Your job contains 1 sequence.
>006037
MSRSPSFSVKSELSLKPDPERMQRWVVAFCTIRFDLEQGQLIEDCYPPGCLTQDEELEVA
YSSFPDSVSQHQNRSSIHDCIFFFRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLL
KRSKSFSSSKGSRYFYGYVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPL
YFDVGKKAIEHIASYVSIWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAA
SVAPFLPYNQSIPQGLFHDSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAV
ASLVSLIAPLLCSIDFRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPH
IVSVGSPAPNSNRVAFASRASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCL
MTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLA
PFGPYFRTTTPSEGSSPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRF
LKGPNFMPWFQRRRAAAEQEQHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQE
IQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLLFNPERAALLQRTPELTKPLG
THL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006037
(663 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031506 - symbol:AT1G73930 "AT1G73930" species... 2039 2.0e-250 2
RGD|1306064 - symbol:Dennd6a "DENN/MADD domain containing... 383 1.3e-64 3
UNIPROTKB|F1MBQ4 - symbol:FAM116A "Uncharacterized protei... 386 1.1e-63 3
UNIPROTKB|Q8IWF6 - symbol:DENND6A "Protein DENND6A" speci... 382 1.6e-63 3
MGI|MGI:2442980 - symbol:Dennd6a "DENN/MADD domain contai... 383 2.1e-63 3
UNIPROTKB|G3X7L3 - symbol:FAM116B "Uncharacterized protei... 397 6.0e-63 3
UNIPROTKB|Q5F3L4 - symbol:DENND6A "Protein DENND6A" speci... 380 1.1e-62 3
UNIPROTKB|F1SGK8 - symbol:FAM116A "Uncharacterized protei... 380 1.2e-60 3
UNIPROTKB|Q8NEG7 - symbol:DENND6B "Protein DENND6B" speci... 376 2.1e-60 3
MGI|MGI:1916690 - symbol:Dennd6b "DENN/MADD domain contai... 379 1.1e-59 3
ZFIN|ZDB-GENE-030131-9382 - symbol:dennd6b "DENN/MADD dom... 369 1.4e-59 3
RGD|1308012 - symbol:Dennd6b "DENN/MADD domain containing... 378 3.9e-59 3
UNIPROTKB|F1NGG5 - symbol:FAM116A "Uncharacterized protei... 380 5.7e-59 3
UNIPROTKB|F1P1F1 - symbol:FAM116B "Uncharacterized protei... 376 3.7e-55 3
DICTYBASE|DDB_G0280481 - symbol:DDB_G0280481 "unknown" sp... 194 3.3e-49 5
WB|WBGene00018777 - symbol:F53H1.3 species:6239 "Caenorha... 300 2.4e-48 3
ZFIN|ZDB-GENE-041010-63 - symbol:dennd6aa "DENN/MADD doma... 380 4.4e-45 2
>TAIR|locus:2031506 [details] [associations]
symbol:AT1G73930 "AT1G73930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002684 InterPro:IPR012860 Pfam:PF07792
EMBL:AC016662 InterPro:IPR024224 PANTHER:PTHR13677 OMA:ISPLKYC
EMBL:AK317311 IPI:IPI00526737 PIR:H96766 RefSeq:NP_001031278.1
RefSeq:NP_177533.1 UniGene:At.43715 PRIDE:Q9C9B4
EnsemblPlants:AT1G73930.1 EnsemblPlants:AT1G73930.2 GeneID:843730
KEGG:ath:AT1G73930 TAIR:At1g73930 InParanoid:Q9C9B4
PhylomeDB:Q9C9B4 ProtClustDB:CLSN2679900 Genevestigator:Q9C9B4
Uniprot:Q9C9B4
Length = 623
Score = 2039 (722.8 bits), Expect = 2.0e-250, Sum P(2) = 2.0e-250
Identities = 387/519 (74%), Positives = 445/519 (85%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YVFNRQRHDERLKRGGEQKS+VILSH P+SSVFRPLLQI+GPLYFDVG KAIEHIA YVS
Sbjct: 106 YVFNRQRHDERLKRGGEQKSVVILSHTPYSSVFRPLLQIIGPLYFDVGNKAIEHIAGYVS 165
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
+WP+PVPGKLMELPIGNAMLKVNLPPAHSLPLE+G+L EESA+S+AP LP NQS+PQGLF
Sbjct: 166 MWPAPVPGKLMELPIGNAMLKVNLPPAHSLPLENGILYEESASSMAPLLPTNQSVPQGLF 225
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
HD+DLFG +RG IGEPIL+IAPTPPQC EAVA LVSL+APL CS+DFR
Sbjct: 226 HDADLFGIYRGLLLQLWTLWELLLIGEPILIIAPTPPQCSEAVACLVSLVAPLFCSVDFR 285
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAPNSNRVAFA 377
PYFTIHDP FA LNSL+EGDTFPPMVLGVTN+FFLKALR IPH+VSVG+PAPNSNRVAF
Sbjct: 286 PYFTIHDPGFARLNSLREGDTFPPMVLGVTNIFFLKALRNIPHVVSVGTPAPNSNRVAFT 345
Query: 378 SRASSGKISGRPEGFGLQQLSLK-FSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATT 436
SR S+GK+S +PEG G+QQLSL+ FSP++LLN VKLRR+GPLCLMTEHKEA+W++Y+A T
Sbjct: 346 SR-SAGKLSVKPEGLGVQQLSLRRFSPTNLLNAVKLRRDGPLCLMTEHKEAVWTTYSAVT 404
Query: 437 KPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGSS 496
KPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYF+ PS+GSS
Sbjct: 405 KPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFQVNAPSDGSS 464
Query: 497 PFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFXXXXXX 556
P+V PP LP F A+EFLS+L RGVGKFLSKRM+SNW DLYRRFL+GPNF PWF
Sbjct: 465 PYVTPPALPSFGADEFLSNLSGRGVGKFLSKRMKSNWPDLYRRFLRGPNFSPWFQRRRAV 524
Query: 557 XXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEIQLQQSGCAATDSAEI 616
RLWR ARM+TD++Q+ ++M+ELE+VD+FNA+E+H+ +E++ +SG A DS
Sbjct: 525 AEQEQRRLWRLARMKTDMRQITSQMNELEAVDSFNAIEKHISEEVKSLESGGGA-DSEGT 583
Query: 617 CQKLKGDLLAVFNVLPKDVQQLLLFNPERAALLQRTPEL 655
QKLK DL AVF+VLPKD+QQLLL NP+RA+LLQ EL
Sbjct: 584 FQKLKKDLQAVFSVLPKDMQQLLLLNPQRASLLQDPSEL 622
Score = 396 (144.5 bits), Expect = 2.0e-250, Sum P(2) = 2.0e-250
Identities = 69/90 (76%), Positives = 83/90 (92%)
Query: 1 MSRSPSFSVKSELSLKPDPERMQRWVVAFCTIRFDLEQGQLIEDCYPPGCLTQDEELEVA 60
MSRSPSFSVK ELS+KPDPE ++RW+ AFC +RFDLEQGQL+E+CYPP CL+Q+EE+EV+
Sbjct: 1 MSRSPSFSVKPELSIKPDPESLKRWIHAFCIMRFDLEQGQLLEECYPPDCLSQEEEIEVS 60
Query: 61 YSSFPDSVSQHQNRSSIHDCIFFFRFQRHK 90
++SFPDSVSQH NRSSIHDCIFFFRF+R K
Sbjct: 61 FNSFPDSVSQHHNRSSIHDCIFFFRFRRPK 90
>RGD|1306064 [details] [associations]
symbol:Dennd6a "DENN/MADD domain containing 6A" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=IEA;ISO] [GO:0055037 "recycling endosome"
evidence=IEA;ISO] [GO:2000049 "positive regulation of cell-cell
adhesion mediated by cadherin" evidence=IEA;ISO] RGD:1306064
InterPro:IPR012860 Pfam:PF07792 CTD:201627 InterPro:IPR024224
PANTHER:PTHR13677 OMA:ISPLKYC GeneTree:ENSGT00390000005529
IPI:IPI00911364 RefSeq:NP_001127939.1 UniGene:Rn.4177
Ensembl:ENSRNOT00000016233 GeneID:306229 KEGG:rno:306229
UCSC:RGD:1306064 NextBio:655649 ArrayExpress:D4A544 Uniprot:D4A544
Length = 602
Score = 383 (139.9 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 86/232 (37%), Positives = 127/232 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V
Sbjct: 150 YVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVD 209
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+PVPGK + LPI ++KV +P H P + L++++ + LP
Sbjct: 210 RWPAPVPGKTLHLPIMGLVMKVRIPTCHDKP-GTTQLTQQADTHTSIILP--------TV 260
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF F +GEP++V+AP+P + E V +LV+ I+PL DFR
Sbjct: 261 HEVDLFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFR 320
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAP 369
PYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 321 PYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP 370
Score = 251 (93.4 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 69/219 (31%), Positives = 109/219 (49%)
Query: 423 EHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPF 482
+ K +++SY D I+ +L R E+ SV ILRR+FLELT +F+ P
Sbjct: 390 DSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSV----ILRRYFLELTQSFIIPL 445
Query: 483 GPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFL 541
Y + P + S SP+ PP L F EF+ +L+ G L+ ++ +W+ LYR+FL
Sbjct: 446 ERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEK--TGPQLTSGIKGDWIGLYRQFL 503
Query: 542 KGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEI 601
K PNF WF L +A D+ I K +E+E+VD ++ L+Q
Sbjct: 504 KSPNFDGWFKTRRKEMTHKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQAD 563
Query: 602 QLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+ ++ D+ E KL+ + A+ LP+D+Q +LL
Sbjct: 564 R--ENLPVKPDTVE---KLRTHIDAIILALPEDLQGILL 597
Score = 122 (48.0 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP C LT E+ + Y SFPDS N + D F
Sbjct: 58 WLHCVCVVGFDLELGQAVEVIYPQHCKLTDKEKTNICYLSFPDS-----NSGCLGDTQFC 112
Query: 84 FRFQR 88
FRF++
Sbjct: 113 FRFRQ 117
>UNIPROTKB|F1MBQ4 [details] [associations]
symbol:FAM116A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000049 "positive regulation of cell-cell adhesion
mediated by cadherin" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR012860 Pfam:PF07792
InterPro:IPR024224 PANTHER:PTHR13677 OMA:ISPLKYC
GeneTree:ENSGT00390000005529 EMBL:DAAA02054302 EMBL:DAAA02054303
EMBL:DAAA02054304 EMBL:DAAA02054305 EMBL:DAAA02054306
IPI:IPI00706062 RefSeq:XP_002697043.1 Ensembl:ENSBTAT00000024525
GeneID:537662 KEGG:bta:537662 CTD:100922285 NextBio:20877183
Uniprot:F1MBQ4
Length = 608
Score = 386 (140.9 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 87/234 (37%), Positives = 128/234 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V
Sbjct: 153 YVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVD 212
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLP--LESGMLSEESAASVAPFLPYNQSIPQG 255
WP+PVPGK + LPI ++KV +P H P + L+++ A ++ LP
Sbjct: 213 RWPAPVPGKTLYLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQGDAHISVILP-------- 264
Query: 256 LFHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSID 315
H+ DLF F +GEP++V+AP+P + E V +LV+ I+PL D
Sbjct: 265 TVHEVDLFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSD 324
Query: 316 FRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAP 369
FRPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 325 FRPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP 376
Score = 249 (92.7 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 69/219 (31%), Positives = 106/219 (48%)
Query: 423 EHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPF 482
+ K +++SY D I+ +L R E+ SV ILRR+FLELT +F+ P
Sbjct: 396 DSKPGVYTSYKPYLNRDEDIIKQLQKGVQQKRPSEAQSV----ILRRYFLELTQSFIIPL 451
Query: 483 GPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFL 541
Y + P + S SP+ PP L F EF+ +L+ G L+ R++ +W+ LYR FL
Sbjct: 452 ERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEK--TGPQLTSRIKGDWIGLYRHFL 509
Query: 542 KGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEI 601
K PNF WF L +A D+ K +E+E+VD ++ L+Q
Sbjct: 510 KSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWTQKHTEVETVDLVLKLKNKLLQAD 569
Query: 602 QLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+ D+ E KL+ + A+ LP+D+Q +LL
Sbjct: 570 REHLP--VKPDTME---KLRTHIDAIILALPEDLQGILL 603
Score = 112 (44.5 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP LT E+ + Y SFPDS N + D F
Sbjct: 61 WLHCVCVVGFDLELGQAVEVIYPQHSRLTDKEKTNICYLSFPDS-----NSGCLGDTQFC 115
Query: 84 FRFQR 88
FRF++
Sbjct: 116 FRFRQ 120
>UNIPROTKB|Q8IWF6 [details] [associations]
symbol:DENND6A "Protein DENND6A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:2000049 "positive regulation of cell-cell adhesion mediated by
cadherin" evidence=IDA] GO:GO:2000049 GO:GO:0055037
InterPro:IPR012860 Pfam:PF07792 GO:GO:0017112 CTD:201627
eggNOG:NOG275729 HOGENOM:HOG000000674 HOVERGEN:HBG055587
OrthoDB:EOG4N30NQ InterPro:IPR024224 PANTHER:PTHR13677
EMBL:AK074156 EMBL:AC114480 EMBL:BC040291 EMBL:BC054343
EMBL:AK092288 IPI:IPI00291723 RefSeq:NP_689891.1 UniGene:Hs.91085
ProteinModelPortal:Q8IWF6 IntAct:Q8IWF6 STRING:Q8IWF6
PhosphoSite:Q8IWF6 DMDM:74728180 PaxDb:Q8IWF6 PRIDE:Q8IWF6
Ensembl:ENST00000311128 GeneID:201627 KEGG:hsa:201627
UCSC:uc003dja.3 GeneCards:GC03M057611 H-InvDB:HIX0003395
H-InvDB:HIX0023340 HGNC:HGNC:26635 neXtProt:NX_Q8IWF6
PharmGKB:PA144596431 InParanoid:Q8IWF6 OMA:ISPLKYC ChiTaRS:FAM116A
GenomeRNAi:201627 NextBio:90182 Bgee:Q8IWF6 CleanEx:HS_FAM116A
Genevestigator:Q8IWF6 Uniprot:Q8IWF6
Length = 608
Score = 382 (139.5 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 85/234 (36%), Positives = 128/234 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V
Sbjct: 153 YVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVD 212
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLP--LESGMLSEESAASVAPFLPYNQSIPQG 255
WP+PVPGK + LPI ++KV +P H P + L+++ +++ LP
Sbjct: 213 RWPAPVPGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILP-------- 264
Query: 256 LFHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSID 315
H+ D+F F +GEP++V+AP+P + E V +LV+ I+PL D
Sbjct: 265 TVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSD 324
Query: 316 FRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAP 369
FRPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 325 FRPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP 376
Score = 254 (94.5 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 70/219 (31%), Positives = 107/219 (48%)
Query: 423 EHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPF 482
+ K +++SY D I+ +L R E+ SV ILRR+FLELT +F+ P
Sbjct: 396 DSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSV----ILRRYFLELTQSFIIPL 451
Query: 483 GPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFL 541
Y + P + S SP+ PP L F EF+ +L+ G L+ R++ +W+ LYR FL
Sbjct: 452 ERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEK--TGPQLTSRIKGDWIGLYRHFL 509
Query: 542 KGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEI 601
K PNF WF L +A D+ I K +E+E+VD ++ L+Q
Sbjct: 510 KSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQAD 569
Query: 602 QLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+ D+ E KL+ + A+ LP+D+Q +LL
Sbjct: 570 REHLP--VKPDTME---KLRTHIDAIILALPEDLQGILL 603
Score = 111 (44.1 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP LT E+ + Y SFPDS N + D F
Sbjct: 61 WLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDS-----NSGCLGDTQFC 115
Query: 84 FRFQR 88
FRF++
Sbjct: 116 FRFRQ 120
>MGI|MGI:2442980 [details] [associations]
symbol:Dennd6a "DENN/MADD domain containing 6A"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:2000049
"positive regulation of cell-cell adhesion mediated by cadherin"
evidence=ISO] MGI:MGI:2442980 GO:GO:2000049 GO:GO:0055037
InterPro:IPR012860 Pfam:PF07792 GO:GO:0017112 CTD:201627
eggNOG:NOG275729 HOVERGEN:HBG055587 OrthoDB:EOG4N30NQ
InterPro:IPR024224 PANTHER:PTHR13677 OMA:ISPLKYC EMBL:AK131163
EMBL:AK033036 EMBL:AK054197 EMBL:AK054295 EMBL:AK080327
EMBL:AK132219 EMBL:AK135953 EMBL:AK163396 EMBL:BC025603
EMBL:BC031553 IPI:IPI00468916 IPI:IPI00849716 IPI:IPI00849917
IPI:IPI00850567 RefSeq:NP_001127937.1 RefSeq:NP_666081.1
UniGene:Mm.260512 ProteinModelPortal:Q8BH65 PhosphoSite:Q8BH65
PaxDb:Q8BH65 PRIDE:Q8BH65 Ensembl:ENSMUST00000037585 GeneID:211922
KEGG:mmu:211922 UCSC:uc007ssv.1 UCSC:uc007ssx.2 UCSC:uc007ssy.2
GeneTree:ENSGT00390000005529 InParanoid:Q8BH65 NextBio:373387
Bgee:Q8BH65 Genevestigator:Q8BH65 Uniprot:Q8BH65
Length = 605
Score = 383 (139.9 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 87/232 (37%), Positives = 125/232 (53%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V
Sbjct: 150 YVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVD 209
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+PVPGK + LPI ++KV +P H P + M+ A + SI
Sbjct: 210 RWPAPVPGKTLHLPIMGLVMKVRIPTCHDKPGTTQMVQLTQQADT------HTSIILPTV 263
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF F +GEP++V+AP+P + E V +LV+ I+PL DFR
Sbjct: 264 HEVDLFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFR 323
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAP 369
PYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 324 PYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP 373
Score = 250 (93.1 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 70/219 (31%), Positives = 108/219 (49%)
Query: 423 EHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPF 482
+ K +++SY D I+ +L R E+ SV ILRR+FLELT +F+ P
Sbjct: 393 DSKPGVYTSYKPYLNRDEEIIKQLQKGIQQKRPSEAQSV----ILRRYFLELTQSFIIPL 448
Query: 483 GPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFL 541
Y + P + S SP+ PP L F EF+ +L+ G L+ ++ +W+ LYR+FL
Sbjct: 449 ERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEK--TGPQLTSGIKGDWIGLYRQFL 506
Query: 542 KGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEI 601
K PNF WF L +A D+ I K +E+E+VD ++ L+Q
Sbjct: 507 KSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQAG 566
Query: 602 QLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+ +S D+ E KL+ + A+ LP D+Q +LL
Sbjct: 567 R--ESLPVKPDTVE---KLRTHIDAIILALPDDLQGILL 600
Score = 112 (44.5 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP LT E+ + Y SFPDS N + D F
Sbjct: 58 WLHCVCVVGFDLELGQAVEVIYPQHSKLTDKEKTNICYLSFPDS-----NSGCLGDTQFC 112
Query: 84 FRFQR 88
FRF++
Sbjct: 113 FRFRQ 117
>UNIPROTKB|G3X7L3 [details] [associations]
symbol:FAM116B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR012860 Pfam:PF07792
InterPro:IPR024224 PANTHER:PTHR13677 GeneTree:ENSGT00390000005529
OMA:SFPDSYS EMBL:DAAA02015049 Ensembl:ENSBTAT00000034474
Uniprot:G3X7L3
Length = 580
Score = 397 (144.8 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 91/230 (39%), Positives = 127/230 (55%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV+LS PF +F+ LL ++ P +FD +E + + +
Sbjct: 128 YVYFRQVKDSSVKRGYFQKSLVLLSRLPFVRLFQALLGLVAPEFFDKLAPCLEAVCNEID 187
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+P PG+ + LP+ +L+V++P P ESG L E S LP +P
Sbjct: 188 QWPAPAPGRTLSLPVMGVVLQVHIPSRADTP-ESGPL-EPSGHET--LLPAPVVLPS--V 241
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF FR +GEP+LV+AP+P E V +L S + PL D+R
Sbjct: 242 HELDLFRCFRPVLAHVQLLWELMLLGEPLLVLAPSPAVSSEMVLALTSCLQPLKFCCDYR 301
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSP 367
PYFTIHD +F + + P +VLGVTN FF+K L+ PHI+ VG P
Sbjct: 302 PYFTIHDSEFKEFTTRTQAP--PNVVLGVTNPFFIKTLQHWPHILRVGEP 349
Score = 227 (85.0 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 67/231 (29%), Positives = 111/231 (48%)
Query: 410 VKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRR 469
VKL++ L + + K ++++Y A D ++L RL+ G+ ++ S V +LRR
Sbjct: 359 VKLKKPSRLKTL-DTKPGLYTAYTAHLHRDKALLRRLLK-GLQ---KKRPSDVQTAVLRR 413
Query: 470 HFLELTTNFLAPFGPYFRTTTP-SEGSSPFVDPPTLPPFNANEFLSSLQARGVGKFLSKR 528
H LELT +F+ P Y + P +G P+ PP + PF ++FL SL+ G L+
Sbjct: 414 HLLELTQSFIIPLEHYMASLMPLQKGIVPWKTPPQIRPFRQDDFLQSLERSGPQ--LTCV 471
Query: 529 MRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVD 588
++ +WL LYRRF K P+F W+ L +A +I+ + SE+E VD
Sbjct: 472 LKGDWLGLYRRFFKSPHFDGWYRQRHREMTQKLEALHLEAICEANIEIWMKDKSEVEVVD 531
Query: 589 TFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLL 639
+ L++ Q AT ++ + + LPKD+Q +L
Sbjct: 532 LILKLRERLVRAQGHQLPVKEAT-----LKRARLYIDTAIGSLPKDLQAVL 577
Score = 105 (42.0 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 26/69 (37%), Positives = 34/69 (49%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y SFPDS S + D
Sbjct: 32 RFSAWLECVCVVTFDLELGQALELVYPSDFQLTDKEKSSICYLSFPDSHS-----GCLGD 86
Query: 80 CIFFFRFQR 88
F FR ++
Sbjct: 87 TQFSFRIRQ 95
>UNIPROTKB|Q5F3L4 [details] [associations]
symbol:DENND6A "Protein DENND6A" species:9031 "Gallus
gallus" [GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
GO:GO:0055037 GO:GO:0005085 InterPro:IPR012860 Pfam:PF07792
EMBL:AJ851636 IPI:IPI00601493 RefSeq:NP_001012799.1
UniGene:Gga.48193 GeneID:416006 KEGG:gga:416006 CTD:201627
eggNOG:NOG275729 HOGENOM:HOG000000674 HOVERGEN:HBG055587
InParanoid:Q5F3L4 OrthoDB:EOG4N30NQ NextBio:20819524
InterPro:IPR024224 PANTHER:PTHR13677 Uniprot:Q5F3L4
Length = 584
Score = 380 (138.8 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 86/229 (37%), Positives = 129/229 (56%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ +FR +L+ + P YF+ + +E + S V
Sbjct: 129 YVYFRQVRDKSLKRGYFQKSLVLISKLPYIHLFRTVLKQIAPEYFEKSEAFLEAVCSDVD 188
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP PVPG+++ LPI ++K+ +P P + ++ A + ++P
Sbjct: 189 RWPPPVPGEVLHLPIMGVVMKLRIPTYRDKPGTTPVVQNMHQADAQ----ISMTLPT--V 242
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPL-LCSIDF 316
H+ DLF F +GEP++V+AP+P + E V +LVS I+PL CS DF
Sbjct: 243 HEVDLFRCFCPVFFHIQMLWELVLLGEPLVVMAPSPAESSETVLALVSCISPLKYCS-DF 301
Query: 317 RPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVG 365
RPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G
Sbjct: 302 RPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIG 348
Score = 226 (84.6 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 67/239 (28%), Positives = 113/239 (47%)
Query: 403 PSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVV 462
P + VK+++ L + + K +++SY D I+ +L R E+ S
Sbjct: 353 PGDVPKQVKVKKLKNLKTL-DSKPGVYTSYKPYLDKDEEIVKQLQKGVQQKRPTEAQSA- 410
Query: 463 NNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGV 521
ILRR+FLELT +F+ P Y + P + SP+ PP L F+ ++F+ +L+
Sbjct: 411 ---ILRRYFLELTESFIIPLERYVASLMPLQKCISPWKSPPQLRHFSQDDFMKTLEK--A 465
Query: 522 GKFLSKRMRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKM 581
G L+ ++ +W+ LYR FLK PNF WF L +A ++ K
Sbjct: 466 GPQLTSGLKGDWIGLYRHFLKSPNFDGWFRSRQKEMTQNLEALHLEALCNENLVFWSQKH 525
Query: 582 SELESVDTFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+E+E+VD ++ L+Q + TD+ + KL+ + + LP D+Q +LL
Sbjct: 526 TEVETVDLVLKLKNKLLQADREHLP--VKTDTLK---KLQTHIRDIILALPDDLQDILL 579
Score = 130 (50.8 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 20 ERMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIH 78
+R W+ C + FDLE GQ +E YPP LT E+ + Y SFPDS N +
Sbjct: 32 DRFSAWLHCVCVVGFDLELGQAVEVIYPPHSKLTDKEKTNICYLSFPDS-----NSGCLG 86
Query: 79 DCIFFFRFQR 88
D F FRF+R
Sbjct: 87 DTQFCFRFRR 96
>UNIPROTKB|F1SGK8 [details] [associations]
symbol:FAM116A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000049 "positive regulation of cell-cell adhesion
mediated by cadherin" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR012860 Pfam:PF07792
InterPro:IPR024224 PANTHER:PTHR13677 OMA:ISPLKYC
GeneTree:ENSGT00390000005529 EMBL:CU463874 EMBL:CU467952
Ensembl:ENSSSCT00000012548 ArrayExpress:F1SGK8 Uniprot:F1SGK8
Length = 608
Score = 380 (138.8 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 85/234 (36%), Positives = 128/234 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V
Sbjct: 153 YVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVD 212
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGML--SEESAASVAPFLPYNQSIPQG 255
WP+PVPGK + LPI ++KV +P H P + ++ +++ ++ LP
Sbjct: 213 QWPAPVPGKTLHLPIMGIVMKVRIPTCHDKPGTTQLVQSTQQGDTHISVILP-------- 264
Query: 256 LFHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSID 315
H+ DLF F +GEP++V+AP+P + E V +LV+ I+PL D
Sbjct: 265 TVHEVDLFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSD 324
Query: 316 FRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAP 369
FRPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 325 FRPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP 376
Score = 249 (92.7 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 69/219 (31%), Positives = 106/219 (48%)
Query: 423 EHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPF 482
+ K +++SY D I+ +L R E+ SV ILRR+FLELT +F+ P
Sbjct: 396 DSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSV----ILRRYFLELTQSFIIPL 451
Query: 483 GPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFL 541
Y + P + S SP+ PP L F EF+ +L+ G L+ R++ +W+ LYR FL
Sbjct: 452 ERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEK--TGPQLTSRIKGDWIGLYRHFL 509
Query: 542 KGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQEI 601
K PNF WF L +A D+ K +E+E+VD ++ L+Q
Sbjct: 510 KSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWTQKHTEVETVDLVLKLKNKLLQAD 569
Query: 602 QLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+ D+ E KL+ + A+ LP+D+Q +LL
Sbjct: 570 REHLP--VKPDTME---KLRTHIDAIILALPEDLQGILL 603
Score = 91 (37.1 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 24/65 (36%), Positives = 31/65 (47%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGCLT-QDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP L Q + Y S PDS N + D F
Sbjct: 61 WLHCVCVVGFDLELGQAVETVYPRTHLCYQKDSHNSCYLSSPDS-----NSGCLGDTQFC 115
Query: 84 FRFQR 88
FRF++
Sbjct: 116 FRFRQ 120
>UNIPROTKB|Q8NEG7 [details] [associations]
symbol:DENND6B "Protein DENND6B" species:9606 "Homo
sapiens" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IDA]
GO:GO:0055037 InterPro:IPR012860 Pfam:PF07792 GO:GO:0017112
eggNOG:NOG275729 HOGENOM:HOG000000674 HOVERGEN:HBG055587
OrthoDB:EOG4N30NQ InterPro:IPR024224 PANTHER:PTHR13677
EMBL:CT009622 EMBL:CR559946 EMBL:CR759740 EMBL:CR932343
EMBL:CR932344 EMBL:BC031069 IPI:IPI00386146 RefSeq:NP_001001794.3
UniGene:Hs.530380 ProteinModelPortal:Q8NEG7 IntAct:Q8NEG7
DMDM:74760209 PRIDE:Q8NEG7 Ensembl:ENST00000413817 GeneID:414918
KEGG:hsa:414918 UCSC:uc011arv.1 CTD:414918 GeneCards:GC22M050750
HGNC:HGNC:32690 HPA:HPA018934 HPA:HPA021653 HPA:HPA029570
neXtProt:NX_Q8NEG7 PharmGKB:PA144596432 InParanoid:Q8NEG7
OMA:SFPDSYS GenomeRNAi:414918 NextBio:108668 ArrayExpress:Q8NEG7
Bgee:Q8NEG7 CleanEx:HS_FAM116B Genevestigator:Q8NEG7
GermOnline:ENSG00000205593 Uniprot:Q8NEG7
Length = 585
Score = 376 (137.4 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 86/230 (37%), Positives = 123/230 (53%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV++S PF +F+ LL ++ P YFD +E + S +
Sbjct: 133 YVYFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQALLSLIAPEYFDKLAPCLEAVCSEID 192
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+P PG+ + LP+ +++V +P ES + ++ P S+
Sbjct: 193 QWPAPAPGQTLNLPVMGVVVQVRIPSRVDKS-ESSPPKQFDQENLLPAPVVLASV----- 246
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF FR +GEP+LV+AP+P E V +L S + PL DFR
Sbjct: 247 HELDLFRCFRPVLTHMQTLWELMLLGEPLLVLAPSPDVSSEMVLALTSCLQPLRFCCDFR 306
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSP 367
PYFTIHD +F + + P +VLGVTN FF+K L+ PHI+ VG P
Sbjct: 307 PYFTIHDSEFKEFTTRTQAP--PNVVLGVTNPFFIKTLQHWPHILRVGEP 354
Score = 236 (88.1 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 68/231 (29%), Positives = 112/231 (48%)
Query: 410 VKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRR 469
VKL++ L + + K ++++Y A D ++L RL+ R + V + +LRR
Sbjct: 364 VKLKKPSRLKTL-DTKPGLYTAYTAHLHRDKALLKRLLKGVQKKRPSD----VQSALLRR 418
Query: 470 HFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKR 528
H LELT +F+ P Y + P + S +P+ PP + PF+ ++FL SL+ G L+
Sbjct: 419 HLLELTQSFIIPLEHYMASLMPLQKSITPWKTPPQIQPFSQDDFLRSLEH--AGPQLTCI 476
Query: 529 MRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVD 588
++ +WL LYRRF K P+F W+ L +A +I+ + SE+E VD
Sbjct: 477 LKGDWLGLYRRFFKSPHFDGWYRQRHKEMALKLEALHLEAICEANIETWMKDKSEVEVVD 536
Query: 589 TFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLL 639
+ L++ Q AT Q+ + + V LPKD+Q +L
Sbjct: 537 LVLKLREKLVRAQGHQLPVKEAT-----LQRAQLYIETVIGSLPKDLQAVL 582
Score = 104 (41.7 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 26/69 (37%), Positives = 34/69 (49%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y SFPDS S + D
Sbjct: 37 RFSAWLECVCVVTFDLELGQALELVYPNDFRLTDKEKSSICYLSFPDSHS-----GCLGD 91
Query: 80 CIFFFRFQR 88
F FR ++
Sbjct: 92 TQFSFRMRQ 100
>MGI|MGI:1916690 [details] [associations]
symbol:Dennd6b "DENN/MADD domain containing 6B"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
MGI:MGI:1916690 GO:GO:0055037 EMBL:CH466550 InterPro:IPR012860
Pfam:PF07792 GO:GO:0017112 eggNOG:NOG275729 HOGENOM:HOG000000674
HOVERGEN:HBG055587 OrthoDB:EOG4N30NQ InterPro:IPR024224
PANTHER:PTHR13677 GeneTree:ENSGT00390000005529 CTD:414918
OMA:SFPDSYS EMBL:AK006427 EMBL:AK154949 EMBL:BC139003
IPI:IPI00762621 RefSeq:NP_081357.2 UniGene:Mm.482128
ProteinModelPortal:Q9D9V7 PRIDE:Q9D9V7 Ensembl:ENSMUST00000078953
GeneID:69440 KEGG:mmu:69440 InParanoid:B2RSU3 NextBio:329456
Bgee:Q9D9V7 Genevestigator:Q9D9V7 GermOnline:ENSMUSG00000015377
Uniprot:Q9D9V7
Length = 585
Score = 379 (138.5 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 85/230 (36%), Positives = 126/230 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV++S PF +F+ LL ++ P YF+ +E + + +
Sbjct: 133 YVYFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQSLLSLIAPEYFEKLAPCLEAVCNEID 192
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+PVPG+ + LPI +++V +P LES + ++ P S+
Sbjct: 193 QWPAPVPGQTLNLPIMGVVIQVRIPSRVD-KLESSPPKQCDQENLLPAPVVLTSV----- 246
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF FR +GEP++V+AP+P E V +L S + PL DFR
Sbjct: 247 HELDLFRCFRPVLTHVQTLWELMLLGEPLVVLAPSPDVSSELVLALTSCLQPLKFCCDFR 306
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSP 367
PYFTIHD +F L + + P +VLGVTN FF+K L+ PH++ +G P
Sbjct: 307 PYFTIHDSEFKELTTRTQAP--PNVVLGVTNPFFIKTLQHWPHVLRIGEP 354
Score = 227 (85.0 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 66/231 (28%), Positives = 109/231 (47%)
Query: 410 VKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRR 469
VKL++ L + + K +++SY A D ++L RL+ R + V + +LRR
Sbjct: 364 VKLKKPSRLKTL-DTKPGLYTSYTAHLHRDKALLKRLLKGVQKKRPWD----VQSALLRR 418
Query: 470 HFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKR 528
H LELT +F+ P Y + P + + +P+ PP + PF ++FL SL+ G L+
Sbjct: 419 HLLELTQSFIIPLEHYMASLMPLQKNITPWKSPPQICPFRQDDFLRSLEH--AGPQLTCI 476
Query: 529 MRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVD 588
++ +WL LYRRF K P+F W+ L +A +I+ + SE+E VD
Sbjct: 477 LKGDWLGLYRRFFKSPHFDGWYRQRHKEMAQKLEALHLEAICEANIEAWMKDKSEVEVVD 536
Query: 589 TFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLL 639
+ L++ G Q+ + + V LPKD+Q +L
Sbjct: 537 LVLKLREKLVRA-----QGHQLPVKEVTLQRAQLYIDTVIGSLPKDLQAVL 582
Score = 102 (41.0 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y +FPDS S + D
Sbjct: 37 RFSAWLECVCVVTFDLELGQALELVYPSDFRLTDKEKSSICYLAFPDSHS-----GCLGD 91
Query: 80 CIFFFRFQR 88
F FR ++
Sbjct: 92 TQFSFRMRQ 100
>ZFIN|ZDB-GENE-030131-9382 [details] [associations]
symbol:dennd6b "DENN/MADD domain containing 6B"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-030131-9382 InterPro:IPR012860 Pfam:PF07792
HOVERGEN:HBG055587 InterPro:IPR024224 PANTHER:PTHR13677
EMBL:BC044201 IPI:IPI00508121 RefSeq:NP_956359.1 UniGene:Dr.114689
GeneID:337436 KEGG:dre:337436 CTD:337436 InParanoid:Q803T4
NextBio:20812238 ArrayExpress:Q803T4 Uniprot:Q803T4
Length = 575
Score = 369 (135.0 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 79/228 (34%), Positives = 127/228 (55%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV++S PF ++F LLQ++ P YF+ + +E + + +
Sbjct: 125 YVYFRQVKDATVKRGYFQKSLVVVSRLPFVNLFHSLLQVIAPEYFEKLEPCLETVCNEID 184
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+PVPG+ + LP+ ++++ +P E + ++ ++ LP +P
Sbjct: 185 QWPAPVPGQTLNLPVMGVVMQIRIPSKVETA-EGSPVKQQQTENL---LPAPTVLPS--V 238
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF F+ +GEP++++AP+P E V +LVS I PL D+R
Sbjct: 239 HELDLFKCFQSVLIHVQMLWELMLLGEPVVIMAPSPTVSSETVLALVSSIDPLHYFGDYR 298
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVG 365
PYFTIHD +F + + P ++LGVTN FF+K + PHI+ +G
Sbjct: 299 PYFTIHDSEFKEYTTRTQAP--PNVILGVTNPFFIKTFQSWPHIIRLG 344
Score = 223 (83.6 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 67/242 (27%), Positives = 111/242 (45%)
Query: 399 LKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEES 458
LK S L VK+++ L + + K I+++Y D +++ RL+ R E
Sbjct: 346 LKMS-GDLPKQVKIKKLAKLKTL-DTKTGIYTAYKTFLHKDKTLIKRLLKGIQKKRPSE- 402
Query: 459 MSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQ 517
V + ILRRH LE T +F+ P Y T P + S SP+ PP + FN +EF+ +L+
Sbjct: 403 ---VQSAILRRHLLEQTQSFILPLEQYLETLMPPQRSVSPWKTPPQIRSFNQDEFMKTLE 459
Query: 518 ARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQL 577
G ++ ++ LYRRF K PNF W+ L +A D+
Sbjct: 460 QAGP----QLTLKGDFTGLYRRFFKSPNFDGWYRFRHREMSQKVECLHLEAICAADLLTW 515
Query: 578 IAKMSELESVDTFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQ 637
SE+E VD + L++ + Q E+ ++L+ + + + LP+D+Q
Sbjct: 516 TKDKSEVEIVDLILKLREKLMRARKHQ-----LPVKEELLERLEQSIQTIISSLPEDLQT 570
Query: 638 LL 639
+L
Sbjct: 571 VL 572
Score = 117 (46.2 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 30/85 (35%), Positives = 40/85 (47%)
Query: 5 PSFSVKSELSLKPDPERMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSS 63
PS +V + R W+ C + FDLE GQ IE YP LT+ E+ + Y S
Sbjct: 13 PSKAVATTAEFSEPWSRFSAWLECVCVVTFDLELGQAIELVYPHDVKLTEKEKTSICYLS 72
Query: 64 FPDSVSQHQNRSSIHDCIFFFRFQR 88
FPDS S + D F FR ++
Sbjct: 73 FPDSYS-----GCLGDTQFSFRLRQ 92
>RGD|1308012 [details] [associations]
symbol:Dennd6b "DENN/MADD domain containing 6B" species:10116
"Rattus norvegicus" [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA;ISO] RGD:1308012 InterPro:IPR012860
Pfam:PF07792 OrthoDB:EOG4N30NQ InterPro:IPR024224 PANTHER:PTHR13677
GeneTree:ENSGT00390000005529 CTD:414918 OMA:SFPDSYS EMBL:CH474027
IPI:IPI00366461 RefSeq:NP_001102219.1 UniGene:Rn.48823
Ensembl:ENSRNOT00000051347 GeneID:362983 KEGG:rno:362983
NextBio:682028 Uniprot:D3ZAE3
Length = 585
Score = 378 (138.1 bits), Expect = 3.9e-59, Sum P(3) = 3.9e-59
Identities = 84/230 (36%), Positives = 126/230 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV++S PF +F+ LL ++ P YF+ +E + + +
Sbjct: 133 YVYFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQSLLSLIAPEYFEKLAPCLEAVCNEID 192
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP+PVPG+ + LP+ +++V +P LES + ++ P S+
Sbjct: 193 QWPAPVPGQTLNLPVMGVVIQVRIPSRVD-KLESSPPKQCDQENLLPAPVVLTSV----- 246
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF FR +GEP++V+AP+P E V +L S + PL DFR
Sbjct: 247 HELDLFRCFRPVLTHVQTLWELMLLGEPLVVLAPSPDVSSELVLALTSCLQPLKFCCDFR 306
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSP 367
PYFTIHD +F L + + P +VLGVTN FF+K L+ PH++ +G P
Sbjct: 307 PYFTIHDSEFKELTTRTQAP--PNVVLGVTNPFFIKTLQHWPHVLRIGEP 354
Score = 223 (83.6 bits), Expect = 3.9e-59, Sum P(3) = 3.9e-59
Identities = 65/231 (28%), Positives = 110/231 (47%)
Query: 410 VKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRR 469
VKL++ L + + K +++SY A D ++L RL+ R + V + +LRR
Sbjct: 364 VKLKKPSRLKTL-DTKPGLYTSYTAHLHRDKALLKRLLKGIQKKRPWD----VQSALLRR 418
Query: 470 HFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKR 528
+ LELT +F+ P Y + P + + +P+ PP + PF ++FL SL+ G L+
Sbjct: 419 YLLELTQSFIIPLEHYMASLMPLQKNITPWKSPPQICPFRQDDFLQSLEH--AGPQLTCI 476
Query: 529 MRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVD 588
++ +WL LYRRF K P+F W+ L +A +I+ + SE+E VD
Sbjct: 477 LKGDWLGLYRRFFKSPHFDGWYRQRHKEMAQKLEALHLEAICEANIEAWMKDKSEVEVVD 536
Query: 589 TFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLL 639
+ L++ G Q+++ + V LPKD+Q +L
Sbjct: 537 LVLKLREKLVRA-----QGHQLPVKEVTLQRVQLYIDTVIGSLPKDLQAVL 582
Score = 102 (41.0 bits), Expect = 3.9e-59, Sum P(3) = 3.9e-59
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y +FPDS S + D
Sbjct: 37 RFSAWLECVCVVTFDLELGQALELVYPSDFRLTDKEKSNICYLAFPDSHS-----GCLGD 91
Query: 80 CIFFFRFQR 88
F FR ++
Sbjct: 92 TQFSFRMRQ 100
>UNIPROTKB|F1NGG5 [details] [associations]
symbol:FAM116A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:2000049 "positive regulation of cell-cell
adhesion mediated by cadherin" evidence=IEA] InterPro:IPR012860
Pfam:PF07792 IPI:IPI00601493 InterPro:IPR024224 PANTHER:PTHR13677
OMA:ISPLKYC GeneTree:ENSGT00390000005529 EMBL:AADN02014021
EMBL:AADN02014022 EMBL:AADN02014023 Ensembl:ENSGALT00000009076
Uniprot:F1NGG5
Length = 529
Score = 380 (138.8 bits), Expect = 5.7e-59, Sum P(3) = 5.7e-59
Identities = 86/229 (37%), Positives = 129/229 (56%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ +FR +L+ + P YF+ + +E + S V
Sbjct: 74 YVYFRQVRDKSLKRGYFQKSLVLISKLPYIHLFRTVLKQIAPEYFEKSEAFLEAVCSDVD 133
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP PVPG+++ LPI ++K+ +P P + ++ A + ++P
Sbjct: 134 RWPPPVPGEVLHLPIMGVVMKLRIPTYRDKPGTTPVVQNMHQADAQ----ISMTLPT--V 187
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPL-LCSIDF 316
H+ DLF F +GEP++V+AP+P + E V +LVS I+PL CS DF
Sbjct: 188 HEVDLFRCFCPVFFHIQMLWELVLLGEPLVVMAPSPAESSETVLALVSCISPLKYCS-DF 246
Query: 317 RPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVG 365
RPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G
Sbjct: 247 RPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIG 293
Score = 227 (85.0 bits), Expect = 5.7e-59, Sum P(3) = 5.7e-59
Identities = 67/239 (28%), Positives = 113/239 (47%)
Query: 403 PSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVV 462
P + VK+++ L + + K +++SY D I+ +L R E+ S
Sbjct: 298 PGDVPKQVKVKKLKNLKTL-DSKPGVYTSYKPYLNKDEEIVKQLQKGVQQKRPTEAQSA- 355
Query: 463 NNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSLQARGV 521
ILRR+FLELT +F+ P Y + P + SP+ PP L F+ ++F+ +L+
Sbjct: 356 ---ILRRYFLELTESFIIPLERYVASLMPLQKCISPWKSPPQLRHFSQDDFMKTLEK--A 410
Query: 522 GKFLSKRMRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKM 581
G L+ ++ +W+ LYR FLK PNF WF L +A ++ K
Sbjct: 411 GPQLTSGLKGDWIGLYRHFLKSPNFDGWFRSRQKEMTQKLEALHLEALCNENLVFWSQKH 470
Query: 582 SELESVDTFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLL 640
+E+E+VD ++ L+Q + TD+ + KL+ + + LP D+Q +LL
Sbjct: 471 TEVETVDLVLKLKNKLLQADREHLP--VKTDTLK---KLQTHIRDIILALPDDLQDILL 524
Score = 73 (30.8 bits), Expect = 5.7e-59, Sum P(3) = 5.7e-59
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 46 YPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFFFRFQR 88
YPP LT E+ + Y SFPDS N + D F FRF+R
Sbjct: 3 YPPHSKLTDKEKTNICYLSFPDS-----NSGCLGDTQFCFRFRR 41
>UNIPROTKB|F1P1F1 [details] [associations]
symbol:FAM116B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR024224 PANTHER:PTHR13677
GeneTree:ENSGT00390000005529 OMA:SFPDSYS EMBL:AADN02039841
IPI:IPI00604151 Ensembl:ENSGALT00000022367 Uniprot:F1P1F1
Length = 553
Score = 376 (137.4 bits), Expect = 3.7e-55, Sum P(3) = 3.7e-55
Identities = 84/228 (36%), Positives = 129/228 (56%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D +KRG QKSLV++S P+ ++F+ LLQ++ P YFD + +E + + +
Sbjct: 99 YVYFRQVKDSSMKRGYFQKSLVLVSRLPYVNLFQSLLQLIAPEYFDKLEPCLEAVCNEID 158
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLF 257
WP PVPG+ + LP+ +++V +P P S + + + ++ LP +P
Sbjct: 159 QWPPPVPGQTLNLPVMGVVIQVRIPSRVDKP-GSSPVKQFNQENL---LPAPLVLPS--I 212
Query: 258 HDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
H+ DLF F+ +GEPI+V+AP+P E V +L S +APL D+R
Sbjct: 213 HELDLFRCFQPVLIHVQMLWELMLLGEPIVVMAPSPTVSSEMVLALTSCLAPLRYCCDYR 272
Query: 318 PYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVG 365
PYFTIHD +F + + P +V+GVTN FF+K L+ PHI+ VG
Sbjct: 273 PYFTIHDSEFKEYTTRTQAP--PNIVVGVTNPFFIKTLQHWPHILRVG 318
Score = 217 (81.4 bits), Expect = 3.7e-55, Sum P(3) = 3.7e-55
Identities = 67/243 (27%), Positives = 115/243 (47%)
Query: 399 LKFSPSSLLNVVKLRREGPL-CLMTEHKEAIWSSYAATTKPDTSILNRLIDAGMSPRVEE 457
LK S L VK+++ L L T+ I++SY D +++ RL+ R E
Sbjct: 320 LKMS-GDLPKQVKVKKLTKLKTLDTKPALGIYTSYKTFLHKDKTLIKRLLKGIQRKRPSE 378
Query: 458 SMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVDPPTLPPFNANEFLSSL 516
V + +LRRH LELT +F+ P Y + P + + +P+ +PP + PF ++F+ +L
Sbjct: 379 ----VQSALLRRHLLELTQSFIIPLEHYIASLMPLQRAITPWKNPPQIRPFRQDDFMKTL 434
Query: 517 QARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQ 576
+ G L+ ++ +WL LYRRF + PNF W+ L +A +I
Sbjct: 435 EH--AGPQLTCVLKGDWLGLYRRFFRSPNFDGWYRQRHKEMTQKLEALHLEAICEANIVA 492
Query: 577 LIAKMSELESVDTFNAVERHLIQEIQLQQSGCAATDSAEICQKLKGDLLAVFNVLPKDVQ 636
+ SE+E VD + L++ + Q E Q++ + + + LP+D+Q
Sbjct: 493 WMKDKSEVEIVDLVLKLREKLVRA-RCQHLPV----KEETLQRVGLYIETIIDSLPEDLQ 547
Query: 637 QLL 639
+L
Sbjct: 548 AVL 550
Score = 66 (28.3 bits), Expect = 3.7e-55, Sum P(3) = 3.7e-55
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 25 WVVAFCT--IRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCI 81
W + C+ + +L L++ YP LT+ E+ + Y SFPDS S + D
Sbjct: 5 WALVACSSVLTPELRISSLLQLVYPYDFRLTEKEKTSICYLSFPDSYS-----GGLGDTQ 59
Query: 82 FFFRFQR 88
F FR ++
Sbjct: 60 FSFRLRQ 66
>DICTYBASE|DDB_G0280481 [details] [associations]
symbol:DDB_G0280481 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0280481 GenomeReviews:CM000152_GR EMBL:AAFI02000036
InterPro:IPR012860 Pfam:PF07792 eggNOG:NOG275729 InterPro:IPR024224
PANTHER:PTHR13677 RefSeq:XP_641200.1 EnsemblProtists:DDB0232144
GeneID:8622581 KEGG:ddi:DDB_G0280481 OMA:WIQCICV
ProtClustDB:CLSZ2430617 Uniprot:Q54VA9
Length = 715
Score = 194 (73.4 bits), Expect = 3.3e-49, Sum P(5) = 3.3e-49
Identities = 65/210 (30%), Positives = 92/210 (43%)
Query: 420 LMTEH----KEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELT 475
L+T H KE I S Y PD S+L ++ E + + NE+LR HFL+LT
Sbjct: 469 LLTRHVLDNKEKILSEYKPFISPDKSVLKKI--------TESADDDIINEVLRTHFLQLT 520
Query: 476 TNFLAPFGPYFRTTTP-SEGSSPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWL 534
FL P YF P ++ S F PP L PF E L+ + +F+ +S +
Sbjct: 521 QKFLIPLERYFSLLLPLAKTISIFQRPPRLKPFIKEECLNKIMETDE-RFIIDN-KSKEI 578
Query: 535 DLYRRFLKGPNFMPWFXXXXXXXXXXXHRLWRQARMRTDIQQLIAKMSELESVDTFNAVE 594
+LY++FL NF W + L+R+A + DI L+ + D VE
Sbjct: 579 ELYKQFLDCVNFKQWLDDKRAQAIKHLNILYRKAILDADIHTLLRGKPISTATDLLKRVE 638
Query: 595 RHLIQEIQLQQSGCAATDSAEICQKLKGDL 624
LI E L Q+ S EI K K +
Sbjct: 639 DQLILEENLFQT------SKEIKDKFKSHI 662
Score = 164 (62.8 bits), Expect = 3.3e-49, Sum P(5) = 3.3e-49
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 232 GMLSEESAASVAPFLPYNQSIPQGLFHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAP 291
G + + V+P + + L D++G F+ +G P+LVI+P
Sbjct: 288 GNIPTSNTTGVSPSIWSEMKLVSNL-KSIDIYGCFKSFTTKLWMLWELVLLGHPLLVISP 346
Query: 292 TPPQCCEAVASLVSLIAPLLCSIDFRPYFTIHDPQF 327
PP C ++V +LVSLI+PL D+RPYFTIHD F
Sbjct: 347 NPPMCSDSVLALVSLISPLHYCGDYRPYFTIHDTDF 382
Score = 162 (62.1 bits), Expect = 3.3e-49, Sum P(5) = 3.3e-49
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YVF RQ D + RG QKS+V+LS F +F+ +++I+GPLYFD G +E +
Sbjct: 167 YVFFRQEKDSSISRGYLQKSVVLLSDESFVGLFKKVMEIVGPLYFDHGNTLLEVAYQNIM 226
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLP 228
WP G+ ELPI +L ++P P
Sbjct: 227 NWPELKLGQTYELPILGYILTFHVPHTRGTP 257
Score = 118 (46.6 bits), Expect = 3.3e-49, Sum P(5) = 3.3e-49
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 5 PSFSVKSELSLKPDPERM------QRWVVAFCTIRFDLEQGQLIEDCYPPGCLTQDEELE 58
P+ S S+ + DP + ++W+ +FC I FDLE GQ+++ +P ++E
Sbjct: 68 PNISTTSDNNSLLDPSNLTLNGKKKKWINSFCIINFDLEIGQVLDYSFPQVNFKEEESTN 127
Query: 59 VAYSSFPDSVSQHQNRSSIHDCIFFFRFQRHKNLPQG 95
+ + SFPDS S Q D I+ F+ + +L G
Sbjct: 128 LCFLSFPDSNSHLQG-----DIIYSFKLKETSSLGNG 159
Score = 89 (36.4 bits), Expect = 3.3e-49, Sum P(5) = 3.3e-49
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 331 NSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGS 366
N+ + PP +LGVTN FFLKAL P+I+++G+
Sbjct: 411 NNNNNNNGIPPSILGVTNPFFLKALGNWPNILTIGT 446
Score = 44 (20.5 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 7/33 (21%), Positives = 21/33 (63%)
Query: 454 RVEESM-SVVNNEILRRHFLELTTNFLAPFGPY 485
+++ S+ ++++ ++L RH L+ L+ + P+
Sbjct: 456 KIKSSLPNIMSKDLLTRHVLDNKEKILSEYKPF 488
Score = 43 (20.2 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 333 LQEGDTFPPMVLGVTNLFFLKALRKIPHIV 362
L+ G T+ +LG F + R PHI+
Sbjct: 231 LKLGQTYELPILGYILTFHVPHTRGTPHII 260
>WB|WBGene00018777 [details] [associations]
symbol:F53H1.3 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
GO:GO:0008340 InterPro:IPR012860 Pfam:PF07792 eggNOG:NOG275729
HOGENOM:HOG000000674 InterPro:IPR024224 PANTHER:PTHR13677
OMA:ISPLKYC GeneTree:ENSGT00390000005529 EMBL:FO081458 PIR:F88637
RefSeq:NP_500065.2 PaxDb:O45074 EnsemblMetazoa:F53H1.3.1
EnsemblMetazoa:F53H1.3.2 GeneID:176945 KEGG:cel:CELE_F53H1.3
UCSC:F53H1.3 CTD:176945 WormBase:F53H1.3 InParanoid:O45074
NextBio:894690 Uniprot:O45074
Length = 554
Score = 300 (110.7 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 94/288 (32%), Positives = 134/288 (46%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
+V RQ D + RG QKS+V++S P S+F + + +F+ G+ AIE ++
Sbjct: 103 FVHFRQCKDPTIHRGYYQKSIVLMSVLPLFSLFYSVTARIAEHFFESGEAAIEAACHHID 162
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGM-----LSEE-SAASVAPFLPYNQS 251
W P G+ +ELP+ ++ LP A LP E + LS++ S V P + S
Sbjct: 163 TWQQPHAGRTIELPLLGTLISCRLPAACDLPYEFRLDGHVELSDDDSQRLVRP--DFTTS 220
Query: 252 IPQGLFHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPLL 311
I Q + H L+ +GEP+L++APTP V S+V L++PL
Sbjct: 221 IVQHVHHLPLLW--------------ELVLLGEPLLIVAPTPSITSALVQSIVGLLSPLR 266
Query: 312 CSIDFRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSV---GSPA 368
DFRPYFTIHD +F +S P ++LGVTN FF+KAL PHI+ V G+
Sbjct: 267 IVNDFRPYFTIHDSEFREYSSKSRSP--PRVILGVTNPFFIKALDHWPHILKVAEQGAEI 324
Query: 369 PNSNRVAFASRASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREG 416
+ SS + P G Q SL KL R G
Sbjct: 325 GGDDMKKPKKTWSSSRTLDTPAGLYTQYKPFLSKDKSLAK--KLLRSG 370
Score = 193 (73.0 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 428 IWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFR 487
+++ Y D S+ +L+ +G S+ V +N IL+RHFLELT +F+ P Y
Sbjct: 348 LYTQYKPFLSKDKSLAKKLLRSG------NSLEVQHN-ILQRHFLELTHSFMIPMERYLS 400
Query: 488 TTTP-SEGSSPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNF 546
+ P + SPF P+ PF+ ++FL++L+ G G L+ + +W LYRRF+ NF
Sbjct: 401 SLMPLKKEMSPFKGIPSTRPFSMDDFLATLETNG-GPSLTCGTKGDWQGLYRRFITCSNF 459
Query: 547 MPWFXXXXXXXXXXXHRLWRQARMRTDI-QQLIAKMSELESVDTFNAVERHLIQEIQLQQ 605
W + +A D Q +A +E VD + +I+
Sbjct: 460 GGWLSMRSRDVNAQLKTHYVEALCSADFCSQTLATKHNVEIVDLVLRIRERIIE------ 513
Query: 606 SGCAATDSAEICQKLKGDLLAVFNVLPKDVQQLLLFN 642
C EI + L ++ + + + D++QLL+ N
Sbjct: 514 --CPP--DTEIRRNLVRQVVKILSNVDDDLKQLLMSN 546
Score = 124 (48.7 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 15 LKPDPE---RMQRWVVAFCTIRFDLEQGQLIEDCYP-PGCLTQDEELEVAYSSFPDSVSQ 70
++PD E R + W+ C + FDLE GQ +E YP L+ E++ + Y +FPDS
Sbjct: 1 MEPDIEPWDRFRDWLHCICVVTFDLELGQALEVIYPGDAILSNTEKINICYLAFPDS--- 57
Query: 71 HQNRSSIHDCIFFFRFQR 88
N S+ D F FR +R
Sbjct: 58 --NSSNARDTNFHFRIRR 73
>ZFIN|ZDB-GENE-041010-63 [details] [associations]
symbol:dennd6aa "DENN/MADD domain containing 6Aa"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-041010-63 InterPro:IPR012860 Pfam:PF07792
eggNOG:NOG275729 HOGENOM:HOG000000674 OrthoDB:EOG4N30NQ
InterPro:IPR024224 PANTHER:PTHR13677 EMBL:BC083420 IPI:IPI00502190
RefSeq:NP_001005987.1 UniGene:Dr.87880 GeneID:449814
KEGG:dre:449814 CTD:449814 NextBio:20832886 Uniprot:Q5XJ84
Length = 378
Score = 380 (138.8 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 86/230 (37%), Positives = 130/230 (56%)
Query: 138 YVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVS 197
YV+ RQ D+ LKRG QKSLV++S P+ + F LL+++ P YF+ + +E + +
Sbjct: 146 YVYFRQVRDKSLKRGYFQKSLVLISKLPYVTFFHSLLKLIAPEYFEEQEPCLEAACNDID 205
Query: 198 IWPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGML-SEESAASVAPFLPYNQSIPQGL 256
WP+P PGK++ LPI ++K+ +P + P S ++ S S + V+ LP
Sbjct: 206 RWPTPCPGKILSLPIMGVVMKLRIPTCYDKPGTSQLVQSTPSDSQVSIILP--------T 257
Query: 257 FHDSDLFGTFRGXXXXXXXXXXXXXIGEPILVIAPTPPQCCEAVASLVSLIAPL-LCSID 315
H+ DLF F +GE ++V+AP+P + + V +LVS I+PL CS D
Sbjct: 258 VHEVDLFRCFHPVFFHIQMLWELVLLGEALVVMAPSPAESSDTVLALVSCISPLRYCS-D 316
Query: 316 FRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVG 365
FRPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G
Sbjct: 317 FRPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIG 364
Score = 120 (47.3 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 20 ERMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIH 78
+R W+ C + FDLE GQ +E YP LT+ E+ + Y SFPDS N +
Sbjct: 49 DRFSSWLHCICVVGFDLELGQAVEVIYPHHSKLTEKEKTSICYLSFPDS-----NSGCLG 103
Query: 79 DCIFFFRFQR 88
D F FRF++
Sbjct: 104 DTQFCFRFRQ 113
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 663 619 0.00089 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 616 (65 KB)
Total size of DFA: 331 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.55u 0.18s 49.73t Elapsed: 00:00:02
Total cpu time: 49.56u 0.18s 49.74t Elapsed: 00:00:02
Start: Sat May 11 06:32:01 2013 End: Sat May 11 06:32:03 2013