred -cCCCCEEEEecCCCCcH-HHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCCCc
Confidence 35899999988764322 23334443 4566556666666555555544 44333
No 113
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.31 E-value=0.028 Score=58.73 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=51.7
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH-HHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~-~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+|.|+|+|.+|..+++.|. +.|++|++.|+++++ .+.+.+.|..+. +.++.+ +++|.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~----------~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~~e~~-----~~aDvVi 77 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLK----------DSGVDVTVGLRSGSATVAKAEAHGLKVA----DVKTAV-----AAADVVM 77 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHH----------HTTCCEEEECCTTCHHHHHHHHTTCEEE----CHHHHH-----HTCSEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------HCcCEEEEEECChHHHHHHHHHCCCEEc----cHHHHH-----hcCCEEE
Confidence 47999999999999999997 678999999999876 566666676432 222333 4789898
Q ss_pred EEcCCHHH
Q 006034 483 IMYTDKKR 490 (663)
Q Consensus 483 ~~~~dd~~ 490 (663)
++++++..
T Consensus 78 lavp~~~~ 85 (338)
T 1np3_A 78 ILTPDEFQ 85 (338)
T ss_dssp ECSCHHHH
T ss_pred EeCCcHHH
Confidence 88887643
No 114
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.27 E-value=0.16 Score=52.68 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=86.2
Q ss_pred CcEEEEc-CCcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHH--HHHHHhcCCC-EEEecCCCHHHHHhcCCCC
Q 006034 404 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSV--VKESRKLGFP-ILYGDASRPAVLLSAGITS 477 (663)
Q Consensus 404 ~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~--~~~~~~~~~~-vi~GD~~~~~~L~~a~i~~ 477 (663)
.+|.|+| .|.+|..++..|. +.+ .+++++|.|++. +..+.+.... -+.+ .++.+-++++ +++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~----------~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~a-l~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMK----------MNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAA-LTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHH----------HCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHH-HTT
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHH-cCC
Confidence 4799999 7999999999996 456 789999988872 2233432222 2333 1222233332 568
Q ss_pred CcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH------HHHHHc-C--CCeEEcCch
Q 006034 478 PKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL------LDLKKA-G--ATDAILENA 533 (663)
Q Consensus 478 a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~------~~l~~~-G--ad~vi~p~~ 533 (663)
+|.|+.+.+. | ..|.. ++..+++.+|+..++. ..||-+. ..+++. | .++|+--..
T Consensus 77 aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv-~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~ 155 (326)
T 1smk_A 77 MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNL-ISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTM 155 (326)
T ss_dssp CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEE-CCSSHHHHHHHHHHHHHHHTCCCTTSEEECCH
T ss_pred CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCchHHHHHHHHHHHHHccCCCcccEEEEee
Confidence 8988887641 1 24443 4455677788855555 5777665 223442 3 467887765
Q ss_pred HHHHHHHHHHHHhcCCCHHHH
Q 006034 534 ETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 534 ~~~~~la~~~~~~~~~~~~~~ 554 (663)
+-..++-..+-+.+++++..+
T Consensus 156 Ld~~r~~~~la~~l~v~~~~v 176 (326)
T 1smk_A 156 LDVVRANTFVAEVLGLDPRDV 176 (326)
T ss_dssp HHHHHHHHHHHHHHTCCGGGC
T ss_pred hHHHHHHHHHHHHhCcChhhe
Confidence 556667777777778777544
No 115
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.27 E-value=0.011 Score=63.08 Aligned_cols=81 Identities=17% Similarity=0.299 Sum_probs=58.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.++++|+|+|++|+.+++.|+ ..|.+|++.|.|+.+...+...|+.+. + +++ -++++|.++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lr----------a~Ga~Viv~D~dp~ra~~A~~~G~~v~-----~---Lee-al~~ADIVi 280 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALK----------AMGSIVYVTEIDPICALQACMDGFRLV-----K---LNE-VIRQVDIVI 280 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC-----C---HHH-HTTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEEeCChhhhHHHHHcCCEec-----c---HHH-HHhcCCEEE
Confidence 468999999999999999998 789999999999988776666665432 1 222 245789887
Q ss_pred EEcCCHHHHHHHHHHHHHhCCC
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~ 504 (663)
.++++ .++.-....+.+.++
T Consensus 281 ~atgt--~~lI~~e~l~~MK~g 300 (435)
T 3gvp_A 281 TCTGN--KNVVTREHLDRMKNS 300 (435)
T ss_dssp ECSSC--SCSBCHHHHHHSCTT
T ss_pred ECCCC--cccCCHHHHHhcCCC
Confidence 76543 233334456666666
No 116
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.27 E-value=0.016 Score=60.14 Aligned_cols=68 Identities=29% Similarity=0.404 Sum_probs=55.1
Q ss_pred CCCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 401 EGSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 401 ~~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
...++|+|.|. |-+|+.+++.|. +.|++|++++++++. .+..++.+|.+|++.++++ ++++|
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~-~~~~d 79 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALR----------TQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDA-IMGVS 79 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHH----------HTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHH-HTTCS
T ss_pred cCCCEEEEECCCChHHHHHHHHHH----------hCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHH-HhCCC
Confidence 34568999998 999999999998 789999999998865 5789999999999988775 34788
Q ss_pred EEEEEc
Q 006034 480 AVMIMY 485 (663)
Q Consensus 480 ~vv~~~ 485 (663)
.|+-+.
T Consensus 80 ~vih~A 85 (347)
T 4id9_A 80 AVLHLG 85 (347)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887543
No 117
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.25 E-value=0.036 Score=54.43 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=58.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--cCCCEEEecCCCHHHHHhc--CCCCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSA--GITSP 478 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--~~~~vi~GD~~~~~~L~~a--~i~~a 478 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ .+..++.+|.+|++.++++ ...+.
T Consensus 8 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALH----------ATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred cEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence 56888887 899999999998 789999999999988776654 3577889999999987764 34467
Q ss_pred cEEEEEcC
Q 006034 479 KAVMIMYT 486 (663)
Q Consensus 479 ~~vv~~~~ 486 (663)
|.+|-..+
T Consensus 78 d~vi~~Ag 85 (244)
T 3d3w_A 78 DLLVNNAA 85 (244)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 87776543
No 118
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.22 E-value=0.011 Score=60.78 Aligned_cols=101 Identities=14% Similarity=0.172 Sum_probs=65.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCC-----C-CCEEEEeCChHHHHHHHh-cCCCEEE--ec-------C-CC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-----G-WPFVAFDLNPSVVKESRK-LGFPILY--GD-------A-SR 466 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~-----~-~~vvvid~d~~~~~~~~~-~~~~vi~--GD-------~-~~ 466 (663)
-+|.|+|.|.+|..++..|. +. | ++|.++|+ +++.+.+.+ .|..+.. |+ . ++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~----------~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 77 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLA----------LRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDN 77 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHH----------HHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESC
T ss_pred CEEEEECcCHHHHHHHHHHH----------hCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecC
Confidence 36999999999999999997 55 8 89999999 888888887 6755432 21 0 23
Q ss_pred HHHHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHH
Q 006034 467 PAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLK 521 (663)
Q Consensus 467 ~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l~ 521 (663)
.+. ++++|.+++++.++.. ..++..++. +.++..++...|.....+.++
T Consensus 78 ~~~-----~~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~ 127 (317)
T 2qyt_A 78 PAE-----VGTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADIAERMR 127 (317)
T ss_dssp HHH-----HCCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSHHHHHT
T ss_pred ccc-----cCCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCcHHHHH
Confidence 332 3689999999987653 222223332 233433444455555444443
No 119
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.20 E-value=0.03 Score=55.90 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=50.4
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+|.|+|.|++|..+++.|. +.| ++|.+.|+++++.+.+.+. +..+ ..|.. + -+ ++|.|+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~----------~~g~~~v~~~~r~~~~~~~~~~~~g~~~-~~~~~------~-~~-~~D~vi 62 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLV----------KQGGYRIYIANRGAEKRERLEKELGVET-SATLP------E-LH-SDDVLI 62 (263)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC------C-CC-TTSEEE
T ss_pred EEEEECchHHHHHHHHHHH----------HCCCCeEEEECCCHHHHHHHHHhcCCEE-eCCHH------H-Hh-cCCEEE
Confidence 5889999999999999997 678 8999999999999988764 6543 22221 2 24 789999
Q ss_pred EEcCC
Q 006034 483 IMYTD 487 (663)
Q Consensus 483 ~~~~d 487 (663)
+++..
T Consensus 63 ~~v~~ 67 (263)
T 1yqg_A 63 LAVKP 67 (263)
T ss_dssp ECSCH
T ss_pred EEeCc
Confidence 99883
No 120
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.20 E-value=0.047 Score=56.14 Aligned_cols=70 Identities=16% Similarity=0.268 Sum_probs=54.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~v 481 (663)
..+|.|+|.|++|..+++.|. +.|++|.+.|+++++.+.+.+.+..+ ..+. +.+ +++|.|
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~DvV 90 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLL----------KMGHTVTVWNRTAEKCDLFIQEGARL----GRTPAEVV-----STCDIT 90 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSGGGGHHHHHTTCEE----CSCHHHHH-----HHCSEE
T ss_pred CCeEEEEcccHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHcCCEE----cCCHHHHH-----hcCCEE
Confidence 357999999999999999997 67899999999999998888766532 1222 333 468999
Q ss_pred EEEcCCHHHH
Q 006034 482 MIMYTDKKRT 491 (663)
Q Consensus 482 v~~~~dd~~n 491 (663)
++++.++...
T Consensus 91 i~av~~~~~~ 100 (316)
T 2uyy_A 91 FACVSDPKAA 100 (316)
T ss_dssp EECCSSHHHH
T ss_pred EEeCCCHHHH
Confidence 9999976543
No 121
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.19 E-value=0.073 Score=54.98 Aligned_cols=130 Identities=15% Similarity=0.205 Sum_probs=79.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHHh---cC-----CCEEEecCCCHHHHHhcC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRK---LG-----FPILYGDASRPAVLLSAG 474 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~~---~~-----~~vi~GD~~~~~~L~~a~ 474 (663)
+|.|+|.|.+|..++..|. ..|+ +|+++|.|+++.+.... ++ ..-+.. +|.+ .
T Consensus 2 kI~VIGaG~~G~~la~~l~----------~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~d~~-----~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALL----------MKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA--GDYA-----D 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE--CCGG-----G
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe--CCHH-----H
Confidence 5899999999999999997 5677 89999999988776542 11 112222 3332 2
Q ss_pred CCCCcEEEEEcCCHH-----------HH----HHHHHHHHHhCCCCcEEEEecChhhH--HHHHHc---CCCeEEcC-ch
Q 006034 475 ITSPKAVMIMYTDKK-----------RT----IEAVQRLRLAFPAIPIYARAQDMMHL--LDLKKA---GATDAILE-NA 533 (663)
Q Consensus 475 i~~a~~vv~~~~dd~-----------~n----~~~~~~~r~~~~~~~iia~~~~~~~~--~~l~~~---Gad~vi~p-~~ 533 (663)
+++||.|+++..... .| ..++..+++..|+..++. +.|+.+. ..+.+. ..++|+-- ..
T Consensus 65 ~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rviG~~t~ 143 (319)
T 1a5z_A 65 LKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV-VTNPVDVLTYFFLKESGMDPRKVFGSGTV 143 (319)
T ss_dssp GTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHTCCTTTEEECTTH
T ss_pred hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-eCCcHHHHHHHHHHHhCCChhhEEeeCcc
Confidence 578999999887421 12 234455566678755555 5555443 333332 34566644 33
Q ss_pred HHHHHHHHHHHHhcCCCHH
Q 006034 534 ETSLQLGSKLLKGFGVMSD 552 (663)
Q Consensus 534 ~~~~~la~~~~~~~~~~~~ 552 (663)
+-..++...+.+.+++++.
T Consensus 144 ld~~r~~~~la~~lgv~~~ 162 (319)
T 1a5z_A 144 LDTARLRTLIAQHCGFSPR 162 (319)
T ss_dssp HHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHhCcCHH
Confidence 3344555555555666553
No 122
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.15 E-value=0.077 Score=55.03 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=58.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH----HHHHHHh-------cCCCEEEecCCCHHHH
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS----VVKESRK-------LGFPILYGDASRPAVL 470 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~----~~~~~~~-------~~~~vi~GD~~~~~~L 470 (663)
.++|+|.|. |-+|+.+++.|. +.|++|+++++++. ..+.+.+ .+..++.||.+|++.+
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLL----------KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 468999995 999999999997 78999999998543 3444443 5788999999999998
Q ss_pred HhcCCCCCcEEEEEcC
Q 006034 471 LSAGITSPKAVMIMYT 486 (663)
Q Consensus 471 ~~a~i~~a~~vv~~~~ 486 (663)
+++ ++++|.||-+..
T Consensus 95 ~~~-~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQV-MKGVDHVLHQAA 109 (351)
T ss_dssp HHH-TTTCSEEEECCC
T ss_pred HHH-hcCCCEEEECCc
Confidence 875 358998887654
No 123
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.12 E-value=0.18 Score=52.16 Aligned_cols=133 Identities=20% Similarity=0.202 Sum_probs=82.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHH----HHhc------CCCEEEecCCCHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL------GFPILYGDASRPAVL 470 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~----~~~~------~~~vi~GD~~~~~~L 470 (663)
..+|.|+|.|.+|..++..|. ..+. +++++|.|+++++. +.+. +..+..+| .
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~----------~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~--- 68 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI----------NQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y--- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H---
Confidence 457999999999999999996 4454 89999999988654 3331 22233232 2
Q ss_pred HhcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HH-HHcCC--CeEEc
Q 006034 471 LSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGA--TDAIL 530 (663)
Q Consensus 471 ~~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~~--~l-~~~Ga--d~vi~ 530 (663)
..+++||.+|++.+. | ..|.. ++..+++.+|+. ++..+.||.+.- .+ +..|. .+|+-
T Consensus 69 --~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a-~vlvvtNPvd~~t~~~~k~~g~p~~rviG 145 (326)
T 3pqe_A 69 --EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDG-IFLVATNPVDILTYATWKFSGLPKERVIG 145 (326)
T ss_dssp --GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCS-EEEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred --HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCe-EEEEcCChHHHHHHHHHHhcCCCHHHEEe
Confidence 246789988887642 2 34543 445566678885 455566665432 22 33353 35665
Q ss_pred C-chHHHHHHHHHHHHhcCCCHHHH
Q 006034 531 E-NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 531 p-~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
- ...-..+.-..+-+.+++++..+
T Consensus 146 ~gt~LD~~R~~~~la~~lgv~~~~V 170 (326)
T 3pqe_A 146 SGTTLDSARFRFMLSEYFGAAPQNV 170 (326)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCGGGE
T ss_pred eccccHHHHHHHHHHHHhCCCHHHc
Confidence 4 44434555556666677777544
No 124
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.08 E-value=0.034 Score=56.44 Aligned_cols=90 Identities=17% Similarity=0.174 Sum_probs=60.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCC-EEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFP-ILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~-vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.+|.|+|+|++|..+++.|. +. +++|.+.|+|+++.+.+.+.+.. ....|. ++. ++++|.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~----------~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~--~~~-----~~~aDv 69 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIK----------RDHPHYKIVGYNRSDRSRDIALERGIVDEATADF--KVF-----AALADV 69 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCT--TTT-----GGGCSE
T ss_pred ceEEEEeeCHHHHHHHHHHH----------hCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCH--HHh-----hcCCCE
Confidence 46999999999999999997 33 68899999999999888776543 122221 112 357899
Q ss_pred EEEEcCCHHHHHHHHHHHHH--hCCCCcEEEEec
Q 006034 481 VMIMYTDKKRTIEAVQRLRL--AFPAIPIYARAQ 512 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~--~~~~~~iia~~~ 512 (663)
|++++..+.. ..+...++. +.++ .+++-+.
T Consensus 70 Vilavp~~~~-~~v~~~l~~~~l~~~-~ivi~~~ 101 (290)
T 3b1f_A 70 IILAVPIKKT-IDFIKILADLDLKED-VIITDAG 101 (290)
T ss_dssp EEECSCHHHH-HHHHHHHHTSCCCTT-CEEECCC
T ss_pred EEEcCCHHHH-HHHHHHHHhcCCCCC-CEEEECC
Confidence 9999987654 333333333 3344 4555433
No 125
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.08 E-value=0.0062 Score=61.72 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=62.0
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcC---CCE-EEecCCCHHHHHhcCCCCCcE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG---FPI-LYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~---~~v-i~GD~~~~~~L~~a~i~~a~~ 480 (663)
+|.|+|.|.+|..++..|. +.|++|.++|+++++.+.+...+ ... ..-..++++.+ +++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~d~ 66 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALC----------KQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDL 66 (291)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSE
T ss_pred eEEEECcCHHHHHHHHHHH----------hCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCcccc-----CCCCE
Confidence 5899999999999999997 78899999999987655433222 100 11112344433 46899
Q ss_pred EEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHH
Q 006034 481 VMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDL 520 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l 520 (663)
+++++.++.. ..+...++. +.++..++...+.....+.+
T Consensus 67 vi~~v~~~~~-~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l 106 (291)
T 1ks9_A 67 LLVTLKAWQV-SDAVKSLASTLPVTTPILLIHNGMGTIEEL 106 (291)
T ss_dssp EEECSCGGGH-HHHHHHHHTTSCTTSCEEEECSSSCTTGGG
T ss_pred EEEEecHHhH-HHHHHHHHhhCCCCCEEEEecCCCCcHHHH
Confidence 9999988753 222333333 34554455555544333333
No 126
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.07 E-value=0.037 Score=59.87 Aligned_cols=42 Identities=24% Similarity=0.373 Sum_probs=38.0
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG 456 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~ 456 (663)
+|.|+|.|.+|..++..|. +.|++|+++|.|+++++.+.+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la----------~~G~~V~~~d~~~~~~~~l~~~~ 43 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLS----------ARGHEVIGVDVSSTKIDLINQGK 43 (436)
T ss_dssp EEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHhCCC
Confidence 5889999999999999997 78999999999999999887643
No 127
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.05 E-value=0.039 Score=56.88 Aligned_cols=69 Identities=22% Similarity=0.286 Sum_probs=52.2
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCC--hHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN--PSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d--~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.+|.|+|.|.+|..+++.|. +.|+ +|.+.|++ +++.+.+.+.|..+. .+..+.+ +++|.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~----------~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~---~~~~e~~-----~~aDv 86 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLR----------QAGAIDMAAYDAASAESWRPRAEELGVSCK---ASVAEVA-----GECDV 86 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHSCCEEEEECSSCHHHHHHHHHHTTCEEC---SCHHHHH-----HHCSE
T ss_pred CEEEEECccHHHHHHHHHHH----------HCCCCeEEEEcCCCCHHHHHHHHHCCCEEe---CCHHHHH-----hcCCE
Confidence 57999999999999999997 6788 99999997 577887777665431 1223334 35788
Q ss_pred EEEEcCCHHH
Q 006034 481 VMIMYTDKKR 490 (663)
Q Consensus 481 vv~~~~dd~~ 490 (663)
|++++.++..
T Consensus 87 Vi~~vp~~~~ 96 (312)
T 3qsg_A 87 IFSLVTAQAA 96 (312)
T ss_dssp EEECSCTTTH
T ss_pred EEEecCchhH
Confidence 8888887643
No 128
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.05 E-value=0.0067 Score=59.57 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=58.8
Q ss_pred CcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
++++|.| .|.+|+.+++.|. +.|+ +|++++++++..+.....+..++.+|.+|++.++++ +++.|.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~----------~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~ 87 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEIL----------EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA-FQGHDV 87 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHH----------HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG-GSSCSE
T ss_pred CeEEEECCCcHHHHHHHHHHH----------cCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHH-hcCCCE
Confidence 4789998 4999999999997 7888 999999998765443344678899999999988765 457898
Q ss_pred EEEEcCC
Q 006034 481 VMIMYTD 487 (663)
Q Consensus 481 vv~~~~d 487 (663)
+|-+.+.
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 8877653
No 129
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.02 E-value=0.046 Score=56.58 Aligned_cols=66 Identities=18% Similarity=0.287 Sum_probs=50.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCC----CCEEEEeCChH--HHHHHHhcCCCEEEecCCCHHHHHhcCCCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG----WPFVAFDLNPS--VVKESRKLGFPILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~----~~vvvid~d~~--~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a 478 (663)
+|.|+|.|++|..+++.|. +.| ++|.+.|++++ +.+.+.+.|..+. . +..+.. +++
T Consensus 24 kI~iIG~G~mG~ala~~L~----------~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-~--~~~e~~-----~~a 85 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFT----------AAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-P--HNKETV-----QHS 85 (322)
T ss_dssp CEEEESCSHHHHHHHHHHH----------HTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-S--CHHHHH-----HHC
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-C--ChHHHh-----ccC
Confidence 6999999999999999997 566 89999999986 7888877675532 1 223333 367
Q ss_pred cEEEEEcCCH
Q 006034 479 KAVMIMYTDK 488 (663)
Q Consensus 479 ~~vv~~~~dd 488 (663)
|.|++++.++
T Consensus 86 DvVilav~~~ 95 (322)
T 2izz_A 86 DVLFLAVKPH 95 (322)
T ss_dssp SEEEECSCGG
T ss_pred CEEEEEeCHH
Confidence 8898888854
No 130
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.01 E-value=0.03 Score=59.97 Aligned_cols=81 Identities=14% Similarity=0.242 Sum_probs=55.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.++++|+|+|++|+.+++.|+ ..|.+|++.|.|+.+...+...|+.+. + ++++ ++++|.++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lk----------a~Ga~Viv~D~~p~~a~~A~~~G~~~~-----s---L~ea-l~~ADVVi 271 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALR----------GFGARVVVTEVDPINALQAAMEGYQVL-----L---VEDV-VEEAHIFV 271 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC-----C---HHHH-TTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCChhhhHHHHHhCCeec-----C---HHHH-HhhCCEEE
Confidence 457999999999999999998 789999999999988777776666442 2 2221 34688776
Q ss_pred EEcCCHHHHHHHHHHHHHhCCC
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~ 504 (663)
.++++ .++.-....+.+.++
T Consensus 272 lt~gt--~~iI~~e~l~~MK~g 291 (436)
T 3h9u_A 272 TTTGN--DDIITSEHFPRMRDD 291 (436)
T ss_dssp ECSSC--SCSBCTTTGGGCCTT
T ss_pred ECCCC--cCccCHHHHhhcCCC
Confidence 54443 122222344555555
No 131
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.01 E-value=0.036 Score=53.55 Aligned_cols=50 Identities=18% Similarity=0.279 Sum_probs=42.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
..++.|+|.|++|..+++.|. +.|++|.++|++++ .++++|.++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~----------~~g~~V~~~~~~~~--------------------------~~~~aD~vi 62 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFE----------IAGHEVTYYGSKDQ--------------------------ATTLGEIVI 62 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECTTCC--------------------------CSSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHH--------------------------HhccCCEEE
Confidence 457999999999999999997 78899999998876 467899999
Q ss_pred EEcCCH
Q 006034 483 IMYTDK 488 (663)
Q Consensus 483 ~~~~dd 488 (663)
+++.++
T Consensus 63 ~av~~~ 68 (209)
T 2raf_A 63 MAVPYP 68 (209)
T ss_dssp ECSCHH
T ss_pred EcCCcH
Confidence 998844
No 132
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.96 E-value=0.014 Score=63.71 Aligned_cols=82 Identities=12% Similarity=0.226 Sum_probs=58.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|+|++|+.+|+.+. ..|.+|++.|+++++.......+..+. + ++++ ++++|.+
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~----------~~G~~V~v~d~~~~~~~~a~~~G~~~~-----~---l~el-l~~aDiV 336 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLR----------GLGATVWVTEIDPICALQAAMEGYRVV-----T---MEYA-ADKADIF 336 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSCHHHHHHHHTTTCEEC-----C---HHHH-TTTCSEE
T ss_pred CCCEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCChHhHHHHHHcCCEeC-----C---HHHH-HhcCCEE
Confidence 3457999999999999999998 789999999999987645555565431 2 3322 5689988
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCC
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~ 504 (663)
+.++.. .++.-....+.+.|+
T Consensus 337 i~~~~t--~~lI~~~~l~~MK~g 357 (494)
T 3d64_A 337 VTATGN--YHVINHDHMKAMRHN 357 (494)
T ss_dssp EECSSS--SCSBCHHHHHHCCTT
T ss_pred EECCCc--ccccCHHHHhhCCCC
Confidence 888743 233333456667666
No 133
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.94 E-value=0.079 Score=50.86 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=50.2
Q ss_pred cEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-C-----CCEEEecCCCHHHHHhcCCCC
Q 006034 405 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-G-----FPILYGDASRPAVLLSAGITS 477 (663)
Q Consensus 405 ~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~-----~~vi~GD~~~~~~L~~a~i~~ 477 (663)
++.|+| .|.+|+.+++.|. +.|++|.++|+++++.+.+.+. + ..+-.. +..+.+ ++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~ 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLA----------TLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGM--KNEDAA-----EA 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------TTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE--EHHHHH-----HH
T ss_pred eEEEEcCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhccccccCCCChh--hHHHHH-----hc
Confidence 588999 9999999999998 7789999999999988776652 2 112111 112223 46
Q ss_pred CcEEEEEcCCHHH
Q 006034 478 PKAVMIMYTDKKR 490 (663)
Q Consensus 478 a~~vv~~~~dd~~ 490 (663)
+|.++.++..+..
T Consensus 65 ~D~Vi~~~~~~~~ 77 (212)
T 1jay_A 65 CDIAVLTIPWEHA 77 (212)
T ss_dssp CSEEEECSCHHHH
T ss_pred CCEEEEeCChhhH
Confidence 8999999886553
No 134
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.93 E-value=0.043 Score=60.09 Aligned_cols=74 Identities=22% Similarity=0.336 Sum_probs=53.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHh---------
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLS--------- 472 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~--------- 472 (663)
..-+|.|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+.+.+... .. -++.+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la----------~~G~~V~~~d~~~~~v~~l~~~~~~i~e-~g-l~~~l~~~~~~~~l~~ 74 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLA----------DIGHDVFCLDVDQAKIDILNNGGVPIHE-PG-LKEVIARNRSAGRLRF 74 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTCCSSCC-TT-HHHHHHHHHHTTCEEE
T ss_pred CCceEEEECcCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHCCCCCcCC-CC-HHHHHHHhcccCCEEE
Confidence 4557999999999999999998 7899999999999999999875433211 11 0111211
Q ss_pred -----cCCCCCcEEEEEcCC
Q 006034 473 -----AGITSPKAVMIMYTD 487 (663)
Q Consensus 473 -----a~i~~a~~vv~~~~d 487 (663)
..+++||.++++.+.
T Consensus 75 ttd~~~a~~~aDvviiaVpt 94 (478)
T 2y0c_A 75 STDIEAAVAHGDVQFIAVGT 94 (478)
T ss_dssp ECCHHHHHHHCSEEEECCCC
T ss_pred ECCHHHHhhcCCEEEEEeCC
Confidence 123578999999876
No 135
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.90 E-value=0.038 Score=56.46 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++|+|.|. |.+|+.+++.|. +.|++|++++++++..+ +. +..++.||.+ ++.++++ ++++|.||
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~~~~~~-~~~~d~Vi 67 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIK----------NDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-LEDLINQ-LNDVDAVV 67 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHH-TTTCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHH----------hCCCEEEEEeCCCCccc-CC--ceEEEEcccc-HHHHHHh-hcCCCEEE
Confidence 57999995 999999999998 78999999999965554 33 7899999999 9888775 45899888
Q ss_pred EEcC
Q 006034 483 IMYT 486 (663)
Q Consensus 483 ~~~~ 486 (663)
-+..
T Consensus 68 h~a~ 71 (311)
T 3m2p_A 68 HLAA 71 (311)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 6653
No 136
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.90 E-value=0.033 Score=56.59 Aligned_cols=67 Identities=21% Similarity=0.250 Sum_probs=51.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 484 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~ 484 (663)
+|.|+|+|++|..+++.|. +.|++|.+.| ++++.+.+.+.+..+ ..+.+-+ ++++|.|+++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~ 65 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLA----------RAGHQLHVTT-IGPVADELLSLGAVN----VETARQV----TEFADIIFIM 65 (295)
T ss_dssp EEEECCCSTTHHHHHHHHH----------HTTCEEEECC-SSCCCHHHHTTTCBC----CSSHHHH----HHTCSEEEEC
T ss_pred EEEEEccCHHHHHHHHHHH----------hCCCEEEEEc-CHHHHHHHHHcCCcc----cCCHHHH----HhcCCEEEEE
Confidence 6999999999999999997 6789999999 999988887765432 1232221 2468999999
Q ss_pred cCCHHH
Q 006034 485 YTDKKR 490 (663)
Q Consensus 485 ~~dd~~ 490 (663)
++++..
T Consensus 66 vp~~~~ 71 (295)
T 1yb4_A 66 VPDTPQ 71 (295)
T ss_dssp CSSHHH
T ss_pred CCCHHH
Confidence 987654
No 137
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.83 E-value=0.032 Score=58.19 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=59.0
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCC-CC-CEEEEeCChHHHHHHHh----cCCCEEEecCCCHHHHHhcCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GW-PFVAFDLNPSVVKESRK----LGFPILYGDASRPAVLLSAGI 475 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~-~~-~vvvid~d~~~~~~~~~----~~~~vi~GD~~~~~~L~~a~i 475 (663)
.++++|.|. |.+|+.+++.|. +. |+ +|+++++++++.+.+.+ .+..++.||.+|++.++++ +
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~----------~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~ 89 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVL----------DTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA-L 89 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH-T
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------hhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH-H
Confidence 357899985 999999999997 55 87 99999999987765543 3678899999999988776 4
Q ss_pred CCCcEEEEEcC
Q 006034 476 TSPKAVMIMYT 486 (663)
Q Consensus 476 ~~a~~vv~~~~ 486 (663)
++.|.||-+..
T Consensus 90 ~~~D~Vih~Aa 100 (344)
T 2gn4_A 90 EGVDICIHAAA 100 (344)
T ss_dssp TTCSEEEECCC
T ss_pred hcCCEEEECCC
Confidence 57898877653
No 138
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.81 E-value=0.02 Score=62.17 Aligned_cols=40 Identities=20% Similarity=0.380 Sum_probs=37.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK 454 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~ 454 (663)
+|.|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+
T Consensus 4 kI~VIG~G~vG~~lA~~La----------~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFA----------ELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHH----------hcCCEEEEEECCHHHHHHHHc
Confidence 6999999999999999998 789999999999999998887
No 139
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.79 E-value=0.1 Score=57.03 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=62.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcC--CCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~--~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
.+|.|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+.. ..+ .. .++. +..+ +.+++|.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~----------~~G~~V~v~dr~~~~~~~l~~~~~~~gi-~~-~~s~~e~v~--~l~~aDv 71 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE----------SRGYTVAIYNRTTSKTEEVFKEHQDKNL-VF-TKTLEEFVG--SLEKPRR 71 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTTTSCE-EE-CSSHHHHHH--TBCSSCE
T ss_pred CcEEEEeeHHHHHHHHHHHH----------hCCCEEEEEcCCHHHHHHHHHhCcCCCe-EE-eCCHHHHHh--hccCCCE
Confidence 46999999999999999997 68999999999999998887641 112 22 2233 3332 3457999
Q ss_pred EEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEec
Q 006034 481 VMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQ 512 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~ 512 (663)
|++++.++...-.+...++. +.|+ .++.-..
T Consensus 72 Vilavp~~~~v~~vl~~l~~~l~~g-~iiId~s 103 (474)
T 2iz1_A 72 IMLMVQAGAATDATIKSLLPLLDIG-DILIDGG 103 (474)
T ss_dssp EEECCCTTHHHHHHHHHHGGGCCTT-CEEEECS
T ss_pred EEEEccCchHHHHHHHHHHhhCCCC-CEEEECC
Confidence 99999885432222223333 3445 3444443
No 140
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.75 E-value=0.094 Score=57.39 Aligned_cols=93 Identities=22% Similarity=0.249 Sum_probs=61.4
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CC----CEEEecCCCH-HHHHhcCCCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF----PILYGDASRP-AVLLSAGITSP 478 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~----~vi~GD~~~~-~~L~~a~i~~a 478 (663)
+|.|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+. +. .-+.. .+|. +..+ +++++
T Consensus 3 kIgVIG~G~mG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~-~~~~~e~v~--~l~~a 69 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIA----------EKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAA--SLKKP 69 (478)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHH--HBCSS
T ss_pred EEEEEChHHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE-ECCHHHHHh--cccCC
Confidence 5899999999999999997 7899999999999999888764 31 10122 2333 3333 23578
Q ss_pred cEEEEEcCCHHHHHHHHHHH-HHhCCCCcEEEEe
Q 006034 479 KAVMIMYTDKKRTIEAVQRL-RLAFPAIPIYARA 511 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~-r~~~~~~~iia~~ 511 (663)
|.|++++.++...-.++..+ ..+.++ .++.-.
T Consensus 70 DvVilaVp~~~~v~~vl~~l~~~l~~g-~iIId~ 102 (478)
T 1pgj_A 70 RKALILVQAGAATDSTIEQLKKVFEKG-DILVDT 102 (478)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHHCCTT-CEEEEC
T ss_pred CEEEEecCChHHHHHHHHHHHhhCCCC-CEEEEC
Confidence 99999998853222222333 334555 444433
No 141
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.70 E-value=0.12 Score=56.57 Aligned_cols=110 Identities=18% Similarity=0.217 Sum_probs=69.8
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----cCCCEEEecCCCHH-HHHhcCCCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPA-VLLSAGITSP 478 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----~~~~vi~GD~~~~~-~L~~a~i~~a 478 (663)
+|.|+|.|.+|..+++.|. +.|++|.+.|+++++++.+.+ .+.. . .++.+ ..+. ++++
T Consensus 4 ~IgvIG~G~mG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~---~-~~~~~e~v~~--l~~a 67 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMN----------DHGFVVCAFNRTVSKVDDFLANEAKGTKVL---G-AHSLEEMVSK--LKKP 67 (482)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHHTTTTTSSCE---E-CSSHHHHHHH--BCSS
T ss_pred eEEEEChHHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHhccccCCCeE---E-eCCHHHHHhh--ccCC
Confidence 6999999999999999997 789999999999999998876 2321 1 23332 3322 3589
Q ss_pred cEEEEEcCCHHHHHHHHHHH-HHhCCCCcEEEEec-Ch-----hhHHHHHHcCCCeEEcC
Q 006034 479 KAVMIMYTDKKRTIEAVQRL-RLAFPAIPIYARAQ-DM-----MHLLDLKKAGATDAILE 531 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~-r~~~~~~~iia~~~-~~-----~~~~~l~~~Gad~vi~p 531 (663)
|.|++++.++...-.++..+ ..+.|+ .++.-.. .. +..+.+.+.|+..+-.|
T Consensus 68 DvVilaVp~~~~v~~vl~~l~~~l~~g-~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 68 RRIILLVKAGQAVDNFIEKLVPLLDIG-DIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp CEEEECSCTTHHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 99999998853322223333 334455 4454443 22 12334455576554344
No 142
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.66 E-value=0.19 Score=51.69 Aligned_cols=136 Identities=14% Similarity=0.130 Sum_probs=86.5
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHH--HHHHHhcCCC-EEEec-C-CCHHHHHhcCCC
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSV--VKESRKLGFP-ILYGD-A-SRPAVLLSAGIT 476 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~--~~~~~~~~~~-vi~GD-~-~~~~~L~~a~i~ 476 (663)
+|.|+|. |.+|+.++..|. +.+ .+++++|.|+.. +..+.+...+ -+.+- + +|.+ + .++
T Consensus 2 KI~IiGa~G~VG~~la~~L~----------~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~---~-a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK----------NSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLP---D-CLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH----------TCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHH---H-HHT
T ss_pred EEEEECCCChHHHHHHHHHH----------hCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHH---H-HhC
Confidence 5899998 999999999997 455 689999999832 2233332222 12221 1 2222 1 246
Q ss_pred CCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH------HHHHcC---CCeEEcCc
Q 006034 477 SPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL------DLKKAG---ATDAILEN 532 (663)
Q Consensus 477 ~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~~------~l~~~G---ad~vi~p~ 532 (663)
+||.|+++.+. | ..|.. ++..+++.+|+..++. +.||.+.- .+++.+ .++|+--.
T Consensus 68 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t 146 (314)
T 1mld_A 68 GCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI-ISNPVNSTIPITAEVFKKHGVYNPNKIFGVT 146 (314)
T ss_dssp TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSCHHHHHHHHHHHHHHTTCCCTTSEEECC
T ss_pred CCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCCcchhHHHHHHHHHHcCCCCcceEEEee
Confidence 88988877632 1 23444 4445567788866655 67787653 366655 66788886
Q ss_pred hHHHHHHHHHHHHhcCCCHHHHH
Q 006034 533 AETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
.+-..++-+.+-+.++++|..++
T Consensus 147 ~Ld~~r~~~~la~~l~v~~~~v~ 169 (314)
T 1mld_A 147 TLDIVRANAFVAELKGLDPARVS 169 (314)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCB
T ss_pred cccHHHHHHHHHHHhCcChHhEE
Confidence 65566677777778888875443
No 143
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.66 E-value=0.13 Score=53.62 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=72.7
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+....+.|. ++.+++ .+.|+|+
T Consensus 4 rvgiIG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~--~~ll~~---~~~D~V~ 69 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKM---------IDDAILYAISDVREDRLREMKEKLGVEKAYKDP--HELIED---PNVDAVL 69 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGG---------STTEEEEEEECSCHHHHHHHHHHHTCSEEESSH--HHHHHC---TTCCEEE
T ss_pred EEEEEcCCHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHhCCCceeCCH--HHHhcC---CCCCEEE
Confidence 69999999999999999972 4677776 67999999887765 4554444332 344543 4789999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi~p 531 (663)
++++++.. ...+..+-+.+ .++++. +.+.+..+. .++.|....+..
T Consensus 70 i~tp~~~h-~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 122 (344)
T 3ezy_A 70 VCSSTNTH-SELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGF 122 (344)
T ss_dssp ECSCGGGH-HHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EcCCCcch-HHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee
Confidence 99988643 44444555554 357764 445444433 355677655544
No 144
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.66 E-value=0.0096 Score=62.84 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=67.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEec--------CC--------
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD--------AS-------- 465 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD--------~~-------- 465 (663)
...+++|+|+|++|...++.+. ..|.+|++.|+++++.+.+.+.|..++.-| ..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~----------~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAK----------RLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHH----------HHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 3468999999999999999997 788999999999999998888766554211 11
Q ss_pred --CHHHHHhcCCCCCcEEEEEc--CC-HHHHHHHHHHHHHhCCCCcEEEEe
Q 006034 466 --RPAVLLSAGITSPKAVMIMY--TD-KKRTIEAVQRLRLAFPAIPIYARA 511 (663)
Q Consensus 466 --~~~~L~~a~i~~a~~vv~~~--~d-d~~n~~~~~~~r~~~~~~~iia~~ 511 (663)
+.+.+++ -+.++|.+|.+. +. ....+..-..++.+.|..-++-.+
T Consensus 253 ~~~~~~l~e-~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 253 AQQQQALED-AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHH-HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhhHHHHHH-HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 1234433 368999887654 22 122334456778888774444433
No 145
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.65 E-value=0.026 Score=57.60 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=54.7
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++|.|. |-+|+.+++.|. ++|++|++++++++........+..++.+|.+|++ ++++ ++. |.||-
T Consensus 2 ~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~-~~~-d~vih 68 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLV----------ELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAG-IKG-DVVFH 68 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTT-CCC-SEEEE
T ss_pred EEEEECCCChHHHHHHHHHH----------hCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhh-cCC-CEEEE
Confidence 5899998 999999999998 78999999999876644444567889999999999 6554 334 87776
Q ss_pred EcC
Q 006034 484 MYT 486 (663)
Q Consensus 484 ~~~ 486 (663)
+..
T Consensus 69 ~A~ 71 (312)
T 3ko8_A 69 FAA 71 (312)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 146
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.62 E-value=0.095 Score=56.01 Aligned_cols=112 Identities=15% Similarity=0.139 Sum_probs=68.9
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEE--------------ecCCCH-HH
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY--------------GDASRP-AV 469 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~--------------GD~~~~-~~ 469 (663)
+|.|+|.|.+|..++..|. + |++|+++|.|+++++.+.+.+.++.. --.+|. +.
T Consensus 2 kI~VIG~G~vG~~~A~~La----------~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS----------L-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT----------T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHh----------C-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 5889999999999999997 6 89999999999999998876543210 001222 22
Q ss_pred HHhcCCCCCcEEEEEcCCHH----------HHHHHHHHHHHhCCCCcEEE-EecChhhHHHH-HHcCCCe-EEcCc
Q 006034 470 LLSAGITSPKAVMIMYTDKK----------RTIEAVQRLRLAFPAIPIYA-RAQDMMHLLDL-KKAGATD-AILEN 532 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~dd~----------~n~~~~~~~r~~~~~~~iia-~~~~~~~~~~l-~~~Gad~-vi~p~ 532 (663)
+ +++|.+++++..+. ....++..+.++.++.-++- ..+.+...+.+ +..+.+. +.+|+
T Consensus 71 ~-----~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe 141 (402)
T 1dlj_A 71 Y-----KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPE 141 (402)
T ss_dssp H-----HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCC
T ss_pred h-----cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCc
Confidence 3 36789999987752 12223333333766633333 34444444444 3444433 33444
No 147
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.61 E-value=0.03 Score=55.90 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=55.6
Q ss_pred CCcEEEEcC-Cc-chHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc
Q 006034 403 SEPVVIVGF-GQ-MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 403 ~~~viI~G~-g~-~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a 473 (663)
.+.++|.|. |+ +|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~ 91 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRAL----------LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDAL 91 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHH----------HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence 356888898 75 9999999998 789999999999988665443 2467889999999876543
Q ss_pred ------CCCCCcEEEEEcC
Q 006034 474 ------GITSPKAVMIMYT 486 (663)
Q Consensus 474 ------~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 92 ~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHhCCCcEEEECCC
Confidence 1135677766543
No 148
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=94.60 E-value=0.04 Score=54.75 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=54.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcC--CCEEEecCCCHHHHHhc------C
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRPAVLLSA------G 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~--~~vi~GD~~~~~~L~~a------~ 474 (663)
+.++|-|. +-+|+.+++.|. ++|.+|++.|+|+++.+.+.+++ ...+++|.+|++..+++ .
T Consensus 3 K~vlVTGas~GIG~aia~~la----------~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFL----------EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56788875 569999999998 89999999999999988877644 45678999998876542 2
Q ss_pred CCCCcEEEE
Q 006034 475 ITSPKAVMI 483 (663)
Q Consensus 475 i~~a~~vv~ 483 (663)
..+-|.+|-
T Consensus 73 ~g~iDiLVN 81 (247)
T 3ged_A 73 LQRIDVLVN 81 (247)
T ss_dssp HSCCCEEEE
T ss_pred cCCCCEEEE
Confidence 346676654
No 149
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=94.59 E-value=0.05 Score=53.63 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=57.7
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc--CC
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA--GI 475 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a--~i 475 (663)
..++++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ ....++.+|.+|++.++++ ..
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH----------KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc
Confidence 4567788876 678999999998 789999999999998877654 3567888999999877653 33
Q ss_pred CCCcEEEEEc
Q 006034 476 TSPKAVMIMY 485 (663)
Q Consensus 476 ~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 83 ~~id~li~~A 92 (249)
T 3f9i_A 83 SNLDILVCNA 92 (249)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5678776544
No 150
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.52 E-value=0.013 Score=63.73 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=60.0
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|+|++|+.+|+.+. ..|.+|++.|+++++.....+.++.+ .+ ++++ ++++|.+
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~----------~~G~~Viv~d~~~~~~~~a~~~g~~~-----~~---l~el-l~~aDiV 316 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMK----------GLGARVYITEIDPICAIQAVMEGFNV-----VT---LDEI-VDKGDFF 316 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSCHHHHHHHHTTTCEE-----CC---HHHH-TTTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHH----------hCcCEEEEEeCChhhHHHHHHcCCEe-----cC---HHHH-HhcCCEE
Confidence 3467999999999999999997 78999999999998875566666643 12 3222 5789988
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEE
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia 509 (663)
+.++.. .++.-....+.+.|+. +++
T Consensus 317 i~~~~t--~~lI~~~~l~~MK~ga-ili 341 (479)
T 1v8b_A 317 ITCTGN--VDVIKLEHLLKMKNNA-VVG 341 (479)
T ss_dssp EECCSS--SSSBCHHHHTTCCTTC-EEE
T ss_pred EECCCh--hhhcCHHHHhhcCCCc-EEE
Confidence 887643 2333234555666663 444
No 151
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.52 E-value=0.017 Score=61.09 Aligned_cols=71 Identities=15% Similarity=0.057 Sum_probs=57.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++|.|. |.+|+.+++.|. +.|++|++++++++........+..++.+|.+|++.++++ ++++|.||
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vi 98 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLK----------HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV-TEGVDHVF 98 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHH-HTTCSEEE
T ss_pred CeEEEECCccHHHHHHHHHHH----------HCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHH-hCCCCEEE
Confidence 57999998 999999999997 6799999999987654333345688999999999988765 35789887
Q ss_pred EEc
Q 006034 483 IMY 485 (663)
Q Consensus 483 ~~~ 485 (663)
-+.
T Consensus 99 h~A 101 (379)
T 2c5a_A 99 NLA 101 (379)
T ss_dssp ECC
T ss_pred ECc
Confidence 664
No 152
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.49 E-value=0.034 Score=57.91 Aligned_cols=69 Identities=16% Similarity=0.270 Sum_probs=52.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEec---------CCCHHHHHhcC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD---------ASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD---------~~~~~~L~~a~ 474 (663)
.+|.|+|.|.+|..++..|. +.|++|.++|++ ++.+.+++.|..+...+ .+|++ +
T Consensus 4 mkI~IiGaG~~G~~~a~~L~----------~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~-- 67 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLA----------LAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAA---A-- 67 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHH----------HTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHH---H--
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHH---H--
Confidence 47999999999999999997 688999999986 67777877776543211 12333 2
Q ss_pred CCCCcEEEEEcCCH
Q 006034 475 ITSPKAVMIMYTDK 488 (663)
Q Consensus 475 i~~a~~vv~~~~dd 488 (663)
++++|.+++++...
T Consensus 68 ~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 68 LGEQDVVIVAVKAP 81 (335)
T ss_dssp HCCCSEEEECCCHH
T ss_pred cCCCCEEEEeCCch
Confidence 36899999998874
No 153
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.45 E-value=0.039 Score=53.82 Aligned_cols=73 Identities=19% Similarity=0.176 Sum_probs=56.4
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc--CCCEEEecCCCHHHHHhc------
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~--~~~vi~GD~~~~~~L~~a------ 473 (663)
.++++|.|. |.+|+.+++.|. ++|++|+++++++++.+.+.+. +..++.+|.+|++.++++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLH----------AKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHH
Confidence 456888875 789999999998 7899999999999887766542 578899999999876543
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 75 ~~~~id~li~~A 86 (234)
T 2ehd_A 75 AFGELSALVNNA 86 (234)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 113568776654
No 154
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=94.42 E-value=0.058 Score=61.25 Aligned_cols=119 Identities=21% Similarity=0.083 Sum_probs=82.2
Q ss_pred cCCCCcEEEEcCCcc------hHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHHHHHHHh----cCCCEEEecCCCHH
Q 006034 400 YEGSEPVVIVGFGQM------GQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESRK----LGFPILYGDASRPA 468 (663)
Q Consensus 400 ~~~~~~viI~G~g~~------g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~~~~~~~----~~~~vi~GD~~~~~ 468 (663)
+..++|||+|++|.- =+....-|+. +.+-+ ++-.++|++-. +.-+ ++++. ....++.|++...+
T Consensus 374 ~~~~~HivvC~~~~~~s~~~gl~~fvmpLRa---sn~~~-~elk~IV~lg~~~~~~-~ew~~l~nfp~iy~~~Gspl~~~ 448 (726)
T 3mt5_A 374 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRA---SNFHY-HELKHIVFVGSIEYLK-REWETLHNFPKVSILPGTPLSRA 448 (726)
T ss_dssp SCCCSCEEEEEECCTTSCCCCTHHHHTGGGB---TTSCG-GGCCCEEEEECHHHHH-HHHHHHTTSSSEEEEESCTTCHH
T ss_pred hcccCcEEEEEecCCCCcchhhhhheeeccc---ccCCH-hHcCCEEEECCCccCH-HHHHHHhcCCceEEecCCcCChH
Confidence 578999999999775 3556666761 22211 12245666643 4433 33443 34667899999999
Q ss_pred HHHhcCCCCCcEEEEEcCC----------HHHHHHHHHHHHHh-------------------------------------
Q 006034 469 VLLSAGITSPKAVMIMYTD----------KKRTIEAVQRLRLA------------------------------------- 501 (663)
Q Consensus 469 ~L~~a~i~~a~~vv~~~~d----------d~~n~~~~~~~r~~------------------------------------- 501 (663)
-|++|||+.|+..|+.... |.+++++++..|.+
T Consensus 449 dL~~~~i~~c~~cvils~~~~~~~~~~l~D~e~ila~lni~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (726)
T 3mt5_A 449 DLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQ 528 (726)
T ss_dssp HHHHTTGGGCSEEEEEECC----------CHHHHHHHHHHHTCEEC----------------------------------
T ss_pred hHHHhCHhhCCEEEEecCCCCCcCCcccchhhhhhhhhcccccccccccccccccccccccccccccccccCccchhhhc
Confidence 9999999999988887541 45667667666654
Q ss_pred -----CCCCcEEEEecChhhHHHHHHc
Q 006034 502 -----FPAIPIYARAQDMMHLLDLKKA 523 (663)
Q Consensus 502 -----~~~~~iia~~~~~~~~~~l~~~ 523 (663)
+++++++....++.+.+.+.+.
T Consensus 529 ~~~~~~~~i~iitEL~~~sni~fl~~~ 555 (726)
T 3mt5_A 529 PSITTGVNIPIITELVNDTNVQFLDQD 555 (726)
T ss_dssp -CCEEGGGSCEEEEESCGGGGTTSCSS
T ss_pred ccccccCCCceEEEecCCccceeeeec
Confidence 3467899999999999888764
No 155
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.39 E-value=0.031 Score=58.55 Aligned_cols=73 Identities=18% Similarity=0.089 Sum_probs=57.4
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCC--CCCCEEEEeCChH-------------HHHHHHhcCCCEEEecCCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNT--VGWPFVAFDLNPS-------------VVKESRKLGFPILYGDASR 466 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~--~~~~vvvid~d~~-------------~~~~~~~~~~~vi~GD~~~ 466 (663)
.++|+|.|. |-+|+.+++.|. + .|++|++++++++ ........+..++.||.+|
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 79 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQ----------ENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN 79 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------hhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC
Confidence 357899975 999999999997 6 8999999998664 1122223456889999999
Q ss_pred HHHHHhcCCCCCcEEEEEc
Q 006034 467 PAVLLSAGITSPKAVMIMY 485 (663)
Q Consensus 467 ~~~L~~a~i~~a~~vv~~~ 485 (663)
++.++++...+.|.||-+.
T Consensus 80 ~~~~~~~~~~~~D~vih~A 98 (362)
T 3sxp_A 80 PLDLRRLEKLHFDYLFHQA 98 (362)
T ss_dssp HHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHhhccCCCEEEECC
Confidence 9999998677899887554
No 156
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.39 E-value=0.045 Score=56.92 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=53.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEe-------c-CCCHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYG-------D-ASRPAVLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~G-------D-~~~~~~L~~a 473 (663)
..-+|.|+|.|.+|..++..|. +.|++|.+.|+++++++.+.+.+.+. +. . .+| .++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~----------~~G~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~---~~~- 77 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLH----------ENGEEVILWARRKEIVDLINVSHTSP-YVEESKITVRATND---LEE- 77 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHHSCBT-TBTTCCCCSEEESC---GGG-
T ss_pred cCCcEEEECcCHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHHhCCcc-cCCCCeeeEEEeCC---HHH-
Confidence 4457999999999999999997 78999999999999999888765321 00 0 012 222
Q ss_pred CCCCCcEEEEEcCCH
Q 006034 474 GITSPKAVMIMYTDK 488 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd 488 (663)
++++|.|++++.+.
T Consensus 78 -~~~aDvVil~vk~~ 91 (335)
T 1z82_A 78 -IKKEDILVIAIPVQ 91 (335)
T ss_dssp -CCTTEEEEECSCGG
T ss_pred -hcCCCEEEEECCHH
Confidence 67899999998863
No 157
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.29 E-value=0.046 Score=59.09 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=68.4
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC---CEEEEeCChHHHHHHHhcCCCEEEecCCCH---HHHHhcC
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW---PFVAFDLNPSVVKESRKLGFPILYGDASRP---AVLLSAG 474 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~---~vvvid~d~~~~~~~~~~~~~vi~GD~~~~---~~L~~a~ 474 (663)
..+++|+|+|+|.+|+.+++.|.+ ..+. +++++|.+++..+.....+.....-+.++. +++.++
T Consensus 11 ~~~~rVlIIGaGgVG~~va~lla~---------~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aL- 80 (480)
T 2ph5_A 11 LFKNRFVILGFGCVGQALMPLIFE---------KFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGST- 80 (480)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHH---------HBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGG-
T ss_pred cCCCCEEEECcCHHHHHHHHHHHh---------CCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHH-
Confidence 466789999999999999999973 4555 799999987764434444666666665554 345443
Q ss_pred CCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 475 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 475 i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
+++.|.||- ...+..|+.+...+.+.+. ..+-.++
T Consensus 81 l~~~DvVIN-~s~~~~~l~Im~acleaGv--~YlDTa~ 115 (480)
T 2ph5_A 81 LEENDFLID-VSIGISSLALIILCNQKGA--LYINAAT 115 (480)
T ss_dssp CCTTCEEEE-CCSSSCHHHHHHHHHHHTC--EEEESSC
T ss_pred hcCCCEEEE-CCccccCHHHHHHHHHcCC--CEEECCC
Confidence 455686654 4455678888889999864 4555543
No 158
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.23 E-value=0.071 Score=54.69 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=51.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
-++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+. .|.. + .+.+-+.+. +++|.|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~---------~~~~elvav~d~~~~~~~~---~g~~--~---~~~~~l~~~--~~~DvVi 70 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALRE---------APDFEIAGIVRRNPAEVPF---ELQP--F---RVVSDIEQL--ESVDVAL 70 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECC----------CCTT--S---CEESSGGGS--SSCCEEE
T ss_pred CEEEEECChHHHHHHHHHHhc---------CCCCEEEEEEcCCHHHHHH---cCCC--c---CCHHHHHhC--CCCCEEE
Confidence 479999999999999999972 4677877 68999987664 3433 1 122223333 7899999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEE
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~ 510 (663)
++++++. ....+..+.+.+ .+++..
T Consensus 71 iatp~~~-h~~~~~~al~aG--~~Vi~e 95 (304)
T 3bio_A 71 VCSPSRE-VERTALEILKKG--ICTADS 95 (304)
T ss_dssp ECSCHHH-HHHHHHHHHTTT--CEEEEC
T ss_pred ECCCchh-hHHHHHHHHHcC--CeEEEC
Confidence 9998653 344455555544 356654
No 159
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.22 E-value=0.42 Score=48.99 Aligned_cols=135 Identities=13% Similarity=0.140 Sum_probs=81.4
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cC-----CC-EEEecCCCHHHHHhcCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LG-----FP-ILYGDASRPAVLLSAGI 475 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~-----~~-vi~GD~~~~~~L~~a~i 475 (663)
+|.|+|.|.+|..++..|.+ ...+++|+++|.|+++++.... +. .. -+... +|. + . +
T Consensus 2 kI~VIGaG~vG~~la~~la~--------~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-~-l 67 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAE--------KQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-NDY---A-D-T 67 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------TTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-SCG---G-G-G
T ss_pred EEEEECCCHHHHHHHHHHHh--------CCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC-CCH---H-H-H
Confidence 58999999999999999972 1147899999999988765431 11 11 12221 232 2 2 6
Q ss_pred CCCcEEEEEcCCH---------H--HHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-cCC--CeEEcC-chH
Q 006034 476 TSPKAVMIMYTDK---------K--RTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TDAILE-NAE 534 (663)
Q Consensus 476 ~~a~~vv~~~~dd---------~--~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~~-~Ga--d~vi~p-~~~ 534 (663)
++||.++++.+.. - .|.. ++..+++..|+..++. +.|+-+. ..+++ .|. .+++-- ...
T Consensus 68 ~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv-~tNP~~~~~~~~~~~~~~~~~rviG~gt~l 146 (310)
T 1guz_A 68 ANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV-VSNPLDIMTHVAWVRSGLPKERVIGMAGVL 146 (310)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE-CCSSHHHHHHHHHHHHCSCGGGEEEECHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-EcCchHHHHHHHHHhcCCChHHEEECCCch
Confidence 8999999988431 1 4443 3444555678865555 4555443 23443 333 356655 444
Q ss_pred HHHHHHHHHHHhcCCCHHHH
Q 006034 535 TSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 535 ~~~~la~~~~~~~~~~~~~~ 554 (663)
-..++.+.+-+.+++++..+
T Consensus 147 d~~r~~~~la~~l~v~~~~v 166 (310)
T 1guz_A 147 DAARFRSFIAMELGVSMQDI 166 (310)
T ss_dssp HHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHhCCCHHHe
Confidence 44566666666667766443
No 160
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.16 E-value=0.088 Score=54.38 Aligned_cols=41 Identities=27% Similarity=0.503 Sum_probs=36.7
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR 453 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~ 453 (663)
.++|.|+|.|.+|..+|..|. +.|++|++.|.|++..+.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la----------~~G~~V~l~d~~~~~~~~~~ 46 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFA----------SGGFRVKLYDIEPRQITGAL 46 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHH
Confidence 357999999999999999997 78999999999999887764
No 161
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.12 E-value=0.019 Score=60.95 Aligned_cols=111 Identities=17% Similarity=0.212 Sum_probs=72.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|.|+.|+.+++.++ +.|++++++|.+++.- ........+.+|.+|.+.+.+.- +++|.+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~----------~lG~~viv~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~~-~~~dvi 77 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQ----------KMGYKVVVLDPSEDCP--CRYVAHEFIQAKYDDEKALNQLG-QKCDVI 77 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCTTCT--TGGGSSEEEECCTTCHHHHHHHH-HHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEECCCCCh--hhhhCCEEEECCCCCHHHHHHHH-HhCCcc
Confidence 3467999999999999999998 7899999999887631 12223457789999999887763 457865
Q ss_pred EEEcCCHHHHHHHHHHHHH---hCCCCcEEEEecChhhHH-HHHHcCCCe
Q 006034 482 MIMYTDKKRTIEAVQRLRL---AFPAIPIYARAQDMMHLL-DLKKAGATD 527 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~---~~~~~~iia~~~~~~~~~-~l~~~Gad~ 527 (663)
....++ .+......+.+ ..|+...+..+.|....+ .++++|+..
T Consensus 78 ~~~~E~--~~~~~l~~l~~~~~v~p~~~~~~~~~dK~~~k~~l~~~Gip~ 125 (377)
T 3orq_A 78 TYEFEN--ISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKV 125 (377)
T ss_dssp EESSTT--SCHHHHHHHHHHSCCTTTTHHHHHHHSHHHHHHHHHHTTCCB
T ss_pred eecccc--cCHHHHHHHhhhcCCCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 332322 22222222222 234445555556655443 677888653
No 162
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.09 E-value=0.052 Score=57.12 Aligned_cols=68 Identities=19% Similarity=0.281 Sum_probs=51.0
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCC------------CEEEecCCCHHHHHh
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF------------PILYGDASRPAVLLS 472 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~------------~vi~GD~~~~~~L~~ 472 (663)
+|.|+|.|.+|..++..|. +.|++|.++|+++++.+.+.+.+. .+.. .+|.+ +
T Consensus 17 kI~iIG~G~mG~~la~~L~----------~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~---~ 81 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLS----------KKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF--TSDVE---K 81 (366)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE--ESCHH---H
T ss_pred eEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHcCcccccccccccccceee--eCCHH---H
Confidence 7999999999999999997 788999999999999988876431 1111 12222 1
Q ss_pred cCCCCCcEEEEEcCCH
Q 006034 473 AGITSPKAVMIMYTDK 488 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd 488 (663)
+ ++++|.|++++.++
T Consensus 82 ~-~~~aDvVilav~~~ 96 (366)
T 1evy_A 82 A-YNGAEIILFVIPTQ 96 (366)
T ss_dssp H-HTTCSSEEECCCHH
T ss_pred H-HcCCCEEEECCChH
Confidence 1 35789999998864
No 163
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.04 E-value=0.023 Score=58.65 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=54.0
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--cCCCEEEecCCCHHHHHhcCCC--C
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSAGIT--S 477 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--~~~~vi~GD~~~~~~L~~a~i~--~ 477 (663)
..+++|.|. |-+|+.+++.|. +.|++|++++++++......+ .+..++.+|.+|++.++++ ++ +
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~-~~~~~ 88 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWL----------PQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERA-FDSFK 88 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHG----------GGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHH-HHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHH-HhhcC
Confidence 357999987 999999999997 779999999986543211111 3567899999999877654 23 6
Q ss_pred CcEEEEEcC
Q 006034 478 PKAVMIMYT 486 (663)
Q Consensus 478 a~~vv~~~~ 486 (663)
.|+||-+..
T Consensus 89 ~D~vih~A~ 97 (330)
T 2pzm_A 89 PTHVVHSAA 97 (330)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 788776653
No 164
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.03 E-value=0.13 Score=52.52 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=35.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHH
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 452 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~ 452 (663)
++|.|+|.|.+|..+|..|. +.|++|+++|.|+++.+.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la----------~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA----------ATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHH
Confidence 57999999999999999997 6899999999999987764
No 165
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.02 E-value=0.064 Score=55.77 Aligned_cols=72 Identities=21% Similarity=0.197 Sum_probs=56.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH----HHHHHH-------hcCCCEEEecCCCHHHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS----VVKESR-------KLGFPILYGDASRPAVLL 471 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~----~~~~~~-------~~~~~vi~GD~~~~~~L~ 471 (663)
++++|.|. |-+|+.+++.|. +.|++|+++++++. ..+.+. ..+..++.||.+|++.++
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 97 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLL----------KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN 97 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence 47999998 999999999997 67999999998653 333332 246788999999999887
Q ss_pred hcCCCCCcEEEEEcC
Q 006034 472 SAGITSPKAVMIMYT 486 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~ 486 (663)
++ ++++|.||-+..
T Consensus 98 ~~-~~~~d~vih~A~ 111 (352)
T 1sb8_A 98 NA-CAGVDYVLHQAA 111 (352)
T ss_dssp HH-HTTCSEEEECCS
T ss_pred HH-hcCCCEEEECCc
Confidence 65 347898887654
No 166
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=94.00 E-value=0.19 Score=51.64 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=68.9
Q ss_pred CcEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
-+|.|+|+|++|+. .++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.. -.+|.+.| -.++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~~~~~g~~----~~~~~~~l----~~~~D~ 68 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAA---------ASDWTLQGAWSPTRAKALPICESWRIP----YADSLSSL----AASCDA 68 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHS---------CSSEEEEEEECSSCTTHHHHHHHHTCC----BCSSHHHH----HTTCSE
T ss_pred ceEEEECCCHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCC----ccCcHHHh----hcCCCE
Confidence 37999999999996 8888862 4577776 88999999887665 3554 23455555 257899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEE
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAI 529 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi 529 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|+...+
T Consensus 69 V~i~tp~~~h-~~~~~~al~~G--~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 69 VFVHSSTASH-FDVVSTLLNAG--VHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp EEECSCTTHH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeCCchhH-HHHHHHHHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 9999987543 34444444443 356653 22333333 33556776655
No 167
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.99 E-value=0.2 Score=54.55 Aligned_cols=70 Identities=20% Similarity=0.335 Sum_probs=51.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----------cC---------CCEEEe
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LG---------FPILYG 462 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----------~~---------~~vi~G 462 (663)
-++|.|+|.|.+|..+|..|. +.|++|+++|.|++..+...+ .+ ...-.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la----------~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i- 105 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA----------RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF- 105 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-
T ss_pred CCEEEEECcCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-
Confidence 357999999999999999998 789999999999988766532 11 00111
Q ss_pred cCCCHHHHHhcCCCCCcEEEEEcCCHH
Q 006034 463 DASRPAVLLSAGITSPKAVMIMYTDKK 489 (663)
Q Consensus 463 D~~~~~~L~~a~i~~a~~vv~~~~dd~ 489 (663)
.+|.+ .+++||.||.++.++.
T Consensus 106 -~~~~~-----~~~~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 106 -SSSTK-----ELSTVDLVVEAVFEDM 126 (463)
T ss_dssp -ESCGG-----GGTTCSEEEECCCSCH
T ss_pred -cCCHH-----HHCCCCEEEEcCCCCH
Confidence 22322 2578999999998864
No 168
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.98 E-value=0.078 Score=52.29 Aligned_cols=72 Identities=21% Similarity=0.303 Sum_probs=56.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhc------CC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSA------GI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a------~i 475 (663)
++++|.|. |.+|+.+++.|. ++|++|+++++++++.+...+ .+..++.+|.+|++.++++ ..
T Consensus 6 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFA----------KEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46888886 789999999998 789999999999988877655 3577889999999877653 11
Q ss_pred CCCcEEEEEc
Q 006034 476 TSPKAVMIMY 485 (663)
Q Consensus 476 ~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 76 g~id~lvn~A 85 (245)
T 1uls_A 76 GRLDGVVHYA 85 (245)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3567776554
No 169
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.97 E-value=0.04 Score=55.24 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=67.6
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
++.|+|.|.+|+.+++.|. +.|.++.+.|+++++.+.+.+ .+.. . . .++++ +++|.++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~----------~~g~~v~v~~r~~~~~~~l~~~~~~~--~---~---~~~~~--~~~Divi~ 177 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALR----------EAGLEVWVWNRTPQRALALAEEFGLR--A---V---PLEKA--REARLLVN 177 (263)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHHTCE--E---C---CGGGG--GGCSEEEE
T ss_pred eEEEECCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhccc--h---h---hHhhc--cCCCEEEE
Confidence 8999999999999999997 667799999999998877765 2432 1 1 23444 68999999
Q ss_pred EcCCHHH-HHHHHHHHHHhCCCCcEEEEecChh---hHHHHHHcCCCeEEcC
Q 006034 484 MYTDKKR-TIEAVQRLRLAFPAIPIYARAQDMM---HLLDLKKAGATDAILE 531 (663)
Q Consensus 484 ~~~dd~~-n~~~~~~~r~~~~~~~iia~~~~~~---~~~~l~~~Gad~vi~p 531 (663)
+++.... +..-......+.++..++-...++. ..+..++.|+ .+++-
T Consensus 178 ~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~-~~v~g 228 (263)
T 2d5c_A 178 ATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGL-KVQTG 228 (263)
T ss_dssp CSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTC-EEECS
T ss_pred ccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcC-EEECc
Confidence 9987631 1000001222344433443333332 3455677888 44433
No 170
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.94 E-value=0.18 Score=52.25 Aligned_cols=138 Identities=9% Similarity=0.076 Sum_probs=84.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC-------CCEEEEeCC----hHHHHH----HHhcCCCEEEecCCCH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-------WPFVAFDLN----PSVVKE----SRKLGFPILYGDASRP 467 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~-------~~vvvid~d----~~~~~~----~~~~~~~vi~GD~~~~ 467 (663)
.+|.|+|. |.+|+.++..|. ..+ .+++++|.+ +++.+. +.+....+ .+|.+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~----------~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIA----------NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHH----------TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEe
Confidence 47999998 999999999996 344 379999999 554432 33322233 2454433
Q ss_pred HHHHhcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhC-CCCcEEEEecChhh--HHHHHHc--C--C
Q 006034 468 AVLLSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAF-PAIPIYARAQDMMH--LLDLKKA--G--A 525 (663)
Q Consensus 468 ~~L~~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~-~~~~iia~~~~~~~--~~~l~~~--G--a 525 (663)
+-+++ .+++||.|+.+.+- | ..|.. ++..+++.+ |+.+++.. .||.+ ...+.+. | .
T Consensus 75 ~~~~~-al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~-SNPv~~~t~~~~~~~~~~p~ 152 (329)
T 1b8p_A 75 ADPMT-AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVV-GNPANTNAYIAMKSAPSLPA 152 (329)
T ss_dssp SSHHH-HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHHHHHHHHTCTTSCG
T ss_pred cCcHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEc-cCchHHHHHHHHHHcCCCCH
Confidence 33333 26789988776541 1 24554 445677775 88555544 46543 3344443 2 4
Q ss_pred CeEEcCchHHHHHHHHHHHHhcCCCHHHH
Q 006034 526 TDAILENAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 526 d~vi~p~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
++++.....-..++.+.+-+.+++++..+
T Consensus 153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v 181 (329)
T 1b8p_A 153 KNFTAMLRLDHNRALSQIAAKTGKPVSSI 181 (329)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHEEEeecHHHHHHHHHHHHHhCcCHHHc
Confidence 46777776656666666767777777444
No 171
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.92 E-value=0.069 Score=57.51 Aligned_cols=74 Identities=14% Similarity=0.250 Sum_probs=56.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHh----------c
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLS----------A 473 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~----------a 473 (663)
.+.-|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+...+. .++.-++.+++ .
T Consensus 12 ~~~~ViGlGyvGlp~A~~La----------~~G~~V~~~D~~~~kv~~L~~g~~pi--~epgl~~ll~~~~~~g~l~~tt 79 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFA----------KHGVDVLGVDINQQTIDKLQNGQISI--EEPGLQEVYEEVLSSGKLKVST 79 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTCCSS--CCTTHHHHHHHHHHTTCEEEES
T ss_pred CccEEEeeCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHCCCCCc--CCCCHHHHHHhhcccCceEEeC
Confidence 35789999999999999998 78999999999999999998744333 23333333332 1
Q ss_pred CCCCCcEEEEEcCCHH
Q 006034 474 GITSPKAVMIMYTDKK 489 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~ 489 (663)
.+++||.++++.+++.
T Consensus 80 d~~~aDvvii~VpTp~ 95 (431)
T 3ojo_A 80 TPEASDVFIIAVPTPN 95 (431)
T ss_dssp SCCCCSEEEECCCCCB
T ss_pred chhhCCEEEEEeCCCc
Confidence 3568999999987753
No 172
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.91 E-value=0.26 Score=50.76 Aligned_cols=136 Identities=20% Similarity=0.185 Sum_probs=82.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHH-HHh--cC----CC-EEEecCCCHHHHHhcC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKE-SRK--LG----FP-ILYGDASRPAVLLSAG 474 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~-~~~--~~----~~-vi~GD~~~~~~L~~a~ 474 (663)
+.+|.|+|.|.+|..++-.|.. .....+++++|.|+++.+. ..+ +. .+ -+.+| +. ..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~--------~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~--~~-----~a 69 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQ--------QGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG--EY-----SD 69 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHH--------HTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEEC--CG-----GG
T ss_pred CCEEEEECCCHHHHHHHHHHHc--------CCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEEC--CH-----HH
Confidence 4579999999999999998862 1122379999999988764 222 11 11 23332 22 23
Q ss_pred CCCCcEEEEEcCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-ch
Q 006034 475 ITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE-NA 533 (663)
Q Consensus 475 i~~a~~vv~~~~dd-----------~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p-~~ 533 (663)
+++||.||++.+-. ..|.. ++..+++.+|+..++. +.||.+. ..+ +..|.+ +|+-- ..
T Consensus 70 ~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~gt~ 148 (318)
T 1ez4_A 70 CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV-AANPVDILTYATWKFSGFPKERVIGSGTS 148 (318)
T ss_dssp GTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTTH
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-eCCcHHHHHHHHHHHcCCCHHHEEecccc
Confidence 68999888876432 24544 3445566689977666 5776543 233 333444 67655 44
Q ss_pred HHHHHHHHHHHHhcCCCHHHH
Q 006034 534 ETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 534 ~~~~~la~~~~~~~~~~~~~~ 554 (663)
.-..++-+.+-+.+++++..+
T Consensus 149 LD~~R~~~~la~~lgv~~~~v 169 (318)
T 1ez4_A 149 LDSSRLRVALGKQFNVDPRSV 169 (318)
T ss_dssp HHHHHHHHHHHHHHTCCGGGE
T ss_pred chHHHHHHHHHHHhCcChhHE
Confidence 444566666666667766443
No 173
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=93.88 E-value=0.4 Score=45.71 Aligned_cols=96 Identities=19% Similarity=0.166 Sum_probs=64.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc--------CCCEEEecCCCHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--------GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~--------~~~vi~GD~~~~~~L~~a 473 (663)
..++++-+|+|. |.......+ . +.+|+.+|.|++.++.+++. +..++.||..+. +..
T Consensus 55 ~~~~vLDlGcG~-G~~~~~la~----------~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~~- 119 (204)
T 3njr_A 55 RGELLWDIGGGS-GSVSVEWCL----------A-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--LAD- 119 (204)
T ss_dssp TTCEEEEETCTT-CHHHHHHHH----------T-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG--GTT-
T ss_pred CCCEEEEecCCC-CHHHHHHHH----------c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh--ccc-
Confidence 456899999987 665544443 3 78999999999998776642 466889998762 222
Q ss_pred CCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChh
Q 006034 474 GITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMM 515 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~ 515 (663)
.++.|.+++....+.. ......+.+.|+-.++....+.+
T Consensus 120 -~~~~D~v~~~~~~~~~--~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 120 -LPLPEAVFIGGGGSQA--LYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp -SCCCSEEEECSCCCHH--HHHHHHHHSCTTCEEEEEECSHH
T ss_pred -CCCCCEEEECCcccHH--HHHHHHHhcCCCcEEEEEecCcc
Confidence 3578988766544333 45555666777766666555443
No 174
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=93.87 E-value=0.48 Score=41.43 Aligned_cols=97 Identities=16% Similarity=0.231 Sum_probs=67.0
Q ss_pred CCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE
Q 006034 435 VGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~ 510 (663)
...++.++|.|+...+.+. +.|+.+..- .+-.+.++...-.+.|.+++-.-.+......+..+|+.+|+++++..
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~l 81 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEKDGFNVIWA-KNEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVL 81 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGGGTCEEEEE-SSHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCEEEEE-CCHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEE
Confidence 3467899999987755443 367776632 33455666666678898887762234556778888998998898887
Q ss_pred ecC--hhhHHHHHHcCCCeEEcCc
Q 006034 511 AQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 511 ~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
..+ .+......+.|++.++.-.
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP 105 (142)
T 2qxy_A 82 SAYVDKDLIINSVKAGAVDYILKP 105 (142)
T ss_dssp ESCCCHHHHHHHHHHTCSCEEESS
T ss_pred ECCCCHHHHHHHHHCCcceeEeCC
Confidence 665 4456677889998766543
No 175
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=93.85 E-value=0.084 Score=52.54 Aligned_cols=72 Identities=15% Similarity=0.087 Sum_probs=55.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc---CCCEEEecCCCHHHHHhcC-----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSAG----- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~---~~~vi~GD~~~~~~L~~a~----- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+. +..++.+|.+|++.++++=
T Consensus 13 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALD----------KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 46888876 678999999998 7899999999999887766542 5678899999998776541
Q ss_pred -CCCCcEEEEEc
Q 006034 475 -ITSPKAVMIMY 485 (663)
Q Consensus 475 -i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 83 ~~g~iD~lv~~A 94 (263)
T 3ak4_A 83 ALGGFDLLCANA 94 (263)
T ss_dssp HHTCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 12568776654
No 176
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=93.83 E-value=0.21 Score=52.30 Aligned_cols=109 Identities=22% Similarity=0.224 Sum_probs=72.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhcCCCEEEecCCCHH-HHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPA-VLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~~~~vi~GD~~~~~-~L~~a~i~~a~~v 481 (663)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+.+..+ .+|.+ .|++ .+.|+|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~---~~~D~V 69 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASA---------ADNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLAD---EKVDAV 69 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHT---------STTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHC---TTCCEE
T ss_pred CcEEEECcCHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcC---CCCCEE
Confidence 479999999999999999972 4577776 5599999988766666543 24444 4443 467999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHcCCCeEEcC
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 531 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~Gad~vi~p 531 (663)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|.-..+..
T Consensus 70 ~i~tp~~~h-~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (359)
T 3e18_A 70 LIATPNDSH-KELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ 123 (359)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EEcCCcHHH-HHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 999988643 34444554554 367763 4455554443 55677655543
No 177
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.83 E-value=0.36 Score=49.60 Aligned_cols=131 Identities=15% Similarity=0.214 Sum_probs=77.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH----hc------CCCEEEecCCCHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR----KL------GFPILYGDASRPAVLL 471 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~----~~------~~~vi~GD~~~~~~L~ 471 (663)
+.+|.|+|.|.+|..++..|. ..|+ +|+++|.|+++.+... +. ...+.. . +|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la----------~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t-~d~~--- 68 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG----------KDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-T-DDYA--- 68 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-E-SCGG---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-C-CCHH---
Confidence 357999999999999999997 5677 8999999998776531 10 122221 1 2222
Q ss_pred hcCCCCCcEEEEEcCC---------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHH-cC--CCeEEcC
Q 006034 472 SAGITSPKAVMIMYTD---------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AG--ATDAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~d---------d--~~n~----~~~~~~r~~~~~~~iia~~~~~~~~--~~l~~-~G--ad~vi~p 531 (663)
.+++||.|+.+.+- | .+|. .++..+++..|+. ++..+.|+.+. ..+.+ .| .++++-.
T Consensus 69 --a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~-iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 69 --DISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNA-FVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp --GGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred --HhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 35789999888721 1 2333 3455566667774 44445555543 23333 33 3467655
Q ss_pred c-hHHHHHHHHHHHHhcCCCH
Q 006034 532 N-AETSLQLGSKLLKGFGVMS 551 (663)
Q Consensus 532 ~-~~~~~~la~~~~~~~~~~~ 551 (663)
. .....+....+.+.+|.++
T Consensus 146 ~t~ld~~r~~~~la~~lg~~~ 166 (317)
T 2ewd_A 146 AGVLDSSRFRTFIAQHFGVNA 166 (317)
T ss_dssp CHHHHHHHHHHHHHHHHTSCG
T ss_pred cCcHHHHHHHHHHHHHhCcCh
Confidence 2 3333445555555555554
No 178
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.79 E-value=0.043 Score=55.99 Aligned_cols=44 Identities=20% Similarity=0.303 Sum_probs=38.0
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL 455 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~ 455 (663)
...++|-|+|.|.+|..+|+.| . .|++|++.|.+++..+.+.+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~l----------a-aG~~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAI----------A-SKHEVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHH----------H-TTSEEEEECSCHHHHHHHHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHH----------H-cCCEEEEEECCHHHHHHHHHH
Confidence 4567899999999999999999 3 789999999999998887765
No 179
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.79 E-value=0.28 Score=50.16 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=81.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHH---HHHHHhcCCCEEEecCCCHHHHHhcCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSV---VKESRKLGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~---~~~~~~~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
...+|.|+|.|.+|..++..+. ..+. +++++|.|++. +..+.+...+-+.+. +| + ..++
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~----------~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d---~--~~l~ 76 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAIS----------AKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KD---L--SASA 76 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SC---G--GGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CC---H--HHHC
Confidence 3467999999999999999886 4556 89999999852 223333222222221 23 2 2368
Q ss_pred CCcEEEEEcCC--------H--HHHH----HHHHHHHHhCCCCcEEEEecChhh--HHHHHH-cCC--CeEEcC-chHHH
Q 006034 477 SPKAVMIMYTD--------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMH--LLDLKK-AGA--TDAILE-NAETS 536 (663)
Q Consensus 477 ~a~~vv~~~~d--------d--~~n~----~~~~~~r~~~~~~~iia~~~~~~~--~~~l~~-~Ga--d~vi~p-~~~~~ 536 (663)
+||.||.+.+- | .+|. .++..+++..|+..++. +.|+.+ ...+++ .|. .+|+-- ..+-.
T Consensus 77 ~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~ 155 (303)
T 2i6t_A 77 HSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLV-ASQPVEIMTYVTWKLSTFPANRVIGIGCNLDS 155 (303)
T ss_dssp TCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTTHHHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-cCChHHHHHHHHHHhcCCCHHHeeCCCCCchH
Confidence 99988877521 1 2343 34555666678855444 666543 233333 343 367766 55555
Q ss_pred HHHHHHHHHhcCCCHHHHH
Q 006034 537 LQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 537 ~~la~~~~~~~~~~~~~~~ 555 (663)
.++...+-+.+++++..++
T Consensus 156 ~R~~~~la~~lgv~~~~v~ 174 (303)
T 2i6t_A 156 QRLQYIITNVLKAQTSGKE 174 (303)
T ss_dssp HHHHHHHHHTSCCTTGGGG
T ss_pred HHHHHHHHHHcCCChHHeE
Confidence 6777777777788775443
No 180
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.78 E-value=0.39 Score=49.59 Aligned_cols=134 Identities=15% Similarity=0.125 Sum_probs=79.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHH----HHhc-----CCCEEEecCCCHHHH
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL-----GFPILYGDASRPAVL 470 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~----~~~~-----~~~vi~GD~~~~~~L 470 (663)
...+|.|+|.|.+|..++..|. ..+. +++++|.++++++- +.+. ...+..+ +.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~----------~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~--- 71 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMV----------LQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY--- 71 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG---
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH---
Confidence 4568999999999999999986 3444 89999999987653 3221 1222222 22
Q ss_pred HhcCCCCCcEEEEEcCC---------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhHH--HH-HHcCC--CeEEc
Q 006034 471 LSAGITSPKAVMIMYTD---------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGA--TDAIL 530 (663)
Q Consensus 471 ~~a~i~~a~~vv~~~~d---------d--~~n~----~~~~~~r~~~~~~~iia~~~~~~~~~--~l-~~~Ga--d~vi~ 530 (663)
..+++||.||++.+. | +.|. .++..+++.+|+.. +..+.||.+.- .+ +..|. .+|+-
T Consensus 72 --~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~-ilvvtNPvdi~t~~~~k~~g~p~~rviG 148 (326)
T 3vku_A 72 --SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGI-FLVAANPVDILTYATWKLSGFPKNRVVG 148 (326)
T ss_dssp --GGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSE-EEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred --HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceE-EEEccCchHHHHHHHHHhcCCCHHHeee
Confidence 246789988877542 2 2354 34556677788855 55556665432 23 33343 35655
Q ss_pred C-chHHHHHHHHHHHHhcCCCHHHH
Q 006034 531 E-NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 531 p-~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
- ..+-..+.-..+-+.+++++..+
T Consensus 149 ~gt~LD~~R~~~~la~~lgv~~~~V 173 (326)
T 3vku_A 149 SGTSLDTARFRQSIAKMVNVDARSV 173 (326)
T ss_dssp CTTHHHHHHHHHHHHHHHTSCGGGE
T ss_pred ecccCcHHHHHHHHHHHhCCCHHHC
Confidence 4 44444455566666667776544
No 181
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=93.73 E-value=0.05 Score=54.55 Aligned_cols=73 Identities=18% Similarity=0.136 Sum_probs=57.2
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcC------C
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAG------I 475 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~------i 475 (663)
.+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+.....+.+|.+|++.++++- .
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFS----------EEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 456788876 679999999998 78999999999999887766667788999999988765431 1
Q ss_pred CCCcEEEEEc
Q 006034 476 TSPKAVMIMY 485 (663)
Q Consensus 476 ~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 86 g~iD~lvnnA 95 (266)
T 3p19_A 86 GPADAIVNNA 95 (266)
T ss_dssp CSEEEEEECC
T ss_pred CCCCEEEECC
Confidence 3567776544
No 182
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.71 E-value=0.47 Score=48.89 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=81.8
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHH----HHhc------CCCEEEecCCCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKE----SRKL------GFPILYGDASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~----~~~~------~~~vi~GD~~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. ..+. +++++|.|+++++. +.+. ... +.+. +|.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~----------~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t-~d~----- 68 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLAL----------IKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGT-NDY----- 68 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEE-SCG-----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEc-CCH-----
Confidence 57999999999999999996 4455 89999999987642 2221 223 3332 222
Q ss_pred cCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHH-HcCC--CeEEcCc
Q 006034 473 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLK-KAGA--TDAILEN 532 (663)
Q Consensus 473 a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~-~~Ga--d~vi~p~ 532 (663)
..+++||.||++.+- | ..|.. ++..+++.+|+..++.. .||.+. ..++ ..|. .+|+--.
T Consensus 69 ~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivv-tNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 69 KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI-TNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC-CSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEe-cCchHHHHHHHHHhcCCCHHHEEeec
Confidence 246789988887532 2 34544 44556777888665555 555433 2333 3354 3555544
Q ss_pred -hHHHHHHHHHHHHhcCCCHHHHH
Q 006034 533 -AETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 533 -~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
.+-..++-+.+-+.+++++..++
T Consensus 148 ~~LD~~R~~~~la~~l~v~~~~v~ 171 (321)
T 3p7m_A 148 GVLDSARFRTFLADELNVSVQQVQ 171 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cchHHHHHHHHHHHHhCcCHHHce
Confidence 33345556666666777775443
No 183
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.70 E-value=0.024 Score=60.25 Aligned_cols=98 Identities=15% Similarity=0.168 Sum_probs=66.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEec------------C----C
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD------------A----S 465 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD------------~----~ 465 (663)
...+|+|+|+|++|...++.+. ..|.+|++.|.++++.+.+.+.|..++.-+ . +
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~----------~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATAR----------RLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 3468999999999999999997 789999999999999888887665543211 1 1
Q ss_pred C------HHHHHhcCCCCCcEEEEEc--CC-HHHHHHHHHHHHHhCCCCcEEEE
Q 006034 466 R------PAVLLSAGITSPKAVMIMY--TD-KKRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 466 ~------~~~L~~a~i~~a~~vv~~~--~d-d~~n~~~~~~~r~~~~~~~iia~ 510 (663)
+ .+.+.+ -+.+||.+|.+. +. ....+..-..++.+.|..-|+-.
T Consensus 259 ~~~~~~~~~~l~e-~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 259 GEYQVKQAALVAE-HIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp CHHHHHHHHHHHH-HHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhhhhhhHhHHHH-HhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 2 234444 357899777653 22 22233445677778777334433
No 184
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.70 E-value=0.08 Score=54.64 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=67.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEE---ecC--------CCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY---GDA--------SRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~---GD~--------~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. +.|++|.++++++ . +.+++.|..+-. |+. +|+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~----------~~g~~V~~~~r~~-~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~---~~ 67 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA----------KTGHCVSVVSRSD-Y-ETVKAKGIRIRSATLGDYTFRPAAVVRSA---AE 67 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH----------HTTCEEEEECSTT-H-HHHHHHCEEEEETTTCCEEECCSCEESCG---GG
T ss_pred CEEEEECcCHHHHHHHHHHH----------hCCCeEEEEeCCh-H-HHHHhCCcEEeecCCCcEEEeeeeeECCH---HH
Confidence 46999999999999999997 6889999999987 2 666665543321 211 122 22
Q ss_pred cCCCCCcEEEEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHH-HcCCCeEE
Q 006034 473 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLK-KAGATDAI 529 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~~~~~l~-~~Gad~vi 529 (663)
+ .+++|.+++++.....- .+...++. +.++..++...|--.+.+.+. ..+.+.|+
T Consensus 68 ~-~~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 68 L-ETKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp C-SSCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEE
T ss_pred c-CCCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEE
Confidence 2 24899999998764321 22233333 345545666666555444443 34544443
No 185
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=93.70 E-value=0.087 Score=52.20 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=53.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------------cCCCEEEecCCCHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------------LGFPILYGDASRPAV 469 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------------~~~~vi~GD~~~~~~ 469 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++.
T Consensus 8 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 77 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLA----------GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA 77 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence 46888875 789999999998 789999999999988766543 246788999999987
Q ss_pred HHhc--CC----CCC-cEEEEEc
Q 006034 470 LLSA--GI----TSP-KAVMIMY 485 (663)
Q Consensus 470 L~~a--~i----~~a-~~vv~~~ 485 (663)
++++ .+ .+. |.+|-..
T Consensus 78 ~~~~~~~~~~~~g~i~d~vi~~A 100 (264)
T 2pd6_A 78 ARCLLEQVQACFSRPPSVVVSCA 100 (264)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCeEEEECC
Confidence 7653 11 233 7776554
No 186
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=93.68 E-value=0.13 Score=52.53 Aligned_cols=108 Identities=14% Similarity=0.103 Sum_probs=70.5
Q ss_pred CcEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
-++.|+|+|++|+. .++.|.+ ..+.+++ +.|.|+++.+.+.+ .+... .+|.+-+-+ +.|+
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~----~~D~ 69 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTK---------SERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAK----KCDC 69 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTS---------CSSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHT----TCSE
T ss_pred CcEEEEecCHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHh----cCCE
Confidence 47999999999996 8888862 4677877 78999999888765 45543 345554433 7899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|.-..+.-
T Consensus 70 V~i~tp~~~h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 70 IFLHSSTETH-YEIIKILLNLG--VHVYVDKPLASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp EEECCCGGGH-HHHHHHHHHTT--CEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEEeCCcHhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 9999998644 33444444444 256653 33433333 3355566554443
No 187
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.66 E-value=0.077 Score=53.76 Aligned_cols=124 Identities=8% Similarity=-0.080 Sum_probs=73.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhc-C--CCEEEecCCCHHHHHhcCCCCC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-G--FPILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~-~--~~vi~GD~~~~~~L~~a~i~~a 478 (663)
.++++|+|.|..|+.++..|. +.|. ++.+.++++++.+.+.+. + ..+-..+. ++.. +++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~----------~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~------~~l~-~~a 188 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLL----------DQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAF------EQLK-QSY 188 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCC-SCE
T ss_pred CCEEEEECchHHHHHHHHHHH----------hcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH------HHhc-CCC
Confidence 467999999999999999998 7885 899999999998877652 1 11222222 2222 689
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhh---HHHHHHcCCCeEEcCchHHHHHHHHHH
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMH---LLDLKKAGATDAILENAETSLQLGSKL 543 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~---~~~l~~~Gad~vi~p~~~~~~~la~~~ 543 (663)
|.+|.+|+....+-....-...+.|+.-++=.+.++.. .+..++.|+..+++-....-.|-+...
T Consensus 189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~~Gl~Mlv~Qa~~~f 256 (281)
T 3o8q_A 189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGMLVGQAAESF 256 (281)
T ss_dssp EEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHHHHHHHTTCSEEECTHHHHHHHHHHHH
T ss_pred CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHHHHHHHCCCCEEECcHHHHHHHHHHHH
Confidence 98888887642210000001112233223334455533 345567788767777654444444333
No 188
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=93.64 E-value=0.071 Score=56.85 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=57.8
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHHHHHHh----------cCCCEEEecCCCHHHH
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRK----------LGFPILYGDASRPAVL 470 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~~~~~~----------~~~~vi~GD~~~~~~L 470 (663)
.++++|.| .|.+|+.++++|. +.| ++|++++++++....+.+ .+..++.||.+|++.+
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~ 104 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIF----------KRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYD 104 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------TTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHH----------HCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHH
Confidence 35799999 5999999999998 678 799999999987655443 3578899999999987
Q ss_pred Hhc-CCCCCcEEEEEc
Q 006034 471 LSA-GITSPKAVMIMY 485 (663)
Q Consensus 471 ~~a-~i~~a~~vv~~~ 485 (663)
+.+ ...+.|.|+-+.
T Consensus 105 ~~~~~~~~~D~Vih~A 120 (399)
T 3nzo_A 105 AFIKADGQYDYVLNLS 120 (399)
T ss_dssp HHHHHCCCCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 764 335788877553
No 189
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.63 E-value=0.5 Score=48.77 Aligned_cols=135 Identities=19% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHH----HHHhc------CCCEEEecCCCHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVK----ESRKL------GFPILYGDASRPAVLL 471 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~----~~~~~------~~~vi~GD~~~~~~L~ 471 (663)
..+|.|+|.|.+|..++..|. ..+. +++++|.|+++++ .+.+. ...+ .+. +|.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~----------~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v-~~t-~d~---- 70 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAG----------LKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKF-TGA-NDY---- 70 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCE-EEE-SSG----
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEE-EEe-CCH----
Confidence 357999999999999999997 5566 8999999998764 22221 2333 321 122
Q ss_pred hcCCCCCcEEEEEcC---------CH--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCC--CeEEcC
Q 006034 472 SAGITSPKAVMIMYT---------DK--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGA--TDAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~---------dd--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Ga--d~vi~p 531 (663)
..+++||.||++.+ +| ..|.. ++..+++.+|+.. +..+.||.+. ..+ +..|. ++++--
T Consensus 71 -~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~-iivvtNPvd~~t~~~~k~sg~p~~rviG~ 148 (324)
T 3gvi_A 71 -AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAF-VICITNPLDAMVWALQKFSGLPAHKVVGM 148 (324)
T ss_dssp -GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCE-EEECCSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeE-EEecCCCcHHHHHHHHHhcCCCHHHEEee
Confidence 24678998888753 23 34544 4455667788854 4445555433 233 33455 356644
Q ss_pred c-hHHHHHHHHHHHHhcCCCHHHHH
Q 006034 532 N-AETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 532 ~-~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
- .+-..++-+.+-+.+++++..++
T Consensus 149 ~~~LD~~R~~~~la~~lgv~~~~v~ 173 (324)
T 3gvi_A 149 AGVLDSARFRYFLSEEFNVSVEDVT 173 (324)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cCccHHHHHHHHHHHHhCcCHHHCe
Confidence 4 33344555666666777775443
No 190
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.61 E-value=0.035 Score=57.09 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=50.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++.|+|+|++|+.+++.|. ..|.+|++.|++++. +...+.|.... +-++.+ +++|.++
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~~----~l~ell-----~~aDvV~ 201 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIAN----------ALGMNILLYDPYPNE-ERAKEVNGKFV----DLETLL-----KESDVVT 201 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCH-HHHHHTTCEEC----CHHHHH-----HHCSEEE
T ss_pred CceEEEEccCHHHHHHHHHHH----------HCCCEEEEECCCCCh-hhHhhcCcccc----CHHHHH-----hhCCEEE
Confidence 457999999999999999997 789999999999877 44555565321 222344 3689898
Q ss_pred EEcCCHH
Q 006034 483 IMYTDKK 489 (663)
Q Consensus 483 ~~~~dd~ 489 (663)
.+.+.++
T Consensus 202 l~~p~~~ 208 (307)
T 1wwk_A 202 IHVPLVE 208 (307)
T ss_dssp ECCCCST
T ss_pred EecCCCh
Confidence 8887654
No 191
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.58 E-value=0.35 Score=49.93 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=80.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCC-------CEEEEeCCh--HHHH----HHHhcCCCEEEecCCCHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGW-------PFVAFDLNP--SVVK----ESRKLGFPILYGDASRPAV 469 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~-------~vvvid~d~--~~~~----~~~~~~~~vi~GD~~~~~~ 469 (663)
.+|+|+|. |.+|+.++..|. +.|+ +++++|.++ ++.+ .+.+..+.++ +|.++.+-
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~----------~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIA----------AGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHH----------TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccC
Confidence 36999997 999999999997 4554 899999875 2222 2332233444 77766444
Q ss_pred HHhcCCCCCcEEEEEcCC---------H--HHHHHH----HHHHHHhC-CCCcEEEEecChh--hHHHHHHc--C--CCe
Q 006034 470 LLSAGITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAF-PAIPIYARAQDMM--HLLDLKKA--G--ATD 527 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~d---------d--~~n~~~----~~~~r~~~-~~~~iia~~~~~~--~~~~l~~~--G--ad~ 527 (663)
+.++ ++++|.|+.+... | +.|+.. +..+++.+ |+.+++. ..++. ......+. + ...
T Consensus 74 ~~~a-~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv-~snp~~~~~~~~~~~~~~~~p~~ 151 (327)
T 1y7t_A 74 PKVA-FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLV-VGNPANTNALIAYKNAPGLNPRN 151 (327)
T ss_dssp HHHH-TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHHHHHHHTCTTSCGGG
T ss_pred hHHH-hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE-eCCchhhhHHHHHHHcCCCChhh
Confidence 4433 4678988776431 1 346654 45567775 7755554 44444 22333332 1 234
Q ss_pred EEcCchHHHHHHHHHHHHhcCCCHHHH
Q 006034 528 AILENAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 528 vi~p~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
+..-....+.++.+.+-+.+++++..+
T Consensus 152 ~yg~tkl~~er~~~~~a~~~g~~~~~v 178 (327)
T 1y7t_A 152 FTAMTRLDHNRAKAQLAKKTGTGVDRI 178 (327)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred eeccchHHHHHHHHHHHHHhCcChhhe
Confidence 555555556666665555556665433
No 192
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=93.57 E-value=0.051 Score=56.47 Aligned_cols=67 Identities=18% Similarity=0.310 Sum_probs=50.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++.|+|+|++|+.+++.|. ..|.+|++.|+++++.+...+.+.... +-++.+ +++|.++
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~~----~l~e~l-----~~aDvVi 215 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLK----------PFGVQRFLYTGRQPRPEEAAEFQAEFV----STPELA-----AQSDFIV 215 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHG----------GGTCCEEEEESSSCCHHHHHTTTCEEC----CHHHHH-----HHCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HCCCEEEEECCCCcchhHHHhcCceeC----CHHHHH-----hhCCEEE
Confidence 457999999999999999997 789999999998876665555443321 223344 3678888
Q ss_pred EEcCCH
Q 006034 483 IMYTDK 488 (663)
Q Consensus 483 ~~~~dd 488 (663)
.+.+.+
T Consensus 216 ~~vp~~ 221 (330)
T 2gcg_A 216 VACSLT 221 (330)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 888764
No 193
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=93.52 E-value=0.08 Score=52.26 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=56.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc--CCCEEEecCCCHHHHHhcC------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAG------ 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~--~~~vi~GD~~~~~~L~~a~------ 474 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++|++++..+...+. ....+.+|.+|++.++++=
T Consensus 3 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFL----------EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 46888886 678999999998 7899999999999988877653 4558899999998776531
Q ss_pred CCCCcEEEEEc
Q 006034 475 ITSPKAVMIMY 485 (663)
Q Consensus 475 i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 73 ~g~id~lv~nA 83 (247)
T 3dii_A 73 LQRIDVLVNNA 83 (247)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 13667776554
No 194
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=93.51 E-value=0.12 Score=50.12 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=55.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc--CCC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA--GIT- 476 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a--~i~- 476 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ ....++.+|.+|++..+++ .+.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYD----------AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred CEEEEecCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh
Confidence 35888886 678999999998 789999999999999887765 3578899999999877653 222
Q ss_pred CCcEEEEEc
Q 006034 477 SPKAVMIMY 485 (663)
Q Consensus 477 ~a~~vv~~~ 485 (663)
..|.+|-..
T Consensus 72 ~~d~lv~~A 80 (230)
T 3guy_A 72 IPSTVVHSA 80 (230)
T ss_dssp CCSEEEECC
T ss_pred cCCEEEEeC
Confidence 237666544
No 195
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.49 E-value=0.49 Score=48.94 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=85.0
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHH----HHhc----CCCEEEecCCCHHHH
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL----GFPILYGDASRPAVL 470 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~----~~~~----~~~vi~GD~~~~~~L 470 (663)
....+|.|+|.|.+|..++..|. ..+. +++++|.++++++- +.+. ...-+.+. +|.+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~----------~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~-~d~~-- 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISIL----------MKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS-KDYS-- 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC-SSGG--
T ss_pred CCCCEEEEECCCHHHHHHHHHHH----------hCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc-CCHH--
Confidence 35578999999999999999886 4454 89999999987654 3321 12223321 2332
Q ss_pred HhcCCCCCcEEEEEcC---------CH--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCC--CeEEc
Q 006034 471 LSAGITSPKAVMIMYT---------DK--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGA--TDAIL 530 (663)
Q Consensus 471 ~~a~i~~a~~vv~~~~---------dd--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Ga--d~vi~ 530 (663)
.+++||.+|++.+ +| +.|.. ++..+++.+|+.. +..+.||.+. ..+ +..|. .+|+-
T Consensus 84 ---~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~-vlvvtNPvdi~t~~~~k~sg~p~~rviG 159 (331)
T 4aj2_A 84 ---VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCK-LLIVSNPVDILTYVAWKISGFPKNRVIG 159 (331)
T ss_dssp ---GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCE-EEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred ---HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeE-EEEecChHHHHHHHHHHHhCCCHHHEEe
Confidence 3789998877653 23 45654 3455667788854 4555566443 223 33455 34665
Q ss_pred C-chHHHHHHHHHHHHhcCCCHHHHH
Q 006034 531 E-NAETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 531 p-~~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
- ..+-..+.-..+-+.+++++..++
T Consensus 160 ~gt~LD~~R~~~~la~~lgv~~~~V~ 185 (331)
T 4aj2_A 160 SGCNLDSARFRYLMGERLGVHPLSCH 185 (331)
T ss_dssp CTTHHHHHHHHHHHHHHHTSCGGGCB
T ss_pred eccccHHHHHHHHHHHHhCCCHHHCE
Confidence 5 444455666666666777775544
No 196
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=93.47 E-value=0.23 Score=51.30 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=72.4
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHH-HHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPA-VLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~-~L~~a~i~~a~~ 480 (663)
-+|.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.. .+|.+ .+++ .+.|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~---~~~D~ 66 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG---------NADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAA---ADIDA 66 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHC---TTCCE
T ss_pred eEEEEECCCHHHHHHHHHHhh---------CCCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcC---CCCCE
Confidence 479999999999999999972 4677777 68999999888765 4544 24444 4442 46899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcCc
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILEN 532 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p~ 532 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|.-..+...
T Consensus 67 V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 122 (331)
T 4hkt_A 67 VVICTPTDTH-ADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN 122 (331)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred EEEeCCchhH-HHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc
Confidence 9999987643 44444555554 356652 34444443 34666776665543
No 197
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.46 E-value=0.081 Score=52.88 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=54.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-----CCCEEEecCCCHHHHHhcC---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-----GFPILYGDASRPAVLLSAG--- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-----~~~vi~GD~~~~~~L~~a~--- 474 (663)
++++|.|. |.+|+.+++.|. ++|++|++++++++..+...+. +..++.+|.+|++.++++-
T Consensus 17 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFV----------RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 46788875 789999999998 7899999999998876554431 4678899999998876541
Q ss_pred ---CCCCcEEEEEc
Q 006034 475 ---ITSPKAVMIMY 485 (663)
Q Consensus 475 ---i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 87 ~~~~~~id~li~~A 100 (278)
T 2bgk_A 87 IAKHGKLDIMFGNV 100 (278)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678776443
No 198
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.46 E-value=0.075 Score=52.36 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a~-- 474 (663)
++++|.|. |.+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++.++++-
T Consensus 12 ~~vlVtGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFA----------TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence 46777776 789999999998 789999999999887654432 23567889999998876541
Q ss_pred ----CCCCcEEEEEc
Q 006034 475 ----ITSPKAVMIMY 485 (663)
Q Consensus 475 ----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 82 ~~~~~~~~d~vi~~A 96 (255)
T 1fmc_A 82 AISKLGKVDILVNNA 96 (255)
T ss_dssp HHHHHSSCCEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 13678776654
No 199
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.44 E-value=0.099 Score=53.37 Aligned_cols=35 Identities=31% Similarity=0.656 Sum_probs=31.7
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS 447 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~ 447 (663)
.++|.|+| .|.+|..+++.|. +.|++|.++|++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~----------~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLR----------ASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHH----------TTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHH----------hCCCeEEEEECCcc
Confidence 35799999 9999999999998 78999999999876
No 200
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.38 E-value=0.086 Score=55.94 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=73.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|.|+.|+.+++.++ +.|++|+++|.+++.- ........+.+|..|.+.+.+.. +++|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~----------~~G~~vi~~d~~~~~~--~~~~ad~~~~~~~~d~~~l~~~~-~~~dvI 79 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAK----------EMGYKIAVLDPTKNSP--CAQVADIEIVASYDDLKAIQHLA-EISDVV 79 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSTTCT--TTTTCSEEEECCTTCHHHHHHHH-HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HcCCEEEEEeCCCCCc--hHHhCCceEecCcCCHHHHHHHH-HhCCEe
Confidence 3458999999999999999998 7999999999887531 11122346678899988776654 457865
Q ss_pred EEEcCCHHHHHHHHHHHHHh---CCCCcEEEEecChhh-HHHHHHcCCCe
Q 006034 482 MIMYTDKKRTIEAVQRLRLA---FPAIPIYARAQDMMH-LLDLKKAGATD 527 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~---~~~~~iia~~~~~~~-~~~l~~~Gad~ 527 (663)
....++ .+...+..+.+. +|+...+..+.|... .+.++++|+..
T Consensus 80 ~~~~e~--~~~~~~~~l~~~g~~~~~~~~~~~~~dK~~~k~~l~~~Gip~ 127 (389)
T 3q2o_A 80 TYEFEN--IDYRCLQWLEKHAYLPQGSQLLSKTQNRFTEKNAIEKAGLPV 127 (389)
T ss_dssp EESCCC--CCHHHHHHHHHHSCCTTCSHHHHHTTSHHHHHHHHHHTTCCC
T ss_pred eecccc--ccHHHHHHHHhhCccCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 333332 333334444433 445456666666654 44778888753
No 201
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.37 E-value=0.061 Score=54.21 Aligned_cols=113 Identities=14% Similarity=-0.029 Sum_probs=66.7
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CC--CEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF--PILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~--~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++++|+|.|..|+.++..|. +.|.+|++.++++++.+.+.+. +. .+...|. +.+. . .++|
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~----------~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~--~-~~~D 182 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLL----------QAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP--L-QTYD 182 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHH----------HTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC--C-SCCS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc--c-CCCC
Confidence 457999999999999999997 6779999999999998877642 11 2222222 1111 1 4899
Q ss_pred EEEEEcCCHHH-HHHHHHHHHHhCCCCcEEEEecChhh----HHHHHHcCCCeEEcCc
Q 006034 480 AVMIMYTDKKR-TIEAVQRLRLAFPAIPIYARAQDMMH----LLDLKKAGATDAILEN 532 (663)
Q Consensus 480 ~vv~~~~dd~~-n~~~~~~~r~~~~~~~iia~~~~~~~----~~~l~~~Gad~vi~p~ 532 (663)
.+|.+++.... +..-. -...+.++..++=...++.. .+..++.|+..+++--
T Consensus 183 ivIn~t~~~~~~~~~~i-~~~~l~~~~~v~D~~y~p~~~t~ll~~a~~~G~~~~v~G~ 239 (272)
T 1p77_A 183 LVINATSAGLSGGTASV-DAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGF 239 (272)
T ss_dssp EEEECCCC-------CC-CHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSH
T ss_pred EEEECCCCCCCCCCCCC-CHHHcCCCCEEEEeeCCCCcCCHHHHHHHHcCCCEeeCCH
Confidence 99988887532 11000 00011123234444444433 4455677886566643
No 202
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=93.36 E-value=0.2 Score=52.06 Aligned_cols=112 Identities=17% Similarity=0.192 Sum_probs=69.2
Q ss_pred CCcEEEEcCCcchHHHHHHhc-ccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLS-APLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~-~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
+-+|.|+|+|++|+..++.|. + ..+.+++ +.|.|+++.+.+.+ .+....+.| -++.+++ .++|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~---------~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~--~~~~l~~---~~~D 73 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNK---------IQGVKLVAACALDSNQLEWAKNELGVETTYTN--YKDMIDT---ENID 73 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHT---------CSSEEEEEEECSCHHHHHHHHHTTCCSEEESC--HHHHHTT---SCCS
T ss_pred cceEEEEcCCHHHHHHHHHHHhc---------CCCcEEEEEecCCHHHHHHHHHHhCCCcccCC--HHHHhcC---CCCC
Confidence 347999999999999999885 2 4566754 67999999887765 455434433 2334432 4789
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHc-CCCeEEcC
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKA-GATDAILE 531 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~-Gad~vi~p 531 (663)
+|+++++++.. ...+..+-+.+ .++++. +.+.+..+.+ ++. |....+..
T Consensus 74 ~V~i~tp~~~h-~~~~~~al~~G--~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~ 130 (346)
T 3cea_A 74 AIFIVAPTPFH-PEMTIYAMNAG--LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGF 130 (346)
T ss_dssp EEEECSCGGGH-HHHHHHHHHTT--CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCC
T ss_pred EEEEeCChHhH-HHHHHHHHHCC--CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEec
Confidence 99999987643 33344443443 356652 2344443333 455 76655443
No 203
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.36 E-value=0.6 Score=48.24 Aligned_cols=137 Identities=13% Similarity=0.134 Sum_probs=82.8
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHH-Hh--cC----CC-EEEecCCCHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES-RK--LG----FP-ILYGDASRPAVLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~-~~--~~----~~-vi~GD~~~~~~L~~a 473 (663)
.+.+|.|+|.|.+|..++-.|.. .....+++++|.|+++.+.. .+ +. .+ -+.+| +.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~--------~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~--~~~----- 72 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVL--------QGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSA--EYS----- 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--------HTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC--CGG-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHc--------CCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEEC--CHH-----
Confidence 44689999999999999998861 11223799999999886542 22 11 11 23332 222
Q ss_pred CCCCCcEEEEEcCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-c
Q 006034 474 GITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE-N 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd-----------~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p-~ 532 (663)
.+++||.||++.+-. ..|.. ++..+++.+|+..++. +.||.+. ..+ +..|.+ +|+-- .
T Consensus 73 a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV-AANPVDILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp GGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTT
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-eCCcHHHHHHHHHHHcCCCHHHEEEccc
Confidence 267899888776431 13443 3445566789977666 5776543 233 333443 67655 4
Q ss_pred hHHHHHHHHHHHHhcCCCHHHH
Q 006034 533 AETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~~~~ 554 (663)
..-..++-..+-+.+++++..+
T Consensus 152 ~LD~~R~~~~la~~lgv~~~~v 173 (326)
T 2zqz_A 152 SLDTARFRQSIAEMVNVDARSV 173 (326)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGE
T ss_pred cchHHHHHHHHHHHhCCChhhe
Confidence 4444566666666667766443
No 204
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.36 E-value=0.12 Score=55.66 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=51.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEE-----------e--c-CCCHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY-----------G--D-ASRPA 468 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~-----------G--D-~~~~~ 468 (663)
..+|.|+|.|.+|..+|..|. + |++|+++|.|+++++.+.+...+... + . .+|.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La----------~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ 104 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIA----------Q-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKH 104 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CCEEEEECcCHHHHHHHHHHH----------c-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHH
Confidence 347999999999999999997 6 99999999999999988763222110 0 0 12211
Q ss_pred HHHhcCCCCCcEEEEEcCCH
Q 006034 469 VLLSAGITSPKAVMIMYTDK 488 (663)
Q Consensus 469 ~L~~a~i~~a~~vv~~~~dd 488 (663)
..+++||.++++++++
T Consensus 105 ----ea~~~aDvViiaVPt~ 120 (432)
T 3pid_A 105 ----DAYRNADYVIIATPTD 120 (432)
T ss_dssp ----HHHTTCSEEEECCCCE
T ss_pred ----HHHhCCCEEEEeCCCc
Confidence 1246789999998875
No 205
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.35 E-value=0.089 Score=52.30 Aligned_cols=72 Identities=15% Similarity=0.084 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------c-CCCEEEecCCCHHHHHhcC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------L-GFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~-~~~vi~GD~~~~~~L~~a~ 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELA----------RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF 77 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHH
Confidence 46788876 789999999998 789999999999987665432 1 4667889999998776531
Q ss_pred ------CCCCcEEEEEcC
Q 006034 475 ------ITSPKAVMIMYT 486 (663)
Q Consensus 475 ------i~~a~~vv~~~~ 486 (663)
.. .|.+|-..+
T Consensus 78 ~~~~~~~g-id~lv~~Ag 94 (260)
T 2z1n_A 78 EKARDLGG-ADILVYSTG 94 (260)
T ss_dssp HHHHHTTC-CSEEEECCC
T ss_pred HHHHHhcC-CCEEEECCC
Confidence 12 677766543
No 206
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.32 E-value=0.13 Score=53.25 Aligned_cols=90 Identities=18% Similarity=0.168 Sum_probs=63.7
Q ss_pred CCcEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEEEEeCCh--HHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vvvid~d~--~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.+|+.++|.|..|.. +|+.|. ++|++|.+.|.++ +..+.+++.|..+..|. +++-+.+ .++|
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~----------~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~l~~---~~~d 68 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAK----------EAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQLDE---FKAD 68 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHH----------HTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGGGGS---CCCS
T ss_pred CcEEEEEEECHHHHHHHHHHHH----------hCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHHcCC---CCCC
Confidence 468999999999996 899887 8999999999865 35667888899988873 4443321 3688
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~ 510 (663)
.||....=+.+|-. ...||+.+ ++++.+
T Consensus 69 ~vV~Spgi~~~~p~-~~~a~~~g--i~v~~~ 96 (326)
T 3eag_A 69 VYVIGNVAKRGMDV-VEAILNLG--LPYISG 96 (326)
T ss_dssp EEEECTTCCTTCHH-HHHHHHTT--CCEEEH
T ss_pred EEEECCCcCCCCHH-HHHHHHcC--CcEEeH
Confidence 77765543334443 44567765 456655
No 207
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=93.32 E-value=0.15 Score=53.20 Aligned_cols=110 Identities=15% Similarity=-0.012 Sum_probs=72.6
Q ss_pred CcEEEEcCCcchH-HHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~-~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
-+|.|+|+|.+|+ ..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.+.+ .| -++.+++ .+.|+
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~~--~~~ll~~---~~~D~ 92 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEA---------EPLTEVTAIASRRWDRAKRFTERFGGEPV-EG--YPALLER---DDVDA 92 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHH---------CTTEEEEEEEESSHHHHHHHHHHHCSEEE-ES--HHHHHTC---TTCSE
T ss_pred eEEEEEcCcHHHHHHHHHHHHh---------CCCeEEEEEEcCCHHHHHHHHHHcCCCCc-CC--HHHHhcC---CCCCE
Confidence 4799999999998 78888872 4577776 66999999888765 466654 22 2344433 57899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+ ..++.|.-..+..
T Consensus 93 V~i~tp~~~h-~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 93 VYVPLPAVLH-AEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp EEECCCGGGH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEECCCcHHH-HHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 9999988643 44455555554 357763 44544443 3456677665543
No 208
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.29 E-value=0.1 Score=53.90 Aligned_cols=72 Identities=19% Similarity=0.129 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh----------HHHHHHHh---cCCCEEEecCCCHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----------SVVKESRK---LGFPILYGDASRPAV 469 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~----------~~~~~~~~---~~~~vi~GD~~~~~~ 469 (663)
++++|.|. |-+|+.+++.|. +.|++|+++++++ +..+.+.+ .+..++.+|.+|++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~ 72 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELL----------EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGA 72 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHH
Confidence 57899985 999999999997 6799999998743 33444432 467889999999988
Q ss_pred HHhcCCC--CCcEEEEEcC
Q 006034 470 LLSAGIT--SPKAVMIMYT 486 (663)
Q Consensus 470 L~~a~i~--~a~~vv~~~~ 486 (663)
++++ ++ +.|.||-+..
T Consensus 73 ~~~~-~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 73 LQRL-FKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHH-HHHCCEEEEEECCS
T ss_pred HHHH-HHhcCCCEEEECCC
Confidence 7654 22 6788876654
No 209
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=93.27 E-value=0.066 Score=52.79 Aligned_cols=72 Identities=17% Similarity=0.199 Sum_probs=55.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhc--CCCCCc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSA--GITSPK 479 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a--~i~~a~ 479 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+. +..++.+|.+|++.++++ ...+.|
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFA----------REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45777776 789999999998 7899999999999877655432 467789999999887654 245778
Q ss_pred EEEEEc
Q 006034 480 AVMIMY 485 (663)
Q Consensus 480 ~vv~~~ 485 (663)
.+|-..
T Consensus 77 ~lv~~A 82 (246)
T 2ag5_A 77 VLFNVA 82 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777543
No 210
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.27 E-value=0.81 Score=47.22 Aligned_cols=137 Identities=14% Similarity=0.041 Sum_probs=83.0
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHH----Hhc----CCCEEEecCCCHHHHH
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKES----RKL----GFPILYGDASRPAVLL 471 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~----~~~----~~~vi~GD~~~~~~L~ 471 (663)
..++|.|+|.|.+|..++..|. ..+. +++++|.++++++.. .+. ...-+.+. +| ++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la----------~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-~d---~~ 85 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL----------MKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-KD---YS 85 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH----------HHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-SS---SC
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-CC---HH
Confidence 4578999999999999999886 4454 899999999875442 221 12223321 22 21
Q ss_pred hcCCCCCcEEEEEcC---------CH--HHHHHHH----HHHHHhCCCCcEEEEecChhhHH--H-HHHcCC--CeEEcC
Q 006034 472 SAGITSPKAVMIMYT---------DK--KRTIEAV----QRLRLAFPAIPIYARAQDMMHLL--D-LKKAGA--TDAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~---------dd--~~n~~~~----~~~r~~~~~~~iia~~~~~~~~~--~-l~~~Ga--d~vi~p 531 (663)
.+++||.||++.+ +| ..|..+. ..+++.+|+.. +..+.||.+.- . .+..|. ++|+--
T Consensus 86 --~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~-ilvvtNPvdi~t~~~~k~sg~p~~rViG~ 162 (330)
T 3ldh_A 86 --VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCL-KELHPELGTDKNKQDWKLSGLPMHRIIGS 162 (330)
T ss_dssp --SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCE-EEECSSSHHHHHHHHHHHHCCCGGGEECC
T ss_pred --HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCce-EEeCCCccHHHHHHHHHHhCCCHHHeecc
Confidence 3789998887642 23 5665543 45666788854 45555664432 2 233453 345544
Q ss_pred -chHHHHHHHHHHHHhcCCCHHHHH
Q 006034 532 -NAETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 532 -~~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
..+-..++...+-+.+++++..++
T Consensus 163 gt~LDs~R~~~~lA~~lgv~~~~V~ 187 (330)
T 3ldh_A 163 GCNLDSARFRYLMGERLGVHSCLVI 187 (330)
T ss_dssp TTHHHHHHHHHHHHHHHTSCTTTCC
T ss_pred cCchhHHHHHHHHHHHhCCCHHHeE
Confidence 333445566666666677764443
No 211
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.22 E-value=0.047 Score=57.22 Aligned_cols=84 Identities=13% Similarity=0.169 Sum_probs=58.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.|. ..|.+|++.|+++...+...+.+.... .+.+-+ ++++|.|+
T Consensus 164 gktvGIIG~G~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~el----l~~aDvV~ 225 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLK----------PFGCNLLYHDRLQMAPELEKETGAKFV----EDLNEM----LPKCDVIV 225 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHG----------GGCCEEEEECSSCCCHHHHHHHCCEEC----SCHHHH----GGGCSEEE
T ss_pred CCEEeEEEeCHHHHHHHHHHH----------HCCCEEEEeCCCccCHHHHHhCCCeEc----CCHHHH----HhcCCEEE
Confidence 457999999999999999997 789999999998766665555554321 222222 35689888
Q ss_pred EEcCCHH--HHHHHHHHHHHhCCC
Q 006034 483 IMYTDKK--RTIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~--~n~~~~~~~r~~~~~ 504 (663)
+.++..+ .++.-....+.+.|+
T Consensus 226 l~~Plt~~t~~li~~~~l~~mk~g 249 (351)
T 3jtm_A 226 INMPLTEKTRGMFNKELIGKLKKG 249 (351)
T ss_dssp ECSCCCTTTTTCBSHHHHHHSCTT
T ss_pred ECCCCCHHHHHhhcHHHHhcCCCC
Confidence 8887542 233334556666666
No 212
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.21 E-value=0.08 Score=54.58 Aligned_cols=73 Identities=16% Similarity=0.051 Sum_probs=54.9
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHH----HHH---hcCCCEEEecCCCHHHHHhcC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK----ESR---KLGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~----~~~---~~~~~vi~GD~~~~~~L~~a~ 474 (663)
.++++|.|. |-+|+.+++.|. +.|++|++++++++..+ .+. ..+..++.+|.+|++.++++=
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELL----------AHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIF 74 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHH
T ss_pred CcEEEEecCCcHHHHHHHHHHH----------HCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHH
Confidence 457999985 999999999998 78999999998765432 222 246788999999999887641
Q ss_pred C-CCCcEEEEEc
Q 006034 475 I-TSPKAVMIMY 485 (663)
Q Consensus 475 i-~~a~~vv~~~ 485 (663)
- .+.|.+|-+.
T Consensus 75 ~~~~~d~vih~A 86 (341)
T 3enk_A 75 DAHPITAAIHFA 86 (341)
T ss_dssp HHSCCCEEEECC
T ss_pred hccCCcEEEECc
Confidence 1 2678777554
No 213
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.17 E-value=0.099 Score=51.68 Aligned_cols=72 Identities=11% Similarity=0.115 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH----h--cCCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----K--LGFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~----~--~~~~vi~GD~~~~~~L~~a~-- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+... + ....++.+|.+|++.++++=
T Consensus 14 k~vlItGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALA----------EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 56788876 789999999998 78999999999988755433 2 23667899999998776531
Q ss_pred ----CCCCcEEEEEc
Q 006034 475 ----ITSPKAVMIMY 485 (663)
Q Consensus 475 ----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 84 ~~~~~~~id~vi~~A 98 (260)
T 3awd_A 84 VHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13578776554
No 214
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.17 E-value=0.13 Score=51.06 Aligned_cols=74 Identities=9% Similarity=0.009 Sum_probs=54.0
Q ss_pred CCCCcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH---HHHHh--cCCCEEEecCCCHHHHHh
Q 006034 401 EGSEPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV---KESRK--LGFPILYGDASRPAVLLS 472 (663)
Q Consensus 401 ~~~~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~---~~~~~--~~~~vi~GD~~~~~~L~~ 472 (663)
...++++|.|. +-+|+.+++.|. ++|++|++++++++.. +.+.+ ....++.+|.+|++-.++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 81 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACK----------REGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDA 81 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH----------HcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHH
Confidence 35567888886 489999999998 7899999998885443 33322 247889999999987654
Q ss_pred c------CCCCCcEEEEE
Q 006034 473 A------GITSPKAVMIM 484 (663)
Q Consensus 473 a------~i~~a~~vv~~ 484 (663)
+ ...+.|.+|-.
T Consensus 82 ~~~~~~~~~g~id~lv~n 99 (271)
T 3ek2_A 82 LFASLKTHWDSLDGLVHS 99 (271)
T ss_dssp HHHHHHHHCSCEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEC
Confidence 3 12356777654
No 215
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.16 E-value=0.031 Score=60.17 Aligned_cols=110 Identities=19% Similarity=0.164 Sum_probs=74.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH-HHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV-KESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~-~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
..+++.|+|.|+.|+.+++.++ +.|++|+++|.+++.- .... ...+.+|.+|.+.+.+.- +++|.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~----------~lG~~v~v~d~~~~~p~~~~a---d~~~~~~~~d~~~l~~~a-~~~D~ 99 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQ----------SMGYRVAVLDPDPASPAGAVA---DRHLRAAYDDEAALAELA-GLCEA 99 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCTTCHHHHHS---SEEECCCTTCHHHHHHHH-HHCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCCcCchhhhC---CEEEECCcCCHHHHHHHH-hcCCE
Confidence 4568999999999999999997 7999999999887642 2222 346678999999887765 78897
Q ss_pred EEEEcCCHHHHHHHHHHHHHh---CCCCcEEEEecChh-hHHHHHHcCCCe
Q 006034 481 VMIMYTDKKRTIEAVQRLRLA---FPAIPIYARAQDMM-HLLDLKKAGATD 527 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~---~~~~~iia~~~~~~-~~~~l~~~Gad~ 527 (663)
++...++ .+...+..+.+. +|+...+..+.|.. ..+.+++.|+..
T Consensus 100 V~~~~e~--~~~~~~~~l~~~~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~ 148 (419)
T 4e4t_A 100 VSTEFEN--VPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPV 148 (419)
T ss_dssp EEECCTT--CCHHHHHHHHTTSEESSCHHHHHHHTCHHHHHHHHHHTTCCB
T ss_pred EEEccCc--CCHHHHHHHHccCCcCCCHHHHHHhcCHHHHHHHHHHcCcCC
Confidence 7643332 333333333332 34444555555554 444677888763
No 216
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.16 E-value=0.12 Score=53.25 Aligned_cols=119 Identities=8% Similarity=0.002 Sum_probs=73.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCC---hHHHHHHHh-----cCCCEEEecCCCHHHHHhc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN---PSVVKESRK-----LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d---~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a 473 (663)
.++++|+|.|..|+.++..|. +.|. +|++++++ +++++.+.+ .+..+-..+..+.+-|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~----------~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~- 222 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAA----------LDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK- 222 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHH----------HCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh-
Confidence 468999999999999999998 6787 89999999 888777653 233444556666555543
Q ss_pred CCCCCcEEEEEcCCHHH-H--HHHHHHHHHhCCCCcEEEEecChhhHH---HHHHcCCCeEEcCch
Q 006034 474 GITSPKAVMIMYTDKKR-T--IEAVQRLRLAFPAIPIYARAQDMMHLL---DLKKAGATDAILENA 533 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~-n--~~~~~~~r~~~~~~~iia~~~~~~~~~---~l~~~Gad~vi~p~~ 533 (663)
.+.++|.||-+|+-... + ..-......+.++.-++=.+.++...+ ..++.|+ .+++--.
T Consensus 223 ~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~-~~~~Gl~ 287 (315)
T 3tnl_A 223 EIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGC-QTLNGLG 287 (315)
T ss_dssp HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHHHHHTTC-EEECSHH
T ss_pred hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHHHHHCCC-eEeCcHH
Confidence 25678988888763100 0 000000112233323444566665444 4466787 5666553
No 217
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.15 E-value=0.12 Score=52.23 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=57.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc---CCCEEEecCCCHHHHHhc--CCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA--GIT 476 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~---~~~vi~GD~~~~~~L~~a--~i~ 476 (663)
.+.++|.|. |-+|+.+++.|. ++|++|+++++|+++.+...+. ...++.+|.+|++.++++ .+.
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 85 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELA----------RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVS 85 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred CCEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence 346777776 679999999998 7899999999999998877653 467889999999987664 345
Q ss_pred CCcEEEEEc
Q 006034 477 SPKAVMIMY 485 (663)
Q Consensus 477 ~a~~vv~~~ 485 (663)
+.|.+|-..
T Consensus 86 ~iD~lv~nA 94 (291)
T 3rd5_A 86 GADVLINNA 94 (291)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 678776544
No 218
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=93.14 E-value=0.082 Score=51.98 Aligned_cols=72 Identities=13% Similarity=0.059 Sum_probs=54.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----cCCCEEEecCCCHHHHHhc----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSA---- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a---- 473 (663)
++++|.|. |.+|+.+++.|. +.|++|++++++++..+...+ ....++.+|.+|++.++++
T Consensus 7 k~vlVtGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFV----------EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHH
Confidence 45777775 789999999998 789999999999987765543 3467889999999877643
Q ss_pred --CCCCCcEEEEEc
Q 006034 474 --GITSPKAVMIMY 485 (663)
Q Consensus 474 --~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~~~~~id~li~~A 90 (251)
T 1zk4_A 77 EKAFGPVSTLVNNA 90 (251)
T ss_dssp HHHHSSCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 123578776654
No 219
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.14 E-value=0.047 Score=57.87 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=62.1
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
..++++|+|+|++|+.+++.+. ..|.+|++.|+++++.+.+.+ .+..+.. +..+.+.+.+. +.++|.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~----------~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~-~~~~~~~l~~~-l~~aDv 234 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIAN----------GMGATVTVLDINIDKLRQLDAEFCGRIHT-RYSSAYELEGA-VKRADL 234 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTTTSSEE-EECCHHHHHHH-HHHCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHhcCCeeEe-ccCCHHHHHHH-HcCCCE
Confidence 3468999999999999999997 788999999999999887766 4544221 22333334332 347898
Q ss_pred EEEEcCCHHH---HHHHHHHHHHhCCCCcEEE
Q 006034 481 VMIMYTDKKR---TIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 481 vv~~~~dd~~---n~~~~~~~r~~~~~~~iia 509 (663)
++.++..+.. ++......+.+.|...++-
T Consensus 235 Vi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 235 VIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp EEECCCCTTSCCCCCBCHHHHTTSCTTCEEEE
T ss_pred EEECCCcCCCCCcceecHHHHhcCCCCcEEEE
Confidence 8887654321 1112233455555534443
No 220
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.12 E-value=0.1 Score=52.33 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=55.0
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhc--
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a-- 473 (663)
.++++|.|. |.+|+.+++.|. +.|++|++++++++..+.+.+ ....++.+|.+|++.++++
T Consensus 31 ~k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 100 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFA----------KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK 100 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH----------HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHH
Confidence 356888875 789999999998 789999999999987665432 2456788999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 101 ~~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 101 KVKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHHTCCCSEEEECC
T ss_pred HHHHHCCCCcEEEECC
Confidence 124678777654
No 221
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=93.11 E-value=0.84 Score=39.61 Aligned_cols=97 Identities=15% Similarity=0.007 Sum_probs=66.0
Q ss_pred CCCCEEEEeCChHHHHHHHh----cCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-H--HHHHHHHHHHHHhCCCCcE
Q 006034 435 VGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-K--KRTIEAVQRLRLAFPAIPI 507 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~~----~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d--~~n~~~~~~~r~~~~~~~i 507 (663)
...++.++|.|+...+.+.+ .|+.+..-+ +-.+.++...-.+.|.+++-.+- + ..-...+..+|+.+|++++
T Consensus 5 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~i 83 (136)
T 3kto_A 5 HHPIIYLVDHQKDARAALSKLLSPLDVTIQCFA-SAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPT 83 (136)
T ss_dssp --CEEEEECSCHHHHHHHHHHHTTSSSEEEEES-SHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCcEEEEeC-CHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCE
Confidence 34678899999887655443 567666432 33456666666678877776553 2 3556788889999999898
Q ss_pred EEEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 508 YARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 508 ia~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
+...... +......+.|++.++...
T Consensus 84 i~~s~~~~~~~~~~~~~~ga~~~l~KP 110 (136)
T 3kto_A 84 IVMASSSDIPTAVRAMRASAADFIEKP 110 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEEEcCCCHHHHHHHHHcChHHheeCC
Confidence 8776644 446677889999877654
No 222
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.11 E-value=0.18 Score=52.00 Aligned_cols=134 Identities=17% Similarity=0.224 Sum_probs=80.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHH-HHh--cCC----CE-EEecCCCHHHHHh
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE-SRK--LGF----PI-LYGDASRPAVLLS 472 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~-~~~--~~~----~v-i~GD~~~~~~L~~ 472 (663)
+.+|.|+|.|.+|..++-.|. ..+. +++++|.|+++++. ..+ +.. ++ +.. ++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~----------~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~~----- 69 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMA----------LRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GDY----- 69 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHH----------HTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CG-----
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CCH-----
Confidence 357999999999999999987 4455 89999999987432 222 111 11 221 222
Q ss_pred cCCCCCcEEEEEcCCH-----------HHHH----HHHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-
Q 006034 473 AGITSPKAVMIMYTDK-----------KRTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE- 531 (663)
Q Consensus 473 a~i~~a~~vv~~~~dd-----------~~n~----~~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p- 531 (663)
..+++||.||++.+-. ..|. .++..+++.+|+..++. ..||-+. ..+ +..|.+ +|+--
T Consensus 70 ~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~~~k~s~~p~~rviG~g 148 (318)
T 1y6j_A 70 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV-VSNPVDIITYMIQKWSGLPVGKVIGSG 148 (318)
T ss_dssp GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE-CSSSHHHHHHHHHHHHTCCTTTEEECT
T ss_pred HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHcCCCHHHEeccC
Confidence 2378999888876532 2343 35556667788876666 5666433 223 333443 67755
Q ss_pred chHHHHHHHHHHHHhcCCCHHHH
Q 006034 532 NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 532 ~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
...-..++.+.+-+.+++++..+
T Consensus 149 t~Ld~~r~~~~la~~lgv~~~~v 171 (318)
T 1y6j_A 149 TVLDSIRFRYLLSEKLGVDVKNV 171 (318)
T ss_dssp THHHHHHHHHHHHTTTTCCTTTE
T ss_pred CchHHHHHHHHHHHHhCCCHHHe
Confidence 54445566666667777776443
No 223
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=93.08 E-value=0.088 Score=51.62 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=55.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ .+..++.+|.+|++-.+++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLV----------ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 46888886 679999999998 789999999999998776654 2577889999998866542
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 74 ~~g~id~lvnnA 85 (235)
T 3l6e_A 74 WGGLPELVLHCA 85 (235)
T ss_dssp HHCSCSEEEEEC
T ss_pred hcCCCcEEEECC
Confidence 113567666554
No 224
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.07 E-value=0.095 Score=51.61 Aligned_cols=72 Identities=8% Similarity=0.193 Sum_probs=54.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCC-CEEEecCCCHHHHHhcC----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGF-PILYGDASRPAVLLSAG---- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~-~vi~GD~~~~~~L~~a~---- 474 (663)
++++|.|. |.+|+.+++.|. ++|++|+++++++++.+...+ ... .++.+|.+|++.++++-
T Consensus 12 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFA----------ASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHH
Confidence 46788875 889999999998 789999999999988766543 233 67899999998876541
Q ss_pred -CCCCcEEEEEc
Q 006034 475 -ITSPKAVMIMY 485 (663)
Q Consensus 475 -i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 82 ~~~~id~li~~A 93 (254)
T 2wsb_A 82 AVAPVSILVNSA 93 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred hhCCCcEEEECC
Confidence 24667776654
No 225
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=93.06 E-value=0.11 Score=51.60 Aligned_cols=72 Identities=14% Similarity=0.004 Sum_probs=55.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc---CCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~---~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+. ...++.+|.+|++.++++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAV----------AAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 46888886 789999999998 7899999999999887766542 356788999999877643
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 76 ~~g~iD~lv~nA 87 (254)
T 1hdc_A 76 EFGSVDGLVNNA 87 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 112567776543
No 226
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=93.05 E-value=0.15 Score=52.67 Aligned_cols=111 Identities=10% Similarity=-0.013 Sum_probs=72.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
-++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+..-.+ +|. +.+.+ .+.|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~~~~---~~~~~ll~~---~~~D~ 70 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRE---------SAQAEVRGIASRRLENAQKMAKELAIPVAY---GSYEELCKD---ETIDI 70 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHH---------SSSEEEEEEBCSSSHHHHHHHHHTTCCCCB---SSHHHHHHC---TTCSE
T ss_pred EEEEEECchHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHHHcCCCcee---CCHHHHhcC---CCCCE
Confidence 479999999999999999972 4677777 66999999888765 3443222 333 34442 47899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEE---EecChhhHH----HHHHcCCCeEEcCc
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYA---RAQDMMHLL----DLKKAGATDAILEN 532 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia---~~~~~~~~~----~l~~~Gad~vi~p~ 532 (663)
|+++++++.. ...+..+-+.+ .++++ .+.+.+..+ ..++.|.-..+...
T Consensus 71 V~i~tp~~~h-~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (330)
T 3e9m_A 71 IYIPTYNQGH-YSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQK 126 (330)
T ss_dssp EEECCCGGGH-HHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred EEEcCCCHHH-HHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEh
Confidence 9999998643 44455555554 25665 234444433 34566776655443
No 227
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=93.01 E-value=0.83 Score=40.01 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=67.2
Q ss_pred CCCCEEEEeCChHHHHHHH----hcCCCEEEecC-CCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHH--hCCCCc
Q 006034 435 VGWPFVAFDLNPSVVKESR----KLGFPILYGDA-SRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRL--AFPAIP 506 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~-~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~--~~~~~~ 506 (663)
...++.++|.|+...+.+. +.++....... +-.+.++...-.+.|.+++-.+-. ......+..+|+ .+++++
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp -CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 3467899999988755544 46666333333 334566666667889887766543 345667778888 678888
Q ss_pred EEEEecC--hhhHHHHHHcCCCeEEcCch
Q 006034 507 IYARAQD--MMHLLDLKKAGATDAILENA 533 (663)
Q Consensus 507 iia~~~~--~~~~~~l~~~Gad~vi~p~~ 533 (663)
+++.... .+......+.|++.++....
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEECCT
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 8887754 56666778899998876653
No 228
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.01 E-value=0.1 Score=56.69 Aligned_cols=66 Identities=14% Similarity=0.287 Sum_probs=50.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+.++|+|+|.+|+.+++.|. ..|.+|++.|.|+++.+.+.+.+..+ .+.+ .-...+|.++
T Consensus 265 GKtVvVtGaGgIG~aiA~~La----------a~GA~Viv~D~~~~~a~~Aa~~g~dv-----~~le----e~~~~aDvVi 325 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALK----------QAGARVIVTEIDPICALQATMEGLQV-----LTLE----DVVSEADIFV 325 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEE-----CCGG----GTTTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHhCCcc-----CCHH----HHHHhcCEEE
Confidence 457999999999999999998 78999999999999988877766532 2222 2234688777
Q ss_pred EEcCC
Q 006034 483 IMYTD 487 (663)
Q Consensus 483 ~~~~d 487 (663)
.+++.
T Consensus 326 ~atG~ 330 (488)
T 3ond_A 326 TTTGN 330 (488)
T ss_dssp ECSSC
T ss_pred eCCCC
Confidence 66553
No 229
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.01 E-value=0.09 Score=52.88 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-----CCCEEEecCCCHHHHHhc--
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-----GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-----~~~vi~GD~~~~~~L~~a-- 473 (663)
.++.++|.|. |.+|+.+++.|. ++|++|+++++++++.+.+.+. ...++.+|.+|++.++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 89 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFA----------EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVD 89 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred cCcEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3366788875 789999999998 7899999999999887765532 466789999999877653
Q ss_pred CC----CCCcEEEEEc
Q 006034 474 GI----TSPKAVMIMY 485 (663)
Q Consensus 474 ~i----~~a~~vv~~~ 485 (663)
.+ .+.|.+|-..
T Consensus 90 ~~~~~~g~iD~lvnnA 105 (272)
T 2nwq_A 90 NLPEEFATLRGLINNA 105 (272)
T ss_dssp TCCGGGSSCCEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 22 3457776643
No 230
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.00 E-value=0.69 Score=47.48 Aligned_cols=134 Identities=14% Similarity=0.206 Sum_probs=80.5
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHH----HHHh----cCC-CEEEecCCCHHHHHhc
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK----ESRK----LGF-PILYGDASRPAVLLSA 473 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~----~~~~----~~~-~vi~GD~~~~~~L~~a 473 (663)
++.|+|.|.+|..++..|. ..+. +++++|.++++++ ++.+ .+. .-+.+. .+. .
T Consensus 2 kv~ViGaG~vG~~~a~~l~----------~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~-----~ 65 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVA----------RQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDY-----G 65 (314)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSS-----G
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCH-----H
Confidence 5889999999999999886 3444 8999999998754 2222 111 224432 222 3
Q ss_pred CCCCCcEEEEEcCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--H-HHHcCC--CeEEcCc-
Q 006034 474 GITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--D-LKKAGA--TDAILEN- 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd-----------~~n~~----~~~~~r~~~~~~~iia~~~~~~~~~--~-l~~~Ga--d~vi~p~- 532 (663)
.+++||.+|++.+.. ..|.. ++..+++.+|+. ++..+.||.+.- . .+..|. ++|+--.
T Consensus 66 a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a-~vivvtNPvd~~t~~~~k~~g~p~~rviG~~t 144 (314)
T 3nep_X 66 PTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDS-TIIVVANPLDVMTYVAYEASGFPTNRVMGMAG 144 (314)
T ss_dssp GGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTC-EEEECCSSHHHHHHHHHHHHTCCGGGEEECCH
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCc-EEEecCCchhHHHHHHHHhcCCChHHEEeecC
Confidence 467899888876432 34554 334556667885 455556665432 2 233453 3555554
Q ss_pred hHHHHHHHHHHHHhcCCCHHHHH
Q 006034 533 AETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
..-..++-..+-+.+++++..++
T Consensus 145 ~LD~~R~~~~la~~lgv~~~~v~ 167 (314)
T 3nep_X 145 VLDTGRFRSFIAEELDVSVRDVQ 167 (314)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEE
T ss_pred chHHHHHHHHHHHHhCcCHHHeE
Confidence 44345566666666777775443
No 231
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.99 E-value=0.31 Score=49.57 Aligned_cols=95 Identities=19% Similarity=0.172 Sum_probs=65.2
Q ss_pred CCCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc
Q 006034 401 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 401 ~~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a 473 (663)
+..++|+-+|+|..+..... +.+ ..+.+|+.||.|++.++.+++ .+..+++||+.+..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~-lA~---------~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGIL-LSH---------VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----- 185 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHH-HHH---------TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-----
T ss_pred CCcCEEEEECCCccHHHHHH-HHH---------ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-----
Confidence 45679999999986544222 221 457899999999999887764 24678899997632
Q ss_pred CCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 006034 474 GITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 511 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~ 511 (663)
-+.+|.|++...-.+..-......|.+.|+-.++.+.
T Consensus 186 -d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 -GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp -GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 2678988765443223334556677788887777764
No 232
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=92.98 E-value=0.13 Score=51.03 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=55.3
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc-----
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA----- 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a----- 473 (663)
.++++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ .....+.+|.+|++..+++
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFA----------KGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 356888887 568999999998 789999999999998877654 3467789999999876542
Q ss_pred -CCCCCcEEEEEc
Q 006034 474 -GITSPKAVMIMY 485 (663)
Q Consensus 474 -~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 79 ~~~g~id~li~~A 91 (261)
T 3n74_A 79 SKFGKVDILVNNA 91 (261)
T ss_dssp HHHSCCCEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 112567666543
No 233
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.97 E-value=0.12 Score=51.54 Aligned_cols=72 Identities=18% Similarity=0.097 Sum_probs=54.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++-.+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCA----------EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46778876 569999999998 789999999999988766543 2 456788999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 123678776544
No 234
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.97 E-value=0.67 Score=47.61 Aligned_cols=137 Identities=17% Similarity=0.120 Sum_probs=80.0
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHH----HhcC-----CCEEEecCCCHHHHHh
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES----RKLG-----FPILYGDASRPAVLLS 472 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~----~~~~-----~~vi~GD~~~~~~L~~ 472 (663)
...+|.|+|.|.+|..++..|.. .....+++++|.|+++.+.. .+.. ..-++. .+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~--------~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~~----- 69 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMN--------QGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GDY----- 69 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--------HTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CCG-----
T ss_pred CCCEEEEECcCHHHHHHHHHHHh--------CCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--CcH-----
Confidence 34589999999999999998862 11224799999999865432 2211 112222 122
Q ss_pred cCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-
Q 006034 473 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE- 531 (663)
Q Consensus 473 a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p- 531 (663)
..+++||.||++.+- | ..|.. ++..+++..|+..++. +.||-+. ..+ +..|.+ +|+--
T Consensus 70 ~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv-~tNPv~~~~~~~~~~s~~p~~rviG~g 148 (316)
T 1ldn_A 70 DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV-ATNPVDILTYATWKFSGLPHERVIGSG 148 (316)
T ss_dssp GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE-CSSSHHHHHHHHHHHHTCCGGGEEECT
T ss_pred HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE-eCCchHHHHHHHHHHhCCCHHHEEecc
Confidence 237899988888431 2 34433 4455666788866555 5666433 233 333443 66644
Q ss_pred chHHHHHHHHHHHHhcCCCHHHH
Q 006034 532 NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 532 ~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
...-..++-+.+-+.+++++..+
T Consensus 149 t~lD~~r~~~~la~~l~v~~~~v 171 (316)
T 1ldn_A 149 TILDTARFRFLLGEYFSVAPQNV 171 (316)
T ss_dssp THHHHHHHHHHHHHHHTSCGGGE
T ss_pred cchHHHHHHHHHHHHhCCCHHHe
Confidence 44444555666666667666433
No 235
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.97 E-value=0.032 Score=53.40 Aligned_cols=67 Identities=12% Similarity=0.073 Sum_probs=53.7
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++++|.| .|.+|+.+++.|. ++|+ +|++++++++. ...+..++.+|.+|++.++++- .|
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~----------~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~---~d 67 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRIL----------SEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS---ID 67 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH----------HCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC---CS
T ss_pred CceEEEECCCcHHHHHHHHHHH----------hCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh---hc
Confidence 35799998 5999999999997 6777 99999998875 2345667889999998887765 89
Q ss_pred EEEEEcC
Q 006034 480 AVMIMYT 486 (663)
Q Consensus 480 ~vv~~~~ 486 (663)
.+|-+..
T Consensus 68 ~vi~~a~ 74 (215)
T 2a35_A 68 TAFCCLG 74 (215)
T ss_dssp EEEECCC
T ss_pred EEEECee
Confidence 8887664
No 236
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=92.94 E-value=0.18 Score=50.49 Aligned_cols=72 Identities=18% Similarity=0.064 Sum_probs=53.8
Q ss_pred CcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH---HHHHHHh--cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~---~~~~~~~--~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++ ..+.+.+ ....++.+|.+|++.++++
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCF----------NQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN 76 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH----------TTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHH
Confidence 56899997 599999999998 78999999999886 4444443 2367899999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHTSCEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123567666543
No 237
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=92.91 E-value=0.26 Score=42.64 Aligned_cols=96 Identities=17% Similarity=0.073 Sum_probs=63.1
Q ss_pred CCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCcEEEEe
Q 006034 437 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYARA 511 (663)
Q Consensus 437 ~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~iia~~ 511 (663)
.++.++|.|+...+.++ +.|+.++.--.+-.+.++...-.+.|.+++-.+-. ......+..+|+.+|+.+++...
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s 81 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS 81 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEe
Confidence 36889999988755544 46666652222223444444445789887776532 34567888899999998888776
Q ss_pred cChh--hHHHHHHcCCCeEEcCc
Q 006034 512 QDMM--HLLDLKKAGATDAILEN 532 (663)
Q Consensus 512 ~~~~--~~~~l~~~Gad~vi~p~ 532 (663)
.+.+ ......+.|++.++...
T Consensus 82 ~~~~~~~~~~~~~~g~~~~l~kp 104 (134)
T 3f6c_A 82 AKNDHFYGKHCADAGANGFVSKK 104 (134)
T ss_dssp CC---CTHHHHHHTTCSEEEEGG
T ss_pred CCCChHHHHHHHHhCCCEEEeCC
Confidence 6544 67778899999876654
No 238
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.91 E-value=0.12 Score=51.21 Aligned_cols=72 Identities=13% Similarity=0.105 Sum_probs=55.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++|+|+++.+...+ .....+.+|.+|++-.+++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYV----------REGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 46788886 779999999998 789999999999998776654 2456789999999876543
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 79 ~~g~id~lv~~A 90 (259)
T 4e6p_A 79 HAGGLDILVNNA 90 (259)
T ss_dssp HSSSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123677776654
No 239
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.90 E-value=0.17 Score=51.05 Aligned_cols=73 Identities=15% Similarity=0.081 Sum_probs=53.8
Q ss_pred CCCcE-EEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc---
Q 006034 402 GSEPV-VIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 402 ~~~~v-iI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a--- 473 (663)
.++++ +|.|. +-+|+.+++.|. ++|.+|++.|+|+++.+...+ .....+.+|.+|++-.+++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la----------~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFV----------AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH
Confidence 44554 55565 459999999998 899999999999998877654 2466788999999877642
Q ss_pred ---CCCCCcEEEEE
Q 006034 474 ---GITSPKAVMIM 484 (663)
Q Consensus 474 ---~i~~a~~vv~~ 484 (663)
...+-|.+|-.
T Consensus 97 ~~~~~G~iDiLVNN 110 (273)
T 4fgs_A 97 VKAEAGRIDVLFVN 110 (273)
T ss_dssp HHHHHSCEEEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 22356766543
No 240
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=92.88 E-value=0.042 Score=56.72 Aligned_cols=70 Identities=23% Similarity=0.243 Sum_probs=52.4
Q ss_pred CcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHH---HHHh-----cCCCEEEecCCCHHHHHhcC
Q 006034 404 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK---ESRK-----LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~---~~~~-----~~~~vi~GD~~~~~~L~~a~ 474 (663)
++++|.| .|-+|+.+++.|. ++|++|+++.++++..+ .+.+ .+..++.||.+|++.++++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 74 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLL----------ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEA- 74 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHH-
T ss_pred CEEEEECCchHHHHHHHHHHH----------HCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHH-
Confidence 4688988 6999999999997 78999999888876332 2211 2356889999998877665
Q ss_pred CCCCcEEEEE
Q 006034 475 ITSPKAVMIM 484 (663)
Q Consensus 475 i~~a~~vv~~ 484 (663)
++++|.|+-+
T Consensus 75 ~~~~d~Vih~ 84 (337)
T 2c29_D 75 IKGCTGVFHV 84 (337)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 3567877643
No 241
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=92.87 E-value=0.24 Score=44.65 Aligned_cols=56 Identities=14% Similarity=-0.006 Sum_probs=39.6
Q ss_pred CCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEEEEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 477 SPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 477 ~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~iia~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
+.|.+++-.+- +..-...+..+|+.+|++++++...+ .+......++|++.++.-.
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP 141 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKP 141 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESS
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCC
Confidence 45766655442 23446678888999999998887765 5667778899999876554
No 242
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.86 E-value=0.15 Score=55.32 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=61.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh----HHHHHHHhcCCCEEEecCCCHHHHHhcCCCC-
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----SVVKESRKLGFPILYGDASRPAVLLSAGITS- 477 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~----~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~- 477 (663)
.+|+.|+|.|..|..+|+.|. +.|++|.+.|.++ +..+.+++.|..+..|.-.+ +.+ ++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~----------~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~-~~~-----~~~ 72 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLA----------KLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL-ELL-----DED 72 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHH----------HTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG-GGG-----GSC
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH-Hhh-----cCC
Confidence 468999999999999999997 8999999999864 34567788899998886532 222 34
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHhC
Q 006034 478 PKAVMIMYTDKKRTIEAVQRLRLAF 502 (663)
Q Consensus 478 a~~vv~~~~dd~~n~~~~~~~r~~~ 502 (663)
+|.||+...=+..|-. ...+|+.+
T Consensus 73 ~d~vv~spgi~~~~p~-~~~a~~~g 96 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPM-VKKALEKQ 96 (451)
T ss_dssp EEEEEECTTSCTTSHH-HHHHHHTT
T ss_pred CCEEEECCcCCCCChh-HHHHHHCC
Confidence 8988776655444544 44566654
No 243
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=92.86 E-value=0.5 Score=41.91 Aligned_cols=97 Identities=8% Similarity=-0.040 Sum_probs=63.0
Q ss_pred CCCEEEEeCChHHHHHHHh----cCC-CEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEEE
Q 006034 436 GWPFVAFDLNPSVVKESRK----LGF-PILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 436 ~~~vvvid~d~~~~~~~~~----~~~-~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~iia 509 (663)
..++.++|.|+...+.+++ .+. ..+.--.+-.+.++...-.+.|.+++-.+- +..-...+..+|+.+|+++++.
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 99 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVV 99 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 4567888888776555443 231 222222233456666666778877776553 2345677888899899989888
Q ss_pred EecCh--hhHHHHHHcCCCeEEcCc
Q 006034 510 RAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 510 ~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
...+. +......+.|++.++...
T Consensus 100 ls~~~~~~~~~~~~~~g~~~~l~Kp 124 (150)
T 4e7p_A 100 VTTFKRAGYFERAVKAGVDAYVLKE 124 (150)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEETT
T ss_pred EeCCCCHHHHHHHHHCCCcEEEecC
Confidence 77654 466778899999876654
No 244
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=92.86 E-value=0.095 Score=51.48 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=54.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a~- 474 (663)
+.++|.|. |.+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++-
T Consensus 3 k~vlItGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFL----------ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIA 72 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 46888876 788999999998 789999999999987665432 23567899999998776541
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 73 ~~~~~~~~id~li~~A 88 (250)
T 2cfc_A 73 ATMEQFGAIDVLVNNA 88 (250)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 13568776654
No 245
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.86 E-value=0.12 Score=51.56 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=52.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--------cCCCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--------LGFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--------~~~~vi~GD~~~~~~L~~a- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 83 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLA----------AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 83 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 46778875 788999999998 789999999999987655432 2356688999999877643
Q ss_pred -----CCCCCcEEEEE
Q 006034 474 -----GITSPKAVMIM 484 (663)
Q Consensus 474 -----~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 84 ~~~~~~~g~id~lv~n 99 (267)
T 1iy8_A 84 TATTERFGRIDGFFNN 99 (267)
T ss_dssp HHHHHHHSCCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 12256766654
No 246
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.85 E-value=0.046 Score=57.39 Aligned_cols=84 Identities=20% Similarity=0.109 Sum_probs=55.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCC-CHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDAS-RPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~-~~~~L~~a~i~~a~~vv 482 (663)
++++|+|.|..|..+++..+ +.|++++++|.|++... .+.-..++.-|.+ |.+.+.+ -.+++|.++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak----------~~G~~vv~vd~~~~~~~--~~~aD~~~~~~~~~d~~~~~~-~~~~~D~v~ 68 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSK----------KAGMKVVLVDKNPQALI--RNYADEFYCFDVIKEPEKLLE-LSKRVDAVL 68 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCTTCTT--TTTSSEEEECCTTTCHHHHHH-HHTSSSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCCCChh--HhhCCEEEECCCCcCHHHHHH-HhcCCCEEE
Confidence 47999999999999999997 89999999999987532 1112234555554 4444332 235788887
Q ss_pred EEcCCHHHHHHHHHHHHH
Q 006034 483 IMYTDKKRTIEAVQRLRL 500 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~ 500 (663)
...++...+-.....+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~ 86 (363)
T 4ffl_A 69 PVNENLACIEFLNSIKEK 86 (363)
T ss_dssp ECCCCHHHHHHHHHHGGG
T ss_pred ECCCChhHHHHHHHHHHH
Confidence 777665444443333333
No 247
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=92.81 E-value=0.13 Score=51.58 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=55.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc--CCCEEEecCCCHHHHHhc------C
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSA------G 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~--~~~vi~GD~~~~~~L~~a------~ 474 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+. +..++.+|.+|++-++++ .
T Consensus 10 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFV----------NSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788875 789999999998 7899999999999887766542 467789999999877653 1
Q ss_pred CCCCcEEEEEc
Q 006034 475 ITSPKAVMIMY 485 (663)
Q Consensus 475 i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 80 ~g~iD~lv~nA 90 (270)
T 1yde_A 80 FGRLDCVVNNA 90 (270)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 23567666543
No 248
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.80 E-value=0.12 Score=50.91 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=53.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++.++++
T Consensus 8 k~~lVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 8 KVALITGASSGIGEATARALA----------AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS 77 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 46788875 789999999998 789999999999987665442 2 356788999999877643
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 78 ~~~~~g~id~lv~nA 92 (247)
T 2jah_A 78 TVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 123567776543
No 249
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=92.79 E-value=0.26 Score=51.21 Aligned_cols=108 Identities=15% Similarity=0.152 Sum_probs=69.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
-+|.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.. .+ +|. +.+++ .++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~g~~-~~---~~~~~~l~~---~~~D~ 68 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA---------NPDLELVVIADPFIEGAQRLAEANGAE-AV---ASPDEVFAR---DDIDG 68 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHTTTCE-EE---SSHHHHTTC---SCCCE
T ss_pred eEEEEECCcHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHcCCc-ee---CCHHHHhcC---CCCCE
Confidence 379999999999999999972 4577777 78999999888765 3532 22 233 34432 47899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHcCCCeEEc
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 530 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~Gad~vi~ 530 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+.+ ++.|.-..+.
T Consensus 69 V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 69 IVIGSPTSTH-VDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred EEEeCCchhh-HHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 9999988643 44445555554 256652 3444443333 4456544443
No 250
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.78 E-value=0.093 Score=51.31 Aligned_cols=72 Identities=14% Similarity=0.034 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHHHHHHHhc---CCCEEEecCCCHHHHHhcCC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSAGI-- 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~~~~~~~~---~~~vi~GD~~~~~~L~~a~i-- 475 (663)
++++|.|. |-+|+.+++.|. +.| ++|++++++++..+.+.+. ...++.+|.+|++.++++--
T Consensus 4 k~vlItGasggiG~~la~~l~----------~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLV----------KDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV 73 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHH----------TCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHH----------hcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHH
Confidence 46778775 788999999998 788 9999999999887766543 45778999999987765310
Q ss_pred ------CCCcEEEEEc
Q 006034 476 ------TSPKAVMIMY 485 (663)
Q Consensus 476 ------~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 74 ~~~~g~~~id~li~~A 89 (250)
T 1yo6_A 74 GEIVGSDGLSLLINNA 89 (250)
T ss_dssp HHHHGGGCCCEEEECC
T ss_pred HHhcCCCCCcEEEECC
Confidence 1567776543
No 251
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=92.78 E-value=0.038 Score=57.05 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=52.7
Q ss_pred CCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH------HHHH-hcCCCEEEecCCCHHHHHhcC
Q 006034 403 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV------KESR-KLGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 403 ~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~------~~~~-~~~~~vi~GD~~~~~~L~~a~ 474 (663)
.++++|.| .|-+|+.+++.|. ++|++|+++.++++.. +.+. ..+..++.||.+|++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 77 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLL----------QKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAP- 77 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH----------HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHH-
T ss_pred CCEEEEECCchHHHHHHHHHHH----------HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHH-
Confidence 45799999 5999999999997 7899999888776532 1222 23567889999998877654
Q ss_pred CCCCcEEEEE
Q 006034 475 ITSPKAVMIM 484 (663)
Q Consensus 475 i~~a~~vv~~ 484 (663)
++++|+|+-+
T Consensus 78 ~~~~D~Vih~ 87 (338)
T 2rh8_A 78 IAGCDFVFHV 87 (338)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEe
Confidence 3467877754
No 252
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.76 E-value=0.064 Score=54.04 Aligned_cols=112 Identities=14% Similarity=0.041 Sum_probs=68.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CC--CEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF--PILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~--~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++++|+|.|.+|+.+++.|. +.|.+|++.++++++.+.+.+. +. .+- ..+.+.+.+ .++|
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~----------~~G~~V~v~~R~~~~~~~la~~~~~~~~~~---~~~~~~~~~---~~~D 182 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLL----------SLDCAVTITNRTVSRAEELAKLFAHTGSIQ---ALSMDELEG---HEFD 182 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHHTGGGSSEE---ECCSGGGTT---CCCS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHHhhccCCee---EecHHHhcc---CCCC
Confidence 357999999999999999997 6789999999999998777642 11 222 233333322 6899
Q ss_pred EEEEEcCCHHH-HHHHHHHHHH-hCCCCcEEEEecChh---hHHHHHHcCCCeEEcCc
Q 006034 480 AVMIMYTDKKR-TIEAVQRLRL-AFPAIPIYARAQDMM---HLLDLKKAGATDAILEN 532 (663)
Q Consensus 480 ~vv~~~~dd~~-n~~~~~~~r~-~~~~~~iia~~~~~~---~~~~l~~~Gad~vi~p~ 532 (663)
.+|.+++.... +.. ..-.+ +.++..++=...++. ..+..++.|+..+++--
T Consensus 183 ivVn~t~~~~~~~~~--~i~~~~l~~~~~v~D~~y~p~~t~~~~~a~~~G~~~~~~G~ 238 (271)
T 1nyt_A 183 LIINATSSGISGDIP--AIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGL 238 (271)
T ss_dssp EEEECCSCGGGTCCC--CCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEECTH
T ss_pred EEEECCCCCCCCCCC--CCCHHHcCCCCEEEEeccCCcCCHHHHHHHHcCCCeecCCH
Confidence 99998886432 100 00011 123322333333332 34556778885466553
No 253
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.74 E-value=0.1 Score=51.41 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=55.0
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc--
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a-- 473 (663)
.+.++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ . ...++.+|.+|++-++++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALA----------REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 346788886 678999999998 789999999999988766543 2 356788999999876653
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 79 ~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 113667777654
No 254
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.73 E-value=0.11 Score=51.83 Aligned_cols=72 Identities=25% Similarity=0.249 Sum_probs=55.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH-HHHHhcCCCEEEecCCCHHHHHhc------CC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV-KESRKLGFPILYGDASRPAVLLSA------GI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~-~~~~~~~~~vi~GD~~~~~~L~~a------~i 475 (663)
++++|.|. |-+|+.+++.|. +.|++|++++++++.. +.+.+.+..++.+|.+|++-++++ ..
T Consensus 28 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLL----------EHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHH----------HTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 46777776 679999999998 7899999999998764 445556788999999999876543 22
Q ss_pred CCCcEEEEEc
Q 006034 476 TSPKAVMIMY 485 (663)
Q Consensus 476 ~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 98 g~iD~lv~nA 107 (260)
T 3gem_A 98 SSLRAVVHNA 107 (260)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 4678776544
No 255
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=92.73 E-value=0.12 Score=52.00 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=54.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ .....+.+|.+|++..+++
T Consensus 33 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYA----------EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 46777776 679999999998 789999999999987665443 2467889999999877653
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 103 ~~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 103 MTGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 112567766543
No 256
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.71 E-value=0.055 Score=55.02 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCC--CC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGIT--SP 478 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~--~a 478 (663)
++++|.|. |-+|+.+++.|. +. |++|++++++++..+ .. .+..++.||.+|++.++++ ++ ++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~D~~d~~~~~~~-~~~~~~ 69 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLR----------KLYGTENVIASDIRKLNTD-VV-NSGPFEVVNALDFNQIEHL-VEVHKI 69 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHH----------HHHCGGGEEEEESCCCSCH-HH-HSSCEEECCTTCHHHHHHH-HHHTTC
T ss_pred ceEEEECCccHHHHHHHHHHH----------HhCCCCEEEEEcCCCcccc-cc-CCCceEEecCCCHHHHHHH-HhhcCC
Confidence 46999998 999999999997 55 899999998876532 22 3678999999999887764 22 67
Q ss_pred cEEEEEcC
Q 006034 479 KAVMIMYT 486 (663)
Q Consensus 479 ~~vv~~~~ 486 (663)
|.||-+..
T Consensus 70 d~vih~a~ 77 (312)
T 2yy7_A 70 TDIYLMAA 77 (312)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 88876643
No 257
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.71 E-value=0.13 Score=50.80 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=54.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---------cCCCEEEecCCCHHHHHh
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---------LGFPILYGDASRPAVLLS 472 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---------~~~~vi~GD~~~~~~L~~ 472 (663)
.+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-.++
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLA----------TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT 76 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHH
Confidence 456788886 779999999998 789999999999988766543 345678899999886654
Q ss_pred c------CCCCCcEEEEEc
Q 006034 473 A------GITSPKAVMIMY 485 (663)
Q Consensus 473 a------~i~~a~~vv~~~ 485 (663)
+ ...+.|.+|-..
T Consensus 77 ~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 77 EIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp HHHHHHHHHCCEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 3 113567666544
No 258
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.71 E-value=0.13 Score=51.23 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc---CCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~---~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+. ...++.+|.+|++.++++
T Consensus 7 k~vlITGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFA----------REGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46788876 789999999998 7899999999999987776542 456788999999877653
Q ss_pred CCCCCcEEEEE
Q 006034 474 GITSPKAVMIM 484 (663)
Q Consensus 474 ~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 77 ~~g~iD~lvnn 87 (263)
T 2a4k_A 77 EFGRLHGVAHF 87 (263)
T ss_dssp HHSCCCEEEEG
T ss_pred HcCCCcEEEEC
Confidence 12356766644
No 259
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.70 E-value=0.16 Score=51.22 Aligned_cols=116 Identities=11% Similarity=-0.076 Sum_probs=71.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhc-C-CCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-G-FPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~-~-~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.++++|+|.|..|+.++..|. +.|. ++.++++++++++.+.+. + ..+-.-+..| +.+ .++|
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~----------~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~---~~~D 183 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFL----------QAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG---QSFD 183 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT---CCCS
T ss_pred CCEEEEECccHHHHHHHHHHH----------HcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc---cCCC
Confidence 468999999999999999998 6785 899999999998887753 1 1122222211 222 7899
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH---HHHHHcCCCeEEcCchH
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL---LDLKKAGATDAILENAE 534 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~~---~~l~~~Gad~vi~p~~~ 534 (663)
.+|.+|+.....-....-...+.++.-++=.+.++... +..++.|+..+++-...
T Consensus 184 ivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~~Gl~M 241 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADGVGM 241 (272)
T ss_dssp EEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHHHHHHHHHSCCEEECTHHH
T ss_pred EEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHHHHHHHHCCCCEEECCHHH
Confidence 88888764321000000111234443344455665433 44567788767777653
No 260
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=92.70 E-value=0.24 Score=51.23 Aligned_cols=83 Identities=14% Similarity=0.175 Sum_probs=54.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++-|+|+|++|+.+|+.|. ..|.+|++.|++++..+ ...-.+.-.+-++.+ +++|.|
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~-----~~~~~~~~~~l~ell-----~~aDvV 195 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKAS----------ALGMHVIGVNTTGHPAD-----HFHETVAFTATADAL-----ATANFI 195 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSCCCCT-----TCSEEEEGGGCHHHH-----HHCSEE
T ss_pred cCCeEEEECcCHHHHHHHHHHH----------hCCCEEEEECCCcchhH-----hHhhccccCCHHHHH-----hhCCEE
Confidence 3457999999999999999997 78999999999876533 222222222223444 468888
Q ss_pred EEEcCCHH--HHHHHHHHHHHhCCC
Q 006034 482 MIMYTDKK--RTIEAVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~dd~--~n~~~~~~~r~~~~~ 504 (663)
++..+..+ .++.-......+.|+
T Consensus 196 ~l~lPlt~~t~~li~~~~l~~mk~g 220 (324)
T 3evt_A 196 VNALPLTPTTHHLFSTELFQQTKQQ 220 (324)
T ss_dssp EECCCCCGGGTTCBSHHHHHTCCSC
T ss_pred EEcCCCchHHHHhcCHHHHhcCCCC
Confidence 88877543 233323444555555
No 261
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.68 E-value=0.14 Score=50.94 Aligned_cols=72 Identities=13% Similarity=0.035 Sum_probs=53.3
Q ss_pred CcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh---HHHHHHHhc--CCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP---SVVKESRKL--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~---~~~~~~~~~--~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++ +..+.+.+. ...++.+|.+|++.++++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMH----------REGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA 79 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHH----------HTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH----------HCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHH
Confidence 46888887 589999999998 7899999999987 444544432 357889999999876542
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 80 ~~~~~~g~iD~lv~~A 95 (265)
T 1qsg_A 80 ELGKVWPKFDGFVHSI 95 (265)
T ss_dssp HHHTTCSSEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 233567776543
No 262
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=92.66 E-value=0.14 Score=50.82 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=53.2
Q ss_pred CcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH---HHHHHHh--cCCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~---~~~~~~~--~~~~vi~GD~~~~~~L~~a~- 474 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++ ..+.+.+ .+..++.+|.+|++.++++-
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLK----------EAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHH----------HHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHH
Confidence 46889997 589999999998 78999999999986 4444443 23678899999998776531
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 79 ~~~~~~g~iD~lv~~A 94 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAI 94 (261)
T ss_dssp HHHHHHSSEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12567666543
No 263
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.66 E-value=0.13 Score=51.31 Aligned_cols=131 Identities=15% Similarity=-0.010 Sum_probs=76.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++|+|.|..|+.++..|. +.|. ++.+.++++++++.+.+. +... +. +.+.+ -++++|.+|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~----------~~G~~~I~v~nR~~~ka~~la~~-~~~~--~~---~~~~~-~~~~aDiVIn 172 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALL----------QMGVKDIWVVNRTIERAKALDFP-VKIF--SL---DQLDE-VVKKAKSLFN 172 (253)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCCEEEEESCHHHHHTCCSS-CEEE--EG---GGHHH-HHHTCSEEEE
T ss_pred eEEEECcHHHHHHHHHHHH----------HcCCCEEEEEeCCHHHHHHHHHH-cccC--CH---HHHHh-hhcCCCEEEE
Confidence 8999999999999999997 6777 899999999998877653 2221 11 12222 2457898888
Q ss_pred EcCCHHH-HHHHHHHHHHhCCCCcEEEEecC-hhhHHHHHHcCCCeEEcCchHHHHHHHHHHHHhcCCCHHH
Q 006034 484 MYTDKKR-TIEAVQRLRLAFPAIPIYARAQD-MMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDD 553 (663)
Q Consensus 484 ~~~dd~~-n~~~~~~~r~~~~~~~iia~~~~-~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~~~~~~~~~ 553 (663)
+|+.... +.. ......+.++.-++-.+.+ ....+..++.|+..+++-....-.|-+...--..|.+|+.
T Consensus 173 atp~gm~p~~~-~i~~~~l~~~~~V~Divy~~T~ll~~A~~~G~~~~~~Gl~MLv~Qa~~af~~wtg~~~~~ 243 (253)
T 3u62_A 173 TTSVGMKGEEL-PVSDDSLKNLSLVYDVIYFDTPLVVKARKLGVKHIIKGNLMFYYQAMENLKIWGIYDEEV 243 (253)
T ss_dssp CSSTTTTSCCC-SCCHHHHTTCSEEEECSSSCCHHHHHHHHHTCSEEECTHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCCCCCCCCCC-CCCHHHhCcCCEEEEeeCCCcHHHHHHHHCCCcEEECCHHHHHHHHHHHHHHHhCCCHHH
Confidence 7753100 000 0011223455334444443 3444556778886455554433333343444444666644
No 264
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=92.66 E-value=0.1 Score=51.59 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=54.4
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------C
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------G 474 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------~ 474 (663)
+++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ ....++.+|.+|++.++++ .
T Consensus 2 ~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 71 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFI----------QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred EEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4677775 789999999998 789999999999988776654 2466788999999877653 2
Q ss_pred CCCCcEEEEE
Q 006034 475 ITSPKAVMIM 484 (663)
Q Consensus 475 i~~a~~vv~~ 484 (663)
..+.|.+|-.
T Consensus 72 ~g~iD~lvnn 81 (248)
T 3asu_A 72 WCNIDILVNN 81 (248)
T ss_dssp TCCCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 2367877654
No 265
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=92.64 E-value=0.15 Score=49.72 Aligned_cols=72 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhcCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAGI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a~i 475 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-++++--
T Consensus 3 k~vlITGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALA----------RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence 46888886 568999999998 789999999999988665432 245678899999998876522
Q ss_pred ------CCCcEEEEEc
Q 006034 476 ------TSPKAVMIMY 485 (663)
Q Consensus 476 ------~~a~~vv~~~ 485 (663)
.+.|.+|-..
T Consensus 73 ~~~~~~g~id~li~~A 88 (235)
T 3l77_A 73 KVLERFGDVDVVVANA 88 (235)
T ss_dssp -HHHHHSSCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 2568776654
No 266
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.64 E-value=0.085 Score=53.26 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=53.7
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c---CCCEEEecCCCHHHHHhc-
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L---GFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~---~~~vi~GD~~~~~~L~~a- 473 (663)
.++++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++.++++
T Consensus 28 ~k~vlITGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~ 97 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLA----------KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFV 97 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 356788887 789999999998 789999999999988765543 1 356788999998766543
Q ss_pred -----CCCCCcEEEEE
Q 006034 474 -----GITSPKAVMIM 484 (663)
Q Consensus 474 -----~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 98 ~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 98 AQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHTSCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 11366777643
No 267
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=92.63 E-value=0.19 Score=51.58 Aligned_cols=109 Identities=14% Similarity=0.107 Sum_probs=68.7
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
-++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+. .. .+. +-++.+++ .++|+|+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~---------~~~~~~v~v~d~~~~~~~~~~~~-~~-~~~--~~~~~l~~---~~~D~V~ 74 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAG---------LPGAALVRLASSNPDNLALVPPG-CV-IES--DWRSVVSA---PEVEAVI 74 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHH---------CTTEEEEEEEESCHHHHTTCCTT-CE-EES--STHHHHTC---TTCCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHhh-Cc-ccC--CHHHHhhC---CCCCEEE
Confidence 479999999999999999972 4566655 889999988766554 22 222 23445543 4689999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|....+..
T Consensus 75 i~tp~~~h-~~~~~~al~~G--k~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~ 127 (315)
T 3c1a_A 75 IATPPATH-AEITLAAIASG--KAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEH 127 (315)
T ss_dssp EESCGGGH-HHHHHHHHHTT--CEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EeCChHHH-HHHHHHHHHCC--CcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEee
Confidence 99987643 34444444443 256654 23443333 3456787765543
No 268
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=92.62 E-value=0.15 Score=50.66 Aligned_cols=72 Identities=14% Similarity=0.078 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++-.+++
T Consensus 7 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFA----------KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 45677776 679999999998 789999999999998776653 1356788999999876553
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~~~~g~id~lv~nA 91 (257)
T 3imf_A 77 IDEKFGRIDILINNA 91 (257)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 113567776544
No 269
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=92.62 E-value=0.082 Score=55.01 Aligned_cols=71 Identities=20% Similarity=0.253 Sum_probs=55.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC-----CCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhc--CC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-----WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA--GI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~-----~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a--~i 475 (663)
++|+|.|. |-+|+.+++.|. ++| ++|++++++++... ....+..++.||.+|++.++++ +.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~----------~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~ 70 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILP----------LADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPL 70 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTT----------STTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred CEEEEECCCcHHHHHHHHHHH----------hCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcC
Confidence 36899986 999999999997 677 89999999876533 1234678899999999988764 33
Q ss_pred CCCcEEEEEc
Q 006034 476 TSPKAVMIMY 485 (663)
Q Consensus 476 ~~a~~vv~~~ 485 (663)
+++|.|+-+.
T Consensus 71 ~~~d~vih~a 80 (364)
T 2v6g_A 71 TDVTHVFYVT 80 (364)
T ss_dssp TTCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3489887764
No 270
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=92.60 E-value=0.13 Score=51.15 Aligned_cols=72 Identities=15% Similarity=0.024 Sum_probs=54.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhcC-----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a~----- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMV----------AEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHH
Confidence 46888875 678999999998 789999999999988766543 23567899999998776531
Q ss_pred -CCCCcEEEEEc
Q 006034 475 -ITSPKAVMIMY 485 (663)
Q Consensus 475 -i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 78 ~~g~iD~lv~~A 89 (260)
T 1nff_A 78 AFGGLHVLVNNA 89 (260)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 12577776553
No 271
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=92.59 E-value=0.098 Score=51.85 Aligned_cols=73 Identities=12% Similarity=0.070 Sum_probs=54.0
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhcC-
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a~- 474 (663)
.+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++-.+++-
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFA----------AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence 356788886 568999999998 789999999999987655443 2 3567889999998775431
Q ss_pred -C---CCCcEEEEEc
Q 006034 475 -I---TSPKAVMIMY 485 (663)
Q Consensus 475 -i---~~a~~vv~~~ 485 (663)
+ .+.|.+|-..
T Consensus 77 ~~~~~g~id~lv~nA 91 (252)
T 3h7a_A 77 AADAHAPLEVTIFNV 91 (252)
T ss_dssp HHHHHSCEEEEEECC
T ss_pred HHHhhCCceEEEECC
Confidence 0 3567666544
No 272
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=92.56 E-value=0.12 Score=52.03 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=54.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc-----C
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA-----G 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a-----~ 474 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ ....++.+|.+|++.++++ .
T Consensus 31 k~vlVTGas~GIG~aia~~l~----------~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLH----------ADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45777776 678999999998 789999999999998877654 2467889999999876542 1
Q ss_pred CCCCcEEEEE
Q 006034 475 ITSPKAVMIM 484 (663)
Q Consensus 475 i~~a~~vv~~ 484 (663)
..+.|.+|..
T Consensus 101 ~~~id~lv~~ 110 (281)
T 3ppi_A 101 LGRLRYAVVA 110 (281)
T ss_dssp SSEEEEEEEC
T ss_pred hCCCCeEEEc
Confidence 2345666544
No 273
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.54 E-value=0.14 Score=50.98 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=46.0
Q ss_pred CCCc-EEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cC--CCEEEecCCCHHHHHh
Q 006034 402 GSEP-VVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LG--FPILYGDASRPAVLLS 472 (663)
Q Consensus 402 ~~~~-viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~--~~vi~GD~~~~~~L~~ 472 (663)
++++ ++|-|. +-+|+.+++.|. ++|.+|++.|+|+++.++..+ .+ ...+.+|.+|++-.++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la----------~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~ 73 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFA----------LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEE 73 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 4444 455565 569999999998 799999999999998765543 33 4457889998887654
No 274
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=92.54 E-value=0.086 Score=51.16 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=49.8
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCE-EEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~v-vvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
...+++|+|.|+.|+.+++.+.. +..+.++ -++|.||++..... .+.++. + ..| +++.--+. |.
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~--------~~~g~~iVg~~D~dp~k~g~~i-~gv~V~-~-~~d---l~eli~~~-D~ 148 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFT--------KNNNTKISMAFDINESKIGTEV-GGVPVY-N-LDD---LEQHVKDE-SV 148 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC--------------CCEEEEEESCTTTTTCEE-TTEEEE-E-GGG---HHHHCSSC-CE
T ss_pred CCCEEEEEccCHHHHHHHHHHhc--------ccCCcEEEEEEeCCHHHHHhHh-cCCeee-c-hhh---HHHHHHhC-CE
Confidence 34579999999999999995320 1456654 47899998765322 244444 3 333 32221123 99
Q ss_pred EEEEcCCHHHHHHHHHHHHHhC
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAF 502 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~ 502 (663)
++++++++... .++..+.+.+
T Consensus 149 ViIAvPs~~~~-ei~~~l~~aG 169 (215)
T 2vt3_A 149 AILTVPAVAAQ-SITDRLVALG 169 (215)
T ss_dssp EEECSCHHHHH-HHHHHHHHTT
T ss_pred EEEecCchhHH-HHHHHHHHcC
Confidence 99999876543 5566666655
No 275
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=92.50 E-value=0.11 Score=51.57 Aligned_cols=72 Identities=19% Similarity=0.057 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhcC-----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a~----- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++.++++=
T Consensus 13 k~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLV----------GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46788876 788999999998 789999999999887665543 24677899999998776531
Q ss_pred -CCCCcEEEEEc
Q 006034 475 -ITSPKAVMIMY 485 (663)
Q Consensus 475 -i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 83 ~~g~id~li~~A 94 (265)
T 2o23_A 83 KFGRVDVAVNCA 94 (265)
T ss_dssp HHSCCCEEEECC
T ss_pred HCCCCCEEEECC
Confidence 12677776543
No 276
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=92.50 E-value=0.12 Score=51.35 Aligned_cols=72 Identities=10% Similarity=0.004 Sum_probs=53.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a~-- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++=
T Consensus 10 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELA----------SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46788875 688999999998 789999999999987655432 2 3567889999998765431
Q ss_pred ----C-CCCcEEEEEc
Q 006034 475 ----I-TSPKAVMIMY 485 (663)
Q Consensus 475 ----i-~~a~~vv~~~ 485 (663)
. .+.|.+|-..
T Consensus 80 ~~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 80 VANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHHTTTCCCEEEECC
T ss_pred HHHHcCCCCCEEEECC
Confidence 1 4678776554
No 277
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.49 E-value=0.58 Score=47.89 Aligned_cols=134 Identities=14% Similarity=0.179 Sum_probs=81.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH-h--c-------CCCEEEecCCCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR-K--L-------GFPILYGDASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~-~--~-------~~~vi~GD~~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. ..++ +++++|.|+++.+... + + ...+.. . +|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la----------~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t-~d~~---- 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA----------AKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-T-NNYA---- 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-E-SCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-C-CCHH----
Confidence 47999999999999999997 5554 7999999997765422 1 1 122222 1 2222
Q ss_pred cCCCCCcEEEEEcC---------CH--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-cCC--CeEEcC-
Q 006034 473 AGITSPKAVMIMYT---------DK--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TDAILE- 531 (663)
Q Consensus 473 a~i~~a~~vv~~~~---------dd--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~~-~Ga--d~vi~p- 531 (663)
.+++||.||.+.+ +| ..|.. ++..+++..|+..++. +.||.+. ..+++ .|. ++|+--
T Consensus 67 -a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~-~tNPv~~~t~~~~~~~~~~~~rviG~g 144 (309)
T 1ur5_A 67 -DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM-VNNPLDAMTYLAAEVSGFPKERVIGQA 144 (309)
T ss_dssp -GGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred -HHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-cCCchHHHHHHHHHHcCCCHHHEEECC
Confidence 2678998888862 22 34543 3444555677755544 5555433 23333 343 367766
Q ss_pred chHHHHHHHHHHHHhcCCCHHHHH
Q 006034 532 NAETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 532 ~~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
...-..++.+.+-+.+++++..++
T Consensus 145 t~LD~~r~~~~la~~lgv~~~~v~ 168 (309)
T 1ur5_A 145 GVLDAARYRTFIAMEAGVSVEDVQ 168 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cchHHHHHHHHHHHHhCCChhhee
Confidence 444455666666677777765443
No 278
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.49 E-value=0.1 Score=51.07 Aligned_cols=72 Identities=10% Similarity=0.047 Sum_probs=54.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |.+|+.+++.|. ++|++|+++++++++.+.+.+ ....++.+|.+|++.++++
T Consensus 8 ~~vlVtGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLA----------SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE 77 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence 45777765 789999999998 789999999999987665432 2356788999999887654
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 78 ~~~~~~~~~d~vi~~A 93 (248)
T 2pnf_A 78 EIYNLVDGIDILVNNA 93 (248)
T ss_dssp HHHHHSSCCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 123678777654
No 279
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=92.48 E-value=0.041 Score=55.05 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=54.7
Q ss_pred CcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++++|.| .|-+|+.+++.|. ++|++|++.++++++.+ ..+..++.+|.+|++.++++ +++.|.+|
T Consensus 4 k~vlVTGasg~IG~~la~~L~----------~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi 69 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLA----------PMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAM-VAGCDGIV 69 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTG----------GGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHH-HTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHH-HcCCCEEE
Confidence 4688888 5899999999997 78999999999886543 34578899999999988764 34788777
Q ss_pred EEc
Q 006034 483 IMY 485 (663)
Q Consensus 483 ~~~ 485 (663)
-..
T Consensus 70 ~~A 72 (267)
T 3rft_A 70 HLG 72 (267)
T ss_dssp ECC
T ss_pred ECC
Confidence 653
No 280
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.48 E-value=0.13 Score=51.11 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=54.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ .....+.+|.+|++-.+++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLV----------EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence 46788876 679999999998 789999999999998877654 3467889999999876542
Q ss_pred CCCCCcEEEEE
Q 006034 474 GITSPKAVMIM 484 (663)
Q Consensus 474 ~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 79 ~~g~id~lv~n 89 (255)
T 4eso_A 79 TLGAIDLLHIN 89 (255)
T ss_dssp HHSSEEEEEEC
T ss_pred HhCCCCEEEEC
Confidence 12356766554
No 281
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.45 E-value=0.13 Score=51.56 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=53.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cC----CCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LG----FPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~----~~vi~GD~~~~~~L~~a- 473 (663)
+.++|.|. |.+|+.+++.|. +.|++|+++++++++.+.+.+ .+ ..++.+|.+|++.++++
T Consensus 33 k~vlVTGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 102 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALV----------QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 102 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHH
Confidence 46788875 789999999998 789999999999887665442 22 45688999999876543
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 103 ~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 103 SAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHCCCSEEEECC
T ss_pred HHHHHhCCCCCEEEECC
Confidence 123678777654
No 282
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.43 E-value=0.15 Score=50.72 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=51.9
Q ss_pred CCcEEEEcCC-c--chHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH---h----cCCCEEEecCCCHHHHHh
Q 006034 403 SEPVVIVGFG-Q--MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR---K----LGFPILYGDASRPAVLLS 472 (663)
Q Consensus 403 ~~~viI~G~g-~--~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~---~----~~~~vi~GD~~~~~~L~~ 472 (663)
.++++|.|.+ . +|+.+++.|. ++|++|++++++++..+.+. + ....++.+|.+|++-.++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLH----------EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH----------HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHH
Confidence 3568888874 4 8999999998 78999999999875444333 2 147789999999987655
Q ss_pred c------CCCCCcEEEEE
Q 006034 473 A------GITSPKAVMIM 484 (663)
Q Consensus 473 a------~i~~a~~vv~~ 484 (663)
+ ...+.|.+|-.
T Consensus 77 ~~~~~~~~~g~id~li~~ 94 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHC 94 (266)
T ss_dssp HHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHhCCeeEEEEc
Confidence 3 11256766654
No 283
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=92.43 E-value=0.45 Score=42.31 Aligned_cols=99 Identities=14% Similarity=0.067 Sum_probs=61.8
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCC-HHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcE
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASR-PAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPI 507 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~-~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~i 507 (663)
..+.+|.++|.|+...+.+. +.+...+.+.+.+ .+.++...-.+.|.+++-.+- +......+..+|+.+|++++
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 92 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRV 92 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeE
Confidence 45667888888877654443 3443333322332 344444433567877776553 23456778888999999888
Q ss_pred EEEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 508 YARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 508 ia~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
+...... +......+.|++.++...
T Consensus 93 i~~s~~~~~~~~~~~~~~g~~~~l~Kp 119 (152)
T 3eul_A 93 LLISAHDEPAIVYQALQQGAAGFLLKD 119 (152)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEETT
T ss_pred EEEEccCCHHHHHHHHHcCCCEEEecC
Confidence 8776654 455577889999876654
No 284
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.43 E-value=0.12 Score=53.13 Aligned_cols=68 Identities=21% Similarity=0.348 Sum_probs=50.4
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|+|++|+.+++.|. ..|.+|++.|++++.. ...+.|... .+-++.++ ++|.|
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~~-~~~~~g~~~----~~l~ell~-----~aDvV 200 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIAN----------AMGMKVLAYDILDIRE-KAEKINAKA----VSLEELLK-----NSDVI 200 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHH----------HTTCEEEEECSSCCHH-HHHHTTCEE----CCHHHHHH-----HCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCCcchh-HHHhcCcee----cCHHHHHh-----hCCEE
Confidence 3457999999999999999997 7899999999998764 344555442 12234443 67888
Q ss_pred EEEcCCHH
Q 006034 482 MIMYTDKK 489 (663)
Q Consensus 482 v~~~~dd~ 489 (663)
+.+.+.+.
T Consensus 201 vl~~P~~~ 208 (313)
T 2ekl_A 201 SLHVTVSK 208 (313)
T ss_dssp EECCCCCT
T ss_pred EEeccCCh
Confidence 88887644
No 285
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.41 E-value=0.73 Score=52.97 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 452 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~ 452 (663)
-++|.|+|.|.+|..+|..|. +.|++|++.|.|++.++..
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la----------~aG~~V~l~D~~~~~~~~~ 351 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALI----------LSNYPVILKEVNEKFLEAG 351 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSHHHHHHH
T ss_pred CcEEEEEcCCHhhHHHHHHHH----------hCCCEEEEEECCHHHHHHH
Confidence 357999999999999999998 7899999999999987764
No 286
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=92.39 E-value=0.14 Score=50.80 Aligned_cols=72 Identities=14% Similarity=0.115 Sum_probs=53.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a~- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFA----------KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVE 77 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 46788876 789999999998 789999999999987655432 23567889999998765531
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 78 ~~~~~~g~id~lv~~A 93 (263)
T 3ai3_A 78 SVRSSFGGADILVNNA 93 (263)
T ss_dssp HHHHHHSSCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13678776654
No 287
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.39 E-value=0.16 Score=51.47 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 35 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 104 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYA----------KAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQ 104 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 46788875 778999999998 789999999999987655432 2467789999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 105 ~~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 105 IESEVGIIDILVNNA 119 (291)
T ss_dssp HHHHTCCCCEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 123578776543
No 288
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=92.38 E-value=0.12 Score=51.99 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=53.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c-----CCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-----GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~-----~~~vi~GD~~~~~~L~~a 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++|++++..+...+ . ...++.+|.+|++-.+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLV----------AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence 46778876 678999999998 789999999999988665443 2 356788999999866543
Q ss_pred ------CCCCCcEEEEEc
Q 006034 474 ------GITSPKAVMIMY 485 (663)
Q Consensus 474 ------~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 82 ~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 82 VDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 112567666543
No 289
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.36 E-value=0.76 Score=47.22 Aligned_cols=133 Identities=17% Similarity=0.151 Sum_probs=82.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHHHHHH-H---h----cCCC-EEEecCCCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKES-R---K----LGFP-ILYGDASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~~~~~-~---~----~~~~-vi~GD~~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. ..+ .+++++|.|+++++.. . + .+.+ -+.+ .+.
T Consensus 7 ~KI~IIGaG~vG~~la~~l~----------~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~~----- 69 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLV----------NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GEY----- 69 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CCG-----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CCH-----
Confidence 47999999999999999886 334 5899999999876531 2 2 0011 2333 222
Q ss_pred cCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-
Q 006034 473 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE- 531 (663)
Q Consensus 473 a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p- 531 (663)
..+++||.||++.+- | ..|.. ++..+++.+|+..++. +.||.+. ..+ +..|.+ +|+--
T Consensus 70 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~~k~~~~p~~rviG~g 148 (317)
T 3d0o_A 70 SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV-ATNPVDILAYATWKFSGLPKERVIGSG 148 (317)
T ss_dssp GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECT
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHhCCCHHHEEecC
Confidence 236799988887642 1 34443 3444566688877666 6676543 233 333544 67655
Q ss_pred chHHHHHHHHHHHHhcCCCHHHH
Q 006034 532 NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 532 ~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
...-..++.+.+-+.+++++..+
T Consensus 149 t~lD~~r~~~~la~~l~v~~~~v 171 (317)
T 3d0o_A 149 TILDSARFRLLLSEAFDVAPRSV 171 (317)
T ss_dssp THHHHHHHHHHHHHHHTSCGGGC
T ss_pred ccccHHHHHHHHHHHhCcChhhE
Confidence 44445566666666667766443
No 290
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.32 E-value=0.098 Score=52.66 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=52.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c-----CCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-----GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~-----~~~vi~GD~~~~~~L~~a 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 76 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFA----------QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHH
Confidence 45677765 779999999998 789999999999987665432 1 356788999999876543
Q ss_pred ------CCCCCcEEEEEc
Q 006034 474 ------GITSPKAVMIMY 485 (663)
Q Consensus 474 ------~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 77 INSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 123567766543
No 291
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=92.31 E-value=0.19 Score=52.47 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=67.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++++|.|+|++|+.+++.|. +.|.+|++.|.|+++.+...+.+...+ +.++.|. .++|.+
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~----------~~GakVvvsD~~~~~~~~a~~~ga~~v----~~~ell~----~~~DIl 235 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAA----------EAGAQLLVADTDTERVAHAVALGHTAV----ALEDVLS----TPCDVF 235 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC----CGGGGGG----CCCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHH----------HCCCEEEEEeCCccHHHHHHhcCCEEe----ChHHhhc----Ccccee
Confidence 3468999999999999999997 789999999999887333333443332 1234443 377866
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEEec-----ChhhHHHHHHcCCCeEEcCch
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ-----DMMHLLDLKKAGATDAILENA 533 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~~~-----~~~~~~~l~~~Gad~vi~p~~ 533 (663)
+-+... |..-...++.+. .++++..- +++..+.|++-|+ ++.|..
T Consensus 236 iP~A~~---~~I~~~~~~~lk--~~iVie~AN~p~t~~eA~~~L~~~gI--lv~Pd~ 285 (355)
T 1c1d_A 236 APCAMG---GVITTEVARTLD--CSVVAGAANNVIADEAASDILHARGI--LYAPDF 285 (355)
T ss_dssp EECSCS---CCBCHHHHHHCC--CSEECCSCTTCBCSHHHHHHHHHTTC--EECCHH
T ss_pred cHhHHH---hhcCHHHHhhCC--CCEEEECCCCCCCCHHHHHHHHhCCE--EEECCe
Confidence 543322 222223345554 35665433 2355678888875 677764
No 292
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=92.31 E-value=0.23 Score=51.15 Aligned_cols=109 Identities=11% Similarity=0.038 Sum_probs=67.9
Q ss_pred cEEEEcCCcchHHH-HHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 405 PVVIVGFGQMGQVL-ANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 405 ~viI~G~g~~g~~l-a~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
++.|+|+|++|+.. ++.|. +.+.+++ +.|.|+++.+.+.+ .+....+ +|. +.+++ .++|+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~----------~~~~~~vav~d~~~~~~~~~~~~~g~~~~~---~~~~~~l~~---~~~D~ 65 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIR----------ATGGEVVSMMSTSAERGAAYATENGIGKSV---TSVEELVGD---PDVDA 65 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHH----------HTTCEEEEEECSCHHHHHHHHHHTTCSCCB---SCHHHHHTC---TTCCE
T ss_pred eEEEEcccHHHHHhhhHHhh----------cCCCeEEEEECCCHHHHHHHHHHcCCCccc---CCHHHHhcC---CCCCE
Confidence 58899999999998 88887 4667766 67999999887665 3443122 333 34432 46899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEEcCc
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAILEN 532 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi~p~ 532 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+. .++.|+...+...
T Consensus 66 V~i~tp~~~h-~~~~~~al~~G--k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~ 121 (332)
T 2glx_A 66 VYVSTTNELH-REQTLAAIRAG--KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHH 121 (332)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCC
T ss_pred EEEeCChhHh-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeeh
Confidence 9999987643 33333443433 356653 233333333 3556877666543
No 293
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=92.30 E-value=0.34 Score=42.13 Aligned_cols=98 Identities=7% Similarity=-0.026 Sum_probs=63.5
Q ss_pred CCCCCEEEEeCChHHHHHHHh----cCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEE
Q 006034 434 TVGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 508 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~~----~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~ii 508 (663)
+...++.++|.|+...+.+.+ .++.+..-+ +-.+.++...-.+.|.+++-.+- +..-...+..+|+.+|+++++
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~-~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAG-DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEES-SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEEC-CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 456789999988877555443 445554322 23344544444568877776553 234567788889999998888
Q ss_pred EEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 509 ARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 509 a~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
+...+. +......+.|++.++...
T Consensus 84 ~~s~~~~~~~~~~~~~~g~~~~l~kP 109 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIELGVHLFLPKP 109 (137)
T ss_dssp ECCCCCCHHHHHHHHHHCCSEECCSS
T ss_pred EEecCcChHHHHHHHhCCcceeEcCC
Confidence 876644 466677899999877654
No 294
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.30 E-value=0.62 Score=47.72 Aligned_cols=134 Identities=18% Similarity=0.198 Sum_probs=82.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHH-HHh--cC-----CCEEEecCCCHHHHHhcCCC
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKE-SRK--LG-----FPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~-~~~--~~-----~~vi~GD~~~~~~L~~a~i~ 476 (663)
+|.|+|.|.+|..++-.|.. .....+++++|.|+++.+. +.+ +. ..-+.++ +.+ .++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~--------~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~--~~~-----a~~ 66 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL--------LGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAG--SYG-----DLE 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------TTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEEC--CGG-----GGT
T ss_pred EEEEECCCHHHHHHHHHHHh--------CCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEEC--CHH-----HhC
Confidence 58999999999999998862 1123579999999987764 222 11 1123332 222 268
Q ss_pred CCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC-chHH
Q 006034 477 SPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE-NAET 535 (663)
Q Consensus 477 ~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p-~~~~ 535 (663)
+||.||++.+- | ..|.. ++..+++.+|+..++. +.||.+. ..+ +..|.+ +|+-- ...-
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD 145 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV-ATNPVDVMTQVAYALSGLPPGRVVGSGTILD 145 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHTCCGGGEEECTTHHH
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE-ecCchHHHHHHHHHHcCCCHHHEEecCcchh
Confidence 99988887643 2 34443 3455566789977666 5776543 223 334544 67666 4444
Q ss_pred HHHHHHHHHHhcCCCHHHH
Q 006034 536 SLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 536 ~~~la~~~~~~~~~~~~~~ 554 (663)
..++.+.+-+.+++++..+
T Consensus 146 ~~R~~~~la~~lgv~~~~v 164 (310)
T 2xxj_A 146 TARFRALLAEYLRVAPQSV 164 (310)
T ss_dssp HHHHHHHHHHHHTSCGGGE
T ss_pred HHHHHHHHHHHhCcCHHHe
Confidence 5566666666667766433
No 295
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=92.27 E-value=0.066 Score=55.42 Aligned_cols=72 Identities=10% Similarity=0.130 Sum_probs=54.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChH-----HHHHHHhcCCCEEEecCCCHHHHHhcCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPS-----VVKESRKLGFPILYGDASRPAVLLSAGI 475 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~-----~~~~~~~~~~~vi~GD~~~~~~L~~a~i 475 (663)
++++|.|. |-+|+.+++.|. +. |++|+++++++. ..+.+...+..++.||.+|++.++++ +
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~ 73 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVY----------NNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKL-A 73 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHH-H
T ss_pred cEEEEeCCccHHHHHHHHHHH----------HhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHH-h
Confidence 46999985 999999999997 44 899999998642 22222224677899999999988775 4
Q ss_pred CCCcEEEEEcC
Q 006034 476 TSPKAVMIMYT 486 (663)
Q Consensus 476 ~~a~~vv~~~~ 486 (663)
+++|.||-+..
T Consensus 74 ~~~d~vih~A~ 84 (348)
T 1oc2_A 74 AKADAIVHYAA 84 (348)
T ss_dssp TTCSEEEECCS
T ss_pred hcCCEEEECCc
Confidence 56688877654
No 296
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=92.27 E-value=0.42 Score=49.77 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=72.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHH-HHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPA-VLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~-~L~~a~i~~a~~ 480 (663)
-+|.|+|+|.+|+..++.|.+ .++.+++ +.|.|+++.+.+.+ .+.+. .+|.+ .+.+ .+.|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~---~~~D~ 69 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTK---------SEKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAR---EDVEM 69 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTT---------CSSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHC---SSCCE
T ss_pred ceEEEEccCHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcC---CCCCE
Confidence 479999999999999999972 4577766 66999999887765 45543 34444 4432 46899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcCc
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILEN 532 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p~ 532 (663)
|+++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|.-..+...
T Consensus 70 V~i~tp~~~h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 70 VIITVPNDKH-AEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS 125 (354)
T ss_dssp EEECSCTTSH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG
T ss_pred EEEeCChHHH-HHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec
Confidence 9999998643 33444454554 356663 33444433 33566776655443
No 297
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.24 E-value=1.4 Score=45.79 Aligned_cols=137 Identities=20% Similarity=0.204 Sum_probs=83.2
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC--CCEEEEeCChHHHHH----HHhcCC---CEEEecCCCHHHHH
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE----SRKLGF---PILYGDASRPAVLL 471 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~d~~~~~~----~~~~~~---~vi~GD~~~~~~L~ 471 (663)
..++|.|+|. |.+|..++..+. ..| .+++++|.|+++++- +.+..+ .+.. .+|. .
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~----------~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~--t~d~---~ 71 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAA----------MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF--TSDI---K 71 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHH----------HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE--ESCH---H
T ss_pred CCCEEEEECCCChHHHHHHHHHH----------hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE--cCCH---H
Confidence 4568999998 999999998775 344 589999999987653 333211 1111 1222 1
Q ss_pred hcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH---HHHHcCC--CeEEcC
Q 006034 472 SAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL---DLKKAGA--TDAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~~---~l~~~Ga--d~vi~p 531 (663)
..+++||.||++.+. | ..|.. ++..+++..|+..++..+.||.+.- ..+..|. ++|+.-
T Consensus 72 -~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~sg~p~~rv~g~ 150 (343)
T 3fi9_A 72 -EALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTL 150 (343)
T ss_dssp -HHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHHHTCCGGGEEEE
T ss_pred -HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHHcCCCcceEEEe
Confidence 124689988877432 2 35544 3445667788865455566765432 2344564 356655
Q ss_pred chHHHHHHHHHHHHhcCCCHHHH
Q 006034 532 NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 532 ~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
..+-..++-..+-+.++++|..+
T Consensus 151 t~LDs~R~~~~la~~l~v~~~~v 173 (343)
T 3fi9_A 151 AGLDSTRLQSELAKHFGIKQSLV 173 (343)
T ss_dssp CCHHHHHHHHHHHHHHTSCGGGE
T ss_pred cCcHHHHHHHHHHHHhCcCHHHc
Confidence 55555566666667777777554
No 298
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.24 E-value=0.086 Score=55.01 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=49.7
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCC-------CCEEEEeCChH-----HHHHHHhcCCCE-----------E
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-------WPFVAFDLNPS-----VVKESRKLGFPI-----------L 460 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~-------~~vvvid~d~~-----~~~~~~~~~~~v-----------i 460 (663)
.+|.|+|.|.+|..++..|. +.| ++|.++|++++ +.+.+.+.+... +
T Consensus 9 mkI~iIG~G~mG~~~a~~l~----------~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 78 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVG----------GNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNV 78 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHH----------HHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTE
T ss_pred CeEEEECCCHHHHHHHHHHH----------hcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCe
Confidence 37999999999999999997 566 89999999998 777776532110 1
Q ss_pred EecCCCHHHHHhcCCCCCcEEEEEcCCH
Q 006034 461 YGDASRPAVLLSAGITSPKAVMIMYTDK 488 (663)
Q Consensus 461 ~GD~~~~~~L~~a~i~~a~~vv~~~~dd 488 (663)
... +|.+ + -++++|.|++++.++
T Consensus 79 ~~~-~~~~---~-~~~~aD~Vilav~~~ 101 (354)
T 1x0v_A 79 VAV-PDVV---Q-AAEDADILIFVVPHQ 101 (354)
T ss_dssp EEE-SSHH---H-HHTTCSEEEECCCGG
T ss_pred EEE-cCHH---H-HHcCCCEEEEeCCHH
Confidence 111 2221 1 135789999999874
No 299
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.24 E-value=0.2 Score=50.48 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++|++++..+...+ .....+.+|.+|++..+++
T Consensus 30 k~vlVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLA----------DEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHH
Confidence 34666665 678999999998 789999999999998776654 3577889999999876542
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 100 ~~g~iD~lvnnA 111 (277)
T 3gvc_A 100 AFGGVDKLVANA 111 (277)
T ss_dssp HHSSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123567666543
No 300
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=92.22 E-value=0.17 Score=50.81 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=54.0
Q ss_pred CcEEEEcC-Cc--chHHHHHHhcccccCCCCCCCCCCCEEEEeCCh--HHHHHHHh--cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQ--MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRK--LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~--~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~--~~~~~~~~--~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |. +|+.+++.|. ++|++|+++++++ +..+.+.+ ....++.+|.+|++-++++
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMH----------REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHH----------HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH----------HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence 46777775 44 9999999998 7899999999998 66666654 2467889999999876653
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 97 ~~~~~g~id~li~nA 111 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHCSSCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 123567776543
No 301
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=92.22 E-value=0.18 Score=50.37 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=53.4
Q ss_pred CcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH-HHHHHh---cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRK---LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~-~~~~~~---~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. +.|++|+++++++++ .+.+.+ ....++.+|.+|++-++++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQ----------EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGR 77 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHH----------HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHH----------HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHH
Confidence 56888894 899999999998 789999999999876 355543 2467899999999876543
Q ss_pred -----C-CCCCcEEEEE
Q 006034 474 -----G-ITSPKAVMIM 484 (663)
Q Consensus 474 -----~-i~~a~~vv~~ 484 (663)
| ..+.|.+|-.
T Consensus 78 ~~~~~g~~~~iD~lv~n 94 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHS 94 (269)
T ss_dssp HHHHHCTTCCEEEEEEC
T ss_pred HHHHhCCCCCceEEEEC
Confidence 1 1156777654
No 302
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.22 E-value=0.074 Score=55.96 Aligned_cols=74 Identities=19% Similarity=0.103 Sum_probs=52.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
++++|+|.|.+|+.+++.+. ..|.+|+++|+++++.+.+.+.+...+..+..+.+.+.+ -+.++|.+|-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~----------~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~ 236 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAV----------GLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIG 236 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEE
Confidence 78999999999999999997 788899999999999888875431111111123333322 1347898888
Q ss_pred EcCCH
Q 006034 484 MYTDK 488 (663)
Q Consensus 484 ~~~dd 488 (663)
++..+
T Consensus 237 ~~~~~ 241 (361)
T 1pjc_A 237 AVLVP 241 (361)
T ss_dssp CCCCT
T ss_pred CCCcC
Confidence 77653
No 303
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=92.21 E-value=0.15 Score=50.47 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 72 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLV----------KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 72 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46888875 679999999998 789999999999987655432 2 356788999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 73 ~~~~~g~id~lv~nA 87 (256)
T 1geg_A 73 ARKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHHTTCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 123678777644
No 304
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.21 E-value=0.11 Score=52.99 Aligned_cols=116 Identities=9% Similarity=-0.013 Sum_probs=70.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
.++++|+|.|..|+.++..|. +.|. +|++.++++++++.+.+. +... ++..+.+.+.+ .++++|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~----------~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~-~~~~aDi 207 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLL----------STAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAET-RLAEYDI 207 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHH-TGGGCSE
T ss_pred CCEEEEECcHHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHh-hhccCCE
Confidence 457999999999999999998 6787 899999999998887753 2210 01112233433 4578999
Q ss_pred EEEEcCCHHH-HHH-HHHHHHHhCCCCcEEEEecChh---hHHHHHHcCCCeEEcCc
Q 006034 481 VMIMYTDKKR-TIE-AVQRLRLAFPAIPIYARAQDMM---HLLDLKKAGATDAILEN 532 (663)
Q Consensus 481 vv~~~~dd~~-n~~-~~~~~r~~~~~~~iia~~~~~~---~~~~l~~~Gad~vi~p~ 532 (663)
+|.+++.... +.. .......+.++..++=...++. ..+..++.|+. +++--
T Consensus 208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~ll~~A~~~G~~-~v~Gl 263 (297)
T 2egg_A 208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETKWLKEAKARGAR-VQNGV 263 (297)
T ss_dssp EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCHHHHHHHHTTCE-EECSH
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCHHHHHHHHCcCE-EECCH
Confidence 9998876431 100 0000011233433444444443 44556778884 55553
No 305
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=92.16 E-value=0.3 Score=50.93 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=72.7
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCC-CCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNT-VGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~-~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
+-++.|+|+|++|+..++.|.+ . .+.+++ +.|.|+++.+.+.+ .+.. .+. +-++.+++ .+.|
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~---------~~~~~~lvav~d~~~~~~~~~~~~~~~~-~~~--~~~~ll~~---~~~D 77 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEK---------HADRAELIDVCDIDPAALKAAVERTGAR-GHA--SLTDMLAQ---TDAD 77 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHH---------TTTTEEEEEEECSSHHHHHHHHHHHCCE-EES--CHHHHHHH---CCCS
T ss_pred cceEEEEcCcHHHHHHHHHHHh---------CCCCeEEEEEEcCCHHHHHHHHHHcCCc-eeC--CHHHHhcC---CCCC
Confidence 3479999999999999999972 3 577766 77999999888765 4542 222 23455654 5789
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcCc
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILEN 532 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p~ 532 (663)
+|+++++++.. ...+..+-+.+ .++++. +.+.+..+ ..++.|.-..+...
T Consensus 78 ~V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~ 134 (354)
T 3q2i_A 78 IVILTTPSGLH-PTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ 134 (354)
T ss_dssp EEEECSCGGGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred EEEECCCcHHH-HHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc
Confidence 99999998643 33444444444 356662 33444433 34666776655443
No 306
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=91.39 E-value=0.027 Score=54.21 Aligned_cols=66 Identities=20% Similarity=0.291 Sum_probs=47.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
..++.|+|+|++|..+++.|. +.|++|.+.|++++ .+.+.+.+..+. +.++ -++++|.++
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~----------~~G~~V~~~~r~~~-~~~~~~~g~~~~----~~~~-----~~~~aDvVi 78 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKML----------QCGYSVVFGSRNPQ-VSSLLPRGAEVL----CYSE-----AASRSDVIV 78 (201)
Confidence 346999999999999999997 67899999999887 444443332211 1112 245789898
Q ss_pred EEcCCH
Q 006034 483 IMYTDK 488 (663)
Q Consensus 483 ~~~~dd 488 (663)
+++..+
T Consensus 79 lav~~~ 84 (201)
T 2yjz_A 79 LAVHRE 84 (201)
Confidence 888875
No 307
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=92.15 E-value=0.93 Score=40.30 Aligned_cols=96 Identities=15% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCcEEEE
Q 006034 436 GWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 436 ~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~iia~ 510 (663)
+.++.++|.|+...+.+. +.|+.+..- .+-.+.++...-...|.+++-.+-+ ......+..+|+.+|++++++.
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~l 81 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGFTVSSF-ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILV 81 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCcEEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEE
Confidence 457899999987755443 467776643 3345566666667789888776532 3446677888888999998887
Q ss_pred ecCh--hhHHHHHHcCCCeEEcCc
Q 006034 511 AQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 511 ~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
.... +......+.|++.++...
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP 105 (155)
T 1qkk_A 82 TGHGDIPMAVQAIQDGAYDFIAKP 105 (155)
T ss_dssp ECGGGHHHHHHHHHTTCCEEEESS
T ss_pred ECCCChHHHHHHHhcCCCeEEeCC
Confidence 7644 455667789999877654
No 308
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.12 E-value=0.14 Score=53.05 Aligned_cols=136 Identities=14% Similarity=0.132 Sum_probs=79.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH----h----cCCC-EEEecCCCHHHHHh
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR----K----LGFP-ILYGDASRPAVLLS 472 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~----~----~~~~-vi~GD~~~~~~L~~ 472 (663)
+.+|.|+|.|.+|..++..|. ..|+ +|+++|.|+++++... + .+.. -+.+. +|. ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la----------~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~---~e 74 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCA----------LRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSY---EA 74 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe-CCH---HH
Confidence 357999999999999999997 5666 8999999998776521 1 1111 12211 232 22
Q ss_pred cCCCCCcEEEEEc--CC------------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHH-cCC--Ce
Q 006034 473 AGITSPKAVMIMY--TD------------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TD 527 (663)
Q Consensus 473 a~i~~a~~vv~~~--~d------------d--~~n~----~~~~~~r~~~~~~~iia~~~~~~~~--~~l~~-~Ga--d~ 527 (663)
.+++||.||++. +. | ..|. .++..+++..|+..++ .+.|+.+. ..+++ .|. ++
T Consensus 75 -a~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi-~~tNP~~~~t~~~~~~~~~~~~r 152 (331)
T 1pzg_A 75 -ALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII-VVTNPLDCMVKVMCEASGVPTNM 152 (331)
T ss_dssp -HHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEE-ECCSSHHHHHHHHHHHHCCCGGG
T ss_pred -HhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE-EEcCchHHHHHHHHHhcCCChhc
Confidence 357899888886 21 1 1232 3455566677885544 45666543 23322 332 35
Q ss_pred EEcC-chHHHHHHHHHHHHhcCCCHHHH
Q 006034 528 AILE-NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 528 vi~p-~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
|+-- ...-..++.+.+-+.+++++..+
T Consensus 153 viG~gt~LD~~R~~~~la~~lgv~~~~v 180 (331)
T 1pzg_A 153 ICGMACMLDSGRFRRYVADALSVSPRDV 180 (331)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTSCGGGE
T ss_pred EEeccchHHHHHHHHHHHHHhCCCHHHc
Confidence 5555 33333455555656666666433
No 309
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=92.12 E-value=0.16 Score=50.42 Aligned_cols=71 Identities=13% Similarity=0.181 Sum_probs=52.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ . ...++.+|.+|++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLA----------EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS 77 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46788875 789999999998 789999999999987665432 2 356788999999866542
Q ss_pred ---CCCCCcEEEEE
Q 006034 474 ---GITSPKAVMIM 484 (663)
Q Consensus 474 ---~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 78 ~~~~~g~id~lv~n 91 (262)
T 1zem_A 78 VVRDFGKIDFLFNN 91 (262)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHhCCCCEEEEC
Confidence 12356777654
No 310
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.12 E-value=0.22 Score=50.64 Aligned_cols=72 Identities=15% Similarity=0.004 Sum_probs=53.2
Q ss_pred CcEEEEcCC---cchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH---h--cCCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGFG---QMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR---K--LGFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~g---~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~---~--~~~~vi~GD~~~~~~L~~a~- 474 (663)
+.++|.|.+ -+|+.+++.|. ++|++|++++++++..+.+. + ....++.+|.+|++-.+++=
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVC----------AQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence 568888986 89999999998 78999999999976543332 2 24568899999998776531
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 101 ~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13567776544
No 311
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.12 E-value=0.93 Score=46.81 Aligned_cols=133 Identities=17% Similarity=0.239 Sum_probs=79.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH----h----c--CCCEEEecCCCHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR----K----L--GFPILYGDASRPAVLL 471 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~----~----~--~~~vi~GD~~~~~~L~ 471 (663)
+.+|.|+|.|.+|..++..|. ..|+ +|+++|.|+++++... + . ... +.+. +|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la----------~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t-~d~~--- 78 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLG----------QKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAK-IFGE-NNYE--- 78 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEE-SCGG---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCE-EEEC-CCHH---
Confidence 357999999999999999997 5677 8999999998876422 1 0 112 2221 2222
Q ss_pred hcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHHc---CCCeEEcC
Q 006034 472 SAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKKA---GATDAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~~~---Gad~vi~p 531 (663)
.+++||.||.+.+- | .+|.. ++..+.+..|+..++. +.|+.+. ..+++. -.++|+--
T Consensus 79 --al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNP~~~~t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 79 --YLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVIC-ITNPLDAMVYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp --GGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred --HHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEE-ecCchHHHHHHHHHhcCCChhhEEEe
Confidence 36789999888621 1 23444 3444556678855444 4555543 233332 24455555
Q ss_pred -chHHHHHHHHHHHHhcCCCHHH
Q 006034 532 -NAETSLQLGSKLLKGFGVMSDD 553 (663)
Q Consensus 532 -~~~~~~~la~~~~~~~~~~~~~ 553 (663)
......++.+.+-+.+++++..
T Consensus 156 ~t~Ld~~R~~~~la~~lgv~~~~ 178 (328)
T 2hjr_A 156 SGVLDSARFRCNLSRALGVKPSD 178 (328)
T ss_dssp CHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CcHHHHHHHHHHHHHHhCCCHHH
Confidence 3444444555555566666543
No 312
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.11 E-value=0.056 Score=55.49 Aligned_cols=72 Identities=22% Similarity=0.210 Sum_probs=52.9
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCC-CCCcEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGI-TSPKAVM 482 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i-~~a~~vv 482 (663)
+++|.|. |-+|+.+++.|. +.|++|++++++++........+..++.+|.+|++.++++=- .++|.||
T Consensus 3 ~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLV----------DEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHH----------hCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 6899985 999999999997 689999999987543211111257889999999988766411 2688887
Q ss_pred EEcC
Q 006034 483 IMYT 486 (663)
Q Consensus 483 ~~~~ 486 (663)
-+..
T Consensus 73 h~a~ 76 (330)
T 2c20_A 73 HFAA 76 (330)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6653
No 313
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.09 E-value=1.6 Score=44.78 Aligned_cols=135 Identities=16% Similarity=0.176 Sum_probs=81.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCC--hHHHHH----HHh------cCCCEEEecCCCHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN--PSVVKE----SRK------LGFPILYGDASRPAV 469 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d--~~~~~~----~~~------~~~~vi~GD~~~~~~ 469 (663)
.+++.|+|.|.+|..++..|. ..++ +++++|.+ +++.+- +.+ .... +.+. +|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~----------~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~-i~~t-~d~-- 73 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLA----------QKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDAN-IIGT-SDY-- 73 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCC-EEEE-SCG--
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCE-EEEc-CCH--
Confidence 468999999999999999997 5677 99999999 444322 111 1122 3321 122
Q ss_pred HHhcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH---HHHHcCC--CeEE
Q 006034 470 LLSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL---DLKKAGA--TDAI 529 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~~---~l~~~Ga--d~vi 529 (663)
..+++||.||++.+. | +.|.. ++..+++.+|+.. +..+.||.+.- ..+..|. .+++
T Consensus 74 ---~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~-vlvvsNPvd~~t~~~~k~sg~p~~rvi 149 (315)
T 3tl2_A 74 ---ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAI-IVVLTNPVDAMTYSVFKEAGFPKERVI 149 (315)
T ss_dssp ---GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCE-EEECCSSHHHHHHHHHHHHCCCGGGEE
T ss_pred ---HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE-EEECCChHHHHHHHHHHhcCCChHHEE
Confidence 356899988887532 2 34543 4445666788855 45555664432 2344564 3565
Q ss_pred cC-chHHHHHHHHHHHHhcCCCHHHHH
Q 006034 530 LE-NAETSLQLGSKLLKGFGVMSDDVT 555 (663)
Q Consensus 530 ~p-~~~~~~~la~~~~~~~~~~~~~~~ 555 (663)
-- ...-..+....+-+.+++++..++
T Consensus 150 G~gt~LD~~R~~~~la~~lgv~~~~v~ 176 (315)
T 3tl2_A 150 GQSGVLDTARFRTFIAQELNLSVKDIT 176 (315)
T ss_dssp ECCHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred eeccCcHHHHHHHHHHHHhCcCHHHce
Confidence 55 333345556666666777775443
No 314
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.07 E-value=0.14 Score=51.37 Aligned_cols=118 Identities=12% Similarity=0.013 Sum_probs=70.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.++++|+|.|..|+.++..|. +.|.++.++++++++++.+.+.+..+. +..+ +.++|.+|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~----------~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~--------l~~~DiVI 177 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELK----------KQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP--------KSAFDLII 177 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC--------SSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH--------hccCCEEE
Confidence 568999999999999999998 677999999999999988775453322 2221 22899888
Q ss_pred EEcCCHHH---HHHHHHHHHHhCCCCcEEEEecCh--hhHHHHHHcCCCeEEcCchHHHHHHHH
Q 006034 483 IMYTDKKR---TIEAVQRLRLAFPAIPIYARAQDM--MHLLDLKKAGATDAILENAETSLQLGS 541 (663)
Q Consensus 483 ~~~~dd~~---n~~~~~~~r~~~~~~~iia~~~~~--~~~~~l~~~Gad~vi~p~~~~~~~la~ 541 (663)
-+|+.... .+-.......+.++.-++=.+.++ ...+..++.|+. +++-....-.|-+.
T Consensus 178 naTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P~T~ll~~A~~~G~~-~~~Gl~MLv~Qa~~ 240 (269)
T 3phh_A 178 NATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTPFLSLAKELKTP-FQDGKDMLIYQAAL 240 (269)
T ss_dssp ECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSSCCHHHHHHHHTTCC-EECSHHHHHHHHHH
T ss_pred EcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCCchHHHHHHHHCcCE-EECCHHHHHHHHHH
Confidence 77764210 010000000122332333344554 233445677884 66666433333333
No 315
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.07 E-value=0.11 Score=53.89 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++.|+|+|++|+.+|+.|. ..|.+|++.|++++. +...+.|... .+.+-+ ++++|.|
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV 223 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQ----------SFGMKTIGYDPIISP-EVSASFGVQQ-----LPLEEI----WPLCDFI 223 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSSCH-HHHHHTTCEE-----CCHHHH----GGGCSEE
T ss_pred CcCEEEEEeECHHHHHHHHHHH----------HCCCEEEEECCCcch-hhhhhcCcee-----CCHHHH----HhcCCEE
Confidence 3457999999999999999997 789999999998766 3444555432 233222 2478989
Q ss_pred EEEcCCHHHHH--HHHHHHHHhCCC
Q 006034 482 MIMYTDKKRTI--EAVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~dd~~n~--~~~~~~r~~~~~ 504 (663)
+++.+.++.+. .-....+.+.|+
T Consensus 224 ~l~~P~t~~t~~li~~~~l~~mk~g 248 (335)
T 2g76_A 224 TVHTPLLPSTTGLLNDNTFAQCKKG 248 (335)
T ss_dssp EECCCCCTTTTTSBCHHHHTTSCTT
T ss_pred EEecCCCHHHHHhhCHHHHhhCCCC
Confidence 88888754322 212344445555
No 316
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=92.07 E-value=0.61 Score=40.46 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=60.1
Q ss_pred CCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC------HHHHHHHHHHHHHhCCCCc
Q 006034 437 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD------KKRTIEAVQRLRLAFPAIP 506 (663)
Q Consensus 437 ~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d------d~~n~~~~~~~r~~~~~~~ 506 (663)
.++.++|.|+...+.+. +.|+.+..- .+-.+.++...-.+.|.+++-.+- +......+..+|+.+|+++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 82 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSKVITL-SSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLP 82 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSEEEEE-CCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcEEEEe-CCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCC
Confidence 46778888877655444 245655532 222444444444567877776543 3345667788888889989
Q ss_pred EEEEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 507 IYARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 507 iia~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
++....+. +......+.|++.++...
T Consensus 83 ii~ls~~~~~~~~~~~~~~g~~~~l~kp 110 (140)
T 2qr3_A 83 VVLFTAYADIDLAVRGIKEGASDFVVKP 110 (140)
T ss_dssp EEEEEEGGGHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCCHHHHHHHHHcCchheeeCC
Confidence 88776544 455677789998876543
No 317
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=92.06 E-value=0.21 Score=50.35 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=53.3
Q ss_pred CcEEEEcC---CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH---HHHHHHh--cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~---g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~---~~~~~~~--~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. +.|++|++++++++ ..+.+.+ .+..++.+|.+|++.++++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFH----------REGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKK 91 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence 46888887 589999999998 78999999999985 3444443 2367899999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 92 ~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 92 FLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHTSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123567666543
No 318
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.06 E-value=0.15 Score=55.92 Aligned_cols=43 Identities=21% Similarity=0.259 Sum_probs=37.9
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLG 456 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~ 456 (663)
.+|.|+|.|.+|..+|..|. +. |++|+++|.|+++++.+.+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La----------~~g~g~~V~~~D~~~~~v~~l~~g~ 54 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIA----------HKCPHITVTVVDMNTAKIAEWNSDK 54 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HHCTTSEEEEECSCHHHHHHHTSSS
T ss_pred CEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEECCHHHHHHHHCCC
Confidence 47999999999999999997 44 799999999999999987643
No 319
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=92.03 E-value=0.57 Score=41.20 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=62.4
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcC-CCEEEecCCCHHHHHhcCC--CCCcEEEEEcCC-HHHHHHHHHHHHHhCCCC
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLG-FPILYGDASRPAVLLSAGI--TSPKAVMIMYTD-KKRTIEAVQRLRLAFPAI 505 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~-~~vi~GD~~~~~~L~~a~i--~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~ 505 (663)
..+.+|.++|.|+...+.+. +.+ +.+..- .+..+.+....- ...|.+++-..- +..-...+..+|+.+|++
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 96 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRT-VGRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGL 96 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEE-CCCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTC
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEe-CCHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCC
Confidence 34567778887776654433 345 555542 233334443321 567888776653 345667788889999998
Q ss_pred cEEEEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 506 PIYARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 506 ~iia~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
+++..... .+......++|++.++...
T Consensus 97 ~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp 125 (146)
T 4dad_A 97 TCLLVTTDASSQTLLDAMRAGVRDVLRWP 125 (146)
T ss_dssp EEEEEESCCCHHHHHHHHTTTEEEEEESS
T ss_pred cEEEEeCCCCHHHHHHHHHhCCceeEcCC
Confidence 88877654 4556667789998766554
No 320
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=92.03 E-value=0.04 Score=56.87 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=52.4
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHh-cCCCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
+++|.|. |-+|+.+++.|. +. |++|++++++++..+.+.+ .+..++.||.+|+ +.++++ ++++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~----------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~d~ 70 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLL----------REDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH-VKKCDV 70 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHH----------HSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHH-HHHCSE
T ss_pred eEEEECCCcHHHHHHHHHHH----------HhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhh-ccCCCE
Confidence 5899987 999999999997 44 8999999999877554332 4677899999984 455443 346788
Q ss_pred EEEE
Q 006034 481 VMIM 484 (663)
Q Consensus 481 vv~~ 484 (663)
||-+
T Consensus 71 vih~ 74 (345)
T 2bll_A 71 VLPL 74 (345)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7754
No 321
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.02 E-value=0.18 Score=45.28 Aligned_cols=106 Identities=13% Similarity=0.151 Sum_probs=65.2
Q ss_pred CCCcEEEEcC----CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCC
Q 006034 402 GSEPVVIVGF----GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITS 477 (663)
Q Consensus 402 ~~~~viI~G~----g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~ 477 (663)
..++|.|+|. |++|..+++.|. +.|+++..++.+.+.+ .|.++ +. + ++++ .+.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~----------~~G~~V~~vnp~~~~i-----~G~~~-~~---s---~~el-~~~ 69 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLL----------SKGFEVLPVNPNYDEI-----EGLKC-YR---S---VREL-PKD 69 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHH----------HTTCEEEEECTTCSEE-----TTEEC-BS---S---GGGS-CTT
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHH----------HCCCEEEEeCCCCCeE-----CCeee-cC---C---HHHh-CCC
Confidence 3567999999 999999999997 6788755555443221 12221 11 1 2222 136
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec--ChhhHHHHHHcCCCeEEcCch
Q 006034 478 PKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ--DMMHLLDLKKAGATDAILENA 533 (663)
Q Consensus 478 a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~--~~~~~~~l~~~Gad~vi~p~~ 533 (663)
+|.+++++++ +.-..++..+.+.+++ .++.... +++-.+..++.|+. ++.|+-
T Consensus 70 vDlvii~vp~-~~v~~v~~~~~~~g~~-~i~~~~~~~~~~l~~~a~~~Gi~-~igpnc 124 (138)
T 1y81_A 70 VDVIVFVVPP-KVGLQVAKEAVEAGFK-KLWFQPGAESEEIRRFLEKAGVE-YSFGRC 124 (138)
T ss_dssp CCEEEECSCH-HHHHHHHHHHHHTTCC-EEEECTTSCCHHHHHHHHHHTCE-EECSCC
T ss_pred CCEEEEEeCH-HHHHHHHHHHHHcCCC-EEEEcCccHHHHHHHHHHHCCCE-EEcCCc
Confidence 8999999884 5555555556666655 3443222 44556667777875 667763
No 322
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=92.00 E-value=0.53 Score=48.36 Aligned_cols=107 Identities=9% Similarity=0.046 Sum_probs=67.8
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+. +....+.| -++.+ + .++|+|+
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~---------~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~--~~~~l-~---~~~D~V~ 67 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHT---------SGEYQLVAIYSRKLETAATFASRYQNIQLFDQ--LEVFF-K---SSFDLVY 67 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHH---------TTSEEEEEEECSSHHHHHHHGGGSSSCEEESC--HHHHH-T---SSCSEEE
T ss_pred EEEEEeCCHHHHHHHHHHHh---------CCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCC--HHHHh-C---CCCCEEE
Confidence 58999999999999999972 4466665 789999998877663 44333332 12344 2 4789999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEE
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAI 529 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi 529 (663)
++++++.. ...+..+-+.+ .++++. +.+.+..+. .++.|.-..+
T Consensus 68 i~tp~~~h-~~~~~~al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 68 IASPNSLH-FAQAKAALSAG--KHVILEKPAVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp ECSCGGGH-HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EeCChHHH-HHHHHHHHHcC--CcEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 99987643 33444444444 356654 234443333 3556776554
No 323
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.99 E-value=0.068 Score=55.97 Aligned_cols=70 Identities=16% Similarity=0.333 Sum_probs=57.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHh-cCCCEEEecCC-CHHHHHhcCCCCCc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRK-LGFPILYGDAS-RPAVLLSAGITSPK 479 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~-~~~~L~~a~i~~a~ 479 (663)
++|+|.|. |-+|+.+++.|. +. |++|+++++++++.+.+.+ .+..++.||.+ |++.++++ ++++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~----------~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~-~~~~d 93 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRIL----------ETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH-VKKCD 93 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH-HHHCS
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH-hccCC
Confidence 57999995 999999999997 44 8999999999887666554 67899999999 88888754 24788
Q ss_pred EEEEE
Q 006034 480 AVMIM 484 (663)
Q Consensus 480 ~vv~~ 484 (663)
.||-+
T Consensus 94 ~Vih~ 98 (372)
T 3slg_A 94 VILPL 98 (372)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88753
No 324
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.98 E-value=0.97 Score=45.89 Aligned_cols=129 Identities=14% Similarity=0.159 Sum_probs=75.9
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC--CEEEEeCChHHHHH----HHh----cCC-CEEEecCCCHHHHHhc
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRK----LGF-PILYGDASRPAVLLSA 473 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~--~vvvid~d~~~~~~----~~~----~~~-~vi~GD~~~~~~L~~a 473 (663)
++.|+|.|.+|..++..|. ..+. +++++|.|+++++- +.+ ... .-+.+. +|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~----------~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~~----- 65 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCL----------LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-ADYS----- 65 (294)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-SCGG-----
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-CCHH-----
Confidence 5899999999999999996 4555 89999999998651 222 111 123331 2333
Q ss_pred CCCCCcEEEEEcCC---------H--HHHHHH----HHHHHHhCCCCcEEEEecChhhH--HHH-HHcC--CCeEEcC-c
Q 006034 474 GITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAFPAIPIYARAQDMMHL--LDL-KKAG--ATDAILE-N 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~d---------d--~~n~~~----~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~G--ad~vi~p-~ 532 (663)
.+++||.+|++.+. | ..|..+ +..+++.+|+..++. +.||-+. ..+ +..| .++|+-- .
T Consensus 66 a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv-vsNPvd~~t~~~~k~~g~p~~rviG~gt 144 (294)
T 1oju_A 66 LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV-VTNPMDVMTYIMWKESGKPRNEVFGMGN 144 (294)
T ss_dssp GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE-CSSSHHHHHHHHHHHSCCCTTSEEECSH
T ss_pred HhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-eCCcchHHHHHHHHhcCCCHHHEeeccc
Confidence 45789988887642 2 345443 344666688855444 4466443 233 3344 3456655 3
Q ss_pred hHHHHHHHHHHHHhcCCCH
Q 006034 533 AETSLQLGSKLLKGFGVMS 551 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~ 551 (663)
.+-..++-..+- .++++|
T Consensus 145 ~LD~~R~~~~la-~l~v~~ 162 (294)
T 1oju_A 145 QLDSQRLKERLY-NAGARN 162 (294)
T ss_dssp HHHHHHHHHHHH-HTTCBS
T ss_pred ccHHHHHHHHHH-HhCCCc
Confidence 333344444444 566655
No 325
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.98 E-value=0.18 Score=50.05 Aligned_cols=87 Identities=9% Similarity=0.088 Sum_probs=54.2
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCC----CCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG----WPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSP 478 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~----~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a 478 (663)
.+|.|+|.|++|..+++.|. +.| ++|.+.|+++++ .+..+ .++. +.+ +++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~----------~~g~~~~~~v~~~~~~~~~------~g~~~----~~~~~~~~-----~~~ 59 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIA----------NANIIKKENLFYYGPSKKN------TTLNY----MSSNEELA-----RHC 59 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHH----------HHTSSCGGGEEEECSSCCS------SSSEE----CSCHHHHH-----HHC
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCCCCCeEEEEeCCccc------CceEE----eCCHHHHH-----hcC
Confidence 36999999999999999997 566 789999999876 23322 1232 333 367
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecChhh
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMH 516 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~~~ 516 (663)
|.|++++.++.. ..+...++...++..++.-.+.-..
T Consensus 60 D~vi~~v~~~~~-~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 60 DIIVCAVKPDIA-GSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp SEEEECSCTTTH-HHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred CEEEEEeCHHHH-HHHHHHHHHhcCCCEEEEECCCCCH
Confidence 888888886432 2222223332244345555554433
No 326
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=91.96 E-value=0.11 Score=52.16 Aligned_cols=72 Identities=13% Similarity=0.044 Sum_probs=53.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c-CCCEEEecCCCHHHHHhc----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-GFPILYGDASRPAVLLSA---- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~-~~~vi~GD~~~~~~L~~a---- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 30 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLL----------EAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHH
Confidence 46788876 789999999998 789999999999987665443 1 355678999998876543
Q ss_pred --CCCCCcEEEEEc
Q 006034 474 --GITSPKAVMIMY 485 (663)
Q Consensus 474 --~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 100 ~~~~g~iD~lvnnA 113 (276)
T 2b4q_A 100 GELSARLDILVNNA 113 (276)
T ss_dssp HHHCSCCSEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 123678776654
No 327
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.95 E-value=0.16 Score=50.33 Aligned_cols=73 Identities=8% Similarity=-0.044 Sum_probs=53.9
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCC-CCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhcC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNT-VGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~-~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a~ 474 (663)
.++++|.|. |-+|+.+++.|. + .|++|+++++++++.+...+ ....++.+|.+|++.++++-
T Consensus 4 ~k~vlITGasggIG~~~a~~L~----------~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 73 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLC----------RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR 73 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH----------HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH----------HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence 356778875 789999999997 6 89999999999887654432 24678899999988776531
Q ss_pred ------CCCCcEEEEEc
Q 006034 475 ------ITSPKAVMIMY 485 (663)
Q Consensus 475 ------i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 74 ~~~~~~~g~id~li~~A 90 (276)
T 1wma_A 74 DFLRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHHHSSEEEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 12567776543
No 328
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=91.94 E-value=1.1 Score=39.80 Aligned_cols=97 Identities=14% Similarity=0.106 Sum_probs=65.1
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCcEE
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIY 508 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~ii 508 (663)
..+.++.+||.|+...+.+. +.|+.+... .+-.+.++...-...|.+++-..-. ......+..+|+.+|+++++
T Consensus 5 ~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPILNSLKRLIKRLGCNIITF-TSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CSCCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHHcCCeEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 35678999999988765544 356766632 2335566666666789888766532 34566788889989998988
Q ss_pred EEecChh--hHHHHHHcC-CCeEEcC
Q 006034 509 ARAQDMM--HLLDLKKAG-ATDAILE 531 (663)
Q Consensus 509 a~~~~~~--~~~~l~~~G-ad~vi~p 531 (663)
......+ ......+.| ++.++..
T Consensus 84 ~ls~~~~~~~~~~~~~~g~~~~~l~k 109 (154)
T 2rjn_A 84 VISGYADAQATIDAVNRGKISRFLLK 109 (154)
T ss_dssp EEECGGGHHHHHHHHHTTCCSEEEES
T ss_pred EEecCCCHHHHHHHHhccchheeeeC
Confidence 8776554 444555676 8766544
No 329
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=91.92 E-value=0.16 Score=50.15 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=53.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 7 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLL----------GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45777775 789999999998 789999999999988776554 2456788999999876543
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~g~id~lv~~A 88 (253)
T 1hxh_A 77 RLGTLNVLVNNA 88 (253)
T ss_dssp HHCSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123457666543
No 330
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.91 E-value=0.18 Score=50.51 Aligned_cols=71 Identities=17% Similarity=0.116 Sum_probs=54.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++|+++++.+...+ .....+.+|.+|++..+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLA----------RAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 46788876 679999999998 789999999999988766553 3577889999999876653
Q ss_pred CCCCCcEEEEE
Q 006034 474 GITSPKAVMIM 484 (663)
Q Consensus 474 ~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 82 ~~g~id~lv~n 92 (271)
T 3tzq_B 82 TFGRLDIVDNN 92 (271)
T ss_dssp HHSCCCEEEEC
T ss_pred HcCCCCEEEEC
Confidence 11256766654
No 331
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.90 E-value=0.11 Score=54.14 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~v 481 (663)
.+++.|+|+|++|+.+++.|. ..|.+|++.|++++. +...+.+... ++. +.+ +++|.+
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~~~l-----~~aDvV 208 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAK----------GFNMRILYYSRTRKE-EVERELNAEF-----KPLEDLL-----RESDFV 208 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCH-HHHHHHCCEE-----CCHHHHH-----HHCSEE
T ss_pred CCEEEEEccCHHHHHHHHHHH----------hCCCEEEEECCCcch-hhHhhcCccc-----CCHHHHH-----hhCCEE
Confidence 357999999999999999997 789999999999887 5454445422 233 334 367888
Q ss_pred EEEcCCHHH--HHHHHHHHHHhCCC
Q 006034 482 MIMYTDKKR--TIEAVQRLRLAFPA 504 (663)
Q Consensus 482 v~~~~dd~~--n~~~~~~~r~~~~~ 504 (663)
+++++.+.. ++.-....+.+.|+
T Consensus 209 il~vp~~~~t~~~i~~~~~~~mk~~ 233 (334)
T 2dbq_A 209 VLAVPLTRETYHLINEERLKLMKKT 233 (334)
T ss_dssp EECCCCCTTTTTCBCHHHHHHSCTT
T ss_pred EECCCCChHHHHhhCHHHHhcCCCC
Confidence 888876542 22212334455555
No 332
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.90 E-value=0.08 Score=55.73 Aligned_cols=72 Identities=21% Similarity=0.113 Sum_probs=56.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHHH-HHHH-hcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVV-KESR-KLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~~-~~~~-~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.+|+|.|. |-+|+.+++.|. +.| ++|++++++++.. +.+. ..+..++.||.+|++.++++ ++++|
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~-~~~~d 101 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLL----------ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL-QDEYD 101 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC-CSCCS
T ss_pred CEEEEECCccHHHHHHHHHHH----------HcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH-hhCCC
Confidence 46999996 999999999997 678 9999999886542 1121 23567889999999998875 45889
Q ss_pred EEEEEcC
Q 006034 480 AVMIMYT 486 (663)
Q Consensus 480 ~vv~~~~ 486 (663)
.||-+..
T Consensus 102 ~Vih~A~ 108 (377)
T 2q1s_A 102 YVFHLAT 108 (377)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8886654
No 333
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=91.90 E-value=0.19 Score=50.52 Aligned_cols=73 Identities=15% Similarity=0.033 Sum_probs=54.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++|++++..+...+ .....+.+|.+|++..+++
T Consensus 28 k~vlVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFA----------KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45777776 679999999998 789999999999998777654 2456788999999876543
Q ss_pred CCCCCcEEEEEcC
Q 006034 474 GITSPKAVMIMYT 486 (663)
Q Consensus 474 ~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 98 ~~g~iD~lv~nAg 110 (277)
T 4dqx_A 98 KWGRVDVLVNNAG 110 (277)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1125677765543
No 334
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.89 E-value=0.18 Score=51.47 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=54.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a~-- 474 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++.++++-
T Consensus 32 k~vlVTGas~gIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFA----------RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 46888886 668999999998 789999999999988766543 2 3567889999998776531
Q ss_pred ----CCCCcEEEEEc
Q 006034 475 ----ITSPKAVMIMY 485 (663)
Q Consensus 475 ----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 102 ~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHHSSCSEEEECC
T ss_pred HHHhCCCCCEEEECC
Confidence 13567776554
No 335
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=91.86 E-value=0.65 Score=47.90 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=69.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCC--CC-EEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WP-FVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~--~~-vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
++.|+|+|.+|+..++.|.+ ..+ .+ +-+.|+|+++.+.+.+ .+.+-.+.|. ++.|++ .+.|+
T Consensus 4 rigiiG~G~ig~~~~~~l~~---------~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~--~~ll~~---~~vD~ 69 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQT---------LPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSY--EELAKD---PNVEV 69 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTT---------SCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSH--HHHHHC---TTCCE
T ss_pred EEEEECchHHHHHHHHHHHh---------CCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCH--HHHhcC---CCCCE
Confidence 68999999999999999962 232 34 4456999999887765 4654344332 344543 57899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHcCCCeEE
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 529 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~Gad~vi 529 (663)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|.-..+
T Consensus 70 V~i~tp~~~H-~~~~~~al~~G--khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 70 AYVGTQHPQH-KAAVMLCLAAG--KAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp EEECCCGGGH-HHHHHHHHHTT--CEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCcHHH-HHHHHHHHhcC--CEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 9999988643 44455555554 367764 4454444433 555665444
No 336
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.85 E-value=0.46 Score=49.70 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=63.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCCh-------------------HHHHH----HHhc--C
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVVKE----SRKL--G 456 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~-------------------~~~~~----~~~~--~ 456 (663)
+.||+|+|.|..|..+++.|. ..|. ++.++|.|. .+++. +++. .
T Consensus 118 ~~~VlvvG~GglGs~va~~La----------~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 187 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILA----------TSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE 187 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CCeEEEECCCHHHHHHHHHHH----------hCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence 568999999999999999997 5665 699999884 12322 3321 2
Q ss_pred --CCEEEecCCCHHHHHhcCCCCCcEEEEEcCCHH-HHHHHHHHHHHhCC
Q 006034 457 --FPILYGDASRPAVLLSAGITSPKAVMIMYTDKK-RTIEAVQRLRLAFP 503 (663)
Q Consensus 457 --~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd~-~n~~~~~~~r~~~~ 503 (663)
...+..+.++.+.+.+ ++++|.||.++++.+ ....+...+++.+.
T Consensus 188 v~v~~~~~~i~~~~~~~~--~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~ 235 (353)
T 3h5n_A 188 ISVSEIALNINDYTDLHK--VPEADIWVVSADHPFNLINWVNKYCVRANQ 235 (353)
T ss_dssp SEEEEEECCCCSGGGGGG--SCCCSEEEECCCCSTTHHHHHHHHHHHTTC
T ss_pred CeEEEeecccCchhhhhH--hccCCEEEEecCChHHHHHHHHHHHHHhCC
Confidence 3345566666554555 899999888887766 66666677787763
No 337
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.85 E-value=0.079 Score=53.44 Aligned_cols=106 Identities=11% Similarity=0.110 Sum_probs=64.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+++.|+|.|.+|+.+++.|. +.|.+|.+.|+++++.+.+.+. +.+ +..+ .+++ -++++|.+|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~----------~~g~~V~v~~r~~~~~~~l~~~-~g~---~~~~--~~~~-~~~~aDiVi~ 192 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALV----------KEGAKVFLWNRTKEKAIKLAQK-FPL---EVVN--SPEE-VIDKVQVIVN 192 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSSHHHHHHHTTT-SCE---EECS--CGGG-TGGGCSEEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHH-cCC---eeeh--hHHh-hhcCCCEEEE
Confidence 47999999999999999997 5677999999999998887653 122 1121 1111 2468999999
Q ss_pred EcCCHHH-HHHHHHHHHHhCCCCcEEEEec-ChhhHHHHHHcCCC
Q 006034 484 MYTDKKR-TIEAVQRLRLAFPAIPIYARAQ-DMMHLLDLKKAGAT 526 (663)
Q Consensus 484 ~~~dd~~-n~~~~~~~r~~~~~~~iia~~~-~~~~~~~l~~~Gad 526 (663)
+++.... +..-......+.++.-++-... ..+..+..++.|+.
T Consensus 193 atp~~~~~~~~~~i~~~~l~~g~~viDv~~~~t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 193 TTSVGLKDEDPEIFNYDLIKKDHVVVDIIYKETKLLKKAKEKGAK 237 (275)
T ss_dssp CSSTTSSTTCCCSSCGGGCCTTSEEEESSSSCCHHHHHHHHTTCE
T ss_pred eCCCCCCCCCCCCCCHHHcCCCCEEEEcCCChHHHHHHHHHCcCE
Confidence 9987531 1000001122344423333332 22334556677874
No 338
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=91.83 E-value=0.23 Score=50.05 Aligned_cols=72 Identities=10% Similarity=0.096 Sum_probs=54.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |.+|+.+++.|. +.|++|++++++++..+.+.+ . ...++.+|.+|++.++++
T Consensus 45 k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~ 114 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLA----------KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHT----------TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence 46788875 789999999997 789999999999887655432 2 345688999999887654
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 115 ~~~~~~~id~li~~A 129 (285)
T 2c07_A 115 ILTEHKNVDILVNNA 129 (285)
T ss_dssp HHHHCSCCCEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 224678777654
No 339
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=91.82 E-value=0.13 Score=54.13 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCC-EEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~-vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~ 479 (663)
..+++.|+|+|++|+.+++.|. ..|.+ |.+.|++++..+...+.|... ..+. +.+ +++|
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~----------~~G~~~V~~~d~~~~~~~~~~~~g~~~----~~~l~ell-----~~aD 223 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLV----------PFNPKELLYYDYQALPKDAEEKVGARR----VENIEELV-----AQAD 223 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHG----------GGCCSEEEEECSSCCCHHHHHHTTEEE----CSSHHHHH-----HTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHH----------hCCCcEEEEECCCccchhHHHhcCcEe----cCCHHHHH-----hcCC
Confidence 3457999999999999999997 78998 999998876655555544321 1233 333 3688
Q ss_pred EEEEEcCCHH
Q 006034 480 AVMIMYTDKK 489 (663)
Q Consensus 480 ~vv~~~~dd~ 489 (663)
.|+.+.+..+
T Consensus 224 vV~l~~P~t~ 233 (364)
T 2j6i_A 224 IVTVNAPLHA 233 (364)
T ss_dssp EEEECCCCST
T ss_pred EEEECCCCCh
Confidence 8888887643
No 340
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=91.82 E-value=0.18 Score=51.05 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=54.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. +.|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 27 k~vlITGasggiG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 96 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLS----------SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 96 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH
Confidence 46788876 789999999998 789999999999987655432 2366789999999876543
Q ss_pred ----CCCCCcEEEEEcC
Q 006034 474 ----GITSPKAVMIMYT 486 (663)
Q Consensus 474 ----~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 97 ~~~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 97 ELIKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHHHTCSCSEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1235687776543
No 341
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.81 E-value=0.17 Score=52.05 Aligned_cols=73 Identities=11% Similarity=0.007 Sum_probs=55.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c----CCCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L----GFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~----~~~vi~GD~~~~~~L~~a- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++.++++
T Consensus 9 k~vlVTGas~gIG~~la~~l~----------~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~ 78 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLL----------NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence 46888886 789999999998 789999999999988765543 1 467789999999877654
Q ss_pred -----CCCCCcEEEEEcC
Q 006034 474 -----GITSPKAVMIMYT 486 (663)
Q Consensus 474 -----~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 79 ~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHHHTCCEEEEEECCC
T ss_pred HHHHHhCCCCCEEEECCC
Confidence 1235677766554
No 342
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=91.81 E-value=0.18 Score=51.14 Aligned_cols=73 Identities=8% Similarity=0.003 Sum_probs=54.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----------cCCCEEEecCCCHHHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LGFPILYGDASRPAVLL 471 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----------~~~~vi~GD~~~~~~L~ 471 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++
T Consensus 19 k~vlVTGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~ 88 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELL----------ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence 56788875 789999999998 789999999999887655432 13567889999998776
Q ss_pred hcC------CCCCcEEEEEcC
Q 006034 472 SAG------ITSPKAVMIMYT 486 (663)
Q Consensus 472 ~a~------i~~a~~vv~~~~ 486 (663)
++- ..+.|.+|-..+
T Consensus 89 ~~~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 89 NLVKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 531 135787776543
No 343
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=91.79 E-value=0.14 Score=50.53 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=54.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+...+ .....+.+|.+|++-.+++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLA----------ADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46788876 679999999998 789999999999998776654 3456778999999877653
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 77 ~~g~id~lv~nA 88 (247)
T 3rwb_A 77 LTGGIDILVNNA 88 (247)
T ss_dssp HHSCCSEEEECC
T ss_pred HCCCCCEEEECC
Confidence 112567776544
No 344
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=91.79 E-value=0.15 Score=51.12 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=54.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-.+++
T Consensus 29 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALA----------GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 45667676 679999999998 789999999999998777654 3578899999999877653
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 99 ~~g~iD~lVnnA 110 (272)
T 4dyv_A 99 KFGRVDVLFNNA 110 (272)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 112567666543
No 345
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=91.78 E-value=0.19 Score=50.34 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=53.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++-++++
T Consensus 22 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELA----------GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 46788875 789999999998 789999999999987655432 2 356688999999877543
Q ss_pred ---CC-CCCcEEEEEc
Q 006034 474 ---GI-TSPKAVMIMY 485 (663)
Q Consensus 474 ---~i-~~a~~vv~~~ 485 (663)
.. .+.|.+|-..
T Consensus 92 ~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHTTSCCCEEEECC
T ss_pred HHHHcCCCCcEEEECC
Confidence 12 4677766554
No 346
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.78 E-value=0.44 Score=44.94 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=54.9
Q ss_pred CCCcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHH---Hh-cCCC
Q 006034 402 GSEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVL---LS-AGIT 476 (663)
Q Consensus 402 ~~~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L---~~-a~i~ 476 (663)
..++++|.| .|.+|+.+++.+. ..|.+|+++|+++++.+.+++.+...+. |.++++.. .+ .+-.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~----------~~G~~V~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAK----------MIGARIYTTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGY 106 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH----------HHTCEEEEEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTC
T ss_pred CCCEEEEeeCCChHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHcCCCEEe-eCCcHHHHHHHHHHhCCC
Confidence 346799999 5999999999997 6789999999999998888776655433 66654432 22 2224
Q ss_pred CCcEEEEEcCC
Q 006034 477 SPKAVMIMYTD 487 (663)
Q Consensus 477 ~a~~vv~~~~d 487 (663)
..|.++-+.+.
T Consensus 107 ~~D~vi~~~g~ 117 (198)
T 1pqw_A 107 GVDVVLNSLAG 117 (198)
T ss_dssp CEEEEEECCCT
T ss_pred CCeEEEECCch
Confidence 68988877664
No 347
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=91.77 E-value=0.17 Score=50.65 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=52.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 22 k~~lVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLA----------EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 45777775 789999999998 789999999999887654432 1345678999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 92 ~~~~~~g~iD~lvnnA 107 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAA 107 (267)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123567776543
No 348
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.76 E-value=0.058 Score=57.29 Aligned_cols=49 Identities=18% Similarity=0.263 Sum_probs=41.8
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPIL 460 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi 460 (663)
...+++|+|+|++|+.+++.+. ..|.+|++.|.++++.+.+.+.|..++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~----------~~Ga~V~~~d~~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAK----------RLGAVVMATDVRAATKEQVESLGGKFI 219 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeEE
Confidence 4568999999999999999997 788899999999998888877665543
No 349
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=91.71 E-value=0.19 Score=50.07 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=53.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--------cCCCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--------LGFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--------~~~~vi~GD~~~~~~L~~a- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++-++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALL----------LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 77 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence 46888886 789999999998 789999999999887654322 1356789999999877653
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 78 ~~~~~~~g~id~lv~~A 94 (267)
T 2gdz_A 78 RKVVDHFGRLDILVNNA 94 (267)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 123568776654
No 350
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.71 E-value=0.14 Score=51.09 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=53.0
Q ss_pred CCCCcEEEE-c-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH----hcC--CCEEEecCCCHHHHHh
Q 006034 401 EGSEPVVIV-G-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLS 472 (663)
Q Consensus 401 ~~~~~viI~-G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~----~~~--~~vi~GD~~~~~~L~~ 472 (663)
+.+++++++ | .+-+|+.+++.|. ++|.+|++.|+|+++.++.. +.+ ...+.+|.+|++-.++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la----------~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~ 75 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLA----------AAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEA 75 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHH----------HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence 456666555 4 4669999999998 89999999999998765543 344 4456799999887654
Q ss_pred c------CCCCCcEEEEE
Q 006034 473 A------GITSPKAVMIM 484 (663)
Q Consensus 473 a------~i~~a~~vv~~ 484 (663)
+ ...+-|.+|-.
T Consensus 76 ~~~~~~~~~G~iDiLVNN 93 (255)
T 4g81_D 76 AFSKLDAEGIHVDILINN 93 (255)
T ss_dssp HHHHHHHTTCCCCEEEEC
T ss_pred HHHHHHHHCCCCcEEEEC
Confidence 2 34466766543
No 351
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=91.69 E-value=0.84 Score=39.85 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=63.8
Q ss_pred CCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcC--CCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEEE
Q 006034 437 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAG--ITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 437 ~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~--i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~iia 509 (663)
.++.++|.|+...+.+. +.++.+...+ +..+.++... -.+.|.+++-..- +......+..+|+.+|+++++.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 82 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTAS-SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVII 82 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeC-CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 56889998887655444 3566665443 2344444433 4578888777653 2345667888899999989888
Q ss_pred EecCh--hhHHHHHHcCCCeEEcCc
Q 006034 510 RAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 510 ~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
...+. +......+.|++.++...
T Consensus 83 ls~~~~~~~~~~~~~~g~~~~l~kp 107 (143)
T 3jte_A 83 LTGHGDLDNAILAMKEGAFEYLRKP 107 (143)
T ss_dssp EECTTCHHHHHHHHHTTCSEEEESS
T ss_pred EECCCCHHHHHHHHHhCcceeEeCC
Confidence 77654 446677889999766554
No 352
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.67 E-value=0.13 Score=51.13 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=54.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+.+.+ . ...++.+|.+|++.++++
T Consensus 30 k~vlITGas~gIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLG----------SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 46777775 789999999998 789999999999988766543 2 356788999999877653
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 100 ~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 113567776554
No 353
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=91.67 E-value=0.065 Score=53.02 Aligned_cols=70 Identities=17% Similarity=0.195 Sum_probs=53.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhc--CCCCCcE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA--GITSPKA 480 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a--~i~~a~~ 480 (663)
+.++|-|. +-+|+.+++.|. ++|.+|++.|+|++..+...+.....+..|.+|++..+++ ...+-|.
T Consensus 12 K~alVTGas~GIG~aia~~la----------~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFA----------ELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 45666665 569999999998 8999999999999887655555677888999998876553 3456676
Q ss_pred EEE
Q 006034 481 VMI 483 (663)
Q Consensus 481 vv~ 483 (663)
+|-
T Consensus 82 LVN 84 (242)
T 4b79_A 82 LVN 84 (242)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 354
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.65 E-value=0.16 Score=49.92 Aligned_cols=72 Identities=11% Similarity=0.012 Sum_probs=54.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ . ...++.+|.+|++.++++
T Consensus 6 k~vlITGas~gIG~~~a~~l~----------~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALA----------SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 46777776 678999999998 789999999999988665543 2 356788999999876643
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 76 ~~~~~~~id~li~~A 90 (247)
T 3lyl_A 76 IKAENLAIDILVNNA 90 (247)
T ss_dssp HHHTTCCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 233568776654
No 355
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.65 E-value=0.24 Score=49.25 Aligned_cols=72 Identities=14% Similarity=0.043 Sum_probs=53.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++..+++
T Consensus 11 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFA----------RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHH
Confidence 45666665 779999999998 789999999999988665443 2356789999999877653
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 81 ~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 81 RAVEEFGGIDVVCANA 96 (262)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 123567776554
No 356
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=91.64 E-value=0.85 Score=38.34 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=61.6
Q ss_pred CCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCcEEEEe
Q 006034 437 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYARA 511 (663)
Q Consensus 437 ~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~iia~~ 511 (663)
.++.++|.|+...+.++ +.|+.++.--.+..+.++...-.+.|.+++-.+-+ ..-...+...|+.+|+.+++...
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS 82 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe
Confidence 46888998887654443 35776543222334555544445678887766543 33456777888888888887776
Q ss_pred cC--hhhHHHHHHcCCCeEEcCc
Q 006034 512 QD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 512 ~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
.. .+......+.|++..+.-.
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP 105 (120)
T 1tmy_A 83 AMGQQAMVIEAIKAGAKDFIVKP 105 (120)
T ss_dssp CTTCHHHHHHHHHTTCCEEEESS
T ss_pred CCCCHHHHHHHHHhCcceeEeCC
Confidence 54 4455667789999776543
No 357
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.64 E-value=0.11 Score=55.62 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH---HHH---------------HhcCCCEEEec
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV---KES---------------RKLGFPILYGD 463 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~---~~~---------------~~~~~~vi~GD 463 (663)
.++|+|.|. |-+|+.+++.|. +.|++|++++++++.. +.+ ...+..++.||
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~D 138 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQ----------GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGD 138 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHT----------TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEC
T ss_pred CCEEEEecCCcHHHHHHHHHHH----------cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCC
Confidence 457999996 999999999997 7899999999988722 111 12568899999
Q ss_pred CCCHHHHHhcCCCCCcEEEEEc
Q 006034 464 ASRPAVLLSAGITSPKAVMIMY 485 (663)
Q Consensus 464 ~~~~~~L~~a~i~~a~~vv~~~ 485 (663)
.+|++.++ ...+.|.|+-+.
T Consensus 139 l~d~~~l~--~~~~~d~Vih~A 158 (427)
T 4f6c_A 139 FECMDDVV--LPENMDTIIHAG 158 (427)
T ss_dssp C---CCCC--CSSCCSEEEECC
T ss_pred CCCcccCC--CcCCCCEEEECC
Confidence 99988887 667899887654
No 358
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=91.61 E-value=0.2 Score=50.60 Aligned_cols=72 Identities=19% Similarity=0.115 Sum_probs=53.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. +-+|+.+++.|. +.|++|++++++++..+...+ . ...++.+|.+|++-.+++
T Consensus 29 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALA----------ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 46778876 679999999998 789999999999988766553 1 355788999999766543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 99 ~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 99 LVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 113567666543
No 359
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=91.61 E-value=0.15 Score=50.67 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=53.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a~-- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++-
T Consensus 15 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFA----------GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 45777765 789999999998 789999999999887655432 2 3567889999998776541
Q ss_pred C-----CCCcEEEEEc
Q 006034 475 I-----TSPKAVMIMY 485 (663)
Q Consensus 475 i-----~~a~~vv~~~ 485 (663)
+ .+.|.+|-..
T Consensus 85 ~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 85 VSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHTTCCSEEEEEC
T ss_pred HHHHhCCCCcEEEECC
Confidence 1 4678777654
No 360
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=91.60 E-value=0.1 Score=51.37 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=53.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCC-hHHHHHHHh----c--CCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-PSVVKESRK----L--GFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d-~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a~- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++ +++.+.+.+ . ...++.+|.+|++.++++=
T Consensus 8 k~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFA----------RAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVD 77 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 45777775 889999999998 789999999998 666554332 2 3567899999998776541
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 78 ~~~~~~g~id~vi~~A 93 (258)
T 3afn_B 78 EFVAKFGGIDVLINNA 93 (258)
T ss_dssp HHHHHHSSCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12678777654
No 361
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=91.58 E-value=1.9 Score=37.41 Aligned_cols=97 Identities=10% Similarity=0.021 Sum_probs=67.3
Q ss_pred CCCCEEEEeCChHHHHHHH----h-cCCCEEEecCCCHHHHHhcCC-CCCcEEEEEcCC--HHHHHHHHHHHHH--hCCC
Q 006034 435 VGWPFVAFDLNPSVVKESR----K-LGFPILYGDASRPAVLLSAGI-TSPKAVMIMYTD--KKRTIEAVQRLRL--AFPA 504 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~----~-~~~~vi~GD~~~~~~L~~a~i-~~a~~vv~~~~d--d~~n~~~~~~~r~--~~~~ 504 (663)
...++.++|.|+...+.++ + .++.+..- .+-.+.++...- .+.|.+++-.+- +..-...+..+|+ .+++
T Consensus 3 ~~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~~-~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~ 81 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREKTKIIFDNIGEYDFIEV-ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTAN 81 (140)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHHCCCEEEEE-CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTT
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhccCccEEEE-CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCC
Confidence 3467899999988755443 4 57777633 233456666555 778988776553 4566778888998 7888
Q ss_pred CcEEEEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 505 IPIYARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 505 ~~iia~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
++++..... .+......+.|++.++.-.
T Consensus 82 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP 111 (140)
T 3lua_A 82 TPVIIATKSDNPGYRHAALKFKVSDYILKP 111 (140)
T ss_dssp CCEEEEESCCCHHHHHHHHHSCCSEEEESS
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCCEEEECC
Confidence 898877754 4666777899999876543
No 362
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.57 E-value=0.13 Score=52.31 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=52.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c-----CCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-----GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~-----~~~vi~GD~~~~~~L~~a 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 27 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~ 96 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFA----------KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 96 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHH
Confidence 45666665 789999999998 789999999999987655432 2 356788999999876543
Q ss_pred ------CCCCCcEEEEEc
Q 006034 474 ------GITSPKAVMIMY 485 (663)
Q Consensus 474 ------~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 97 ~~~~~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 97 INTTLAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 123567766543
No 363
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.56 E-value=0.36 Score=50.76 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=59.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |..+++..++.. +.+|.+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak----------~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~-~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAH----------AMGAHVVAFTTSEAKREAAKALGADEVV-NSRNADEMAAHL-KSFDFI 261 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHTCSEEE-ETTCHHHHHTTT-TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCcEEe-ccccHHHHHHhh-cCCCEE
Confidence 3468999999999999999886 6788999999999999988887766443 566666666554 678988
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
+-+++.+
T Consensus 262 id~~g~~ 268 (369)
T 1uuf_A 262 LNTVAAP 268 (369)
T ss_dssp EECCSSC
T ss_pred EECCCCH
Confidence 8887754
No 364
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.56 E-value=0.56 Score=51.22 Aligned_cols=41 Identities=20% Similarity=0.477 Sum_probs=37.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK 454 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~ 454 (663)
++|.|+|.|.+|..+|+.|. +.|++|++.|.|++.++.+.+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la----------~aG~~V~l~D~~~e~l~~~~~ 46 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA----------SHGHQVLLYDISAEALTRAID 46 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHH
Confidence 57999999999999999998 789999999999999887653
No 365
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.55 E-value=0.16 Score=53.47 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=49.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCC-------CCEEEEeCChH-----HHHHHHhcCCCE-----------E
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-------WPFVAFDLNPS-----VVKESRKLGFPI-----------L 460 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~-------~~vvvid~d~~-----~~~~~~~~~~~v-----------i 460 (663)
.+|.|+|.|.+|..++..|. +.| ++|.++|++++ +.+.+.+.+... +
T Consensus 22 ~kI~iIGaG~mG~alA~~L~----------~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 91 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG----------TNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNI 91 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH----------HHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTE
T ss_pred CEEEEECcCHHHHHHHHHHH----------HcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCe
Confidence 46999999999999999997 567 89999999998 887776532110 1
Q ss_pred EecCCCH-HHHHhcCCCCCcEEEEEcCCH
Q 006034 461 YGDASRP-AVLLSAGITSPKAVMIMYTDK 488 (663)
Q Consensus 461 ~GD~~~~-~~L~~a~i~~a~~vv~~~~dd 488 (663)
... +|. +. ++++|.|++++.+.
T Consensus 92 ~~~-~~~~ea-----~~~aDvVilav~~~ 114 (375)
T 1yj8_A 92 VAH-SDLASV-----INDADLLIFIVPCQ 114 (375)
T ss_dssp EEE-SSTHHH-----HTTCSEEEECCCHH
T ss_pred EEE-CCHHHH-----HcCCCEEEEcCCHH
Confidence 111 122 22 35789999999863
No 366
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=91.53 E-value=0.027 Score=56.21 Aligned_cols=68 Identities=12% Similarity=0.143 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++++|.|. |.+|+.+++.|. +.|++|++++++++... ..+..++.+|.+|++.++++ +++.|.||
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 68 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLG----------TLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDL-VKDCDGII 68 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGG----------GTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHH-HTTCSEEE
T ss_pred ceEEEECCCCHHHHHHHHHHH----------hCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHH-HcCCCEEE
Confidence 36899997 999999999997 67899999999876321 13567888999999988765 45689887
Q ss_pred EEc
Q 006034 483 IMY 485 (663)
Q Consensus 483 ~~~ 485 (663)
-+.
T Consensus 69 ~~a 71 (267)
T 3ay3_A 69 HLG 71 (267)
T ss_dssp ECC
T ss_pred ECC
Confidence 664
No 367
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=91.53 E-value=0.16 Score=50.27 Aligned_cols=71 Identities=10% Similarity=-0.015 Sum_probs=51.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH----hcC--CCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~----~~~--~~vi~GD~~~~~~L~~a--- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+... +.+ ...+.+|.+|++.++++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLA----------QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 45777775 789999999998 78999999999988765433 223 45678999998876543
Q ss_pred ---CCCCCcEEEEE
Q 006034 474 ---GITSPKAVMIM 484 (663)
Q Consensus 474 ---~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 85 ~~~~~g~iD~lv~~ 98 (260)
T 2zat_A 85 AVNLHGGVDILVSN 98 (260)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 11356766654
No 368
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=91.52 E-value=0.27 Score=49.35 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=53.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+...+ .....+.+|.+|++-.+++
T Consensus 28 k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 97 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFM----------RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD 97 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 46777776 569999999998 789999999999887554432 2456788999999766543
Q ss_pred ----CCCCCcEEEEEcC
Q 006034 474 ----GITSPKAVMIMYT 486 (663)
Q Consensus 474 ----~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 98 ~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 98 QALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCc
Confidence 1236687765543
No 369
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=91.49 E-value=0.14 Score=51.30 Aligned_cols=72 Identities=7% Similarity=0.012 Sum_probs=55.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhcC-----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a~----- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ ....++.+|.+|++.++++-
T Consensus 6 k~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAV----------AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 56778776 789999999998 789999999999988777654 35678899999998776531
Q ss_pred -CCCCcEEEEEc
Q 006034 475 -ITSPKAVMIMY 485 (663)
Q Consensus 475 -i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 76 ~~g~id~lv~~A 87 (281)
T 3m1a_A 76 RYGRVDVLVNNA 87 (281)
T ss_dssp HHSCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 12567666544
No 370
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=91.49 E-value=0.25 Score=48.72 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=53.6
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecC--CCHHHHHh
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDA--SRPAVLLS 472 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~--~~~~~L~~ 472 (663)
.+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++..|. +|++..++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYA----------RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQ 81 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHH
Confidence 346777876 678999999998 789999999999988665543 1567889999 88876543
Q ss_pred c------CCCCCcEEEEEc
Q 006034 473 A------GITSPKAVMIMY 485 (663)
Q Consensus 473 a------~i~~a~~vv~~~ 485 (663)
+ ...+.|.+|-..
T Consensus 82 ~~~~~~~~~g~id~lv~nA 100 (252)
T 3f1l_A 82 LAQRIAVNYPRLDGVLHNA 100 (252)
T ss_dssp HHHHHHHHCSCCSEEEECC
T ss_pred HHHHHHHhCCCCCEEEECC
Confidence 2 223667766543
No 371
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=91.49 E-value=1.8 Score=36.66 Aligned_cols=96 Identities=20% Similarity=0.090 Sum_probs=64.2
Q ss_pred CCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCcEEEE
Q 006034 436 GWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 436 ~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~iia~ 510 (663)
+.++.++|.|+...+.++ +.++.+... .+-.+.++...-.+.|.+++-.+-. ..-...+..+|+.+|+++++..
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~-~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 81 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVI 81 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCcEEEEe-CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 357899999988755443 357766543 3345566665556788777765432 3345677788888888888877
Q ss_pred ecCh--hhHHHHHHcCCCeEEcCc
Q 006034 511 AQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 511 ~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
.... +......+.|++..+.-.
T Consensus 82 s~~~~~~~~~~~~~~ga~~~l~Kp 105 (126)
T 1dbw_A 82 TGHGDVPMAVEAMKAGAVDFIEKP 105 (126)
T ss_dssp ECTTCHHHHHHHHHTTCSEEEESS
T ss_pred ECCCCHHHHHHHHHhCHHHheeCC
Confidence 6543 456677889998876543
No 372
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=91.49 E-value=0.24 Score=50.93 Aligned_cols=108 Identities=18% Similarity=0.131 Sum_probs=67.8
Q ss_pred cEEEEcCCcchH-HHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~-~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
++.|+|+|++|+ ..++.|.+ ..+.++++.|.|+++.+.+.+ .+....+.| +.+.| . .++|+|+
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~---------~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~--~~~~l-~---~~~D~V~ 68 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQ---------WPDIELVLCTRNPKVLGTLATRYRVSATCTD--YRDVL-Q---YGVDAVM 68 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTT---------STTEEEEEECSCHHHHHHHHHHTTCCCCCSS--TTGGG-G---GCCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHh---------CCCceEEEEeCCHHHHHHHHHHcCCCccccC--HHHHh-h---cCCCEEE
Confidence 689999999998 48898862 457788899999999887765 454321222 23444 2 5789999
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhH----HHHHHcCCCeEEc
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHL----LDLKKAGATDAIL 530 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~----~~l~~~Gad~vi~ 530 (663)
++++++.. ...+..+-+.+ .++++. +.+.+.. +..++.|....+.
T Consensus 69 i~tp~~~h-~~~~~~al~~G--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (323)
T 1xea_A 69 IHAATDVH-STLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVG 120 (323)
T ss_dssp ECSCGGGH-HHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCchhH-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEe
Confidence 99997643 33333333333 256653 2333333 3345677766553
No 373
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=91.48 E-value=0.086 Score=55.17 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=57.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~v 481 (663)
.+++-|+|+|++|+.+++.+.. ..|.+|++.|++++..+...+.+.... .+. +.+ +++|.|
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~---------~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~ell-----~~aDvV 224 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVH---------GLGMKLVYYDVAPADAETEKALGAERV----DSLEELA-----RRSDCV 224 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------TTCCEEEEECSSCCCHHHHHHHTCEEC----SSHHHHH-----HHCSEE
T ss_pred CCEEEEEEECHHHHHHHHHHHH---------hcCCEEEEECCCCcchhhHhhcCcEEe----CCHHHHh-----ccCCEE
Confidence 4579999999999999999951 578899999999876665555454322 233 344 367888
Q ss_pred EEEcCCHHH--HHHHHHHHHHhCCCCcEEE
Q 006034 482 MIMYTDKKR--TIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 482 v~~~~dd~~--n~~~~~~~r~~~~~~~iia 509 (663)
+.+.+.+.. ++.-....+.+.|+ .++.
T Consensus 225 il~vp~~~~t~~li~~~~l~~mk~g-aili 253 (348)
T 2w2k_A 225 SVSVPYMKLTHHLIDEAFFAAMKPG-SRIV 253 (348)
T ss_dssp EECCCCSGGGTTCBCHHHHHHSCTT-EEEE
T ss_pred EEeCCCChHHHHHhhHHHHhcCCCC-CEEE
Confidence 888876533 22222344556555 3443
No 374
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=91.48 E-value=0.15 Score=50.51 Aligned_cols=71 Identities=15% Similarity=0.253 Sum_probs=48.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|++++++++..+...+ ....++.+|.+|++..+++
T Consensus 8 k~~lVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLA----------QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46788886 678999999998 789999999999987665543 2467889999998876543
Q ss_pred CCCCCcEEEEE
Q 006034 474 GITSPKAVMIM 484 (663)
Q Consensus 474 ~i~~a~~vv~~ 484 (663)
...+.|.+|-.
T Consensus 78 ~~g~id~lv~n 88 (257)
T 3tpc_A 78 EFGHVHGLVNC 88 (257)
T ss_dssp HHSCCCEEEEC
T ss_pred HcCCCCEEEEC
Confidence 12256766644
No 375
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=91.47 E-value=0.13 Score=49.66 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=55.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCC-EEEEeCChH-HHHHHHhcCCCEEEecCCC-HHHHHhcCCCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPS-VVKESRKLGFPILYGDASR-PAVLLSAGITSP 478 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~-vvvid~d~~-~~~~~~~~~~~vi~GD~~~-~~~L~~a~i~~a 478 (663)
...+++|+|.|+.|+.+++.+.. ++.+++ +-++|.||+ +.....-.|.+|+. ..| ++.+++ .+.
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~--------~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~---~~I 149 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFH--------DRNKMQISMAFDLDSNDLVGKTTEDGIPVYG--ISTINDHLID---SDI 149 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCC--------TTSSEEEEEEEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-C---CSC
T ss_pred CCCEEEEECcCHHHHHHHHhhhc--------ccCCeEEEEEEeCCchhccCceeECCeEEeC--HHHHHHHHHH---cCC
Confidence 45689999999999999997531 134555 457799998 65430114777773 333 333333 467
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHhC
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRLAF 502 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~~~ 502 (663)
|.+++++++... -.++..+.+.+
T Consensus 150 d~vIIAvPs~~a-q~v~d~lv~~G 172 (212)
T 3keo_A 150 ETAILTVPSTEA-QEVADILVKAG 172 (212)
T ss_dssp CEEEECSCGGGH-HHHHHHHHHHT
T ss_pred CEEEEecCchhH-HHHHHHHHHcC
Confidence 889999887543 34555566554
No 376
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=91.43 E-value=0.23 Score=49.87 Aligned_cols=72 Identities=11% Similarity=0.028 Sum_probs=53.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLG----------KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 46778875 789999999998 789999999999987654432 2 356788999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 93 ~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 93 VVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHTCSCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 123678776554
No 377
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.42 E-value=0.18 Score=51.88 Aligned_cols=71 Identities=23% Similarity=0.311 Sum_probs=52.6
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh--H---HHHHHHhc-CCCEEEecCCCHHHHHhcCCC-
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP--S---VVKESRKL-GFPILYGDASRPAVLLSAGIT- 476 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~--~---~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~- 476 (663)
+++|.|. |-+|+.+++.|. +.|++|++++++. . ..+.+.+. +..++.||.+|++.++++ ++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~ 71 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFAL----------SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRL-ITK 71 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHH-HHH
T ss_pred EEEEeCCCchhHHHHHHHHH----------hCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHH-Hhc
Confidence 5899984 999999999997 7899999998742 1 22333332 478899999999887664 22
Q ss_pred -CCcEEEEEcC
Q 006034 477 -SPKAVMIMYT 486 (663)
Q Consensus 477 -~a~~vv~~~~ 486 (663)
+.|.||-+..
T Consensus 72 ~~~d~vih~A~ 82 (347)
T 1orr_A 72 YMPDSCFHLAG 82 (347)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 4788876654
No 378
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=91.42 E-value=0.11 Score=53.05 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=50.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHH---HHHHHh-----cCCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSV---VKESRK-----LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~---~~~~~~-----~~~~vi~GD~~~~~~L~~a 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++ +++. .+.+.+ .+..++.||.+|++.++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 71 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLL----------ENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAA 71 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred CEEEEECChhHHHHHHHHHHH----------HCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHH
Confidence 46899985 999999999997 78999999887 6532 222221 1346788999999988765
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
++++|.||-+.
T Consensus 72 -~~~~d~vih~A 82 (322)
T 2p4h_X 72 -IEGCVGIFHTA 82 (322)
T ss_dssp -HTTCSEEEECC
T ss_pred -HcCCCEEEEcC
Confidence 45678776543
No 379
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=91.41 E-value=0.23 Score=52.36 Aligned_cols=112 Identities=14% Similarity=0.155 Sum_probs=69.3
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
.+-+|.|||.| +|+.-++.+.+ ...+.+++ +.|+|+++.+...+ .|.++ +.|. +-| +++.|
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~--------~~~~~elvav~~~~~~~a~~~a~~~gv~~-~~~~---~~l----~~~~D 68 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQ--------PPEGLELVGLLAQGSARSRELAHAFGIPL-YTSP---EQI----TGMPD 68 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSS--------CCTTEEEEEEECCSSHHHHHHHHHTTCCE-ESSG---GGC----CSCCS
T ss_pred CCCEEEEEehH-HHHHHHHHHHh--------CCCCeEEEEEECCCHHHHHHHHHHhCCCE-ECCH---HHH----hcCCC
Confidence 45689999999 89988888862 12356666 66999999888765 67774 4443 333 24689
Q ss_pred EEEEEcCCHHH---HHHHHHHHHHhCCCCcEEEEec-Chh----hHHHHHHcCCCeEEcCc
Q 006034 480 AVMIMYTDKKR---TIEAVQRLRLAFPAIPIYARAQ-DMM----HLLDLKKAGATDAILEN 532 (663)
Q Consensus 480 ~vv~~~~dd~~---n~~~~~~~r~~~~~~~iia~~~-~~~----~~~~l~~~Gad~vi~p~ 532 (663)
++++++.+... -..++..+-+.+. .|++.=. +.+ -.+..++.|+-..+...
T Consensus 69 ~v~i~~p~~~h~~~~~~~a~~al~aGk--hVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~ 127 (372)
T 4gmf_A 69 IACIVVRSTVAGGAGTQLARHFLARGV--HVIQEHPLHPDDISSLQTLAQEQGCCYWINTF 127 (372)
T ss_dssp EEEECCC--CTTSHHHHHHHHHHHTTC--EEEEESCCCHHHHHHHHHHHHHHTCCEEEECS
T ss_pred EEEEECCCcccchhHHHHHHHHHHcCC--cEEEecCCCHHHHHHHHHHHHHcCCEEEEcCc
Confidence 89889887532 1455555555542 4544211 222 23334777888777654
No 380
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.38 E-value=0.21 Score=50.53 Aligned_cols=118 Identities=11% Similarity=0.028 Sum_probs=73.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++++|+|.|..|+.++..|. +.|. ++.++++++++++.+.+. +..+ +-+-+.+ + ++|.+
T Consensus 122 ~k~vlvlGaGGaaraia~~L~----------~~G~~~v~v~nRt~~ka~~La~~-~~~~-----~~~~l~~--l-~~Div 182 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLK----------DNFAKDIYVVTRNPEKTSEIYGE-FKVI-----SYDELSN--L-KGDVI 182 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHH----------HTTCSEEEEEESCHHHHHHHCTT-SEEE-----EHHHHTT--C-CCSEE
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HcCCCEEEEEeCCHHHHHHHHHh-cCcc-----cHHHHHh--c-cCCEE
Confidence 468999999999999999998 6787 899999999999888763 2222 1233443 5 89988
Q ss_pred EEEcCCH-HHHHH-HHHHHHHhCCCCcEEEEecChhhHH---HHHHcCCCeEEcCchHHHHHHH
Q 006034 482 MIMYTDK-KRTIE-AVQRLRLAFPAIPIYARAQDMMHLL---DLKKAGATDAILENAETSLQLG 540 (663)
Q Consensus 482 v~~~~dd-~~n~~-~~~~~r~~~~~~~iia~~~~~~~~~---~l~~~Gad~vi~p~~~~~~~la 540 (663)
|-+|+-- ..+.. .-.....+.++.-++=.+.++...+ ..++.|+. +++-....-.|-+
T Consensus 183 InaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~-~~~Gl~MLv~Qa~ 245 (282)
T 3fbt_A 183 INCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLFLKYARESGVK-AVNGLYMLVSQAA 245 (282)
T ss_dssp EECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHHHHHHHHTTCE-EECSHHHHHHHHH
T ss_pred EECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHHHHHHHHCcCe-EeCcHHHHHHHHH
Confidence 8888531 00100 0011222344534455666765444 44667874 6666543333333
No 381
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.34 E-value=0.2 Score=52.20 Aligned_cols=70 Identities=16% Similarity=0.289 Sum_probs=57.7
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..++++|.|.|.+|+..++.++ ..|.+|+++|.++++.+.+++.|...+. ++++.+++ .+|.+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~----~~D~v 238 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAV----------AMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE----ELDFI 238 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHH----------HTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS----CEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc----CCCEE
Confidence 4568999999999999999887 6888999999999999999998877666 55555544 78988
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
+-+++.+
T Consensus 239 id~~g~~ 245 (348)
T 3two_A 239 ISTIPTH 245 (348)
T ss_dssp EECCCSC
T ss_pred EECCCcH
Confidence 8777765
No 382
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=91.33 E-value=0.18 Score=52.13 Aligned_cols=69 Identities=19% Similarity=0.226 Sum_probs=49.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
..+++.|+|+|++|+.+++.|. ..|.+|++.|+ +++.. ...+.+... - .+-++.+ +++|.
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~~~-~~~~~g~~~--~-~~l~ell-----~~aDv 205 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQ----------GFDMDIDYFDTHRASSS-DEASYQATF--H-DSLDSLL-----SVSQF 205 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSCCCHH-HHHHHTCEE--C-SSHHHHH-----HHCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHH----------HCCCEEEEECCCCcChh-hhhhcCcEE--c-CCHHHHH-----hhCCE
Confidence 3457999999999999999997 78999999999 88763 344445432 1 1222344 36788
Q ss_pred EEEEcCCHH
Q 006034 481 VMIMYTDKK 489 (663)
Q Consensus 481 vv~~~~dd~ 489 (663)
|+.+++.++
T Consensus 206 Vil~~p~~~ 214 (320)
T 1gdh_A 206 FSLNAPSTP 214 (320)
T ss_dssp EEECCCCCT
T ss_pred EEEeccCch
Confidence 888888653
No 383
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.33 E-value=0.22 Score=51.40 Aligned_cols=133 Identities=17% Similarity=0.226 Sum_probs=79.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHh---c-------CCCEEEecCCCHHHHHh
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRK---L-------GFPILYGDASRPAVLLS 472 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~---~-------~~~vi~GD~~~~~~L~~ 472 (663)
.+|.|+|.|.+|..++..|. ..+. +++++|.|+++.+.... + ...+. +. +|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la----------~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~-~t-~d~~---- 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV----------QKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVS-GS-NTYD---- 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEE-EE-CCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEE-EC-CCHH----
Confidence 47999999999999999997 5566 79999999987653221 1 12222 21 2222
Q ss_pred cCCCCCcEEEEEcC--------------CH--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHHc-C--CCe
Q 006034 473 AGITSPKAVMIMYT--------------DK--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKKA-G--ATD 527 (663)
Q Consensus 473 a~i~~a~~vv~~~~--------------dd--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~~~-G--ad~ 527 (663)
.+++||.||.+.+ .| ..|.. ++..+++..|+..++. +.|+.+. ..+.+. | .++
T Consensus 69 -al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNP~~~~t~~~~~~~g~~~~r 146 (322)
T 1t2d_A 69 -DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV-VTNPVDVMVQLLHQHSGVPKNK 146 (322)
T ss_dssp -GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSSHHHHHHHHHHHHCCCGGG
T ss_pred -HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-ecCChHHHHHHHHHhcCCChHH
Confidence 3679998888861 11 23332 4455566678865554 4555443 333332 2 445
Q ss_pred EEcC-chHHHHHHHHHHHHhcCCCHHHH
Q 006034 528 AILE-NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 528 vi~p-~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
++-- ......++-..+-+.+++++..+
T Consensus 147 viG~gt~ld~~R~~~~la~~lgv~~~~v 174 (322)
T 1t2d_A 147 IIGLGGVLDTSRLKYYISQKLNVCPRDV 174 (322)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTSCGGGE
T ss_pred EEeccCcccHHHHHHHHHHHhCCCHHHe
Confidence 6655 44445555555656666666433
No 384
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=91.33 E-value=0.36 Score=50.17 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=71.3
Q ss_pred cEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 405 PVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 405 ~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
++-|+|+|++|+. .+..+.+ .++.+++ +.|.|+++++.+.+ .+.+-.+.|. +++|++ ++.|+|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~---------~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~--~ell~~---~~iDaV 90 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQD---------AENCVVTAIASRDLTRAREMADRFSVPHAFGSY--EEMLAS---DVIDAV 90 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHH---------CSSEEEEEEECSSHHHHHHHHHHHTCSEEESSH--HHHHHC---SSCSEE
T ss_pred EEEEEcChHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCH--HHHhcC---CCCCEE
Confidence 7999999999985 5777762 5677776 56999999888765 5666555432 345544 467999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
+++|+++.. ...+..|-+.+ .+|++. +.+.+..+ ..++.|.-..+..
T Consensus 91 ~I~tP~~~H-~~~~~~al~aG--khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~ 144 (350)
T 4had_A 91 YIPLPTSQH-IEWSIKAADAG--KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY 144 (350)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC
T ss_pred EEeCCCchh-HHHHHHHHhcC--CEEEEeCCcccchhhHHHHHHHHHHcCCceeEee
Confidence 999998643 34444555554 256663 33433333 3455677655544
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.32 E-value=0.44 Score=49.92 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=58.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH-hcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~-~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++++|.|.|.+|+..++.++ ..|.+|++++.++++.+.+. +.|...+. |..+++.+++.. +.+|.+
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~----------~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~-~~~D~v 255 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAK----------AFGSKVTVISTSPSKKEEALKNFGADSFL-VSRDQEQMQAAA-GTLDGI 255 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCGGGHHHHHHTSCCSEEE-ETTCHHHHHHTT-TCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCceEE-eccCHHHHHHhh-CCCCEE
Confidence 458999999999999999987 78899999999999988877 66765433 667777676653 578988
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
+-+++..
T Consensus 256 id~~g~~ 262 (366)
T 1yqd_A 256 IDTVSAV 262 (366)
T ss_dssp EECCSSC
T ss_pred EECCCcH
Confidence 8887754
No 386
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=91.30 E-value=0.077 Score=55.54 Aligned_cols=54 Identities=26% Similarity=0.435 Sum_probs=42.2
Q ss_pred EEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCC
Q 006034 406 VVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 406 viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
|+|+|.|..|..+|..|. +.|++|+++|++++. +.+..+|++..+.++++.++.
T Consensus 7 ViIVGaGpaGl~~A~~La----------~~G~~V~v~Er~~~~-------~~~~~~g~~l~~~~l~~l~~~ 60 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAA----------KYGLKTLMIEKRPEI-------GSPVRCGEGLSKGILNEADIK 60 (397)
T ss_dssp EEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSST-------TCSCCSCCEEETHHHHHTTCC
T ss_pred EEEECcCHHHHHHHHHHH----------HCCCcEEEEeCCCCC-------CCCCceecccCHHHHHHcCCC
Confidence 899999999999999998 799999999987643 333344555556677777664
No 387
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=91.29 E-value=1.2 Score=42.00 Aligned_cols=97 Identities=15% Similarity=-0.002 Sum_probs=61.0
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhcC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a~ 474 (663)
..++++-+|+|. |.......+ ...+.+|+.+|.|++.++.+++ ....++.||..+. +. .
T Consensus 40 ~~~~vLDiG~G~-G~~~~~la~---------~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~--~ 105 (204)
T 3e05_A 40 DDLVMWDIGAGS-ASVSIEASN---------LMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG--LD--D 105 (204)
T ss_dssp TTCEEEEETCTT-CHHHHHHHH---------HCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT--CT--T
T ss_pred CCCEEEEECCCC-CHHHHHHHH---------HCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh--hh--c
Confidence 456899999985 554444333 1235789999999999877764 2467889998643 21 2
Q ss_pred CCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 475 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 475 i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
.++.|.+++...............+.+.|+-.++....
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 25789877654433233334455566777756655433
No 388
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=91.29 E-value=1.2 Score=39.70 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=65.3
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhC--CCCc
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAF--PAIP 506 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~--~~~~ 506 (663)
..+.+|.++|.|+...+.++ +.|+.+..- .+-.+.++...-.+.|.+++-.+- +..-...+..+|+.. ++++
T Consensus 5 ~~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 5 NRAGEILIVEDSPTQAEHLKHILEETGYQTEHV-RNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred cCCCcEEEEeCCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 45678999999988765544 356666443 233556666666788988887653 234456777778763 7788
Q ss_pred EEEEec--ChhhHHHHHHcCCCeEEcCc
Q 006034 507 IYARAQ--DMMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 507 iia~~~--~~~~~~~l~~~Gad~vi~p~ 532 (663)
+++... +.+......++|++.++.-.
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~KP 111 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLECGADDFITKP 111 (154)
T ss_dssp EEEEECCCSHHHHHHHHHHCCSEEEESS
T ss_pred EEEEECCCChHHHHHHHHCCCCEEEeCC
Confidence 877664 55666777889999877654
No 389
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.29 E-value=0.55 Score=46.54 Aligned_cols=88 Identities=19% Similarity=0.202 Sum_probs=58.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCCh-------------------HHHHHHH----hc--C
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVVKESR----KL--G 456 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~-------------------~~~~~~~----~~--~ 456 (663)
+.||+|+|.|..|..+++.|. ..|. ++.++|.|. .+++.+. +. +
T Consensus 28 ~~~VlvvG~GglG~~va~~La----------~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLA----------GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHH----------HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cCcEEEEccCHHHHHHHHHHH----------HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 468999999999999999997 5666 788998874 3444333 21 2
Q ss_pred CCE--EEecCCCHHHHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhC
Q 006034 457 FPI--LYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAF 502 (663)
Q Consensus 457 ~~v--i~GD~~~~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~ 502 (663)
..+ +..+.+ ++.+.+. ++++|.||.++++.+....+...+++.+
T Consensus 98 ~~v~~~~~~~~-~~~~~~~-~~~~DvVi~~~d~~~~r~~l~~~~~~~~ 143 (251)
T 1zud_1 98 IQLTALQQRLT-GEALKDA-VARADVVLDCTDNMATRQEINAACVALN 143 (251)
T ss_dssp SEEEEECSCCC-HHHHHHH-HHHCSEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CEEEEEeccCC-HHHHHHH-HhcCCEEEECCCCHHHHHHHHHHHHHhC
Confidence 322 222233 3333221 4578988888888776667777777764
No 390
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.28 E-value=0.13 Score=53.09 Aligned_cols=67 Identities=18% Similarity=0.306 Sum_probs=47.8
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
..+++-|+|+|++|+.+|+.|. ..|.+|++.|++++..+ +.....+. +.|+++ ++++|.|
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~-----~~~~~~~~----~~l~el-l~~aDiV 197 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQ----------AWGFPLRCWSRSRKSWP-----GVESYVGR----EELRAF-LNQTRVL 197 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHH----------TTTCCEEEEESSCCCCT-----TCEEEESH----HHHHHH-HHTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEEcCCchhhh-----hhhhhccc----CCHHHH-HhhCCEE
Confidence 3468999999999999999998 78999999999887432 23223332 223322 3578888
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
++..+..
T Consensus 198 ~l~~Plt 204 (315)
T 3pp8_A 198 INLLPNT 204 (315)
T ss_dssp EECCCCC
T ss_pred EEecCCc
Confidence 8887754
No 391
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=91.25 E-value=0.31 Score=50.46 Aligned_cols=83 Identities=16% Similarity=0.272 Sum_probs=54.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.|. ..|.+|++.|++++..+...+.+... .+-++.+ +++|.|+
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~----~~l~ell-----~~aDvV~ 205 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQ----------GWGATLQYHEAKALDTQTEQRLGLRQ----VACSELF-----ASSDFIL 205 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTT----------TSCCEEEEECSSCCCHHHHHHHTEEE----CCHHHHH-----HHCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCCCCcHhHHHhcCcee----CCHHHHH-----hhCCEEE
Confidence 457999999999999999997 78999999999875544444444321 1223344 3578888
Q ss_pred EEcCCHHH--HHHHHHHHHHhCCC
Q 006034 483 IMYTDKKR--TIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~--n~~~~~~~r~~~~~ 504 (663)
++.+.++. ++.-....+.+.|+
T Consensus 206 l~~P~t~~t~~li~~~~l~~mk~g 229 (330)
T 4e5n_A 206 LALPLNADTLHLVNAELLALVRPG 229 (330)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTT
T ss_pred EcCCCCHHHHHHhCHHHHhhCCCC
Confidence 88775432 22222344444444
No 392
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=91.24 E-value=0.23 Score=48.60 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=63.1
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCE-EEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~v-vvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
+|.|+|+|++|+.+++.|. +.++++ .+.|++++ .+ . ..+|.+-+-+ .++|.|+.
T Consensus 2 ~vgiIG~G~mG~~~~~~l~----------~~g~~lv~v~d~~~~-~~----~-------~~~~~~~l~~---~~~DvVv~ 56 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE----------RNGFEIAAILDVRGE-HE----K-------MVRGIDEFLQ---REMDVAVE 56 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEEECSSCC-CT----T-------EESSHHHHTT---SCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHh----------cCCCEEEEEEecCcc-hh----h-------hcCCHHHHhc---CCCCEEEE
Confidence 5889999999999999997 678887 57888752 21 1 2334443322 68999999
Q ss_pred EcCCHHHHHHHHHHHHHhCCCCcEEEEec----Ch----hhHHHHHHcCCCeEEcCchH
Q 006034 484 MYTDKKRTIEAVQRLRLAFPAIPIYARAQ----DM----MHLLDLKKAGATDAILENAE 534 (663)
Q Consensus 484 ~~~dd~~n~~~~~~~r~~~~~~~iia~~~----~~----~~~~~l~~~Gad~vi~p~~~ 534 (663)
+++++ .....+..+-+.+ ..++.... ++ +-.+..++.|....+.+...
T Consensus 57 ~~~~~-~~~~~~~~~l~~G--~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~ 112 (236)
T 2dc1_A 57 AASQQ-AVKDYAEKILKAG--IDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAI 112 (236)
T ss_dssp CSCHH-HHHHHHHHHHHTT--CEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTC
T ss_pred CCCHH-HHHHHHHHHHHCC--CcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccc
Confidence 99876 3344444444433 35555322 11 22233456677766676643
No 393
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.24 E-value=0.43 Score=49.68 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=54.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.|. ..|.+|.+.|+++...+... +... ..+.+-+ ++++|.|+
T Consensus 173 gktvGIIGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~~~~--g~~~----~~~l~el----l~~sDvV~ 232 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRAR----------GFGLAIHYHNRTRLSHALEE--GAIY----HDTLDSL----LGASDIFL 232 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHH----------TTTCEEEEECSSCCCHHHHT--TCEE----CSSHHHH----HHTCSEEE
T ss_pred CCEEEEEEeChhHHHHHHHHH----------HCCCEEEEECCCCcchhhhc--CCeE----eCCHHHH----HhhCCEEE
Confidence 457999999999999999998 78999999999875443222 3222 1233322 34789898
Q ss_pred EEcCCHHHH--HHHHHHHHHhCCC
Q 006034 483 IMYTDKKRT--IEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~n--~~~~~~~r~~~~~ 504 (663)
+.++.++++ +.-....+.+.|+
T Consensus 233 l~~Plt~~T~~li~~~~l~~mk~g 256 (345)
T 4g2n_A 233 IAAPGRPELKGFLDHDRIAKIPEG 256 (345)
T ss_dssp ECSCCCGGGTTCBCHHHHHHSCTT
T ss_pred EecCCCHHHHHHhCHHHHhhCCCC
Confidence 888864332 2323455566555
No 394
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.23 E-value=0.63 Score=45.97 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=62.0
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+|+|+|+ |++|+.+++.+.+ .++++++ ++|.+ .|.+.+.+ .++|++|
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~---------~~~~elva~~d~~-------------------~dl~~~~~---~~~DvvI 50 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAA---------ADDLTLSAELDAG-------------------DPLSLLTD---GNTEVVI 50 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHH---------CTTCEEEEEECTT-------------------CCTHHHHH---TTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHh---------CCCCEEEEEEccC-------------------CCHHHHhc---cCCcEEE
Confidence 5899996 9999999999862 5678876 55543 12222222 3678666
Q ss_pred EEcCCHHHHHHHHHHHHHhCCCCcEEEEe--cChhhHHHHHHc-----CCCeEEcCchHHHHHHHHHH
Q 006034 483 IMYTDKKRTIEAVQRLRLAFPAIPIYARA--QDMMHLLDLKKA-----GATDAILENAETSLQLGSKL 543 (663)
Q Consensus 483 ~~~~dd~~n~~~~~~~r~~~~~~~iia~~--~~~~~~~~l~~~-----Gad~vi~p~~~~~~~la~~~ 543 (663)
=.|+.+ .....+..+.+.+. +++.-. -+++..+.++++ ++-.++.|+.-.|-.+-.++
T Consensus 51 DfT~p~-a~~~~~~~a~~~g~--~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l 115 (245)
T 1p9l_A 51 DFTHPD-VVMGNLEFLIDNGI--HAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHF 115 (245)
T ss_dssp ECSCTT-THHHHHHHHHHTTC--EEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHH
T ss_pred EccChH-HHHHHHHHHHHcCC--CEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHH
Confidence 455443 33333445555543 444422 344555555554 67778999975555444433
No 395
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.19 E-value=0.23 Score=49.16 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=51.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--cCCCEEEecCCCHHHHHhc------C
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSA------G 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--~~~~vi~GD~~~~~~L~~a------~ 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++. +...+ .. .++.+|.+|++.++++ .
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFA----------REGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 46888876 788999999998 789999999999877 54433 13 7889999998866543 1
Q ss_pred CCCCcEEEEEc
Q 006034 475 ITSPKAVMIMY 485 (663)
Q Consensus 475 i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 75 ~g~iD~lv~~A 85 (256)
T 2d1y_A 75 LGRVDVLVNNA 85 (256)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 23567666543
No 396
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=91.18 E-value=0.26 Score=49.63 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++++++.+.+.+ .....+.+|.+|++-.+++
T Consensus 6 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFV----------AEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46777775 679999999998 789999999999998877664 2456788999998765442
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 76 ~~g~iD~lvnnA 87 (281)
T 3zv4_A 76 AFGKIDTLIPNA 87 (281)
T ss_dssp HHSCCCEEECCC
T ss_pred hcCCCCEEEECC
Confidence 123557665443
No 397
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.17 E-value=0.065 Score=57.25 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=63.0
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCC-------------CHH-
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDAS-------------RPA- 468 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~-------------~~~- 468 (663)
..+++|+|+|.+|+.+++.+. ..|.+|++.|.++++.+.+.+.|..++.-|.. +++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~----------~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAAN----------SLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAF 241 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHH
Confidence 468999999999999999997 78889999999999988887766554421211 111
Q ss_pred ------HHHhcCCCCCcEEEEEc---CCHHHHHHHHHHHHHhCCCCcEEEEe
Q 006034 469 ------VLLSAGITSPKAVMIMY---TDKKRTIEAVQRLRLAFPAIPIYARA 511 (663)
Q Consensus 469 ------~L~~a~i~~a~~vv~~~---~dd~~n~~~~~~~r~~~~~~~iia~~ 511 (663)
.+++ -+.++|.++.++ +.+...+......+.+.|...++-.+
T Consensus 242 ~~~~~~~l~e-~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 242 IKAEMELFAA-QAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHH-HHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHH-HhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 2322 224689887773 21111222234566677774555444
No 398
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.13 E-value=0.087 Score=53.25 Aligned_cols=114 Identities=11% Similarity=0.027 Sum_probs=68.0
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.++++|+|.|..|+.++..|. +.|. ++.++++++++.+.+.+. .... ..+-+.++ ++++|.|
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~----------~~G~~~v~v~~R~~~~a~~la~~-~~~~-----~~~~~~~~-~~~aDiV 179 (277)
T 3don_A 117 DAYILILGAGGASKGIANELY----------KIVRPTLTVANRTMSRFNNWSLN-INKI-----NLSHAESH-LDEFDII 179 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHH----------TTCCSCCEEECSCGGGGTTCCSC-CEEE-----CHHHHHHT-GGGCSEE
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHh-cccc-----cHhhHHHH-hcCCCEE
Confidence 457999999999999999998 7887 899999999987766542 2211 22334432 6789988
Q ss_pred EEEcCCHH-HHHHHHHHHHHhCCCCcEEEEecChhh---HHHHHHcCCCeEEcCchH
Q 006034 482 MIMYTDKK-RTIEAVQRLRLAFPAIPIYARAQDMMH---LLDLKKAGATDAILENAE 534 (663)
Q Consensus 482 v~~~~dd~-~n~~~~~~~r~~~~~~~iia~~~~~~~---~~~l~~~Gad~vi~p~~~ 534 (663)
|.+|+... .+.....-...+.++.-++=.+.++.. .+..++.|+. +++-...
T Consensus 180 InaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~-~~~Gl~M 235 (277)
T 3don_A 180 INTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNP-IYNGLDM 235 (277)
T ss_dssp EECCC-------CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCC-EECTHHH
T ss_pred EECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCE-EeCCHHH
Confidence 88876531 111000111123334223334445533 3445678884 5666543
No 399
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=91.12 E-value=0.12 Score=54.91 Aligned_cols=84 Identities=12% Similarity=0.044 Sum_probs=55.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+++.|. ..|.+|.+.|++++..+...+.|.... .+.+.+ ++++|.|+
T Consensus 191 gktvGIIGlG~IG~~vA~~l~----------a~G~~V~~~d~~~~~~~~~~~~G~~~~----~~l~el----l~~aDvV~ 252 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLA----------PFDVHLHYTDRHRLPESVEKELNLTWH----ATREDM----YPVCDVVT 252 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHG----------GGTCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----GGGCSEEE
T ss_pred CCEEEEEeECHHHHHHHHHHH----------hCCCEEEEEcCCccchhhHhhcCceec----CCHHHH----HhcCCEEE
Confidence 457999999999999999997 789999999998765555555454321 222222 24789888
Q ss_pred EEcCCHHH--HHHHHHHHHHhCCC
Q 006034 483 IMYTDKKR--TIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~--n~~~~~~~r~~~~~ 504 (663)
+..+.++. ++.-....+.+.++
T Consensus 253 l~~Plt~~t~~li~~~~l~~mk~g 276 (393)
T 2nac_A 253 LNCPLHPETEHMINDETLKLFKRG 276 (393)
T ss_dssp ECSCCCTTTTTCBSHHHHTTSCTT
T ss_pred EecCCchHHHHHhhHHHHhhCCCC
Confidence 88875432 22222344445555
No 400
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=91.09 E-value=0.17 Score=50.22 Aligned_cols=72 Identities=17% Similarity=0.062 Sum_probs=51.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCC---CCEEEEeCChHHHHHHHh-----cCCCEEEecCCCHHHHHhcC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG---WPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~---~~vvvid~d~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a~ 474 (663)
++++|.|. |-+|+.+++.|. +.| ++|++++++++..+.+.+ ....++.+|.+|++.++++-
T Consensus 22 k~vlITGasggIG~~la~~L~----------~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 91 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALL----------NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV 91 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHH----------TSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHH----------hcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHH
Confidence 45777765 889999999998 677 999999999875443332 24677899999998766531
Q ss_pred --C----C--CCcEEEEEc
Q 006034 475 --I----T--SPKAVMIMY 485 (663)
Q Consensus 475 --i----~--~a~~vv~~~ 485 (663)
+ . +.|.+|-..
T Consensus 92 ~~~~~~~g~~~id~li~~A 110 (267)
T 1sny_A 92 ADIEGVTKDQGLNVLFNNA 110 (267)
T ss_dssp HHHHHHHGGGCCSEEEECC
T ss_pred HHHHHhcCCCCccEEEECC
Confidence 0 1 567776554
No 401
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.07 E-value=0.72 Score=49.73 Aligned_cols=113 Identities=15% Similarity=0.059 Sum_probs=71.3
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh----cCC---CEEEecCCCHHHHHhcCC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK----LGF---PILYGDASRPAVLLSAGI 475 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~----~~~---~vi~GD~~~~~~L~~a~i 475 (663)
-+|.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+. .++.++.+|.+-+-+ -
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~---------~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~--~ 89 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMAR---------RDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLK--D 89 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHT---------CTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTT--C
T ss_pred ceEEEEecCHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhc--C
Confidence 379999999999999999872 4567765 66999999887654 343 333333334443322 2
Q ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEEc
Q 006034 476 TSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAIL 530 (663)
Q Consensus 476 ~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi~ 530 (663)
.+.|+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+. .++.|....+.
T Consensus 90 ~~vD~V~i~tp~~~h-~~~~~~al~aG--khV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 148 (444)
T 2ixa_A 90 KNIDAVFVSSPWEWH-HEHGVAAMKAG--KIVGMEVSGAITLEECWDYVKVSEQTGVPLMAL 148 (444)
T ss_dssp TTCCEEEECCCGGGH-HHHHHHHHHTT--CEEEECCCCCSSHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCCCEEEEcCCcHHH-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 468999999997643 44444444544 356663 344444333 35668776654
No 402
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.05 E-value=0.14 Score=51.22 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=52.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---------cCCCEEEecCCCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---------LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---------~~~~vi~GD~~~~~~L~~a 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++.++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFA----------REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 76 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH
Confidence 45777775 789999999998 789999999999987665432 1256788999999877653
Q ss_pred C------CCCCcEEEEEc
Q 006034 474 G------ITSPKAVMIMY 485 (663)
Q Consensus 474 ~------i~~a~~vv~~~ 485 (663)
= ..+.|.+|-..
T Consensus 77 ~~~~~~~~g~id~lv~~A 94 (278)
T 1spx_A 77 LSTTLGKFGKLDILVNNA 94 (278)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 1 12567666543
No 403
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.04 E-value=0.4 Score=55.14 Aligned_cols=40 Identities=23% Similarity=0.376 Sum_probs=36.0
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 452 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~ 452 (663)
-++|-|+|.|.+|..+|..|. +.|++|++.|.|++.++..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la----------~aG~~V~l~D~~~~~~~~~ 353 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA----------SKGTPILMKDINEHGIEQG 353 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHH
T ss_pred CCEEEEECCChhhHHHHHHHH----------hCCCEEEEEECCHHHHHHH
Confidence 457999999999999999997 7899999999999987763
No 404
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.04 E-value=0.29 Score=48.69 Aligned_cols=72 Identities=10% Similarity=0.047 Sum_probs=52.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-----c---CCCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----L---GFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-----~---~~~vi~GD~~~~~~L~~a- 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|+++++|+++.+...+ . ....+.+|.+|++-.+++
T Consensus 9 k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 78 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLL----------EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFA 78 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHH
Confidence 46777776 679999999998 789999999999987665432 1 256778999998876543
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 79 ~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 79 EACERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHHHCSCSEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 123567666544
No 405
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=91.03 E-value=0.16 Score=50.26 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=52.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHHHHHHHh----c--CCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESRK----L--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++ +++..+.+.+ . ...++.+|.+|++.++++
T Consensus 8 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFA----------TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 46777765 788999999998 78999999999 8776554432 2 356788999999876653
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 78 ~~~~~~g~id~li~~A 93 (261)
T 1gee_A 78 SAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 112568776553
No 406
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=91.02 E-value=0.27 Score=48.39 Aligned_cols=72 Identities=11% Similarity=0.095 Sum_probs=54.1
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. +-+|+.+++.|. ++|++|++++++++..+...+ .....+.+|.+|++-.+++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLA----------ERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHH
Confidence 45777776 678999999998 789999999999988776553 3456788999999876543
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 80 ~~g~iD~lv~nA 91 (248)
T 3op4_A 80 EFGGVDILVNNA 91 (248)
T ss_dssp HHCCCSEEEECC
T ss_pred HcCCCCEEEECC
Confidence 113567666543
No 407
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=91.01 E-value=0.83 Score=39.61 Aligned_cols=94 Identities=18% Similarity=0.139 Sum_probs=56.4
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhCC-CCcEE
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFP-AIPIY 508 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~-~~~ii 508 (663)
..+.++.++|.|+...+.+. +.|+.+...+ +-.+.++...-...|.++ .++ ......+..+|+. + +++++
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~al~~l~~~~~dlvi--~~~-~~g~~~~~~l~~~-~~~~~ii 90 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGFMADVTE-SLEDGEYLMDIRNYDLVM--VSD-KNALSFVSRIKEK-HSSIVVL 90 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHSCCSEEE--ECS-TTHHHHHHHHHHH-STTSEEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCcEEEEeC-CHHHHHHHHHcCCCCEEE--EcC-ccHHHHHHHHHhc-CCCccEE
Confidence 34556777777776544333 3455554321 223344433334678776 333 3345677778887 7 88888
Q ss_pred EEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 509 ARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 509 a~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
...... +......+.|++.++.-.
T Consensus 91 ~ls~~~~~~~~~~~~~~g~~~~l~kP 116 (137)
T 2pln_A 91 VSSDNPTSEEEVHAFEQGADDYIAKP 116 (137)
T ss_dssp EEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEeCCCCHHHHHHHHHcCCceeeeCC
Confidence 776544 666777889999876554
No 408
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=90.97 E-value=0.099 Score=56.55 Aligned_cols=71 Identities=17% Similarity=0.222 Sum_probs=48.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCC------CCCEEEEeCC-hHHHHHHHhcCCCEEEecC-CCHHHHHhcCC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV------GWPFVAFDLN-PSVVKESRKLGFPILYGDA-SRPAVLLSAGI 475 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~------~~~vvvid~d-~~~~~~~~~~~~~vi~GD~-~~~~~L~~a~i 475 (663)
++|.|+|+|.+|..+++.|. +. |.+|++-+++ ++..+.+.+.|..+..+.. +..+..
T Consensus 55 KkIgIIGlGsMG~AmA~nLr----------~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa----- 119 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLR----------DSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETV----- 119 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHH----------HHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHH-----
T ss_pred CEEEEEeEhHHHHHHHHHHH----------hcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHH-----
Confidence 48999999999999999998 55 8888766554 4455666666655310000 122333
Q ss_pred CCCcEEEEEcCCHH
Q 006034 476 TSPKAVMIMYTDKK 489 (663)
Q Consensus 476 ~~a~~vv~~~~dd~ 489 (663)
++||.|++++.+..
T Consensus 120 ~~ADVVILaVP~~~ 133 (525)
T 3fr7_A 120 SGSDLVLLLISDAA 133 (525)
T ss_dssp HHCSEEEECSCHHH
T ss_pred hcCCEEEECCChHH
Confidence 46898999998863
No 409
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.96 E-value=0.4 Score=49.83 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=50.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.+. ..|.+|.+.|++++.. .+.. . ..+.+-+ ++++|.|+
T Consensus 171 gktiGIIGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~-----~~~~--~--~~sl~el----l~~aDvVi 227 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAE----------AFGMSVRYWNRSTLSG-----VDWI--A--HQSPVDL----ARDSDVLA 227 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSCCTT-----SCCE--E--CSSHHHH----HHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCcccc-----cCce--e--cCCHHHH----HhcCCEEE
Confidence 457999999999999999997 7899999999988651 1221 1 2233222 34789898
Q ss_pred EEcCCHHHHH--HHHHHHHHhCCCC
Q 006034 483 IMYTDKKRTI--EAVQRLRLAFPAI 505 (663)
Q Consensus 483 ~~~~dd~~n~--~~~~~~r~~~~~~ 505 (663)
++.+..+.+. .-....+.+.|+.
T Consensus 228 l~vP~t~~t~~li~~~~l~~mk~ga 252 (340)
T 4dgs_A 228 VCVAASAATQNIVDASLLQALGPEG 252 (340)
T ss_dssp ECC----------CHHHHHHTTTTC
T ss_pred EeCCCCHHHHHHhhHHHHhcCCCCC
Confidence 8888654333 3235555666663
No 410
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=90.96 E-value=0.23 Score=48.41 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=53.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEE-eCChHHHHHHHh----c--CCCE-EEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAF-DLNPSVVKESRK----L--GFPI-LYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvi-d~d~~~~~~~~~----~--~~~v-i~GD~~~~~~L~~a- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++ ++++++.+.+.+ . .... +.+|.+|++.++++
T Consensus 2 k~vlITGasggiG~~~a~~l~----------~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 71 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLA----------EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALV 71 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Confidence 35778875 789999999998 789999998 888887655432 2 2445 88999999987765
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 72 ~~~~~~~~~~d~li~~A 88 (245)
T 2ph3_A 72 HQAAEVLGGLDTLVNNA 88 (245)
T ss_dssp HHHHHHHTCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 123678776654
No 411
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.94 E-value=0.31 Score=52.67 Aligned_cols=44 Identities=23% Similarity=0.351 Sum_probs=39.9
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL 455 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~ 455 (663)
..-++.++|.|.+|..+|..|. +.|++|+++|.|+++++.+.+.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La----------~~G~~V~~~D~~~~kv~~l~~g 50 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFS----------DFGHEVVCVDKDARKIELLHQN 50 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCSTTHHHHTTT
T ss_pred CceEEEEEcCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHhcC
Confidence 4557999999999999999998 7899999999999999998863
No 412
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=90.94 E-value=0.11 Score=54.08 Aligned_cols=65 Identities=18% Similarity=0.276 Sum_probs=48.6
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAV 481 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~v 481 (663)
.+++.|+|+|++|+.+++.+. ..|.+|.+.|++++. +...+.+... .+. +.+ +++|.+
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~e~l-----~~aDiV 204 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLI----------PFGVKLYYWSRHRKV-NVEKELKARY-----MDIDELL-----EKSDIV 204 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHG----------GGTCEEEEECSSCCH-HHHHHHTEEE-----CCHHHHH-----HHCSEE
T ss_pred cCEEEEEccCHHHHHHHHHHH----------HCCCEEEEECCCcch-hhhhhcCcee-----cCHHHHH-----hhCCEE
Confidence 457999999999999999997 789999999999876 4444444321 233 333 368888
Q ss_pred EEEcCCH
Q 006034 482 MIMYTDK 488 (663)
Q Consensus 482 v~~~~dd 488 (663)
+.+++.+
T Consensus 205 il~vp~~ 211 (333)
T 2d0i_A 205 ILALPLT 211 (333)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 8888875
No 413
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=90.93 E-value=0.35 Score=50.18 Aligned_cols=107 Identities=16% Similarity=0.219 Sum_probs=68.3
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCC-CEEEecCCCHHHHHhcCCCCCcEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGF-PILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~-~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
+|.|+|+|.+|+..++.|.+ +..+.+++ +.|.|+++.+.+.+ .+. ...+.| -++.+++ .+.|+|
T Consensus 4 rigiIG~G~~g~~~~~~l~~--------~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~--~~~ll~~---~~~D~V 70 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITN--------KLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPN--DDSLLAD---ENVDAV 70 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------TCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESS--HHHHHHC---TTCCEE
T ss_pred EEEEECccHHHHHHHHHHHh--------hCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCEE
Confidence 69999999999999999861 13567766 67999999888765 452 223322 2344443 468999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHcCCCe
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATD 527 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~Gad~ 527 (663)
+++++++.. ...+..+-+.+ .++++. +.+.+..+.+ ++.|...
T Consensus 71 ~i~tp~~~h-~~~~~~al~~G--k~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 71 LVTSWGPAH-ESSVLKAIKAQ--KYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred EECCCchhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 999987643 44444555554 356662 3344444433 5556654
No 414
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.92 E-value=0.067 Score=55.63 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=54.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.|. ..|.+|++.|++++.... +.+... -| -++.+ +++|.|+
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~----------~~G~~V~~~d~~~~~~~~--~~g~~~--~~--l~ell-----~~aDvV~ 199 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGL----------AFGMKVLCYDVVKREDLK--EKGCVY--TS--LDELL-----KESDVIS 199 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCHHHH--HTTCEE--CC--HHHHH-----HHCSEEE
T ss_pred CceEEEECcCHHHHHHHHHHH----------HCcCEEEEECCCcchhhH--hcCcee--cC--HHHHH-----hhCCEEE
Confidence 357999999999999999997 789999999998876532 334332 11 12233 4678888
Q ss_pred EEcCCHH--HHHHHHHHHHHhCCC
Q 006034 483 IMYTDKK--RTIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~--~n~~~~~~~r~~~~~ 504 (663)
+..+.++ .++.-....+.+.|+
T Consensus 200 l~~P~t~~t~~li~~~~l~~mk~g 223 (334)
T 2pi1_A 200 LHVPYTKETHHMINEERISLMKDG 223 (334)
T ss_dssp ECCCCCTTTTTCBCHHHHHHSCTT
T ss_pred EeCCCChHHHHhhCHHHHhhCCCC
Confidence 8877532 333334556666666
No 415
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.91 E-value=0.19 Score=49.95 Aligned_cols=72 Identities=19% Similarity=0.114 Sum_probs=51.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHHHHHHH----hc--CCCEEEecCCCHHHHHhcC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESR----KL--GFPILYGDASRPAVLLSAG- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~~~~~~----~~--~~~vi~GD~~~~~~L~~a~- 474 (663)
++++|.|. |.+|+.+++.|. ++|++|+++++ +++..+... +. ...++.+|.+|++.++++=
T Consensus 22 k~vlItGasggiG~~la~~l~----------~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELG----------RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 46777775 789999999998 78999999999 777655433 22 3457889999998776531
Q ss_pred -----CCCCcEEEEEc
Q 006034 475 -----ITSPKAVMIMY 485 (663)
Q Consensus 475 -----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 92 ~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHSCEEEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12567666543
No 416
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=90.85 E-value=0.32 Score=48.53 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=54.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh---cCCCEEEecCCCHHHHHhc------
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~---~~~~vi~GD~~~~~~L~~a------ 473 (663)
++++|.|. |-+|+.+++.|. ++|++|++.++++++.+.+.+ ....++.+|.+|++-.+++
T Consensus 28 k~vlVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFH----------AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 45666665 679999999998 789999999999998777654 2466788999999876653
Q ss_pred CCCCCcEEEEEc
Q 006034 474 GITSPKAVMIMY 485 (663)
Q Consensus 474 ~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 98 ~~g~iD~lvnnA 109 (266)
T 3grp_A 98 EMEGIDILVNNA 109 (266)
T ss_dssp HHTSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 113567666544
No 417
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=90.83 E-value=0.25 Score=48.91 Aligned_cols=72 Identities=14% Similarity=0.074 Sum_probs=53.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++.++++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLC----------KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ 75 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence 45677765 779999999998 789999999999987655432 1 356788999999866543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 76 ~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 76 VDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHTTCCCEEEECC
T ss_pred HHHhcCCCceEEEECC
Confidence 145678777655
No 418
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.80 E-value=0.19 Score=49.23 Aligned_cols=34 Identities=21% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP 446 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~ 446 (663)
+.+|.|+|.|++|..+++.|. +.|++|+.+|..+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~----------~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLD----------SVGHYVTVLHAPE 39 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHH----------HTTCEEEECSSGG
T ss_pred CcEEEEEeeCHHHHHHHHHHH----------HCCCEEEEecCHH
Confidence 457999999999999999998 7899999999853
No 419
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.79 E-value=0.28 Score=49.83 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=52.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++.+|.+|++..+++
T Consensus 42 k~vlVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~ 111 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFA----------RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR 111 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence 35666665 679999999998 789999999999987665543 2356789999999866543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 112 ~~~~~~g~iD~lvnnA 127 (293)
T 3rih_A 112 TVVDAFGALDVVCANA 127 (293)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123567666543
No 420
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.79 E-value=0.25 Score=48.92 Aligned_cols=72 Identities=11% Similarity=0.071 Sum_probs=52.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ . ....+.+|.+|++-.+++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFA----------KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHH----------HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45677775 679999999998 789999999999988665543 2 356688999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 83 ~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 83 ALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 112567666543
No 421
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.78 E-value=0.058 Score=56.09 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=53.1
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++.|+|+|++|+.+++.|. ..|.+|.+.|++++..+ +... ..+.+.+ ++++|.|+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~----------~~G~~V~~~dr~~~~~~-----g~~~----~~~l~el----l~~aDvVi 220 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAE----------AFDCPISYFSRSKKPNT-----NYTY----YGSVVEL----ASNSDILV 220 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSCCTTC-----CSEE----ESCHHHH----HHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCchhcc-----Ccee----cCCHHHH----HhcCCEEE
Confidence 357999999999999999997 78999999999887532 3221 1233222 24789899
Q ss_pred EEcCCHHH--HHHHHHHHHHhCCC
Q 006034 483 IMYTDKKR--TIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~~--n~~~~~~~r~~~~~ 504 (663)
++++.+.. ++.-....+.+.|+
T Consensus 221 l~vP~~~~t~~li~~~~l~~mk~g 244 (333)
T 3ba1_A 221 VACPLTPETTHIINREVIDALGPK 244 (333)
T ss_dssp ECSCCCGGGTTCBCHHHHHHHCTT
T ss_pred EecCCChHHHHHhhHHHHhcCCCC
Confidence 98887432 22212344556665
No 422
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.77 E-value=0.25 Score=49.64 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=53.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc--
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a-- 473 (663)
.+.++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ . ...++.+|.+|++-.+++
T Consensus 24 ~k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 93 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLA----------ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVA 93 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 356788886 678999999998 789999999999988665443 2 356788999999866542
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 94 ~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 94 AAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHCSCCEEEECC
T ss_pred HHHHHcCCCcEEEECC
Confidence 123567666543
No 423
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.74 E-value=0.18 Score=50.38 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=53.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cC--CCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LG--FPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~--~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. +.|++|+++++++++.+.+.+ .+ ...+.+|.+|++-.+++
T Consensus 5 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 74 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELG----------VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46788886 679999999998 789999999999988766543 23 45678999999876553
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 75 ~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 75 AVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 123567666543
No 424
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=90.72 E-value=0.61 Score=40.79 Aligned_cols=98 Identities=12% Similarity=-0.078 Sum_probs=62.5
Q ss_pred CCCCCEEEEeCChHHHHHHHh----c-CCCEEEecCCC-HHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhCCCCc
Q 006034 434 TVGWPFVAFDLNPSVVKESRK----L-GFPILYGDASR-PAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIP 506 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~~----~-~~~vi~GD~~~-~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~~~~~ 506 (663)
....++.++|.|+...+.+.+ . ++.++. .+.+ .+.++...-...|.+++-.+-+ ......+..+|+.++..+
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~-~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 85 (143)
T 2qv0_A 7 GEKMKVIIVEDEFLAQQELSWLINTHSQMEIVG-SFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPF 85 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHSCCEEEE-EESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCE
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHhCCCceEEE-EeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCce
Confidence 345789999999987655442 3 555442 3333 3455444445688877765432 344567777888777777
Q ss_pred EEEEecChhhHHHHHHcCCCeEEcCc
Q 006034 507 IYARAQDMMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 507 iia~~~~~~~~~~l~~~Gad~vi~p~ 532 (663)
++....+.+......+.|++.++...
T Consensus 86 ii~~s~~~~~~~~~~~~g~~~~l~KP 111 (143)
T 2qv0_A 86 IVFITAWKEHAVEAFELEAFDYILKP 111 (143)
T ss_dssp EEEEESCCTTHHHHHHTTCSEEEESS
T ss_pred EEEEeCCHHHHHHHHhCCcceEEeCC
Confidence 87777777777778899999876544
No 425
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.71 E-value=0.11 Score=53.53 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=53.7
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH--HHHHh----cCCCEEEecCCCHHHHHhcCCC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV--KESRK----LGFPILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~--~~~~~----~~~~vi~GD~~~~~~L~~a~i~ 476 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++.. +.+.+ .+..++.+|.+|++.++++=-+
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 73 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLL----------EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEK 73 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHh
Confidence 46999997 999999999997 6899999999987643 22322 2467788999999877654111
Q ss_pred -CCcEEEEEcC
Q 006034 477 -SPKAVMIMYT 486 (663)
Q Consensus 477 -~a~~vv~~~~ 486 (663)
+.|.||-+..
T Consensus 74 ~~~d~vih~A~ 84 (345)
T 2z1m_A 74 VQPDEVYNLAA 84 (345)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 4687776543
No 426
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.69 E-value=0.44 Score=49.33 Aligned_cols=75 Identities=20% Similarity=0.315 Sum_probs=57.4
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHH---HHHhcCCCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPA---VLLSAGITSP 478 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~---~L~~a~i~~a 478 (663)
..++++|.|.|.+|+..++.++ ..|.+|+++|.++++.+.+++.|...+. |.++++ .+++.. ..+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~-d~~~~~~~~~~~~~~-~~~ 231 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAK----------AMGLNVVAVDIGDEKLELAKELGADLVV-NPLKEDAAKFMKEKV-GGV 231 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCSEEE-CTTTSCHHHHHHHHH-SSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHCCCCEEe-cCCCccHHHHHHHHh-CCC
Confidence 3468999999999999999987 6889999999999999988887766443 555433 233332 578
Q ss_pred cEEEEEcCCH
Q 006034 479 KAVMIMYTDK 488 (663)
Q Consensus 479 ~~vv~~~~dd 488 (663)
|.++-+++..
T Consensus 232 d~vid~~g~~ 241 (339)
T 1rjw_A 232 HAAVVTAVSK 241 (339)
T ss_dssp EEEEESSCCH
T ss_pred CEEEECCCCH
Confidence 9888877764
No 427
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=90.64 E-value=0.1 Score=53.21 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=53.4
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCC-CCCc
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGI-TSPK 479 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i-~~a~ 479 (663)
..++++|.|. |-+|+.+++.|. +.|++|++++++++. +. .+..++.+|.+|++.++++=- .+.|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d 76 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLT----------EQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDIKPD 76 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CcceEEEECCCChHHHHHHHHHH----------HCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhcCCC
Confidence 4567888876 899999999997 689999999998765 22 156788999999988766411 2478
Q ss_pred EEEEEcC
Q 006034 480 AVMIMYT 486 (663)
Q Consensus 480 ~vv~~~~ 486 (663)
.||-+..
T Consensus 77 ~vih~A~ 83 (321)
T 2pk3_A 77 YIFHLAA 83 (321)
T ss_dssp EEEECCS
T ss_pred EEEEcCc
Confidence 7776543
No 428
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=90.61 E-value=0.97 Score=47.12 Aligned_cols=109 Identities=8% Similarity=0.026 Sum_probs=66.7
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCE-EEEeCChHHHHHHHh-cCC---CEEEecCCCHHHHHhcCCCCC
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRK-LGF---PILYGDASRPAVLLSAGITSP 478 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~v-vvid~d~~~~~~~~~-~~~---~vi~GD~~~~~~L~~a~i~~a 478 (663)
-++.|+|+|++|+..++.|.+ ..+.++ .+.|.|+++.+.+.+ .+. ...+.| -++++++ .+.
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~---------~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~--~~~ll~~---~~~ 72 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHL---------APNATISGVASRSLEKAKAFATANNYPESTKIHGS--YESLLED---PEI 72 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESS--HHHHHHC---TTC
T ss_pred eEEEEECchHHHHHHHHHHhh---------CCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCC--HHHHhcC---CCC
Confidence 379999999999999999872 456665 477999999887665 343 223322 2345543 467
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEE
Q 006034 479 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAI 529 (663)
Q Consensus 479 ~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi 529 (663)
|+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+. .++.|.-..+
T Consensus 73 D~V~i~tp~~~h-~~~~~~al~aG--k~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~ 127 (362)
T 1ydw_A 73 DALYVPLPTSLH-VEWAIKAAEKG--KHILLEKPVAMNVTEFDKIVDACEANGVQIMD 127 (362)
T ss_dssp CEEEECCCGGGH-HHHHHHHHTTT--CEEEECSSCSSSHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEcCChHHH-HHHHHHHHHCC--CeEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 999999987643 33344443333 356663 234333333 3445665543
No 429
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=90.58 E-value=0.98 Score=39.20 Aligned_cols=99 Identities=9% Similarity=0.036 Sum_probs=61.9
Q ss_pred CCCCCEEEEeCChHHHHHHH----h-cCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHH--hCCCC
Q 006034 434 TVGWPFVAFDLNPSVVKESR----K-LGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRL--AFPAI 505 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~--~~~~~ 505 (663)
....++.++|.|+...+.++ + .++.++.--.+-.+.++...-.+.|.+++-.+-. ......+..+|+ .++++
T Consensus 6 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 85 (143)
T 3cnb_A 6 KNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANI 85 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTS
T ss_pred cCCceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCC
Confidence 34577888888887654433 4 5777333222334455544445688887776532 344567778888 67888
Q ss_pred cEEEEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 506 PIYARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 506 ~iia~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
++++..... +......+.|++.++...
T Consensus 86 ~ii~~s~~~~~~~~~~~~~~g~~~~l~kP 114 (143)
T 3cnb_A 86 IVIAMTGALTDDNVSRIVALGAETCFGKP 114 (143)
T ss_dssp EEEEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred cEEEEeCCCCHHHHHHHHhcCCcEEEeCC
Confidence 888776644 444677789999876544
No 430
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=90.55 E-value=0.22 Score=48.88 Aligned_cols=72 Identities=15% Similarity=0.089 Sum_probs=52.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeC-ChHHHHHHH----hc--CCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESR----KL--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~-d~~~~~~~~----~~--~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++ ++++.+... +. ...++.+|.+|++.++++
T Consensus 5 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLA----------KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK 74 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 45777775 789999999998 78999999999 887765443 22 356788999999877653
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 75 ~~~~~~g~id~lv~nA 90 (246)
T 2uvd_A 75 QTVDVFGQVDILVNNA 90 (246)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 113567776543
No 431
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=90.55 E-value=0.2 Score=53.45 Aligned_cols=71 Identities=20% Similarity=0.258 Sum_probs=51.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH-hcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~-~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
..+++.|+|+|.+|+.+++.|. ..|. +|+++|+++++.+.+. +.|..++ +..+ +.++ +.++|
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~----------~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~---l~~~-l~~aD 229 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLV----------DRGVRAVLVANRTYERAVELARDLGGEAV--RFDE---LVDH-LARSD 229 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHH----------HHCCSEEEEECSSHHHHHHHHHHHTCEEC--CGGG---HHHH-HHTCS
T ss_pred cCCEEEEEChHHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHHcCCcee--cHHh---HHHH-hcCCC
Confidence 3568999999999999999997 6787 8999999999885544 4454432 2222 2221 25799
Q ss_pred EEEEEcCCH
Q 006034 480 AVMIMYTDK 488 (663)
Q Consensus 480 ~vv~~~~dd 488 (663)
.|+.+|+..
T Consensus 230 vVi~at~~~ 238 (404)
T 1gpj_A 230 VVVSATAAP 238 (404)
T ss_dssp EEEECCSSS
T ss_pred EEEEccCCC
Confidence 999988764
No 432
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.53 E-value=0.39 Score=47.99 Aligned_cols=72 Identities=8% Similarity=0.001 Sum_probs=52.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. +-+|+.+++.|. ++|++|++++++++..+...+ .....+.+|.+|++..+++
T Consensus 29 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELA----------RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES 98 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence 34566665 679999999998 789999999999987665432 2467789999999876543
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 99 ~~~~~g~iD~lvnnA 113 (270)
T 3ftp_A 99 TLKEFGALNVLVNNA 113 (270)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 123567776554
No 433
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=90.49 E-value=0.16 Score=51.19 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=42.4
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
+|.|+|.|++|..+++.|. +. ++|+ +.|+++++.+.+.+ .+. .. +|. ++ -++++|.|+
T Consensus 4 ~I~iIG~G~mG~~la~~l~----------~~-~~v~~v~~~~~~~~~~~~~~~g~--~~---~~~---~~-~~~~~DvVi 63 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLK----------DR-YEIGYILSRSIDRARNLAEVYGG--KA---ATL---EK-HPELNGVVF 63 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC---------------CCCEECSSHHHHHHHHHHTCC--CC---CSS---CC-CCC---CEE
T ss_pred eEEEEeCCHHHHHHHHHHH----------Hc-CcEEEEEeCCHHHHHHHHHHcCC--cc---CCH---HH-HHhcCCEEE
Confidence 5899999999999999997 45 7884 89999999888765 333 11 121 11 245678888
Q ss_pred EEcCCHH
Q 006034 483 IMYTDKK 489 (663)
Q Consensus 483 ~~~~dd~ 489 (663)
+++.++.
T Consensus 64 lav~~~~ 70 (276)
T 2i76_A 64 VIVPDRY 70 (276)
T ss_dssp ECSCTTT
T ss_pred EeCChHH
Confidence 8887764
No 434
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.43 E-value=0.13 Score=53.40 Aligned_cols=73 Identities=25% Similarity=0.282 Sum_probs=55.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH-----hcCCCEEEecCCCHHHHHhcCCC-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-----KLGFPILYGDASRPAVLLSAGIT- 476 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~-----~~~~~vi~GD~~~~~~L~~a~i~- 476 (663)
++|+|.|. |-+|+.+++.|. +.|++|++++++++..+... ..+..++.||.+|++.++++=-+
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQ----------TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------hCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc
Confidence 47999985 999999999997 68999999999876543222 23678899999999887664111
Q ss_pred CCcEEEEEcC
Q 006034 477 SPKAVMIMYT 486 (663)
Q Consensus 477 ~a~~vv~~~~ 486 (663)
+.|.||-+..
T Consensus 80 ~~d~vih~A~ 89 (357)
T 1rkx_A 80 QPEIVFHMAA 89 (357)
T ss_dssp CCSEEEECCS
T ss_pred CCCEEEECCC
Confidence 4788877654
No 435
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=90.42 E-value=0.32 Score=47.90 Aligned_cols=72 Identities=21% Similarity=0.230 Sum_probs=53.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCCh-HHHHH-HHhcC--CCEEEecCCCHHHHHhc-----
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP-SVVKE-SRKLG--FPILYGDASRPAVLLSA----- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~-~~~~~-~~~~~--~~vi~GD~~~~~~L~~a----- 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++ ++.+. +.+.+ ..++.+|.+|++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFA----------VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 46788875 789999999998 7899999999998 66543 33333 55688999999877654
Q ss_pred -CCCCCcEEEEEc
Q 006034 474 -GITSPKAVMIMY 485 (663)
Q Consensus 474 -~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 78 ~~~g~id~lv~nA 90 (249)
T 2ew8_A 78 STFGRCDILVNNA 90 (249)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 123667776543
No 436
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.36 E-value=1.9 Score=43.99 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=79.8
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHH----h----c--CCCEEEecCCCHHHHHhc
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR----K----L--GFPILYGDASRPAVLLSA 473 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~----~----~--~~~vi~GD~~~~~~L~~a 473 (663)
+|.|+|.|.+|..++..|. ..+. +++++|.|+++.+... + . ...+.. . +|.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~----------~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t-~d~~----- 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLM----------MRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG-S-NSYE----- 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-E-SCGG-----
T ss_pred CEEEECcCHHHHHHHHHHH----------hCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE-C-CCHH-----
Confidence 4889999999999999886 3344 6999999998764321 1 1 223332 1 2222
Q ss_pred CCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-cCCC--eEEcC-c
Q 006034 474 GITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGAT--DAILE-N 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l~~-~Gad--~vi~p-~ 532 (663)
.+++||.||++.+- | ..|.. ++..+++.+|+..++. +.||-+. ..+++ .|.+ +|+-- .
T Consensus 64 a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~~~~p~~rviG~gt 142 (308)
T 2d4a_B 64 DMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVI-TTNPVDAMTYVMYKKTGFPRERVIGFSG 142 (308)
T ss_dssp GGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEECCH
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-eCCchHHHHHHHHHhcCCChhhEEEecc
Confidence 36899988877432 2 34544 3445566688877666 4555432 23333 3443 66666 4
Q ss_pred hHHHHHHHHHHHHhcCCCHHHH
Q 006034 533 AETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 533 ~~~~~~la~~~~~~~~~~~~~~ 554 (663)
..-..++-+.+-+.+++++..+
T Consensus 143 ~LD~~R~~~~la~~lgv~~~~v 164 (308)
T 2d4a_B 143 ILDSARMAYYISQKLGVSFKSV 164 (308)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGE
T ss_pred cchHHHHHHHHHHHhCcChhHe
Confidence 4445566666666667766443
No 437
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.34 E-value=0.12 Score=55.68 Aligned_cols=71 Identities=25% Similarity=0.372 Sum_probs=53.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhc----------
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA---------- 473 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a---------- 473 (663)
.+|.|+|.|-+|..+|-.|. +.|++|+.+|.|+++++.+.+-..++. ++.-++.++++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A----------~~G~~V~g~Did~~kV~~ln~G~~pi~--Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFA----------LLGHRVVGYDVNPSIVERLRAGRPHIY--EPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSCHHHHHHHHTTCCSSC--CTTHHHHHHHHHHTTCEEECS
T ss_pred CEEEEEccCHHHHHHHHHHH----------hCCCcEEEEECCHHHHHHHHCCCCCCC--CCCHHHHHHHHHHcCCeeEEc
Confidence 47999999999999999997 789999999999999999987433332 34434444331
Q ss_pred ----CCCCCcEEEEEcC
Q 006034 474 ----GITSPKAVMIMYT 486 (663)
Q Consensus 474 ----~i~~a~~vv~~~~ 486 (663)
.+.++|.++++.+
T Consensus 90 ~~~~ai~~ad~~~I~Vp 106 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVG 106 (444)
T ss_dssp SHHHHHHTSSEEEECCC
T ss_pred CHHHHHhcCCceEEEec
Confidence 1456788887754
No 438
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=90.33 E-value=0.23 Score=52.36 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=52.5
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHH-----------------HH------HhcCCC
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK-----------------ES------RKLGFP 458 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~-----------------~~------~~~~~~ 458 (663)
..+|+|.|. |-+|+.+++.|. +.|++|+++|++..... .+ ...+..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~ 80 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLS----------KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE 80 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE
T ss_pred CCeEEEeCCCcHHHHHHHHHHH----------hCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceE
Confidence 456888875 999999999997 68999999998754311 11 124678
Q ss_pred EEEecCCCHHHHHhcCCC--CCcEEEEEc
Q 006034 459 ILYGDASRPAVLLSAGIT--SPKAVMIMY 485 (663)
Q Consensus 459 vi~GD~~~~~~L~~a~i~--~a~~vv~~~ 485 (663)
++.||.+|++.++++ ++ ++|+||-+.
T Consensus 81 ~~~~Dl~d~~~~~~~-~~~~~~D~Vih~A 108 (404)
T 1i24_A 81 LYVGDICDFEFLAES-FKSFEPDSVVHFG 108 (404)
T ss_dssp EEESCTTSHHHHHHH-HHHHCCSEEEECC
T ss_pred EEECCCCCHHHHHHH-HhccCCCEEEECC
Confidence 899999999877654 22 478777654
No 439
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.31 E-value=0.28 Score=51.28 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=57.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCH-HHHHhcCCCCCcE
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKA 480 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~-~~L~~a~i~~a~~ 480 (663)
..++++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |..++ +..++.. +.+|.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~~-~~~D~ 246 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISK----------AMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYF-DTFDL 246 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSC-SCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCCEEE-cCcCchHHHHHhh-cCCCE
Confidence 3468999999999999999886 6788999999999999988887766543 44444 4444443 57898
Q ss_pred EEEEcCC
Q 006034 481 VMIMYTD 487 (663)
Q Consensus 481 vv~~~~d 487 (663)
++-+++.
T Consensus 247 vid~~g~ 253 (360)
T 1piw_A 247 IVVCASS 253 (360)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 8888775
No 440
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=90.30 E-value=0.31 Score=51.13 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=54.3
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.++ ..|.+|++.|++++. +...+.+... .+.+-+ ++++|.|+
T Consensus 176 gktvGIIGlG~IG~~vA~~l~----------~fG~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV~ 235 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLS----------GFRARIRVFDPWLPR-SMLEENGVEP-----ASLEDV----LTKSDFIF 235 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHT----------TSCCEEEEECSSSCH-HHHHHTTCEE-----CCHHHH----HHSCSEEE
T ss_pred CCEEEEecCCcccHHHHHhhh----------hCCCEEEEECCCCCH-HHHhhcCeee-----CCHHHH----HhcCCEEE
Confidence 457999999999999999997 789999999988633 3344455431 223322 34788888
Q ss_pred EEcCCHH--HHHHHHHHHHHhCCC
Q 006034 483 IMYTDKK--RTIEAVQRLRLAFPA 504 (663)
Q Consensus 483 ~~~~dd~--~n~~~~~~~r~~~~~ 504 (663)
+..+..+ .++.-....+.+.|+
T Consensus 236 l~~Plt~~T~~li~~~~l~~mk~g 259 (365)
T 4hy3_A 236 VVAAVTSENKRFLGAEAFSSMRRG 259 (365)
T ss_dssp ECSCSSCC---CCCHHHHHTSCTT
T ss_pred EcCcCCHHHHhhcCHHHHhcCCCC
Confidence 8776542 333334455556665
No 441
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=90.30 E-value=1 Score=40.00 Aligned_cols=98 Identities=20% Similarity=0.151 Sum_probs=63.5
Q ss_pred CCCCEEEEeCChHHHHHHHh-----cCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEE
Q 006034 435 VGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 508 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~ii 508 (663)
...++.++|.|+...+.+.+ .++.++.--.+-.+.++...-.+.|.+++-.+- +..-...+..+|+.+|+++++
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 83 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARIL 83 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEE
T ss_pred cccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEE
Confidence 34678888888877655443 355554222233455555555668877776543 234466788889988888888
Q ss_pred EEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 509 ARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 509 a~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
+...+ .+......+.|++.++...
T Consensus 84 ~ls~~~~~~~~~~~~~~g~~~~l~kp 109 (153)
T 3cz5_A 84 IFTMHQGSAFALKAFEAGASGYVTKS 109 (153)
T ss_dssp EEESCCSHHHHHHHHHTTCSEEEETT
T ss_pred EEECCCCHHHHHHHHHCCCcEEEecC
Confidence 77654 4566677889999876543
No 442
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=90.29 E-value=0.66 Score=49.89 Aligned_cols=112 Identities=17% Similarity=0.064 Sum_probs=68.9
Q ss_pred CcEEEEcCCcchH-HHHHHhcccccCCCCCCCCCCCE-EEEeCChHHHHHHHh-cCCCE--EEecCCC-HHHHHhcCCCC
Q 006034 404 EPVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRK-LGFPI--LYGDASR-PAVLLSAGITS 477 (663)
Q Consensus 404 ~~viI~G~g~~g~-~la~~L~~~~~~~~~~~~~~~~v-vvid~d~~~~~~~~~-~~~~v--i~GD~~~-~~~L~~a~i~~ 477 (663)
-+|.|+|+|++|+ ..++.|.+ ..+.++ -+.|.|+++.+.+.+ .+... +.. .+| ++++++ .+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~-~~~~~~ll~~---~~ 150 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAG---------CQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYD-YSNFDKIAKD---PK 150 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTT---------CSSEEEEEEECSCHHHHHHHHHHTTCCGGGEEC-SSSGGGGGGC---TT
T ss_pred eEEEEECCcHHHHHHHHHHHhh---------CCCcEEEEEEcCCHHHHHHHHHHhCCCcccccc-cCCHHHHhcC---CC
Confidence 4799999999997 89998862 346665 477999999887765 34431 111 123 334432 46
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 478 PKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 478 a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
.|+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+ ..++.|+-..+..
T Consensus 151 vD~V~iatp~~~h-~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 208 (433)
T 1h6d_A 151 IDAVYIILPNSLH-AEFAIRAFKAG--KHVMCEKPMATSVADCQRMIDAAKAANKKLMIGY 208 (433)
T ss_dssp CCEEEECSCGGGH-HHHHHHHHHTT--CEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCEEEEcCCchhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 8999999988643 34444444444 256663 33444433 3355677665543
No 443
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=90.25 E-value=1.1 Score=38.58 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCC-CcEEEEEcCC-HHHHHHHHHHHHHh-CCCCcE
Q 006034 435 VGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITS-PKAVMIMYTD-KKRTIEAVQRLRLA-FPAIPI 507 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~-a~~vv~~~~d-d~~n~~~~~~~r~~-~~~~~i 507 (663)
...++.++|.|+...+.++ +.|+.+..-+ +..+.++...-.. .|.+++-.+- +......+..+|+. ++++++
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~i 84 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREALILYLKSRGIDAVGAD-GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSI 84 (136)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCCEEEES-SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCceEEEeC-CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCE
Confidence 4567888888887654443 3577766532 3333443332233 7877665542 23456677888887 688888
Q ss_pred EEEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 508 YARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 508 ia~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
+....+ .+......+.|++.++.-.
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP 111 (136)
T 3hdv_A 85 IVVSGDTDVEEAVDVMHLGVVDFLLKP 111 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEEeCCCChHHHHHHHhCCcceEEeCC
Confidence 777654 4456677889999876654
No 444
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=90.25 E-value=0.15 Score=53.29 Aligned_cols=84 Identities=21% Similarity=0.371 Sum_probs=55.4
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEE
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 482 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv 482 (663)
.+++-|+|+|++|+.+|+.|. ..|.+|++.|++++. +...+.|.... .+-++.+ +++|.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~~---~~l~ell-----~~aDiV~ 220 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGR----------AFGMNVLVWGRENSK-ERARADGFAVA---ESKDALF-----EQSDVLS 220 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSHHHH-HHHHHTTCEEC---SSHHHHH-----HHCSEEE
T ss_pred CCEEEEEeECHHHHHHHHHHH----------hCCCEEEEECCCCCH-HHHHhcCceEe---CCHHHHH-----hhCCEEE
Confidence 457999999999999999997 789999999988643 44455555321 1223344 3578888
Q ss_pred EEcCCHH--HHHHHHHHHHHhCCCC
Q 006034 483 IMYTDKK--RTIEAVQRLRLAFPAI 505 (663)
Q Consensus 483 ~~~~dd~--~n~~~~~~~r~~~~~~ 505 (663)
+..+..+ .++.-....+.+.|+.
T Consensus 221 l~~Plt~~t~~li~~~~l~~mk~ga 245 (352)
T 3gg9_A 221 VHLRLNDETRSIITVADLTRMKPTA 245 (352)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTC
T ss_pred EeccCcHHHHHhhCHHHHhhCCCCc
Confidence 8876543 2333334455555553
No 445
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=90.20 E-value=0.38 Score=47.56 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=45.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCC---CCCCEEEEeCChHHHHHHHh--------cCCCEEEecCCCHHHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNT---VGWPFVAFDLNPSVVKESRK--------LGFPILYGDASRPAVLL 471 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~---~~~~vvvid~d~~~~~~~~~--------~~~~vi~GD~~~~~~L~ 471 (663)
+.++|.|. |-+|+.+++.|. + +|++|+++++++++.+.+.+ ....++.+|.+|++.++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~----------~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 76 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLA----------RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHH----------TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH----------HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence 35666665 789999999997 5 89999999999987665442 12567889999998665
Q ss_pred h
Q 006034 472 S 472 (663)
Q Consensus 472 ~ 472 (663)
+
T Consensus 77 ~ 77 (259)
T 1oaa_A 77 R 77 (259)
T ss_dssp H
T ss_pred H
Confidence 4
No 446
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.16 E-value=0.39 Score=48.68 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=51.9
Q ss_pred CcEEEEcCC-c--chHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHH---h--cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGFG-Q--MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR---K--LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~g-~--~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~---~--~~~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|.+ . +|+.+++.|. ++|++|++++++++..+.+. + ....++.+|.+|++-.+++
T Consensus 32 k~~lVTGasg~~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAR----------EAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHH----------HTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH
Confidence 467888874 4 9999999998 78999999999975433322 2 2456788999999876643
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 102 ~~~~~~g~iD~lVnnA 117 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAI 117 (293)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 123678776543
No 447
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.14 E-value=0.7 Score=48.14 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=57.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCChHHHHHHHhcCCCEEEecCC--C-HH----HHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDAS--R-PA----VLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~~~~~~~~~~~~~vi~GD~~--~-~~----~L~~a 473 (663)
..++|+|.|.|.+|+..++.++ ..|. +|+++|.++++.+.+++.|...+. |.. | ++ +.+..
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak----------~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAK----------AMGAAQVVVTDLSATRLSKAKEIGADLVL-QISKESPQEIARKVEGQL 239 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HTTCSEEEEEESCHHHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HcCCCEEEEECCCHHHHHHHHHhCCCEEE-cCcccccchHHHHHHHHh
Confidence 3468999999999999999886 6788 899999999999999888865433 333 2 32 22334
Q ss_pred CCCCCcEEEEEcCCHH
Q 006034 474 GITSPKAVMIMYTDKK 489 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~ 489 (663)
+ +.+|.++-+++...
T Consensus 240 ~-~g~D~vid~~g~~~ 254 (356)
T 1pl8_A 240 G-CKPEVTIECTGAEA 254 (356)
T ss_dssp T-SCCSEEEECSCCHH
T ss_pred C-CCCCEEEECCCChH
Confidence 5 67999988887653
No 448
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.13 E-value=0.092 Score=57.28 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=37.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKL 455 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~ 455 (663)
.+|.|+|.|.+|..++..|. +. |++|+++|.|+++++.+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La----------~~g~G~~V~~~d~~~~~~~~l~~g 49 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIA----------HMCPEIRVTVVDVNESRINAWNSP 49 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HHCTTSEEEEECSCHHHHHHHTSS
T ss_pred cEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEECCHHHHHHHhCC
Confidence 37999999999999999997 45 89999999999999987653
No 449
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.10 E-value=0.17 Score=51.94 Aligned_cols=74 Identities=23% Similarity=0.276 Sum_probs=53.5
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH-----HHHH-HhcCCCEEEecCCCHHHHHhcC
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-----VKES-RKLGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~-----~~~~-~~~~~~vi~GD~~~~~~L~~a~ 474 (663)
...+|+|.|. |-+|+.+++.|. +.|++|++++++++. .+.+ ...+..++.||.+|++.++++=
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLL----------EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAV 82 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHH
T ss_pred cCCeEEEECCCChHHHHHHHHHH----------HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHH
Confidence 4567999986 999999999997 679999999988653 2222 1235778999999998876541
Q ss_pred CC-CCcEEEEEc
Q 006034 475 IT-SPKAVMIMY 485 (663)
Q Consensus 475 i~-~a~~vv~~~ 485 (663)
-+ +.|.||-+.
T Consensus 83 ~~~~~d~Vih~A 94 (335)
T 1rpn_A 83 IKAQPQEVYNLA 94 (335)
T ss_dssp HHHCCSEEEECC
T ss_pred HHcCCCEEEECc
Confidence 11 468777654
No 450
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=90.09 E-value=0.21 Score=48.78 Aligned_cols=72 Identities=11% Similarity=0.010 Sum_probs=53.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCC-------CEEEEeCChHHHHHHHh------cCCCEEEecCCCHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGW-------PFVAFDLNPSVVKESRK------LGFPILYGDASRPAV 469 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~-------~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~ 469 (663)
+.++|.|. |-+|+.+++.|. +.|+ +|++++++++..+.+.+ ....++.+|.+|++.
T Consensus 3 k~vlITGasggiG~~la~~l~----------~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFA----------RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD 72 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHH----------HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHH
Confidence 46888875 789999999997 6787 89999999987765543 125678899999987
Q ss_pred HHhc------CCCCCcEEEEEc
Q 006034 470 LLSA------GITSPKAVMIMY 485 (663)
Q Consensus 470 L~~a------~i~~a~~vv~~~ 485 (663)
++++ ...+.|.+|-..
T Consensus 73 v~~~~~~~~~~~g~id~li~~A 94 (244)
T 2bd0_A 73 VRRLTTHIVERYGHIDCLVNNA 94 (244)
T ss_dssp HHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHhCCCCCEEEEcC
Confidence 7653 123678777654
No 451
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.08 E-value=0.21 Score=50.50 Aligned_cols=74 Identities=16% Similarity=0.055 Sum_probs=53.2
Q ss_pred CCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCH-HHHHhc
Q 006034 403 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRP-AVLLSA 473 (663)
Q Consensus 403 ~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~-~~L~~a 473 (663)
.+.++|.|. |-+|+.+++.|. ++|++|+++++|+++.+...+ ....++.+|.+|+ +..+++
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLS----------SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 346777786 679999999998 789999999999987655432 1356788999997 544332
Q ss_pred ------CCCCCcEEEEEcC
Q 006034 474 ------GITSPKAVMIMYT 486 (663)
Q Consensus 474 ------~i~~a~~vv~~~~ 486 (663)
...+.|.+|-..+
T Consensus 82 ~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHhCCCCCEEEECCc
Confidence 1236777766554
No 452
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.08 E-value=0.15 Score=51.59 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=51.2
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCC-CCEEEEeCChHH--HHHHHhcCCCEEEecCCCHHHHHhcCCC----
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSV--VKESRKLGFPILYGDASRPAVLLSAGIT---- 476 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~-~~vvvid~d~~~--~~~~~~~~~~vi~GD~~~~~~L~~a~i~---- 476 (663)
+++|.|. |.+|+.+++.|. +.| ++|++++++++. .+.+. +.. +.||.+|++.++++--+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~ 67 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALN----------DKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFG 67 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHH----------TTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred CEEEEcCccHHHHHHHHHHH----------HCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccC
Confidence 4789987 999999999998 678 999999987654 22232 233 78999999888775322
Q ss_pred CCcEEEEEc
Q 006034 477 SPKAVMIMY 485 (663)
Q Consensus 477 ~a~~vv~~~ 485 (663)
++|.||-+.
T Consensus 68 ~~d~vi~~a 76 (310)
T 1eq2_A 68 DVEAIFHEG 76 (310)
T ss_dssp SCCEEEECC
T ss_pred CCcEEEECc
Confidence 689887664
No 453
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.05 E-value=0.5 Score=50.23 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=49.5
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCC-CCCCEEEEe---CChHHHHHH-HhcCCCE-----------EEec---C-
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNT-VGWPFVAFD---LNPSVVKES-RKLGFPI-----------LYGD---A- 464 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~-~~~~vvvid---~d~~~~~~~-~~~~~~v-----------i~GD---~- 464 (663)
+|.|+|.|.+|..++..|. + .|++|.++| +++++.+.+ ++.+..+ ..+. .
T Consensus 4 kI~ViGaG~~G~~~a~~La----------~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAA----------SRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVIT 73 (404)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEE
T ss_pred eEEEECCCHHHHHHHHHHH----------hCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEe
Confidence 6899999999999999996 5 599999999 888888874 4333111 0111 1
Q ss_pred CCHHHHHhcCCCCCcEEEEEcCCHH
Q 006034 465 SRPAVLLSAGITSPKAVMIMYTDKK 489 (663)
Q Consensus 465 ~~~~~L~~a~i~~a~~vv~~~~dd~ 489 (663)
+|.+ + -++++|.|++++....
T Consensus 74 ~~~~---~-a~~~aD~Vilav~~~~ 94 (404)
T 3c7a_A 74 KDPE---I-AISGADVVILTVPAFA 94 (404)
T ss_dssp SCHH---H-HHTTCSEEEECSCGGG
T ss_pred CCHH---H-HhCCCCEEEEeCchHH
Confidence 1222 1 1357999999988764
No 454
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=90.05 E-value=0.12 Score=52.62 Aligned_cols=64 Identities=11% Similarity=0.162 Sum_probs=35.6
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCC-CCcEE
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGIT-SPKAV 481 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~-~a~~v 481 (663)
++++|.|. |-+|+.+++.|. +.|++|++++++++. .+ ++.+|.+|++.++++=-+ +.|.|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQ----------QNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------TTTCEEEEEC--------------------------CHHHHHHHCCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHH----------hCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence 47999997 999999999998 789999999987654 12 788999998876553111 46777
Q ss_pred EEEc
Q 006034 482 MIMY 485 (663)
Q Consensus 482 v~~~ 485 (663)
|-+.
T Consensus 65 ih~A 68 (315)
T 2ydy_A 65 VHCA 68 (315)
T ss_dssp EECC
T ss_pred EECC
Confidence 6554
No 455
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=90.03 E-value=0.53 Score=50.61 Aligned_cols=113 Identities=9% Similarity=-0.029 Sum_probs=70.2
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCE-EEEeCChHHHHHHHhc--C--CCE-----------------E
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRKL--G--FPI-----------------L 460 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~v-vvid~d~~~~~~~~~~--~--~~v-----------------i 460 (663)
+-+|-|+|+|++|+..++.+.+ ..+.++ -+.|.|+++++...++ | ... .
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~---------~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~ 93 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVAR---------MQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKI 93 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT---------SSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCE
T ss_pred ceEEEEECChHHHHHHHHHHhh---------CCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCc
Confidence 3479999999999999999862 456654 4559999998877542 4 111 1
Q ss_pred EecCCCHH-HHHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecCh-------hhHHHHHHcCCCeEEcC
Q 006034 461 YGDASRPA-VLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDM-------MHLLDLKKAGATDAILE 531 (663)
Q Consensus 461 ~GD~~~~~-~L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~~-------~~~~~l~~~Gad~vi~p 531 (663)
.. .+|.+ +++. .+.|+|+++|++.+.-...+..|-+.+. +|++. +.+ +-.+..++.|.-..+..
T Consensus 94 ~v-~~D~eeLL~d---~dIDaVviaTp~p~~H~e~a~~AL~AGK--HVv~~-nk~l~~~eg~eL~~~A~e~Gvvl~~~~ 165 (446)
T 3upl_A 94 AV-TDDNDLILSN---PLIDVIIDATGIPEVGAETGIAAIRNGK--HLVMM-NVEADVTIGPYLKAQADKQGVIYSLGA 165 (446)
T ss_dssp EE-ESCHHHHHTC---TTCCEEEECSCCHHHHHHHHHHHHHTTC--EEEEC-CHHHHHHHHHHHHHHHHHHTCCEEECT
T ss_pred eE-ECCHHHHhcC---CCCCEEEEcCCChHHHHHHHHHHHHcCC--cEEec-CcccCHHHHHHHHHHHHHhCCeeeecC
Confidence 11 23443 4432 4679999999886555666777777763 45542 221 22334455676654444
No 456
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.01 E-value=1.1 Score=44.39 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=42.6
Q ss_pred CcEEEEcCC---cchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHH
Q 006034 404 EPVVIVGFG---QMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLL 471 (663)
Q Consensus 404 ~~viI~G~g---~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~ 471 (663)
+.++|.|.+ -+|+.+|+.|. ++|.+|++.+++++..+++.+ .....+..|.+|++-.+
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la----------~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 74 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLD----------QLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVI 74 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHH
Confidence 456777863 59999999998 899999999999877655443 13456677777766543
No 457
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=90.00 E-value=1.5 Score=39.93 Aligned_cols=97 Identities=16% Similarity=0.103 Sum_probs=59.2
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----cCCC---EEEecCCCHHHHHhcC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFP---ILYGDASRPAVLLSAG 474 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~~~~---vi~GD~~~~~~L~~a~ 474 (663)
..++++-+|+|. |.......+ ...+.+|+.+|.|++.++.+++ .+.. .+++|..+ .+....
T Consensus 25 ~~~~vldiG~G~-G~~~~~l~~---------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~ 92 (178)
T 3hm2_A 25 PHETLWDIGGGS-GSIAIEWLR---------STPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR--AFDDVP 92 (178)
T ss_dssp TTEEEEEESTTT-THHHHHHHT---------TSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG--GGGGCC
T ss_pred CCCeEEEeCCCC-CHHHHHHHH---------HCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh--hhhccC
Confidence 445899999997 766655553 1247899999999998877764 2332 77777754 344321
Q ss_pred CCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 006034 475 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 512 (663)
Q Consensus 475 i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~ 512 (663)
++.|.+++...-.. ........+.+.|+-.++....
T Consensus 93 -~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 -DNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp -SCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred -CCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 67898775543322 2223344455666655554443
No 458
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.00 E-value=1.4 Score=47.51 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=50.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHH--------HHHhcCCC----------EEEecC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK--------ESRKLGFP----------ILYGDA 464 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~--------~~~~~~~~----------vi~GD~ 464 (663)
-++|.|+|.|.+|..+|..|. +.|++|++.|.|+++.. .+.+.|.. -+.. .
T Consensus 54 i~kVaVIGaG~MG~~IA~~la----------~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t 122 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFG----------LAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-T 122 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-e
Confidence 368999999999999999998 78999999999999532 22233310 0111 1
Q ss_pred CCHHHHHhcCCCCCcEEEEEcCCHH
Q 006034 465 SRPAVLLSAGITSPKAVMIMYTDKK 489 (663)
Q Consensus 465 ~~~~~L~~a~i~~a~~vv~~~~dd~ 489 (663)
+| ++ .+++||.||.+..+|.
T Consensus 123 ~d---l~--al~~aDlVIeAVpe~~ 142 (460)
T 3k6j_A 123 SD---FH--KLSNCDLIVESVIEDM 142 (460)
T ss_dssp SC---GG--GCTTCSEEEECCCSCH
T ss_pred CC---HH--HHccCCEEEEcCCCCH
Confidence 12 22 3789999999998753
No 459
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=89.99 E-value=0.31 Score=50.28 Aligned_cols=110 Identities=7% Similarity=-0.017 Sum_probs=67.6
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
-++.|+|+|++|+..++.|.+ ..+.+++ +.|+|+++.+.+.+ .+..-.+.| -++++.+ .+.|+|
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~---------~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~--~~~ll~~---~~~D~V 71 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRL---------AGNGEVVAVSSRTLESAQAFANKYHLPKAYDK--LEDMLAD---ESIDVI 71 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHH---------HCSEEEEEEECSCSSTTCC---CCCCSCEESC--HHHHHTC---TTCCEE
T ss_pred eEEEEEechHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHHHcCCCcccCC--HHHHhcC---CCCCEE
Confidence 379999999999999999862 4556666 56999998876665 344423322 2344432 478999
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHcCCCeEEc
Q 006034 482 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAIL 530 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~----l~~~Gad~vi~ 530 (663)
+++++++.. ...+..+-+.+ .++++. +.+.+..+. .++.|.-..+.
T Consensus 72 ~i~tp~~~h-~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 72 YVATINQDH-YKVAKAALLAG--KHVLVEKPFTLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCCcHHH-HHHHHHHHHCC--CeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999988543 44455555554 356663 344444443 35667655443
No 460
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=89.94 E-value=0.26 Score=48.86 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=52.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEE-eCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAF-DLNPSVVKESRK----L--GFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvi-d~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++. +++++..+...+ . ...++.+|.+|++.++++
T Consensus 5 k~vlVTGas~gIG~aia~~l~----------~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLA----------ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ 74 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHH----------HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 46777776 679999999998 789999997 888887665543 2 356788999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 75 ~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 75 QIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 113567776554
No 461
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=89.88 E-value=0.26 Score=50.64 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=53.2
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC---C---CCEEEEeCCh-----HHHHHHH-hcCCCEEEecCCCHHHHH
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV---G---WPFVAFDLNP-----SVVKESR-KLGFPILYGDASRPAVLL 471 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~---~---~~vvvid~d~-----~~~~~~~-~~~~~vi~GD~~~~~~L~ 471 (663)
+++|.|. |-+|+.+++.|. ++ | ++|+++++++ +..+.+. ..+..++.||.+|++.++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~----------~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLL----------AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLA 71 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHH
T ss_pred eEEEECCccHHHHHHHHHHH----------hhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHH
Confidence 5889985 999999999997 43 7 8999999854 2222221 135678999999999988
Q ss_pred hcCCCCCcEEEEEcC
Q 006034 472 SAGITSPKAVMIMYT 486 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~ 486 (663)
++= +++|.||-+..
T Consensus 72 ~~~-~~~d~Vih~A~ 85 (337)
T 1r6d_A 72 REL-RGVDAIVHFAA 85 (337)
T ss_dssp HHT-TTCCEEEECCS
T ss_pred HHh-cCCCEEEECCC
Confidence 763 78898877654
No 462
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=89.87 E-value=0.32 Score=45.93 Aligned_cols=69 Identities=16% Similarity=0.137 Sum_probs=52.1
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-cCCCEEEecCCCHHHHHhcC--CCCCcE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAG--ITSPKA 480 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-~~~~vi~GD~~~~~~L~~a~--i~~a~~ 480 (663)
+++|.|. |.+|+.+++.|. ++ +|+++++++++.+.+.+ .+..++.+|.+|++.++++- ..+.|.
T Consensus 2 ~vlVtGasg~iG~~la~~l~----------~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 69 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALK----------GH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDL 69 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTT----------TS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEE
T ss_pred EEEEEcCCcHHHHHHHHHHH----------hC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCE
Confidence 5788876 789999999997 34 99999999988776654 22278889999998776642 126787
Q ss_pred EEEEc
Q 006034 481 VMIMY 485 (663)
Q Consensus 481 vv~~~ 485 (663)
+|-..
T Consensus 70 vi~~a 74 (207)
T 2yut_A 70 LVHAV 74 (207)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 463
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=89.86 E-value=0.26 Score=48.79 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=52.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH--HHHHHh------cCCCEEEecCCCHHHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV--VKESRK------LGFPILYGDASRPAVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~--~~~~~~------~~~~vi~GD~~~~~~L~~a- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++. .+...+ ....++.+|.+|++.++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 72 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLA----------ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAI 72 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 46788876 678999999998 789999999999876 544332 2356788999999876543
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 73 ~~~~~~~g~iD~lv~nA 89 (258)
T 3a28_C 73 DEAAEKLGGFDVLVNNA 89 (258)
T ss_dssp HHHHHHHTCCCEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 123567766543
No 464
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.85 E-value=0.56 Score=45.81 Aligned_cols=72 Identities=10% Similarity=0.056 Sum_probs=52.2
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecC--CCHHHHHhc
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDA--SRPAVLLSA 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~--~~~~~L~~a 473 (663)
++++|.|. |-+|+.+++.|. ++|++|+++++++++.+...+ ....++..|. +|++.++++
T Consensus 15 k~vlITGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~ 84 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYA----------AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL 84 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHH
Confidence 45777776 789999999998 789999999999988766543 2456777887 887765542
Q ss_pred ------CCCCCcEEEEEc
Q 006034 474 ------GITSPKAVMIMY 485 (663)
Q Consensus 474 ------~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 85 ~~~~~~~~g~id~lv~nA 102 (247)
T 3i1j_A 85 AARVEHEFGRLDGLLHNA 102 (247)
T ss_dssp HHHHHHHHSCCSEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 123567766543
No 465
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=89.82 E-value=0.091 Score=54.19 Aligned_cols=71 Identities=25% Similarity=0.311 Sum_probs=52.6
Q ss_pred CcEEEEc-CCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHH-HHHHh-cCCCEEEecCCCHHHHHhcCCC--CC
Q 006034 404 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV-KESRK-LGFPILYGDASRPAVLLSAGIT--SP 478 (663)
Q Consensus 404 ~~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~-~~~~~-~~~~vi~GD~~~~~~L~~a~i~--~a 478 (663)
.+++|.| .|.+|+.+++.|. +.|++|++++++++.. +.+.+ .+..++.||.+|++.++++ ++ +.
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~ 90 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLL----------ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQL-IGDLQP 90 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHH-HHHHCC
T ss_pred CEEEEeCCccHHHHHHHHHHH----------HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHH-HhccCC
Confidence 4689998 4999999999997 6799999999876431 11221 3567899999999887654 22 47
Q ss_pred cEEEEEc
Q 006034 479 KAVMIMY 485 (663)
Q Consensus 479 ~~vv~~~ 485 (663)
|.||-+.
T Consensus 91 D~vih~A 97 (333)
T 2q1w_A 91 DAVVHTA 97 (333)
T ss_dssp SEEEECC
T ss_pred cEEEECc
Confidence 8887654
No 466
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=89.81 E-value=0.23 Score=49.10 Aligned_cols=72 Identities=7% Similarity=0.101 Sum_probs=51.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHH----HHH---hcCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK----ESR---KLGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~----~~~---~~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. |-+|+.+++.|. +.|++|++++++++..+ .+. .....++.+|.+|++.++++
T Consensus 15 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 84 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVA----------AAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHH----------HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence 46788875 789999999998 78999999999655432 222 12456789999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 85 ~~~~~~~~id~li~~A 100 (265)
T 1h5q_A 85 QIDADLGPISGLIANA 100 (265)
T ss_dssp HHHHHSCSEEEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 234577666554
No 467
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=89.80 E-value=0.17 Score=50.63 Aligned_cols=72 Identities=10% Similarity=0.080 Sum_probs=51.9
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cCCCEEEecCCCHHHHHhcC--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LGFPILYGDASRPAVLLSAG-- 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~~~vi~GD~~~~~~L~~a~-- 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++..+.+.+ ....++.+|.+|++.++++=
T Consensus 35 k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 104 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYA----------QAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQ 104 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHH----------HHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHH
Confidence 45677765 789999999998 789999999998765544332 23567889999998776531
Q ss_pred ----CCCCcEEEEEc
Q 006034 475 ----ITSPKAVMIMY 485 (663)
Q Consensus 475 ----i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 105 ~~~~~g~id~li~~A 119 (279)
T 3ctm_A 105 QEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHSCCSEEEECG
T ss_pred HHHHhCCCCEEEECC
Confidence 13578776543
No 468
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.80 E-value=0.4 Score=49.22 Aligned_cols=118 Identities=11% Similarity=0.066 Sum_probs=68.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCC---hHHHHHHHh-----cCCCEEEecCCCHHHHHhc
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN---PSVVKESRK-----LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d---~~~~~~~~~-----~~~~vi~GD~~~~~~L~~a 473 (663)
.++++|+|.|..|+.++..|. +.|. ++.+++++ +++++.+.+ .+..+..-+..+.+-+.+
T Consensus 148 gk~~lVlGAGGaaraia~~L~----------~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~- 216 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAA----------IEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE- 216 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh-
Confidence 468999999999999999998 6787 79999999 777776654 233344445555322221
Q ss_pred CCCCCcEEEEEcCCHH---HHHHHHHHHHHhCCCCcEEEEecChhhHHH---HHHcCCCeEEcCc
Q 006034 474 GITSPKAVMIMYTDKK---RTIEAVQRLRLAFPAIPIYARAQDMMHLLD---LKKAGATDAILEN 532 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~---~n~~~~~~~r~~~~~~~iia~~~~~~~~~~---l~~~Gad~vi~p~ 532 (663)
.+.++|.+|-+|+-.. .+.....-...+.++.-++=.+.++...+. .++.|+ .+++--
T Consensus 217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~-~~~~Gl 280 (312)
T 3t4e_A 217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGC-KTIDGY 280 (312)
T ss_dssp HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHHTTC-EEECHH
T ss_pred hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCC-eEECcH
Confidence 2446788887776421 110000001122333234445666654444 456677 455544
No 469
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.74 E-value=0.17 Score=48.84 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=30.5
Q ss_pred cEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH
Q 006034 405 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS 447 (663)
Q Consensus 405 ~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~ 447 (663)
.|+|||.|..|..+|..|. +.|++|+|+|++++
T Consensus 4 dV~IIGaGpaGL~aA~~La----------~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALT----------AAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHH----------HCCCCEEEEECCCC
Confidence 4999999999999999998 78999999998764
No 470
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=89.71 E-value=0.59 Score=49.81 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=74.5
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeC----------ChHHHHHHHhc-C-CCEEEecCCCHHH
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDL----------NPSVVKESRKL-G-FPILYGDASRPAV 469 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~----------d~~~~~~~~~~-~-~~vi~GD~~~~~~ 469 (663)
.++++|-|+|++|+.+++.|. +.|.+|+ +.|. |.+.+.++.+. + ..-+ ..+..+.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~----------~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~--~~~~~e~ 285 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAE----------RLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL--DLAPEEV 285 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC--CBCTTTG
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee--eccchhh
Confidence 357999999999999999997 7899998 8898 88887776652 2 1000 2233455
Q ss_pred HHhcCCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEEEecC----hhhHHHHHHcCCCeEEcCch
Q 006034 470 LLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD----MMHLLDLKKAGATDAILENA 533 (663)
Q Consensus 470 L~~a~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~~~~----~~~~~~l~~~Gad~vi~p~~ 533 (663)
|. -++|.++=+...++.| ...++++ ++++|+..-| ++..+.|++.|+ .+.|..
T Consensus 286 ~~----~~~DVliP~A~~n~i~---~~~A~~l--~ak~V~EgAN~p~t~~A~~~L~~~Gi--~~~PD~ 342 (419)
T 3aoe_E 286 FG----LEAEVLVLAAREGALD---GDRARQV--QAQAVVEVANFGLNPEAEAYLLGKGA--LVVPDL 342 (419)
T ss_dssp GG----SSCSEEEECSCTTCBC---HHHHTTC--CCSEEEECSTTCBCHHHHHHHHHHTC--EEECHH
T ss_pred hc----cCceEEEecccccccc---cchHhhC--CceEEEECCCCcCCHHHHHHHHHCCC--EEECHH
Confidence 53 3789777666554333 3466666 4577776543 578889999997 566763
No 471
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.69 E-value=0.34 Score=52.74 Aligned_cols=42 Identities=17% Similarity=0.336 Sum_probs=38.0
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCC-CC-CEEEEeCChH----HHHHHHh
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GW-PFVAFDLNPS----VVKESRK 454 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~-~~-~vvvid~d~~----~~~~~~~ 454 (663)
..+|.|+|.|.+|..+|..|. +. |+ +|+++|.|++ +++.+.+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la----------~~~G~~~V~~~D~~~~~~~~kv~~l~~ 65 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFA----------DAPCFEKVLGFQRNSKSSGYKIEMLNR 65 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHH----------HSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HhCCCCeEEEEECChhHhHHHHHHHHh
Confidence 347999999999999999998 67 99 9999999999 9988876
No 472
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=89.69 E-value=0.3 Score=48.08 Aligned_cols=72 Identities=17% Similarity=0.173 Sum_probs=50.5
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCC-EEEEeCCh--HHHHHHHhc----CCCEEEecCCCH-HHHHhc-
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNP--SVVKESRKL----GFPILYGDASRP-AVLLSA- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~-vvvid~d~--~~~~~~~~~----~~~vi~GD~~~~-~~L~~a- 473 (663)
++++|.|. |-+|+.+++.|. ++|++ |+++++++ +..+.+.+. ...++.+|.+|+ +.++++
T Consensus 6 k~vlVtGas~gIG~~~a~~l~----------~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELV----------KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL 75 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHH----------HCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHH
Confidence 46888875 779999999998 78997 89999886 444555432 356788999997 544332
Q ss_pred -----CCCCCcEEEEEc
Q 006034 474 -----GITSPKAVMIMY 485 (663)
Q Consensus 474 -----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 76 ~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 76 KKIFDQLKTVDILINGA 92 (254)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 123678776544
No 473
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.68 E-value=0.36 Score=48.08 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=53.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh-------cCCCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~-------~~~~vi~GD~~~~~~L~~a-- 473 (663)
++++|.|. +-+|+.+++.|. ++|++|+++++|++..+...+ ....++.+|.+|++-.+++
T Consensus 21 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 90 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFA----------AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR 90 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 45677775 679999999998 789999999999988665432 2466788999998866543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 91 ~~~~~~g~id~lv~nA 106 (266)
T 4egf_A 91 RAAEAFGGLDVLVNNA 106 (266)
T ss_dssp HHHHHHTSCSEEEEEC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123667776654
No 474
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=89.67 E-value=0.24 Score=49.69 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=52.8
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh----c--CCCEEEecCCCHHHHHhc---
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~----~--~~~vi~GD~~~~~~L~~a--- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++.++++++.+...+ . ...++.+|.+|++-++++
T Consensus 27 k~~lVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLA----------VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 34666665 679999999998 789999999999988665442 2 355678999999877653
Q ss_pred ---CCCCCcEEEEEc
Q 006034 474 ---GITSPKAVMIMY 485 (663)
Q Consensus 474 ---~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 97 ~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 97 LDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHTCCCCEEEECC
T ss_pred HHHHCCCCCEEEECC
Confidence 123577776554
No 475
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=89.67 E-value=0.87 Score=46.45 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=79.9
Q ss_pred cEEEEc-CCcchHHHHHHhcccccCCCCCCCCC--CCEEEEeC--ChHHHHH----HHhc---C-CCEEEecCCCHHHHH
Q 006034 405 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDL--NPSVVKE----SRKL---G-FPILYGDASRPAVLL 471 (663)
Q Consensus 405 ~viI~G-~g~~g~~la~~L~~~~~~~~~~~~~~--~~vvvid~--d~~~~~~----~~~~---~-~~vi~GD~~~~~~L~ 471 (663)
+|.|+| .|.+|+.++..|. ..+ .+++++|. ++++.+. +.+. . ..-+.++ +.+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~----------~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~--~~~--- 66 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIA----------LRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG--GYE--- 66 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC--CGG---
T ss_pred EEEEECCCChHHHHHHHHHH----------hCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC--CHH---
Confidence 589999 9999999999886 233 36899999 8876432 2221 1 1123332 222
Q ss_pred hcCCCCCcEEEEEcCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHH-HHcCCC--eEEcC
Q 006034 472 SAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDL-KKAGAT--DAILE 531 (663)
Q Consensus 472 ~a~i~~a~~vv~~~~d---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~~~--~~l-~~~Gad--~vi~p 531 (663)
.+++||.||.+.+- | ..|+. ++..+++.+|+..++. ..||.+. ..+ +..|.+ +|+--
T Consensus 67 --a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv-~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 67 --DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT-TSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp --GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE-CCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred --HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE-eCChHHHHHHHHHHHcCCCHHHeeec
Confidence 26789988877642 2 34444 4455666788866665 5666543 333 344554 67766
Q ss_pred -chHHHHHHHHHHHHhcCCCHHHH
Q 006034 532 -NAETSLQLGSKLLKGFGVMSDDV 554 (663)
Q Consensus 532 -~~~~~~~la~~~~~~~~~~~~~~ 554 (663)
...-..++-..+-+.+++++..+
T Consensus 144 gt~Ld~~r~~~~la~~l~v~~~~v 167 (303)
T 1o6z_A 144 GGRLDSARFRYVLSEEFDAPVQNV 167 (303)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ccchhHHHHHHHHHHHhCcCHHHe
Confidence 44445566666666677766443
No 476
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.66 E-value=0.18 Score=49.71 Aligned_cols=75 Identities=15% Similarity=0.104 Sum_probs=50.9
Q ss_pred CCCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEe-CChHHHH----HHHh--cCCCEEEecCCCHHHHHh
Q 006034 401 EGSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFD-LNPSVVK----ESRK--LGFPILYGDASRPAVLLS 472 (663)
Q Consensus 401 ~~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid-~d~~~~~----~~~~--~~~~vi~GD~~~~~~L~~ 472 (663)
...++++|.|. |-+|+.+++.|. ++|++|++++ +++++.+ ...+ ....++.+|.+|++.+++
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~----------~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 80 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLH----------KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQ 80 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHH----------HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHH
Confidence 34566777775 678999999998 7899999988 5544432 2333 246788999999886654
Q ss_pred c------CCCCCcEEEEEc
Q 006034 473 A------GITSPKAVMIMY 485 (663)
Q Consensus 473 a------~i~~a~~vv~~~ 485 (663)
+ ...+.|.+|-..
T Consensus 81 ~~~~~~~~~g~id~lv~~A 99 (256)
T 3ezl_A 81 AFDKVKAEVGEIDVLVNNA 99 (256)
T ss_dssp HHHHHHHHTCCEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 3 223667776554
No 477
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.62 E-value=0.41 Score=52.50 Aligned_cols=89 Identities=26% Similarity=0.402 Sum_probs=63.3
Q ss_pred CCCcEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEEEEeCChH-HHHHHHhcCCCEEEecCCCHHHHHhcCCCCCc
Q 006034 402 GSEPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRKLGFPILYGDASRPAVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~ 479 (663)
..+|+.++|.|..|.. +|+.|. +.|++|.+.|.++. ..+.+++.|..+..| .+++. +.++|
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~----------~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~~~-----~~~~d 83 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLA----------NEGYQISGSDLAPNSVTQHLTALGAQIYFH--HRPEN-----VLDAS 83 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHH----------HTTCEEEEECSSCCHHHHHHHHTTCEEESS--CCGGG-----GTTCS
T ss_pred cCCEEEEEEEcHhhHHHHHHHHH----------hCCCeEEEEECCCCHHHHHHHHCCCEEECC--CCHHH-----cCCCC
Confidence 3478999999999996 899997 89999999997654 456678889998887 34443 35689
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEEE
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 510 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia~ 510 (663)
.||....=+..|-. ...||+.+ ++++.+
T Consensus 84 ~vV~Spgi~~~~p~-~~~a~~~g--i~v~~~ 111 (494)
T 4hv4_A 84 VVVVSTAISADNPE-IVAAREAR--IPVIRR 111 (494)
T ss_dssp EEEECTTSCTTCHH-HHHHHHTT--CCEEEH
T ss_pred EEEECCCCCCCCHH-HHHHHHCC--CCEEcH
Confidence 88766544444443 34566654 456554
No 478
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=89.61 E-value=0.53 Score=49.25 Aligned_cols=111 Identities=15% Similarity=0.103 Sum_probs=70.6
Q ss_pred CcEEEEcCCcchHH-HHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHhc-CCCEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~-la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~~-~~~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
-+|.|+|+|++|+. .++.|.+ .++.+++ +.|.|+++.+.+.+. +..-.+. +-+++|++. +.|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~--~~~~ll~~~---~vD~ 71 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQ---------MQDIRIVAACDSDLERARRVHRFISDIPVLD--NVPAMLNQV---PLDA 71 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHT---------CTTEEEEEEECSSHHHHGGGGGTSCSCCEES--SHHHHHHHS---CCSE
T ss_pred ceEEEECCCHHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHHhcCCCcccC--CHHHHhcCC---CCCE
Confidence 37999999999995 8898872 4577777 779999999887764 2222232 224556553 4599
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHH----HHHHcCCCeEEcC
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLL----DLKKAGATDAILE 531 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~----~l~~~Gad~vi~p 531 (663)
|+++++++. -...+..+-+.+ .+|++. +.+.+..+ ..++.|.-..+..
T Consensus 72 V~i~tp~~~-H~~~~~~al~aG--khVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 126 (359)
T 3m2t_A 72 VVMAGPPQL-HFEMGLLAMSKG--VNVFVEKPPCATLEELETLIDAARRSDVVSGVGM 126 (359)
T ss_dssp EEECSCHHH-HHHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEEcCCcHH-HHHHHHHHHHCC--CeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 999998753 344455555554 356662 33444433 3455677655544
No 479
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.54 E-value=0.041 Score=56.14 Aligned_cols=95 Identities=12% Similarity=0.024 Sum_probs=57.1
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCC-C-EEEecCCCHHHHHhcCCCCCcEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-P-ILYGDASRPAVLLSAGITSPKAV 481 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~-~-vi~GD~~~~~~L~~a~i~~a~~v 481 (663)
.+|.|+|.|.+|..++..|. +.|++|.+++++++..+...+.|. + -+.-|. .++-.+++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~D~v 66 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ----------QSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKG------YEDVTNTFDVI 66 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HHCTTCEEEESSCEEEEEESSTTSCCEEEEEEE------GGGCCSCEEEE
T ss_pred cEEEEECCCHHHHHHHHHHH----------HCCCeEEEEEeccCcEEEEecCCeeccceecCc------hHhcCCCCCEE
Confidence 36999999999999999997 678999999999765432222221 0 111111 11112689999
Q ss_pred EEEcCCHHHHHHHHHHHHH-hCCCCcEEEEecChh
Q 006034 482 MIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMM 515 (663)
Q Consensus 482 v~~~~dd~~n~~~~~~~r~-~~~~~~iia~~~~~~ 515 (663)
++++..... -.++..++. +.++..|+...|--.
T Consensus 67 ilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~ 100 (294)
T 3g17_A 67 IIAVKTHQL-DAVIPHLTYLAHEDTLIILAQNGYG 100 (294)
T ss_dssp EECSCGGGH-HHHGGGHHHHEEEEEEEEECCSSCC
T ss_pred EEeCCccCH-HHHHHHHHHhhCCCCEEEEeccCcc
Confidence 888876432 223333333 344444555555433
No 480
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=89.54 E-value=0.41 Score=50.08 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=69.5
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEE-EEeCChHHHHHHHh-cCC-CEEEecCCCHHHHHhcCCCCCcE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGF-PILYGDASRPAVLLSAGITSPKA 480 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vv-vid~d~~~~~~~~~-~~~-~vi~GD~~~~~~L~~a~i~~a~~ 480 (663)
-+|.|+|+|.+|+..++.|.+ +..+.+++ +.|.|+++.+.+.+ .+. .-.+.| -++.+++ .+.|+
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~--------~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~--~~~ll~~---~~~D~ 90 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLAN--------TVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYND--YHDLIND---KDVEV 90 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------TCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESS--HHHHHHC---TTCCE
T ss_pred eeEEEECCcHHHHHHHHHHHh--------hCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCE
Confidence 479999999999999998861 14567766 68999999887765 452 223322 2344443 46799
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHcCCCe
Q 006034 481 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATD 527 (663)
Q Consensus 481 vv~~~~dd~~n~~~~~~~r~~~~~~~iia~---~~~~~~~~~l----~~~Gad~ 527 (663)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|...
T Consensus 91 V~i~tp~~~h-~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 91 VIITASNEAH-ADVAVAALNAN--KYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred EEEcCCcHHH-HHHHHHHHHCC--CCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 9999988643 44455555554 357763 3454444433 5567654
No 481
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.52 E-value=0.13 Score=54.01 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=53.4
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH-----HHHHHh------c-CCCEEEecCCCHHHH
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-----VKESRK------L-GFPILYGDASRPAVL 470 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~-----~~~~~~------~-~~~vi~GD~~~~~~L 470 (663)
++|+|.|. |-+|+.+++.|. +.|++|++++++++. .+.+.+ . +..++.||.+|++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 98 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLL----------GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSL 98 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHH----------HCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHH
Confidence 57999997 999999999997 679999999988654 222211 1 567889999999877
Q ss_pred HhcCCC-CCcEEEEEcC
Q 006034 471 LSAGIT-SPKAVMIMYT 486 (663)
Q Consensus 471 ~~a~i~-~a~~vv~~~~ 486 (663)
+++=-+ +.|.||-+..
T Consensus 99 ~~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 99 RRWIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHHHCCSEEEECCS
T ss_pred HHHHHhcCCCEEEECCc
Confidence 654111 4687776543
No 482
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=89.50 E-value=0.3 Score=51.41 Aligned_cols=71 Identities=11% Similarity=0.157 Sum_probs=53.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCCCCCcEEEE
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 483 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~ 483 (663)
++|+|+|.|..|+.+++.++ +.|++++++|.+++... .......+..|.+|.+.+.+.- ++.|.++.
T Consensus 2 ~~Ililg~g~~g~~~~~a~~----------~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~ 68 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAK----------KMGFYVIVLDPTPRSPA--GQVADEQIVAGFFDSERIEDLV-KGSDVTTY 68 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSTTCTT--GGGSSEEEECCTTCHHHHHHHH-HTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCCCCch--hhhCceEEECCCCCHHHHHHHH-hcCCEEEe
Confidence 46999999999999999997 78999999998776421 1122346678888988877654 67887765
Q ss_pred EcCC
Q 006034 484 MYTD 487 (663)
Q Consensus 484 ~~~d 487 (663)
..++
T Consensus 69 ~~e~ 72 (380)
T 3ax6_A 69 DLEH 72 (380)
T ss_dssp SCSC
T ss_pred cccC
Confidence 4443
No 483
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=89.50 E-value=0.23 Score=49.19 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=52.0
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHH-HHHHHh-------cCCCEEEecCCCHHHHHhcC
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRK-------LGFPILYGDASRPAVLLSAG 474 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~-~~~~~~-------~~~~vi~GD~~~~~~L~~a~ 474 (663)
++++|.|. |-+|+.+++.|. ++|++|++++++++. .+.+.+ ....++.+|.+|++.++++=
T Consensus 5 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 74 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALA----------AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHH
Confidence 45777775 689999999998 789999999999876 554432 13456789999998765431
Q ss_pred ------CCCCcEEEEEc
Q 006034 475 ------ITSPKAVMIMY 485 (663)
Q Consensus 475 ------i~~a~~vv~~~ 485 (663)
..+.|.+|-..
T Consensus 75 ~~~~~~~g~iD~lv~~A 91 (260)
T 1x1t_A 75 DNAVRQMGRIDILVNNA 91 (260)
T ss_dssp HHHHHHHSCCSEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 13567776543
No 484
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=89.47 E-value=0.52 Score=48.35 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=60.0
Q ss_pred CcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCC-EEEEeCChHH-HHHH-HhcCCCEEEecCCC-HHHHHhcCCCCCc
Q 006034 404 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSV-VKES-RKLGFPILYGDASR-PAVLLSAGITSPK 479 (663)
Q Consensus 404 ~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~-vvvid~d~~~-~~~~-~~~~~~vi~GD~~~-~~~L~~a~i~~a~ 479 (663)
-+|.|+|+|++|+.+++.+.+ +..+.+ +.+.|.|+++ .+.. ++.+..... .+ ++++++.+-.+.|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~--------~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~---~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLR--------NAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------HCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHh--------hCcCeEEEEEEeCChhhhHHHHHHHcCCCccc---CCHHHHHhccCCCCCc
Confidence 479999999999999999951 124444 4567999887 4444 345554332 23 3445544446789
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCcEEE
Q 006034 480 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 480 ~vv~~~~dd~~n~~~~~~~r~~~~~~~iia 509 (663)
.|+.+++. +.....+..+.+..+..+|+.
T Consensus 74 vV~~atp~-~~h~~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 74 FVFDATSA-SAHVQNEALLRQAKPGIRLID 102 (312)
T ss_dssp EEEECSCH-HHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCh-HHHHHHHHHHHHhCCCCEEEE
Confidence 99999994 455666666666622234554
No 485
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.47 E-value=0.73 Score=47.59 Aligned_cols=76 Identities=22% Similarity=0.333 Sum_probs=56.5
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCCHH---HHHhcCCCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPA---VLLSAGITSP 478 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~---~L~~a~i~~a 478 (663)
..++++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |..+++ .+++.+ ..+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~-g~~ 233 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYAR----------AMGLRVAAVDIDDAKLNLARRLGAEVAV-NARDTDPAAWLQKEI-GGA 233 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHH-SSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCCEEE-eCCCcCHHHHHHHhC-CCC
Confidence 4568999999999999999887 6889999999999999999988876543 344333 233321 268
Q ss_pred cEEEEEcCCHH
Q 006034 479 KAVMIMYTDKK 489 (663)
Q Consensus 479 ~~vv~~~~dd~ 489 (663)
|.++-++...+
T Consensus 234 d~vid~~g~~~ 244 (340)
T 3s2e_A 234 HGVLVTAVSPK 244 (340)
T ss_dssp EEEEESSCCHH
T ss_pred CEEEEeCCCHH
Confidence 88877766543
No 486
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=89.44 E-value=0.16 Score=51.69 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=50.6
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChH-HHHHHHhcCCCEEEecCCCHHHHHhcCCC--CCcE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRKLGFPILYGDASRPAVLLSAGIT--SPKA 480 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~-~~~~~~~~~~~vi~GD~~~~~~L~~a~i~--~a~~ 480 (663)
+++|.|. |-+|+.+++.|. +.|++|++++++++ ..+.+ ..+..++.+|.+|++.++++ ++ +.|.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~ 69 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLL----------ARGLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERA-FREFRPTH 69 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------TTTCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHH-HHHHCCSE
T ss_pred EEEEEeCCcHHHHHHHHHHH----------HCCCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHH-HHhcCCCE
Confidence 5889987 999999999998 78999999998432 21111 13577899999999877654 22 5677
Q ss_pred EEEEc
Q 006034 481 VMIMY 485 (663)
Q Consensus 481 vv~~~ 485 (663)
++-+.
T Consensus 70 vi~~a 74 (311)
T 2p5y_A 70 VSHQA 74 (311)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 76554
No 487
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.39 E-value=0.42 Score=48.54 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HHHHHhcCCCCCc
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPK 479 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~~L~~a~i~~a~ 479 (663)
..++++|.|. |.+|+..++.++ ..|.+|++++.++++.+.+++.|...+. |..+ ++..++. +.+|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~----------~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~--~~~d 191 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVAR----------AMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAW--GGLD 191 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH----------HTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHT--TSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHhcCCCEEE-ECCcchhHHHHh--cCce
Confidence 3468999998 999999999887 6889999999999998888887766543 5555 5555554 6789
Q ss_pred EEEEEcCC
Q 006034 480 AVMIMYTD 487 (663)
Q Consensus 480 ~vv~~~~d 487 (663)
.++- .+.
T Consensus 192 ~vid-~g~ 198 (302)
T 1iz0_A 192 LVLE-VRG 198 (302)
T ss_dssp EEEE-CSC
T ss_pred EEEE-CCH
Confidence 8887 776
No 488
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=89.39 E-value=1.2 Score=38.55 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=65.9
Q ss_pred CCCCEEEEeCChHHHHHHH----hcC-CCEEEecCCCHHHHHhcCCCCCcEEEEEcCC-HHHHHHHHHHHHHhCCCCcEE
Q 006034 435 VGWPFVAFDLNPSVVKESR----KLG-FPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 508 (663)
Q Consensus 435 ~~~~vvvid~d~~~~~~~~----~~~-~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d-d~~n~~~~~~~r~~~~~~~ii 508 (663)
...++.++|.|+...+.++ +.| +.+..-+ +-.+.++...-.+.|.+++-.+- +..-...+..+|+.+|+++++
T Consensus 13 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 91 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRDVATRLDALAIYDVRVSE-TDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLI 91 (135)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHHTSSEEEEEEC-GGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEE
T ss_pred CCcEEEEEcCCHHHHHHHHHHHhhcCCeEEEEec-cHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEE
Confidence 3457899999888755544 356 6665432 33456666666778988776543 334566778889988888888
Q ss_pred EEecC--hhhHHHHHHcCCCeEEcCc
Q 006034 509 ARAQD--MMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 509 a~~~~--~~~~~~l~~~Gad~vi~p~ 532 (663)
....+ .+......+.|++.++...
T Consensus 92 ~~s~~~~~~~~~~~~~~g~~~~l~KP 117 (135)
T 3snk_A 92 AVSDELTSEQTRVLVRMNASDWLHKP 117 (135)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEESS
T ss_pred EEeCCCCHHHHHHHHHcCcHhhccCC
Confidence 76664 4566677889999876654
No 489
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.38 E-value=0.18 Score=51.16 Aligned_cols=71 Identities=11% Similarity=-0.017 Sum_probs=50.8
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhc-CC----C-EEEecCCCHHHHHhcCCC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF----P-ILYGDASRPAVLLSAGIT 476 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~-~~----~-vi~GD~~~~~~L~~a~i~ 476 (663)
.++++|+|.|.+|+.+++.|. +.| +|++.++++++.+.+.+. +. . .+..|.+|. +...+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~----------~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----~~~~~ 192 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELA----------KDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----DVDLD 192 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHT----------SSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----TCCCT
T ss_pred CCEEEEECchHHHHHHHHHHH----------HCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----HHhhC
Confidence 357999999999999999997 778 999999999887766532 00 0 011233331 34567
Q ss_pred CCcEEEEEcCCH
Q 006034 477 SPKAVMIMYTDK 488 (663)
Q Consensus 477 ~a~~vv~~~~dd 488 (663)
++|.+|.+++..
T Consensus 193 ~~DilVn~ag~~ 204 (287)
T 1nvt_A 193 GVDIIINATPIG 204 (287)
T ss_dssp TCCEEEECSCTT
T ss_pred CCCEEEECCCCC
Confidence 899998887753
No 490
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=89.38 E-value=0.96 Score=39.16 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=61.7
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCC--HHHHHHHHHHHHHhCCCCcE
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD--KKRTIEAVQRLRLAFPAIPI 507 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~d--d~~n~~~~~~~r~~~~~~~i 507 (663)
....++.++|.|+...+.+. +.|+.+..--.+-.+.++...-.+.|.+++-.+- +......+..+|+. +++++
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~i 85 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPI 85 (140)
T ss_dssp -CCCEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCE
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCE
Confidence 34567889998887655443 3577765312223444444433568888777553 23456677778877 88888
Q ss_pred EEEecCh--hhHHHHHHcCCCeEEcCc
Q 006034 508 YARAQDM--MHLLDLKKAGATDAILEN 532 (663)
Q Consensus 508 ia~~~~~--~~~~~l~~~Gad~vi~p~ 532 (663)
++...+. +......+.|++.++.-.
T Consensus 86 i~ls~~~~~~~~~~~~~~g~~~~l~kp 112 (140)
T 3cg0_A 86 IFITSSQDVETFQRAKRVNPFGYLAKP 112 (140)
T ss_dssp EEEECCCCHHHHHHHHTTCCSEEEEES
T ss_pred EEEecCCCHHHHHHHHhcCCCEEEeCC
Confidence 8776644 445577789999876543
No 491
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=89.37 E-value=0.16 Score=51.68 Aligned_cols=67 Identities=21% Similarity=0.186 Sum_probs=51.0
Q ss_pred cEEEEcC-CcchHHHHHHhcccccCCCCCCCC--CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHHHHhcCC-CCCcE
Q 006034 405 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGI-TSPKA 480 (663)
Q Consensus 405 ~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~--~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i-~~a~~ 480 (663)
+++|.|. |-+|+.+++.|. +. |++|++++++++..+ +..++.+|.+|++.++++=- .+.|.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~ 65 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLA----------EKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDA 65 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHH----------HHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CEEEEcCCcHHHHHHHHHHH----------HhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcE
Confidence 4788985 999999999997 45 789999998765422 57889999999988766411 16788
Q ss_pred EEEEcC
Q 006034 481 VMIMYT 486 (663)
Q Consensus 481 vv~~~~ 486 (663)
||-+..
T Consensus 66 vih~a~ 71 (317)
T 3ajr_A 66 IFHLAG 71 (317)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 876553
No 492
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.35 E-value=0.91 Score=46.66 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCCcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHhcCCCEEEecCCC-HH---HHHhcCCC
Q 006034 402 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PA---VLLSAGIT 476 (663)
Q Consensus 402 ~~~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~-~~---~L~~a~i~ 476 (663)
..++++|.|. |.+|+.+++.+. ..|.+|+++|.++++.+.+++.+...+ -|.++ ++ .+++..-.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~----------~~G~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAK----------LKGCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTT
T ss_pred CCCEEEEecCCCcHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHhcCCcEE-EecCCHHHHHHHHHHHhCC
Confidence 3468999998 999999999997 789999999999999888877665543 36665 32 33332225
Q ss_pred CCcEEEEEcCC
Q 006034 477 SPKAVMIMYTD 487 (663)
Q Consensus 477 ~a~~vv~~~~d 487 (663)
..|.++-+.+.
T Consensus 214 ~~d~vi~~~g~ 224 (333)
T 1v3u_A 214 GYDCYFDNVGG 224 (333)
T ss_dssp CEEEEEESSCH
T ss_pred CCeEEEECCCh
Confidence 78988777765
No 493
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.35 E-value=0.65 Score=48.40 Aligned_cols=72 Identities=13% Similarity=0.175 Sum_probs=57.1
Q ss_pred CcEEEEcCCcchHHH-HHHh-cccccCCCCCCCCCCC-EEEEeCChH---HHHHHHhcCCCEEEecCCCHHH--HHhcCC
Q 006034 404 EPVVIVGFGQMGQVL-ANLL-SAPLASGSDGNTVGWP-FVAFDLNPS---VVKESRKLGFPILYGDASRPAV--LLSAGI 475 (663)
Q Consensus 404 ~~viI~G~g~~g~~l-a~~L-~~~~~~~~~~~~~~~~-vvvid~d~~---~~~~~~~~~~~vi~GD~~~~~~--L~~a~i 475 (663)
++|+|.|.|.+|... ++.+ + ..|.+ |+++|.+++ +.+.+++.|...+ |..+++. +++. -
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k----------~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~-~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVD----------DKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDV-Y 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHC----------TTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHH-S
T ss_pred CEEEEECCCHHHHHHHHHHHHH----------HcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHh-C
Confidence 689999999999999 9988 7 77887 999999998 8898888887766 6655332 4444 2
Q ss_pred CCCcEEEEEcCCH
Q 006034 476 TSPKAVMIMYTDK 488 (663)
Q Consensus 476 ~~a~~vv~~~~dd 488 (663)
..+|.++-+++.+
T Consensus 241 gg~Dvvid~~g~~ 253 (357)
T 2b5w_A 241 EQMDFIYEATGFP 253 (357)
T ss_dssp CCEEEEEECSCCH
T ss_pred CCCCEEEECCCCh
Confidence 3789888888775
No 494
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.26 E-value=0.64 Score=48.49 Aligned_cols=76 Identities=22% Similarity=0.311 Sum_probs=57.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHhcCCCEEEecCCCH--HHHHhc-CCCC
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRP--AVLLSA-GITS 477 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~--~~L~~a-~i~~ 477 (663)
..++|+|.|.|.+|...++.++ .. |.+|+++|.++++.+.+++.|...+. |..++ +.+++. +=..
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak----------~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLK----------VMTPATVIALDVKEEKLKLAERLGADHVV-DARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH----------HHCCCEEEEEESSHHHHHHHHHTTCSEEE-ETTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HcCCCeEEEEeCCHHHHHHHHHhCCCEEE-eccchHHHHHHHHhCCCC
Confidence 3468999999999999999886 56 88999999999999999988866543 44443 334443 2236
Q ss_pred CcEEEEEcCCH
Q 006034 478 PKAVMIMYTDK 488 (663)
Q Consensus 478 a~~vv~~~~dd 488 (663)
+|.++=+++.+
T Consensus 255 ~Dvvid~~G~~ 265 (359)
T 1h2b_A 255 VNVAMDFVGSQ 265 (359)
T ss_dssp EEEEEESSCCH
T ss_pred CcEEEECCCCc
Confidence 89888888775
No 495
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=89.25 E-value=0.32 Score=49.00 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=52.3
Q ss_pred CcEEEEcC-CcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh------cC-CCEEEecCCCHHHHHhc--
Q 006034 404 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK------LG-FPILYGDASRPAVLLSA-- 473 (663)
Q Consensus 404 ~~viI~G~-g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~------~~-~~vi~GD~~~~~~L~~a-- 473 (663)
+.++|.|. |-+|+.+++.|. ++|++|++++++++..+...+ .. ..++.+|.+|++-.+++
T Consensus 34 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 103 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALS----------AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA 103 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence 45677775 679999999998 789999999999987665543 12 36789999999876543
Q ss_pred ----CCCCCcEEEEEc
Q 006034 474 ----GITSPKAVMIMY 485 (663)
Q Consensus 474 ----~i~~a~~vv~~~ 485 (663)
...+.|.+|-..
T Consensus 104 ~~~~~~g~iD~lvnnA 119 (281)
T 4dry_A 104 AVRAEFARLDLLVNNA 119 (281)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 113557666543
No 496
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=89.24 E-value=2.1 Score=37.80 Aligned_cols=97 Identities=13% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCCCEEEEeCChHHHHHHH----hcCCCEEE--ecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHh--CCC
Q 006034 434 TVGWPFVAFDLNPSVVKESR----KLGFPILY--GDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLA--FPA 504 (663)
Q Consensus 434 ~~~~~vvvid~d~~~~~~~~----~~~~~vi~--GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~--~~~ 504 (663)
+++.+|.+||.|+...+.++ +.|+.++. .|+ .+.++...-.+.|.++.-..=. ..=...+...|+. .++
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g--~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ 87 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDG--LTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKH 87 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSH--HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCH--HHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCC
Confidence 56788999999998754443 47776442 233 3445544445789776655432 3345677777764 467
Q ss_pred CcEEEEec--ChhhHHHHHHcCCCeEEcCc
Q 006034 505 IPIYARAQ--DMMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 505 ~~iia~~~--~~~~~~~l~~~Gad~vi~p~ 532 (663)
++||.... +.++.....++|+|..+.-.
T Consensus 88 ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP 117 (134)
T 3to5_A 88 LPVLMITAEAKREQIIEAAQAGVNGYIVKP 117 (134)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCCEEEESS
T ss_pred CeEEEEECCCCHHHHHHHHHCCCCEEEECC
Confidence 78776554 45666778899999776554
No 497
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.22 E-value=1 Score=45.56 Aligned_cols=91 Identities=18% Similarity=0.186 Sum_probs=62.9
Q ss_pred CCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCC-CEEEEeCCh------------------HHHHHHHh------cCC
Q 006034 403 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP------------------SVVKESRK------LGF 457 (663)
Q Consensus 403 ~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~-~vvvid~d~------------------~~~~~~~~------~~~ 457 (663)
+.||+|+|.|-.|..+++.|. ..|. ++.++|.|. .+++.+++ ...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La----------~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v 105 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLT----------RCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDV 105 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTS
T ss_pred CCeEEEECcCHHHHHHHHHHH----------HcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCc
Confidence 458999999999999999997 5564 799999887 44444432 122
Q ss_pred --CEEEecCCCHHHHHhc-------C---CCCCcEEEEEcCCHHHHHHHHHHHHHhCC
Q 006034 458 --PILYGDASRPAVLLSA-------G---ITSPKAVMIMYTDKKRTIEAVQRLRLAFP 503 (663)
Q Consensus 458 --~vi~GD~~~~~~L~~a-------~---i~~a~~vv~~~~dd~~n~~~~~~~r~~~~ 503 (663)
..+..+.++++.+.+. . .+++|.||-++++-+.-..+-..+++.+.
T Consensus 106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~ 163 (292)
T 3h8v_A 106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQ 163 (292)
T ss_dssp EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCC
Confidence 2344455554444321 1 26899998888887776777777887763
No 498
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=89.22 E-value=0.75 Score=42.39 Aligned_cols=92 Identities=20% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCCcEEEEcCCcchHHHHHHhcccccCCCCCCCCCCCEEEEeCChHHHHHHHh--------cCCCEEEecCCCHHHHHhc
Q 006034 402 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--------LGFPILYGDASRPAVLLSA 473 (663)
Q Consensus 402 ~~~~viI~G~g~~g~~la~~L~~~~~~~~~~~~~~~~vvvid~d~~~~~~~~~--------~~~~vi~GD~~~~~~L~~a 473 (663)
..++++-+|+|. |....... +.+.+|+.+|.|++.++.+++ ....++.+|..+ .+.+
T Consensus 33 ~~~~vldiG~G~-G~~~~~l~-----------~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~- 97 (192)
T 1l3i_A 33 KNDVAVDVGCGT-GGVTLELA-----------GRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE--ALCK- 97 (192)
T ss_dssp TTCEEEEESCTT-SHHHHHHH-----------TTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH--HHTT-
T ss_pred CCCEEEEECCCC-CHHHHHHH-----------HhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH--hccc-
Confidence 456899999998 66655544 334789999999998877765 245677777654 2332
Q ss_pred CCCCCcEEEEEcCCHHHHHHHHHHHHHhCCCCcEEE
Q 006034 474 GITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYA 509 (663)
Q Consensus 474 ~i~~a~~vv~~~~dd~~n~~~~~~~r~~~~~~~iia 509 (663)
.++.|.+++........-.+....+.+.|+-.++.
T Consensus 98 -~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 98 -IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp -SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEE
T ss_pred -CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEE
Confidence 24789776554322222223333444555534444
No 499
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.19 E-value=0.6 Score=48.44 Aligned_cols=76 Identities=17% Similarity=0.316 Sum_probs=56.7
Q ss_pred CCCcEEEEcCC-cchHHHHHHhcccccCCCCCCCC-CCCEEEEeCChHHHHHHHhcCCCEEEecCCCHHH---HHhcCC-
Q 006034 402 GSEPVVIVGFG-QMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAV---LLSAGI- 475 (663)
Q Consensus 402 ~~~~viI~G~g-~~g~~la~~L~~~~~~~~~~~~~-~~~vvvid~d~~~~~~~~~~~~~vi~GD~~~~~~---L~~a~i- 475 (663)
..++++|.|.| .+|+.+++.+. .. |.+|+++|.++++.+.+++.+...+. |.++++. +++..-
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~----------~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAK----------AVSGATIIGVDVREEAVEAAKRAGADYVI-NASMQDPLAEIRRITES 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH----------HHTCCEEEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCccHHHHHHHHHH----------HcCCCeEEEEcCCHHHHHHHHHhCCCEEe-cCCCccHHHHHHHHhcC
Confidence 34689999998 99999999997 66 89999999999998888877765433 5555443 333322
Q ss_pred CCCcEEEEEcCCH
Q 006034 476 TSPKAVMIMYTDK 488 (663)
Q Consensus 476 ~~a~~vv~~~~dd 488 (663)
...|.++-+.+.+
T Consensus 239 ~~~d~vi~~~g~~ 251 (347)
T 1jvb_A 239 KGVDAVIDLNNSE 251 (347)
T ss_dssp SCEEEEEESCCCH
T ss_pred CCceEEEECCCCH
Confidence 4789888777764
No 500
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=89.17 E-value=0.54 Score=39.05 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=59.9
Q ss_pred CCEEEEeCChHHHHHHH----hcCCCEEEecCCCHHHHHhcCCCCCcEEEEEcCCH-HHHHHHHHHHHHhC--CCCcEEE
Q 006034 437 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAF--PAIPIYA 509 (663)
Q Consensus 437 ~~vvvid~d~~~~~~~~----~~~~~vi~GD~~~~~~L~~a~i~~a~~vv~~~~dd-~~n~~~~~~~r~~~--~~~~iia 509 (663)
.++.++|.|+...+.+. +.|+.+..-+ +..+.++...-.+.|.+++-.+-+ ......+...|+.. +++++++
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~v~~~~-~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~ 80 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFKVIWLV-DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVL 80 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcEEEEec-CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEE
Confidence 45788888887654443 3567665432 334444444334678777765432 33456777788875 7788888
Q ss_pred EecChhhHHHHHHcCCCeEEcCc
Q 006034 510 RAQDMMHLLDLKKAGATDAILEN 532 (663)
Q Consensus 510 ~~~~~~~~~~l~~~Gad~vi~p~ 532 (663)
.....+.. ...+.|++.++...
T Consensus 81 ~~~~~~~~-~~~~~g~~~~l~kp 102 (119)
T 2j48_A 81 FLGEPPVD-PLLTAQASAILSKP 102 (119)
T ss_dssp EESSCCSS-HHHHHHCSEECSSC
T ss_pred EeCCCCch-hhhhcCHHHhccCC
Confidence 77665555 77889999876554
Done!