Query 006041
Match_columns 663
No_of_seqs 256 out of 1118
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 14:23:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006041.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006041hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t17_A Conserved hypothetical 99.8 4.4E-20 1.5E-24 169.6 17.2 139 276-422 3-147 (148)
2 3tfz_A Cyclase; helix-GRIP, BE 99.8 1.5E-19 5.2E-24 171.5 20.5 144 276-423 6-163 (172)
3 3tl1_A WHIE ORF VI, polyketide 99.8 1.6E-19 5.5E-24 171.6 19.0 143 276-423 4-150 (159)
4 3tvq_A Multifunctional cyclase 99.8 6.8E-19 2.3E-23 168.9 18.2 143 276-423 4-150 (169)
5 2d4r_A Hypothetical protein TT 99.8 9.6E-18 3.3E-22 148.2 19.0 137 276-420 3-145 (147)
6 3ggn_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 140.9 17.8 140 275-420 4-147 (155)
7 3qsz_A STAR-related lipid tran 99.7 5E-15 1.7E-19 141.6 19.7 166 239-421 3-181 (189)
8 3p9v_A Uncharacterized protein 99.6 4.7E-14 1.6E-18 132.8 17.7 140 274-423 6-155 (161)
9 2le1_A Uncharacterized protein 99.6 3.9E-14 1.3E-18 130.3 15.1 138 276-422 3-146 (151)
10 2pcs_A Conserved protein; stru 99.6 1.5E-13 5.1E-18 127.1 18.8 145 275-423 3-152 (162)
11 3f08_A Uncharacterized protein 99.5 1.7E-13 5.7E-18 127.9 17.7 135 276-421 3-140 (146)
12 2ns9_A Hypothetical protein AP 99.5 1.3E-12 4.5E-17 119.1 19.4 138 274-419 12-156 (157)
13 3ijt_A SMU.440, putative uncha 99.5 5.7E-13 2E-17 125.8 17.0 138 270-419 13-154 (155)
14 1ln1_A PC-TP, phosphatidylchol 99.4 6E-12 2.1E-16 122.0 20.5 168 239-421 28-211 (214)
15 3p51_A Uncharacterized protein 99.4 9E-12 3.1E-16 118.4 18.1 131 276-423 3-146 (160)
16 3p0l_A Steroidogenic acute reg 99.3 1.5E-10 5E-15 113.9 18.1 162 239-418 31-213 (221)
17 2e3n_A Lipid-transfer protein 99.2 1.8E-10 6.3E-15 115.5 16.4 175 238-426 46-253 (255)
18 2qim_A PR10.2B; trans-zeatin, 99.2 9.2E-10 3.1E-14 104.1 19.3 143 274-420 3-154 (158)
19 1tw0_A Pathogenesis-related cl 99.2 2E-09 7E-14 101.7 21.6 141 276-420 4-153 (157)
20 1e09_A PRU AV 1; allergen, maj 99.2 6.4E-10 2.2E-14 105.3 17.4 142 275-420 3-154 (159)
21 1jss_A Stard4, cholesterol-reg 99.2 9.5E-10 3.3E-14 108.6 17.7 166 238-419 42-223 (224)
22 3rt2_A Abscisic acid receptor 99.1 4E-09 1.4E-13 103.1 20.7 143 275-423 27-177 (183)
23 1icx_A Protein LLR18A, LLPR10. 99.1 1.7E-09 5.8E-14 102.0 17.0 140 276-420 4-152 (155)
24 2r55_A STAR-related lipid tran 99.1 8.1E-09 2.8E-13 101.8 21.6 166 239-421 43-230 (231)
25 1em2_A MLN64 protein; beta bar 99.1 3E-09 1E-13 104.9 18.0 165 239-421 42-227 (229)
26 3oqu_A Abscisic acid receptor 99.0 4.7E-09 1.6E-13 104.3 17.3 148 270-423 45-201 (205)
27 2i9y_A Major latex protein-lik 99.0 2.9E-09 1E-13 101.7 14.7 143 269-418 11-163 (166)
28 3fo5_A Thioesterase, adipose a 99.0 7.9E-09 2.7E-13 105.7 16.2 165 238-423 65-250 (258)
29 2pso_A STAR-related lipid tran 99.0 6.3E-09 2.2E-13 104.4 14.6 167 237-423 48-231 (237)
30 3kl1_A PYL2, putative uncharac 98.9 6.6E-08 2.3E-12 94.9 20.1 142 276-422 36-186 (190)
31 3rws_A MTN13 protein; zeatin, 98.9 5.6E-08 1.9E-12 93.6 18.8 143 272-420 6-160 (168)
32 2flh_A Cytokinin-specific bind 98.9 1.8E-08 6.3E-13 95.2 14.9 137 275-418 3-151 (155)
33 3jrs_A PYL1, putative uncharac 98.9 5.3E-08 1.8E-12 97.0 18.3 141 276-421 55-206 (208)
34 4a8u_A Major pollen allergen B 98.9 6.6E-08 2.3E-12 92.0 18.0 140 276-419 4-153 (159)
35 2qpv_A Uncharacterized protein 98.9 2E-08 6.8E-13 95.4 14.1 126 276-419 28-155 (156)
36 2vjg_A Major allergen DAU C 1; 98.9 5.7E-08 1.9E-12 92.1 16.8 138 275-417 4-151 (154)
37 3k3k_A Abscisic acid receptor 98.9 4.3E-08 1.5E-12 97.8 15.8 142 276-424 51-202 (211)
38 1xuv_A Hypothetical protein MM 98.8 2.4E-07 8.3E-12 87.7 17.6 141 275-422 22-170 (178)
39 2il5_A Hypothetical protein; s 98.8 7E-07 2.4E-11 83.2 19.8 144 273-420 12-168 (171)
40 2leq_A Uncharacterized protein 98.7 5.6E-07 1.9E-11 80.2 18.1 132 275-420 5-143 (146)
41 2vq5_A S-norcoclaurine synthas 98.7 5.8E-08 2E-12 96.2 12.6 151 264-421 17-180 (201)
42 3ie5_A Phenolic oxidative coup 98.7 2.1E-07 7.2E-12 89.3 14.0 143 272-419 7-159 (165)
43 3qrz_A Abscisic acid receptor 98.7 5.1E-10 1.8E-14 112.5 -4.6 139 276-419 79-222 (223)
44 3oji_A Abscisic acid receptor 98.7 9.5E-07 3.3E-11 86.9 18.5 141 274-419 29-186 (189)
45 2d4r_A Hypothetical protein TT 98.7 6.6E-08 2.3E-12 84.9 9.3 80 95-174 3-145 (147)
46 2lcg_A Uncharacterized protein 98.7 5.6E-07 1.9E-11 81.8 15.6 131 275-422 1-136 (142)
47 1z94_A Conserved hypothetical 98.7 3.5E-07 1.2E-11 82.0 14.0 132 276-419 4-143 (147)
48 2lgh_A Uncharacterized protein 98.6 9.6E-07 3.3E-11 81.0 16.4 130 275-420 1-135 (144)
49 2ldk_A Uncharacterized protein 98.6 1.9E-06 6.4E-11 80.7 18.0 141 274-422 11-163 (172)
50 3q6a_A Uncharacterized protein 98.6 6.8E-07 2.3E-11 80.5 13.9 127 275-421 1-127 (135)
51 1t17_A Conserved hypothetical 98.6 1.2E-07 4.1E-12 86.6 8.6 82 95-176 3-147 (148)
52 1xfs_A NC_840354, conserved hy 98.6 1.2E-06 4.1E-11 82.7 15.5 139 275-421 10-168 (178)
53 2lf2_A Uncharacterized protein 98.6 2.6E-06 8.8E-11 80.6 17.4 140 274-422 15-167 (175)
54 2l8o_A Uncharacterized protein 98.5 1.9E-06 6.4E-11 79.0 15.1 130 276-421 3-137 (144)
55 1xn6_A Hypothetical protein BC 98.5 4E-07 1.4E-11 82.5 10.2 129 276-419 9-143 (143)
56 3pu2_A Uncharacterized protein 98.5 5.4E-06 1.8E-10 77.8 17.5 139 274-420 12-157 (164)
57 2l9p_A Uncharacterized protein 98.5 1.6E-06 5.6E-11 80.8 13.4 137 275-421 8-157 (164)
58 2lak_A AHSA1-like protein RHE_ 98.4 6.7E-07 2.3E-11 82.8 10.1 131 274-422 8-143 (160)
59 3rd6_A MLL3558 protein; struct 98.4 8.2E-06 2.8E-10 76.1 16.8 140 271-420 4-152 (161)
60 3put_A Hypothetical conserved 98.4 1.2E-05 3.9E-10 75.8 17.9 139 273-421 7-154 (166)
61 3tfz_A Cyclase; helix-GRIP, BE 98.4 1.2E-06 4E-11 82.8 10.7 81 94-174 5-160 (172)
62 3q64_A MLL3774 protein; struct 98.4 1.4E-05 4.7E-10 74.6 17.2 140 273-422 7-155 (162)
63 2nn5_A Hypothetical protein EF 98.3 8.6E-06 2.9E-10 78.6 15.0 125 274-420 35-159 (184)
64 3ijt_A SMU.440, putative uncha 98.3 1.7E-06 5.9E-11 81.4 9.9 81 93-173 17-154 (155)
65 3tvq_A Multifunctional cyclase 98.3 3.3E-06 1.1E-10 80.7 11.3 81 94-174 3-147 (169)
66 2wql_A Major allergen DAU C 1; 98.3 1.2E-05 4.2E-10 76.2 15.0 138 276-417 5-151 (154)
67 3eli_A AHSA1, AHA1 domain prot 98.2 1.1E-05 3.6E-10 74.3 12.6 132 276-419 3-145 (152)
68 3q63_A MLL2253 protein; struct 98.2 2.3E-05 7.7E-10 72.5 14.3 130 274-420 8-142 (151)
69 2k5g_A Uncharacterized protein 98.2 9.3E-06 3.2E-10 78.4 12.1 131 276-421 20-164 (191)
70 3uid_A Putative uncharacterize 98.2 3.5E-05 1.2E-09 72.8 15.6 138 275-420 13-162 (168)
71 3tl1_A WHIE ORF VI, polyketide 98.2 8.6E-06 2.9E-10 77.1 11.2 80 95-174 4-147 (159)
72 2le1_A Uncharacterized protein 98.2 1.8E-06 6.2E-11 79.0 5.8 79 95-174 3-144 (151)
73 2pcs_A Conserved protein; stru 98.1 8.2E-06 2.8E-10 75.0 10.0 80 95-174 4-149 (162)
74 3qsz_A STAR-related lipid tran 98.1 1.3E-05 4.3E-10 76.3 11.0 96 79-174 11-180 (189)
75 1xn5_A BH1534 unknown conserve 98.1 1.6E-05 5.6E-10 72.6 11.1 128 276-420 6-140 (146)
76 1vjh_A BET V I allergen family 98.1 7.5E-05 2.6E-09 67.9 15.3 109 275-419 5-119 (122)
77 3f08_A Uncharacterized protein 97.9 3.1E-05 1.1E-09 71.9 9.4 79 95-174 3-139 (146)
78 2kew_A Uncharacterized protein 97.9 6.7E-06 2.3E-10 75.8 4.3 130 275-420 10-145 (152)
79 2ns9_A Hypothetical protein AP 97.9 4.9E-05 1.7E-09 68.9 9.2 79 94-172 13-155 (157)
80 4fpw_A CALU16; structural geno 97.8 0.0001 3.4E-09 71.3 11.7 125 272-420 18-142 (181)
81 1x53_A Activator of 90 kDa hea 97.8 5.4E-05 1.8E-09 69.0 8.5 124 275-420 11-138 (145)
82 3ggn_A Uncharacterized protein 97.8 8.6E-05 3E-09 68.7 9.4 82 93-174 3-147 (155)
83 2qpv_A Uncharacterized protein 97.8 6.4E-05 2.2E-09 71.2 8.5 74 96-172 29-154 (156)
84 3p9v_A Uncharacterized protein 97.7 0.00013 4.4E-09 68.3 9.6 85 95-179 8-157 (161)
85 2luz_A CALU16; structural geno 97.7 0.00098 3.4E-08 65.2 16.0 129 271-423 28-156 (192)
86 1zxf_A CALC; SELF-sacrificing 97.6 0.00042 1.4E-08 64.4 12.0 135 276-423 5-154 (155)
87 3oh8_A Nucleoside-diphosphate 97.6 0.00018 6.3E-09 78.7 10.9 105 276-387 2-113 (516)
88 3ni8_A PFC0360W protein; heat 97.6 0.00023 7.7E-09 67.0 9.2 132 274-418 18-153 (158)
89 3p51_A Uncharacterized protein 97.5 0.00032 1.1E-08 66.4 8.7 88 95-187 3-156 (160)
90 1ln1_A PC-TP, phosphatidylchol 97.4 0.001 3.5E-08 64.1 12.2 95 79-173 36-209 (214)
91 3p0l_A Steroidogenic acute reg 97.3 0.0016 5.5E-08 63.6 11.4 94 79-172 40-213 (221)
92 2leq_A Uncharacterized protein 96.5 0.011 3.9E-07 52.1 9.7 31 93-123 4-34 (146)
93 2r55_A STAR-related lipid tran 96.5 0.026 8.9E-07 55.2 13.1 96 79-174 51-229 (231)
94 1em2_A MLN64 protein; beta bar 96.5 0.019 6.4E-07 56.3 12.0 95 80-174 52-226 (229)
95 3rt2_A Abscisic acid receptor 96.5 0.02 6.9E-07 55.7 11.8 80 96-175 29-175 (183)
96 2lak_A AHSA1-like protein RHE_ 96.3 0.013 4.5E-07 53.8 9.1 35 92-126 7-41 (160)
97 1jss_A Stard4, cholesterol-reg 96.3 0.016 5.3E-07 56.9 9.9 95 79-173 51-223 (224)
98 3oqu_A Abscisic acid receptor 96.3 0.029 9.9E-07 55.7 11.8 83 92-174 48-198 (205)
99 2e3n_A Lipid-transfer protein 96.2 0.042 1.4E-06 54.7 12.5 98 79-176 55-249 (255)
100 1xn6_A Hypothetical protein BC 95.9 0.026 9E-07 50.6 8.6 79 93-172 7-142 (143)
101 3q6a_A Uncharacterized protein 95.4 0.076 2.6E-06 47.3 9.6 76 95-173 2-125 (135)
102 1xuv_A Hypothetical protein MM 95.2 0.12 4E-06 48.5 10.5 33 92-124 20-52 (178)
103 3jrs_A PYL1, putative uncharac 95.1 0.11 3.8E-06 51.6 10.6 33 96-128 56-88 (208)
104 3kl1_A PYL2, putative uncharac 94.9 0.18 6.2E-06 49.3 11.3 82 93-174 32-184 (190)
105 2lio_A Uncharacterized protein 94.1 0.87 3E-05 42.2 13.4 122 276-419 5-128 (136)
106 2il5_A Hypothetical protein; s 93.8 0.39 1.3E-05 44.2 10.4 32 93-124 13-44 (171)
107 3qrz_A Abscisic acid receptor 93.4 0.044 1.5E-06 55.0 3.7 80 94-173 76-222 (223)
108 2pso_A STAR-related lipid tran 92.9 0.23 8E-06 49.4 7.9 92 79-174 58-228 (237)
109 1e09_A PRU AV 1; allergen, maj 92.8 0.75 2.6E-05 43.0 10.9 34 93-126 2-37 (159)
110 2nn5_A Hypothetical protein EF 92.7 0.18 6.3E-06 48.2 6.7 42 86-128 29-70 (184)
111 1xn5_A BH1534 unknown conserve 92.6 0.078 2.7E-06 48.0 3.8 34 93-126 4-37 (146)
112 2kew_A Uncharacterized protein 92.1 0.093 3.2E-06 47.9 3.5 34 92-125 8-41 (152)
113 3k3k_A Abscisic acid receptor 92.0 0.39 1.3E-05 47.9 8.1 33 96-128 52-84 (211)
114 1icx_A Protein LLR18A, LLPR10. 91.8 0.58 2E-05 43.5 8.8 35 94-128 3-39 (155)
115 3q63_A MLL2253 protein; struct 91.8 0.11 3.7E-06 47.6 3.7 34 92-125 7-40 (151)
116 2l8o_A Uncharacterized protein 91.4 0.12 4E-06 46.9 3.4 31 94-124 2-33 (144)
117 3pu2_A Uncharacterized protein 91.1 0.2 6.7E-06 46.6 4.7 35 90-124 9-43 (164)
118 3fo5_A Thioesterase, adipose a 90.7 0.64 2.2E-05 47.3 8.5 93 79-173 74-246 (258)
119 1z94_A Conserved hypothetical 90.5 0.16 5.5E-06 44.8 3.4 32 94-125 3-34 (147)
120 2ffs_A Hypothetical protein PA 90.5 12 0.00042 35.6 18.5 125 286-419 21-151 (157)
121 2lgh_A Uncharacterized protein 90.0 0.21 7.3E-06 45.2 3.8 30 95-124 2-32 (144)
122 2lcg_A Uncharacterized protein 90.0 0.2 6.8E-06 44.9 3.5 30 95-124 2-32 (142)
123 2lf2_A Uncharacterized protein 89.8 0.23 7.8E-06 46.5 4.0 33 92-124 14-46 (175)
124 1xfs_A NC_840354, conserved hy 89.6 0.25 8.6E-06 46.0 4.0 34 92-125 8-41 (178)
125 2flh_A Cytokinin-specific bind 89.2 0.54 1.8E-05 44.0 6.0 34 95-128 4-39 (155)
126 2ldk_A Uncharacterized protein 88.9 0.3 1E-05 45.1 4.0 33 92-124 10-42 (172)
127 1x53_A Activator of 90 kDa hea 88.3 0.34 1.2E-05 43.6 3.9 34 94-127 11-44 (145)
128 2l9p_A Uncharacterized protein 88.2 0.25 8.5E-06 45.6 2.9 32 93-124 7-38 (164)
129 1tw0_A Pathogenesis-related cl 87.7 1 3.5E-05 42.0 6.8 36 93-128 2-39 (157)
130 3ni8_A PFC0360W protein; heat 87.1 0.39 1.3E-05 44.8 3.6 35 90-124 15-49 (158)
131 2k5g_A Uncharacterized protein 87.0 0.38 1.3E-05 46.0 3.5 32 94-125 19-50 (191)
132 3q64_A MLL3774 protein; struct 86.4 0.49 1.7E-05 43.6 3.8 33 93-125 8-40 (162)
133 3eli_A AHSA1, AHA1 domain prot 86.3 0.43 1.5E-05 43.3 3.3 30 95-124 3-32 (152)
134 3rd6_A MLL3558 protein; struct 86.2 0.49 1.7E-05 43.6 3.7 32 94-125 8-39 (161)
135 2qim_A PR10.2B; trans-zeatin, 86.0 1.1 3.8E-05 41.8 6.0 35 94-128 4-40 (158)
136 2luz_A CALU16; structural geno 83.6 2.2 7.4E-05 41.5 7.1 33 94-126 32-64 (192)
137 3put_A Hypothetical conserved 82.7 0.77 2.6E-05 42.7 3.4 32 93-124 8-39 (166)
138 3uid_A Putative uncharacterize 82.1 0.92 3.1E-05 42.4 3.7 34 91-124 10-43 (168)
139 2vjg_A Major allergen DAU C 1; 81.6 1 3.6E-05 42.2 3.8 35 94-128 4-40 (154)
140 4fpw_A CALU16; structural geno 81.4 1.4 4.7E-05 42.3 4.7 35 92-126 19-53 (181)
141 3rws_A MTN13 protein; zeatin, 81.3 2.1 7.3E-05 40.8 5.9 36 93-128 8-45 (168)
142 3ie5_A Phenolic oxidative coup 80.7 2.3 7.9E-05 40.4 6.0 37 92-128 8-46 (165)
143 2lm1_A Lysine-specific demethy 79.2 3.1 0.00011 36.6 5.8 48 480-531 13-63 (107)
144 4a8u_A Major pollen allergen B 76.5 2.9 9.8E-05 39.3 5.1 34 95-128 4-39 (159)
145 3oji_A Abscisic acid receptor 75.1 2.2 7.5E-05 41.9 4.0 33 96-128 32-64 (189)
146 2i9y_A Major latex protein-lik 74.8 1.3 4.4E-05 41.8 2.3 34 95-128 18-53 (166)
147 1zxf_A CALC; SELF-sacrificing 73.2 1.8 6E-05 39.8 2.7 28 94-123 4-31 (155)
148 2vq5_A S-norcoclaurine synthas 66.2 4.1 0.00014 40.1 3.8 34 95-128 30-66 (201)
149 2jxj_A Histone demethylase jar 64.7 5.9 0.0002 34.1 4.0 49 480-532 5-56 (96)
150 2jrz_A Histone demethylase jar 58.4 9.5 0.00032 34.2 4.4 49 480-532 9-60 (117)
151 2lio_A Uncharacterized protein 58.0 5.6 0.00019 36.7 2.9 32 94-125 4-36 (136)
152 2eqy_A RBP2 like, jumonji, at 57.6 15 0.0005 33.3 5.5 49 480-532 11-62 (122)
153 2li6_A SWI/SNF chromatin-remod 56.1 9.8 0.00033 34.0 4.1 49 553-602 21-69 (116)
154 1kkx_A Transcription regulator 56.1 6.8 0.00023 35.7 3.0 54 480-537 16-82 (123)
155 1ig6_A MRF-2, modulator recogn 53.2 15 0.00052 32.1 4.8 52 482-537 3-67 (107)
156 2cxy_A BAF250B subunit, HBAF25 52.3 14 0.00047 33.5 4.4 49 553-602 23-71 (125)
157 1c20_A DEAD ringer protein; DN 52.2 12 0.0004 34.0 4.0 49 553-602 24-72 (128)
158 2esn_A Probable transcriptiona 50.3 3 0.0001 40.6 -0.4 28 511-538 11-38 (310)
159 2lm1_A Lysine-specific demethy 50.2 16 0.00054 32.0 4.3 47 554-602 18-64 (107)
160 2wql_A Major allergen DAU C 1; 49.8 20 0.00067 33.6 5.2 35 94-128 4-40 (154)
161 2cxy_A BAF250B subunit, HBAF25 49.1 11 0.00036 34.2 3.1 51 483-537 22-85 (125)
162 2ijl_A AGR_C_4647P, molybdenum 47.9 4.7 0.00016 37.2 0.6 39 514-559 28-66 (135)
163 2li6_A SWI/SNF chromatin-remod 46.7 15 0.00052 32.8 3.7 54 480-537 17-83 (116)
164 3mab_A Uncharacterized protein 45.1 11 0.00037 32.9 2.4 79 481-566 7-85 (93)
165 1c20_A DEAD ringer protein; DN 44.2 24 0.00081 32.0 4.7 53 481-537 21-86 (128)
166 3e7l_A Transcriptional regulat 44.1 16 0.00054 28.8 3.1 38 572-609 9-47 (63)
167 2jrz_A Histone demethylase jar 44.0 20 0.00067 32.1 4.0 47 553-601 13-59 (117)
168 1kkx_A Transcription regulator 42.7 15 0.00053 33.3 3.2 56 552-608 19-83 (123)
169 1eto_A FIS, factor for inversi 41.2 43 0.0015 29.1 5.7 33 576-608 52-85 (98)
170 1g2h_A Transcriptional regulat 41.0 13 0.00044 29.3 2.1 32 578-609 17-48 (61)
171 2yqf_A Ankyrin-1; death domain 39.1 14 0.00048 32.5 2.2 82 478-592 9-98 (111)
172 2kk0_A AT-rich interactive dom 38.8 19 0.00065 33.5 3.2 51 483-537 35-98 (145)
173 1eto_A FIS, factor for inversi 38.7 26 0.0009 30.5 3.9 56 482-537 26-84 (98)
174 2lnh_A N-WAsp, neural wiskott- 36.4 23 0.00078 29.0 2.9 44 551-600 19-63 (65)
175 1b9m_A Protein (mode); DNA-bin 36.0 11 0.00038 36.9 1.2 24 515-538 25-48 (265)
176 2gf5_A FADD protein; death dom 35.5 33 0.0011 33.0 4.4 62 526-594 111-180 (191)
177 1ig6_A MRF-2, modulator recogn 34.1 22 0.00076 31.1 2.7 48 554-602 6-53 (107)
178 2hin_A GP39, repressor protein 33.9 25 0.00084 29.0 2.8 23 587-609 3-25 (71)
179 2jxj_A Histone demethylase jar 33.7 26 0.00089 29.9 3.0 48 554-603 10-57 (96)
180 2kk0_A AT-rich interactive dom 33.6 34 0.0012 31.8 4.0 49 553-602 36-84 (145)
181 2rq5_A Protein jumonji; develo 29.5 33 0.0011 31.2 3.1 49 552-602 14-62 (121)
182 2eqy_A RBP2 like, jumonji, at 29.2 44 0.0015 30.1 3.9 53 554-608 16-77 (122)
183 3oh8_A Nucleoside-diphosphate 27.7 38 0.0013 36.7 3.8 34 95-128 2-35 (516)
184 1wmg_A Netrin receptor UNC5H2; 27.5 27 0.00092 30.6 2.1 62 524-595 31-97 (103)
185 2rq5_A Protein jumonji; develo 26.0 61 0.0021 29.4 4.2 49 484-537 15-76 (121)
186 3fzv_A Probable transcriptiona 25.2 27 0.00093 33.5 1.8 22 517-538 11-32 (306)
187 1uth_A LYSR-type regulatory pr 24.7 16 0.00053 36.0 0.0 46 513-565 17-64 (315)
188 2hin_A GP39, repressor protein 24.2 43 0.0015 27.6 2.6 23 516-538 2-24 (71)
189 1ngr_A P75 low affinity neurot 23.2 73 0.0025 26.9 3.9 56 524-592 21-83 (85)
190 3szp_A Transcriptional regulat 22.9 26 0.0009 33.0 1.2 39 517-569 8-46 (291)
191 3e7l_A Transcriptional regulat 22.4 40 0.0014 26.4 2.0 35 503-537 10-45 (63)
No 1
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=99.84 E-value=4.4e-20 Score=169.59 Aligned_cols=139 Identities=15% Similarity=0.241 Sum_probs=116.9
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecC----CEEEEEE-EeccceeEEEEEEEEEEEEeeeCCC-
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSREN----NKVRILQ-EGCKGLLYMVLHARVVMDICEQHEQ- 349 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g----n~vrv~q-~g~~gll~~~~~~rvVLDV~E~ppr- 349 (663)
.++.+++|+||+++||++++|+++||+|+|+|.+++++++.+ +...... .+..++ ...|++++++ .+++
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~v~~----~~~~~ 77 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFL-REKFATRVRR----DKDAR 77 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSS-CCEEEEEEEE----ETTTC
T ss_pred EEEEEEEecCCHHHHHHHHHHHhhHHhhCCCcCeeEEEEecCCCCCceEEEEEEEEecce-eEEEEEEEEE----cCCCc
Confidence 478999999999999999999999999999999999998644 3333332 344443 2456666543 4666
Q ss_pred eEEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 350 EISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 350 rIsfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
+|.|++++|+|+.+.|.|+|++.++| |+|+|+++++++ ++++..+++.++...+..++++|++|+++.++
T Consensus 78 ~i~~~~~~G~f~~~~g~w~f~~~~~g-t~v~~~~~~~~~--~~l~~~l~~~~~~~~~~~~~~~f~~r~~~~~~ 147 (148)
T 1t17_A 78 SIDVSLLYGPFKRLNNGWRFMPEGDA-TRVEFVIEFAFK--SALLDAMLAANVDRAAGKLIACFEARAQQLHG 147 (148)
T ss_dssp EEEEEESSTTSSCEEEEEEEEEETTE-EEEEEEEEECCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCCChhccEEEEEEEECCCC-eEEEEEEEEEEC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999876 999999999984 67888999999999999999999999998875
No 2
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=99.84 E-value=1.5e-19 Score=171.51 Aligned_cols=144 Identities=19% Similarity=0.261 Sum_probs=117.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEE-EeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQ-EGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q-~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
+++.+++|+||+++||++|+|+++||+|+|+|.+++++++.++..++.. .+..++. ..|+++++++ .++++|.|+
T Consensus 6 ~v~~si~I~ap~~~V~~~v~D~~~~p~~~P~~~~~~v~~~~~~~~~~~~~~~~~G~~-~~~~s~~~~~---~~~~~i~~~ 81 (172)
T 3tfz_A 6 HVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLHVDVAGEI-NTWTSRRDLD---PARRVIAYR 81 (172)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGHHHHCSSEEEEEEEEEETTEEEEEEEEEETTEE-EEEEEEEEEE---TTTTEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHHHhHHHHHhhCcccceEEEEecCCCEEEEEEEEecCCEE-EEEEEEEEEe---CCCCEEEEE
Confidence 6999999999999999999999999999999999999998877755433 3555542 5566654322 235789999
Q ss_pred EE--ecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCc-----------cchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 355 QV--EGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNS-----------LLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 355 ~V--eGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg-----------~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
++ +|+|+.+.|.|+|++.++++|+|+|++++++..+. +.+...+.+.+.+++..+|.+||+++|++.
T Consensus 82 ~~~~~gpf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~l~~~~~~~L~~lk~~aE~~~ 161 (172)
T 3tfz_A 82 QLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVERNSVADLNAVLGEAERRV 161 (172)
T ss_dssp EEECCTTEEEEEEEEEEEEEETTEEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCChhhcEEEEEEEECCCCcEEEEEEEEEEEcChhHHHhhccccCchhhHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99 58999999999999998779999999999975322 123346889999999999999999999876
Q ss_pred CC
Q 006041 422 GD 423 (663)
Q Consensus 422 a~ 423 (663)
..
T Consensus 162 ~~ 163 (172)
T 3tfz_A 162 RA 163 (172)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 3
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=99.83 E-value=1.6e-19 Score=171.55 Aligned_cols=143 Identities=22% Similarity=0.416 Sum_probs=119.4
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEE---EeccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQ---EGCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q---~g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
+++.+++|+||+++||++++|+++||+|+|+|.++++++++++..++.. ....+.. ..|+.+++++ .+.++|.
T Consensus 4 ~v~~si~I~a~~~~V~~lV~Dve~yP~~~p~~~~~~vl~~~~~~~~~rl~~~~~~~G~~-~~~ts~~~~d---~~~~~I~ 79 (159)
T 3tl1_A 4 HTDNEITIAAPMELVWNMTNDIEKWPGLFSEYASVEVLGRDDDKVTFRLTMHPDADGKV-WSWVSERVAD---PVTRTVR 79 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEEECSSEEEEEEEECCCTTSCC-CEEEEEEEEE---TTTTEEE
T ss_pred eeEEEEEecCCHHHHHHHHHhHHHhhhhhhCceEEEEEecCCCEEEEEEEEEeccCceE-EEEEEEEEEc---CCCCEEE
Confidence 4789999999999999999999999999999999999998877666543 3455543 4566654432 2456999
Q ss_pred EEEE-ecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 353 FEQV-EGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 353 fr~V-eGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
|+++ +|+|+.+.|.|+|+++++ +|+|+|.++|++..+.+++...+.+.+..++...|.+||+++|+..+.
T Consensus 80 ~~~~~~gPf~~l~g~W~f~p~~~-gt~V~~~~df~~~~~~p~~~~~~~~~~~~~~~~~L~~lK~~~E~~~~~ 150 (159)
T 3tl1_A 80 AQRVETGPFQYMNIVWEYAETAE-GTVMRWTQDFAMKPDAPVDDAWMTDNINRNSRTQMALIRDRIEQAAGE 150 (159)
T ss_dssp EEESSCTTEEEEEEEEEEEEETT-EEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCChhhccCEEEEEECCC-CEEEEEEEEEEecCCCCCCHHHHHHHHHhhHHHHHHHHHHHHhhhhhh
Confidence 9987 799999999999999987 699999999998655667766788899999999999999999987654
No 4
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=99.81 E-value=6.8e-19 Score=168.91 Aligned_cols=143 Identities=21% Similarity=0.358 Sum_probs=119.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEE---eccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQE---GCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~---g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
+++.++.|+||+++||++|+|+++||+|+|+|.++++++++++.+++... ...+.. ..|+.+.+++ .+.++|.
T Consensus 4 ~v~~si~I~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~~~~~~~~~l~~~~~~~G~~-~~~ts~~~~d---~~~~~I~ 79 (169)
T 3tvq_A 4 RTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFDFRLKTRPDANGRV-WEWVSHRVPD---KGSRTVR 79 (169)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEEETTEEEEEEEECCCTTSCC-CEEEEEEEEE---GGGTEEE
T ss_pred eEEEEEEecCCHHHHHHHHHhhhHHHHHHhheeEEEEEecCCCEEEEEEEEEecCCCeE-EEEEEEEEEc---CCCcEEE
Confidence 48899999999999999999999999999999999999998886655432 444532 4566654432 3457999
Q ss_pred EEEE-ecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 353 FEQV-EGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 353 fr~V-eGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
|+++ +|+|+.+.|.|+|++.++| |+|+|..+|++.++.+++..++.+.+..++...|.+||+++|+..+.
T Consensus 80 ~~~l~~gPf~~~~g~W~f~p~~~g-t~V~~~~df~~~~~~p~~~~~~~~av~~~~~~~L~~LK~~aE~~~~~ 150 (169)
T 3tvq_A 80 AHRVETGPFAYMNLHWTYRAVAGG-TEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRHRE 150 (169)
T ss_dssp EEESSCTTEEEEEEEEEEEEETTE-EEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCChhheeeEEEEEECCCC-EEEEEEEEEEecCCCcccHHHHHHHHHhhHHHHHHHHHHHHhhhhhh
Confidence 9874 6899999999999999887 99999999998655678888899999999999999999999987665
No 5
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=99.78 E-value=9.6e-18 Score=148.19 Aligned_cols=137 Identities=19% Similarity=0.266 Sum_probs=108.3
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEE-EEeccceeEEEEEEEEEEEEee-eCCCeEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRIL-QEGCKGLLYMVLHARVVMDICE-QHEQEISF 353 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~-q~g~~gll~~~~~~rvVLDV~E-~pprrIsf 353 (663)
.++.+++|+||+++||++|+|+++||+|+|+|.+++++...+++.... .....+. ...|..+ +.+ .++++|.|
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~g~~~~~~~~~~g~-~~~~~~~----~~~~~~~~~i~~ 77 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGK-KVRWLEE----EEWDDENLRNRF 77 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTEEEEEEEEEETTE-EEEEEEE----EEEETTTTEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHhChhhhhhhcccccEEEEEEeCCCccEEEEEEEeCCc-eEEEEEE----EEEcCCCcEEEE
Confidence 478899999999999999999999999999999999998765543322 2233332 2334443 333 46689999
Q ss_pred EEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchH----HHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 354 EQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSE----AIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 354 r~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~----~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
+..+|+++.+.|.|+|++.++| |+|+|++++++. ++++. .++...+++.+..+|++|++++|+.
T Consensus 78 ~~~~g~~~~~~~~~~~~~~~~g-T~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~~ 145 (147)
T 2d4r_A 78 FSPEGDFDRYEGTWVFLPEGEG-TRVVLTLTYELT--IPIFGGLLRKLVQKLMQENVESLLKGLEERVLAA 145 (147)
T ss_dssp EEEEESCSEEEEEEEEEECSSS-EEEEEEEEEECC--CTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeccCChhheEEEEEEEECCCC-cEEEEEEEEecC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999888999999999876 999999999975 33443 4455777799999999999999985
No 6
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=99.67 E-value=1.8e-15 Score=140.94 Aligned_cols=140 Identities=16% Similarity=0.219 Sum_probs=101.2
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
..++.+++|+||+++||++++|+++||+|+|+|.+++++.. +..+.......+...+.|..+++. ..++++|.|+
T Consensus 4 ~~v~~s~~I~ap~e~V~~~~~D~e~~p~w~p~~~~v~~~~~--~~~~~~~~~~~G~~~~~~~~~v~e---~~p~~~i~~~ 78 (155)
T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDD--KRSRWTVEAPAPLGTVSWEAELTA---DEPGKRIAWR 78 (155)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGGHHHHSTTCCEEEECSS--SEEEEEEECCTTTCEEEEEEEEEE---EETTTEEEEE
T ss_pred cEEEEEEEEcCCHHHHHHHHhCHHHhHHHhhhceEEEEecC--CeeEEEEEecCCcceEEEEEEEEE---ecCCCEEEEE
Confidence 45899999999999999999999999999999999999853 333332222223122456555432 2478999999
Q ss_pred EEecCCceeEEEEEEEEc-CCCeEEEEEEEEEEeccCcc---chHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 355 QVEGDFDSFQGKWLFEQL-GSHHTLLKYSVESKMQKNSL---LSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 355 ~VeGdFr~f~G~WtLepl-gdGgTrVtYtve~eP~~gg~---LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
.++|++..+.|.|+|++. ++++|+|+|.++++|+. ++ +...+++....+.+.+.|+.||+.+|..
T Consensus 79 ~~~g~~~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~-~~l~~~~~~~~~~~~~~~v~~~l~r~k~~~e~~ 147 (155)
T 3ggn_A 79 SLPGARIENSGEVLFRPAPGARGTEVVVRLTYRPPG-GSAGAVIARMFNQEPSQQLRDDLMRFKREQELG 147 (155)
T ss_dssp ECTTCSSCEEEEEEEEECSSSSCEEEEEEEEEC-----------------CHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCcceEEEEEEEECCCCCceEEEEEEEEECCC-cHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 999998889999999998 46689999999999852 22 2234456667888889999999999874
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.66 E-value=5e-15 Score=141.60 Aligned_cols=166 Identities=13% Similarity=0.198 Sum_probs=123.7
Q ss_pred CCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCC
Q 006041 239 SKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENN 318 (663)
Q Consensus 239 ~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn 318 (663)
.+|++.++.+|+ +||.+..+ +.+...++++.+|++|+++||+++.|++.||+|.|+|.++++++++++
T Consensus 3 ~~W~~~~~~~gv-------~v~~~~~~-----~~~~~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~~~~ 70 (189)
T 3qsz_A 3 DGWSLAKDAEGI-------KVYVRNVE-----GSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMPDVAASELLKATDT 70 (189)
T ss_dssp CCCEEEEEETTE-------EEEEECCT-----TCSSCEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEECSS
T ss_pred CCCEEEEcCCCE-------EEEEEeCC-----CCCeEEEEEEEEEECCHHHHHHHHHhHHHhhhHHHhcCEEEEEeecCC
Confidence 489999999999 99999433 223556999999999999999999999999999999999999998666
Q ss_pred EEEEEEEeccc--eeEEEEEEEEEEEEeeeCCCeEEEEEEec---------C--CceeEEEEEEEEcCCCeEEEEEEEEE
Q 006041 319 KVRILQEGCKG--LLYMVLHARVVMDICEQHEQEISFEQVEG---------D--FDSFQGKWLFEQLGSHHTLLKYSVES 385 (663)
Q Consensus 319 ~vrv~q~g~~g--ll~~~~~~rvVLDV~E~pprrIsfr~VeG---------d--Fr~f~G~WtLeplgdGgTrVtYtve~ 385 (663)
...+++..... +...-|...... ....+..+.+..... . +..+.|.|.|+| ++++|+|+|...+
T Consensus 71 ~~i~y~~~~~p~p~~~RD~v~~~~~--~~~~~g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~~~~ 147 (189)
T 3qsz_A 71 EQYHYLDNSAPWPVSNRDGVYHFTY--EKAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQMHA 147 (189)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEE--EECTTSCEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEEEEE
T ss_pred ceEEEEEeecCCCcCCcceEEEEEE--EECCCCeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEEEEe
Confidence 55555432111 111111111111 112234444433322 1 346789999999 8889999999999
Q ss_pred EeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 386 KMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 386 eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+|+ +++|.++++.++.+.+..+|++||+++++..
T Consensus 148 dp~--G~iP~~lvn~~~~~~~~~~l~~L~k~~~~~~ 181 (189)
T 3qsz_A 148 SPG--GSIPSWLANQTVVETPFGTLKALRSHLRQAH 181 (189)
T ss_dssp CSC--SSSCHHHHHHTTTHHHHHHHHHHHHHHTC--
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 995 7899999999999999999999999998754
No 8
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=99.58 E-value=4.7e-14 Score=132.78 Aligned_cols=140 Identities=15% Similarity=0.220 Sum_probs=104.5
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCc----ccccCcCCcEEEEEeecCCEEEEEE--Eecccee-EEEEEEEEEEEEeee
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYET----LPEIVPNLAISKILSRENNKVRILQ--EGCKGLL-YMVLHARVVMDICEQ 346 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEn----yPeWiP~V~sSrVLer~gn~vrv~q--~g~~gll-~~~~~~rvVLDV~E~ 346 (663)
...++.+++|+||+++||++|+|+++ ||+|+|+ ...+++..+... .+..+.. -..|++++++ .
T Consensus 6 ~i~v~~s~~I~ap~e~v~~lv~Dve~w~~~yp~~~p~------~~~~~~~~~~~~a~l~vg~~~~~~~~~s~~~~----~ 75 (161)
T 3p9v_A 6 SIELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKL------VDLGNNAYRWEMEKVGVDKHAIQSVYACTYHA----D 75 (161)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTCHHHHHTTSTTEEEE------EEEETTEEEEEECCBSSGGGCBCCEEEEEEEE----E
T ss_pred EEEEEEEEEEcCCHHHHHHHHhChhhhHhhCCCeEEE------EEcCCCceEEEEEEEeeeeEEEEEEEEEEEEE----c
Confidence 34688999999999999999999999 7777765 222334222221 1122111 1255665433 3
Q ss_pred C-CCeEEEEEEecCC-ceeEEEEEEEEcCCCeEEEEEEEEEEeccC-ccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 347 H-EQEISFEQVEGDF-DSFQGKWLFEQLGSHHTLLKYSVESKMQKN-SLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 347 p-prrIsfr~VeGdF-r~f~G~WtLeplgdGgTrVtYtve~eP~~g-g~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
+ +++|.|++++|+| +.+.|.|+|++.++|+|+|+|.++++++.+ ..+...++..++.+.+..+++++.+||++.|-+
T Consensus 76 ~~~~~I~~~~~~g~~~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~pl~~ll~~~~~~~~~~~~~~~v~af~~ra~~~~~~ 155 (161)
T 3p9v_A 76 KEAGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANLKKAFLE 155 (161)
T ss_dssp TTTTEEEEEECTTSTTEEEEEEEEEEESSSSCEEEEEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred CCCCEEEEEEecCccceeEEEEEEEEECCCCeEEEEEEEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 7899999999999 899999999999988899999999998511 224466789999999999999999999988765
No 9
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.57 E-value=3.9e-14 Score=130.32 Aligned_cols=138 Identities=11% Similarity=0.160 Sum_probs=103.3
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCC---EEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENN---KVRILQEGCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn---~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
+++.+++|+||+++||++|+|+++||+|+|.+.+++++...++ .++.. ....+. .+..+ +...+.+++++.
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~~~~~w~p~v~~~~~~~g~~~~~G~~r~~-~~~~G~---~~~e~--i~~~d~~~~~~~ 76 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFSAIHRWHPQVSAPTLRGASPHTPGAERVF-GAGTEE---ELVER--LVERDESARRLV 76 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSGGGGGTCTTCCCEEEESSCTTSTTCEEEE-SSSSSS---CEEEE--EEEEETTTTEEE
T ss_pred eEEEEEEecCCHHHHHHHHhCcCcHHHhcCCceEEEEECCCCCCCCeEEEE-EeCCCC---EEEEE--EEEEeCCCCEEE
Confidence 4889999999999999999999999999999999999875422 23322 122221 11222 112223468999
Q ss_pred EEEEecC--CceeEEEEEEEEcCCCeEEEEEEEEEEe-ccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 353 FEQVEGD--FDSFQGKWLFEQLGSHHTLLKYSVESKM-QKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 353 fr~VeGd--Fr~f~G~WtLeplgdGgTrVtYtve~eP-~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
|+.++|+ +..+.+.|+|++.++++|+|+|+.+|+| + .+++...+. +++..+...|++|++.+|++..
T Consensus 77 ~~~~~g~~~~~~~~~~~~l~~~~~~gt~v~w~~~f~~~p--~~~~~~~~~-~~~~~~~~~L~~Lk~~~e~~~~ 146 (151)
T 2le1_A 77 YTMPDPPFPITNHRAVLEVVPRDDRHCTVVWTAMFDCSP--ETARELESV-IGDGVFAVGLNALAERYGRLEH 146 (151)
T ss_dssp EEEEECSSSEEEEEEEEEEEESSSSCEEEEEEEEEEECH--HHHHHHHHH-TTTTHHHHHHHHHHHHTTTTSC
T ss_pred EEEecCCCCceeEEEEEEEEECCCCcEEEEEEEEEEecC--CCCCHHHHH-HHHHHHHHHHHHHHHHhhcccc
Confidence 9999975 5678999999997667899999999987 2 234455666 7888999999999999887643
No 10
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=99.56 E-value=1.5e-13 Score=127.14 Aligned_cols=145 Identities=13% Similarity=0.143 Sum_probs=102.4
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEE-eccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQE-GCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~-g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
++++.++.|+||+++||++|+|+++|++|+|.|.+++++. ++....... ...+ ....|..++++. ...+++++.|
T Consensus 3 m~i~~~~~i~ap~e~Vw~~l~D~e~~~~w~p~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~ 78 (162)
T 2pcs_A 3 LNGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIG--EDKYKADLQIGIAA-VKGKYDAIIEVT-DIKPPYHYKL 78 (162)
T ss_dssp CEEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEE--TTEEEEEEEECCGG-GCEEEEEEEEEE-EEETTTEEEE
T ss_pred EEEeeEEEecCCHHHHHHHhcCHHHHHhhCCCceEeEEeC--CCeEEEEEEEEeee-EEEEEEEEEEEE-ecCCCcEEEE
Confidence 4588999999999999999999999999999998888764 344333222 2222 223444443321 1246688877
Q ss_pred EEEe---cCCceeEEEEEEEEcCCCeEEEEEEEEEEeccC-ccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 354 EQVE---GDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKN-SLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 354 r~Ve---GdFr~f~G~WtLeplgdGgTrVtYtve~eP~~g-g~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
.... +.+..+.+.|+|++.++++|+|+|+.++++.+. ..++..++....++.+...+++|++++|+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~lk~~~e~~~~~ 152 (162)
T 2pcs_A 79 LVNGEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKSKQE 152 (162)
T ss_dssp EEEEEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEecCCCccEEEEEEEEEEecCCCcEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 6542 233467999999997667899999999887421 123566788888889999999999999986555
No 11
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.55 E-value=1.7e-13 Score=127.88 Aligned_cols=135 Identities=16% Similarity=0.300 Sum_probs=103.8
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFEQ 355 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr~ 355 (663)
.+..+++|+|||++||++|+|+++||+|+|.+.++++++. +.++.... ..+. .+..+ ++..+..++.++|+.
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~~~~~~w~p~v~~~~~~~G--G~vR~~~~-~~G~---~~~Er--l~~~D~~~~~~~y~i 74 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNSLPDWLPYIPSSKLTEG--GRVRHLAN-PDGE---TIIER--LEVFNDKERYYTYSI 74 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCSTTCHHHHCTTCCEEEEEGG--GTEEEEEC-TTSC---EEEEE--EEEEETTTTEEEEEE
T ss_pred EEEEEEEEeCCHHHHHHHHhccccHHHhCCCeEEEEEeCC--CeEEEEEe-CCCC---EEEEE--EEEEeCCCCEEEEEE
Confidence 4889999999999999999999999999999999998853 44443221 1232 12232 222333468999999
Q ss_pred EecC--CceeEEEEEEEE-cCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 356 VEGD--FDSFQGKWLFEQ-LGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 356 VeGd--Fr~f~G~WtLep-lgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
++|+ ++.+.+.|+|.| .++++|+|+|+..++|. + +....+..++...+...|++|++++|...
T Consensus 75 v~g~~~~~~~~~~~~v~p~~~~~gt~v~w~~~~~p~--g-~~~~~~~~~~~~~~~~~L~~Lk~~~e~~~ 140 (146)
T 3f08_A 75 MNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPV--A-VSDEEAINLVHGIYSDGLKALQHAFLDLE 140 (146)
T ss_dssp EECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEES--S-SCHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred ecCCCceeEEEEEEEEEEecCCCcEEEEEEEEEEeC--C-CCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9986 468999999999 56778999999999983 3 44556788888999999999999988653
No 12
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=99.50 E-value=1.3e-12 Score=119.15 Aligned_cols=138 Identities=11% Similarity=0.179 Sum_probs=98.8
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEE-eccceeEEEEEEEEEEEEee-eCCCeE
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQE-GCKGLLYMVLHARVVMDICE-QHEQEI 351 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~-g~~gll~~~~~~rvVLDV~E-~pprrI 351 (663)
.++++.++.|+||+++||++++|+++|++|+|+|.+++ + .++....... .... ....+..+++ +.+ .++++|
T Consensus 12 ~m~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p~~~~~~-~--~~~~~~~~~~~~~g~-~~~~~~~~~~--~~~~~~~~~i 85 (157)
T 2ns9_A 12 KVRYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVE-V--EDGSFTIELRLSLGP-LRGDARVRAS--FEDLEKPSKA 85 (157)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEE-E--ETTEEEEEEEEESSS-SEEEEEEEEE--EEEEETTTEE
T ss_pred EEEEeeEEEEcCCHHHHHHHHcCHHHHHhhCCCceEEE-E--CCCEEEEEEEEEEcc-eeEEEEEEEE--EEecCCCcEE
Confidence 44799999999999999999999999999999998777 3 4454433322 2222 1233444433 222 367888
Q ss_pred EEEEE-ec---CCceeEEEEEEEEcCCCeEEEEEEEEEEeccC-ccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 352 SFEQV-EG---DFDSFQGKWLFEQLGSHHTLLKYSVESKMQKN-SLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 352 sfr~V-eG---dFr~f~G~WtLeplgdGgTrVtYtve~eP~~g-g~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
.|... .| ++ .+.+.|+|++.+ ++|+|+|+.++++.+. ..+...++...+++.+...+++|++++|+
T Consensus 86 ~~~~~~~~~~~~~-~~~~~~~l~~~~-~gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~lk~~~e~ 156 (157)
T 2ns9_A 86 TVKGSGRGAGSTL-DFTLRFAVEPSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELGE 156 (157)
T ss_dssp EEEEEEECSSEEE-EEEEEEEEEEET-TEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEecCCCccE-EEEEEEEEEeCC-CcEEEEEEEEEEECcCHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88643 33 34 368999999987 6899999998886411 12445678888888999999999998874
No 13
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=99.49 E-value=5.7e-13 Score=125.85 Aligned_cols=138 Identities=14% Similarity=0.124 Sum_probs=99.6
Q ss_pred cCCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEee--cCCEEEEEEEeccceeEEEEEEEEEEEEee-e
Q 006041 270 NGGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSR--ENNKVRILQEGCKGLLYMVLHARVVMDICE-Q 346 (663)
Q Consensus 270 ~~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer--~gn~vrv~q~g~~gll~~~~~~rvVLDV~E-~ 346 (663)
|+.+.++++.+|.|+|||++||++|+|+++||+|.|.|..+++... .|...++...+ +. .+.+ + +++ .
T Consensus 13 ~g~~~~~i~~si~I~Appe~VW~~ltD~~~~~~W~p~v~~~~~~G~~~~G~~~~~~~~~--~~-~~~~--~----v~~~~ 83 (155)
T 3ijt_A 13 MGRGSMKFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISLEGEFTTGQKGKMKMED--MP-ELAF--T----LVEVR 83 (155)
T ss_dssp --CCCEEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEESSSSSTTCEEEEEETT--SC-CEEE--E----ECCCB
T ss_pred cCCCcEEEEEEEEEcCCHHHHHHHHhCcccccccchhhEeeeccCCCCCCCEEEEEeCC--CC-cEEE--E----EEEEe
Confidence 6667889999999999999999999999999999999988875321 23443333222 21 1222 1 222 4
Q ss_pred CCCeEEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHH-HHHHHHhhHHHHHHHHHHHHHh
Q 006041 347 HEQEISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAI-MEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 347 pprrIsfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L-~er~vre~L~~~L~ALR~RAEk 419 (663)
+++++.|+..- ++..+.+.|+|++.++++|+|+++.+++.. .+.|..+ +.+.+.++++..|.+||+++|+
T Consensus 84 p~~~~~~~~~~-p~~~~~~~h~l~p~~~ggTrvt~~~~~~G~--~~~~~~~~~~~~i~~~~~~~l~~LK~~aE~ 154 (155)
T 3ijt_A 84 ENQCFSDLTAT-PFGNVLFEHEILENPDGTISLRHSVSLTDS--DTTEEALAFLKQIFADVPESVGKLKQILET 154 (155)
T ss_dssp TTTEEEEEEEE-TTEEEEEEEEEEECTTSCEEEEEEEEESCC--SCCHHHHHHHHHHHTTHHHHHHHHHHHHTC
T ss_pred CCcEEEEEEec-CCeEEEEEEEEEEcCCCcEEEEEEEEEECC--CcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 67899997543 345778999999987789999999998621 2112222 5578999999999999999986
No 14
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.44 E-value=6e-12 Score=122.04 Aligned_cols=168 Identities=5% Similarity=-0.075 Sum_probs=121.7
Q ss_pred CCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEc-CCHHHHHHHHhccCcccccCcCCcEEEEEeecC
Q 006041 239 SKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVK-APVSEVWNVMTAYETLPEIVPNLAISKILSREN 317 (663)
Q Consensus 239 ~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~-APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g 317 (663)
++|++.++.+|+ +||.+... +.+...++++.+|+ +|+++|+++|.|.+.+++|.+.|.++++++.++
T Consensus 28 ~~W~~~~~~~~v-------~v~~~~~~-----~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~~~ 95 (214)
T 1ln1_A 28 ADWQLLVETSGI-------SIYRLLDK-----KTGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELYEQECNG 95 (214)
T ss_dssp TTCEEEEEETTE-------EEEEEEET-----TTTEEEEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEETT
T ss_pred CCcEEEEECCCe-------EEEEeccC-----CCCcEEEEEEEEECCCCHHHHHHHHcCHHHHHHHHHHHhhEEEeccCC
Confidence 489999999999 99999543 23466799999995 999999999999999999999999999998755
Q ss_pred CEEEEEEE-ecc-ceeEEEEEEEEEEEEeeeCCCe---EEEEEEe--------cCCc--eeEEEEEEEEcCCCeEEEEEE
Q 006041 318 NKVRILQE-GCK-GLLYMVLHARVVMDICEQHEQE---ISFEQVE--------GDFD--SFQGKWLFEQLGSHHTLLKYS 382 (663)
Q Consensus 318 n~vrv~q~-g~~-gll~~~~~~rvVLDV~E~pprr---Isfr~Ve--------GdFr--~f~G~WtLeplgdGgTrVtYt 382 (663)
...+++. ... .+..--|.........+..... +....++ |.++ .+.|.|.|++.++++|+|+|.
T Consensus 96 -~~i~~~~~~~p~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~ 174 (214)
T 1ln1_A 96 -ETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMY 174 (214)
T ss_dssp -EEEEEEEECCCTTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEE
T ss_pred -CEEEEEEEEcCCCCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEE
Confidence 3333332 211 1110011111111111112222 2233332 3333 578999999998889999999
Q ss_pred EEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 383 VESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 383 ve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
.+++|+ +++|.++++.++.+.+...|++|++++++..
T Consensus 175 ~~~Dp~--G~iP~~l~n~~~~~~~~~~l~~l~k~~~~y~ 211 (214)
T 1ln1_A 175 YFDNPG--GQIPSWLINWAAKNGVPNFLKDMARACQNYL 211 (214)
T ss_dssp EEECCS--SCCCHHHHHHHHHTHHHHHHHHHHHHHHTC-
T ss_pred EEECCC--CcccHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 999995 7899999999999999999999999998653
No 15
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.40 E-value=9e-12 Score=118.44 Aligned_cols=131 Identities=20% Similarity=0.253 Sum_probs=103.4
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEE-EEEeecC----CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAIS-KILSREN----NKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sS-rVLer~g----n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
.+..+++|+|||++||+++.|+++| .|+|.+.+| ++++.++ +.++.. + +. + ..+ ++..+..++.
T Consensus 3 ~v~~si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~--g--g~--v--~Er--l~~~D~~~~~ 71 (160)
T 3p51_A 3 KVYNSIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLL--N--GE--F--LDT--LIAYSEIERR 71 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEE--T--TT--E--EEE--EEEEETTTTE
T ss_pred EEEEEEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEE--C--CE--E--EEE--EEEEcCCCcE
Confidence 4889999999999999999999999 999999988 8886543 234443 3 32 1 222 2333345689
Q ss_pred EEEEEEecCC-------ceeEEEEEEEEcC-CCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 351 ISFEQVEGDF-------DSFQGKWLFEQLG-SHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 351 Isfr~VeGdF-------r~f~G~WtLeplg-dGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
++|++++|++ +.+.++|+|.|.+ +++|.|+|+..|++.. .++..++...+...|++|++++|+...
T Consensus 72 ~sY~ii~g~l~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~~------~~~~~~~~~~~~~~L~~Lk~~~e~~~~ 145 (160)
T 3p51_A 72 IMYSMDEGPSPVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESAS------TEAVEYMNTVYRSLLADLAAEFTSESR 145 (160)
T ss_dssp EEEEEEECSTTSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESC------SHHHHHHHHHHHHHHHHHHHHSCTTTC
T ss_pred EEEEEecCCCcccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeCH------HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999975 4799999999986 6799999999999841 266778888999999999999997654
Q ss_pred C
Q 006041 423 D 423 (663)
Q Consensus 423 ~ 423 (663)
.
T Consensus 146 ~ 146 (160)
T 3p51_A 146 R 146 (160)
T ss_dssp C
T ss_pred c
Confidence 4
No 16
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=99.26 E-value=1.5e-10 Score=113.86 Aligned_cols=162 Identities=13% Similarity=0.140 Sum_probs=115.7
Q ss_pred CCceeec-ccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHHHHH-hccCcccccCcCCcEEEEEeec
Q 006041 239 SKWGVFG-QVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVM-TAYETLPEIVPNLAISKILSRE 316 (663)
Q Consensus 239 ~~W~~~~-~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVWaVL-TDyEnyPeWiP~V~sSrVLer~ 316 (663)
++|++.+ +.+|+ +||.+..++ .| +.++++.+|++|+++|+++| .|.+..++|.++|.++++++.-
T Consensus 31 ~gW~~~~~~~~gv-------~vy~~~~~~----~g--~~~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~ 97 (221)
T 3p0l_A 31 EGWKKESQQDNGD-------KVMSKVVPD----VG--KVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKI 97 (221)
T ss_dssp TTCEEEEECTTSC-------EEEEEECSS----SC--EEEEEEEEESSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEEC
T ss_pred CCCeEeeecCCCc-------EEEEEEcCC----Cc--eEEEEEEEEcCCHHHHHHHHHhccchhhhcCcchheEEEEEec
Confidence 5899996 88999 999996332 22 56788888999999999998 7999999999999999999874
Q ss_pred CC-EEEEEEE-ecc---ceeEEEEEEEEEEEEee-eCCCeEEE-EEEe--------cCCc--eeEEEEEEEEcCCC--eE
Q 006041 317 NN-KVRILQE-GCK---GLLYMVLHARVVMDICE-QHEQEISF-EQVE--------GDFD--SFQGKWLFEQLGSH--HT 377 (663)
Q Consensus 317 gn-~vrv~q~-g~~---gll~~~~~~rvVLDV~E-~pprrIsf-r~Ve--------GdFr--~f~G~WtLeplgdG--gT 377 (663)
++ ...+++. ... .+...-|.. ++... .....+.. ..++ |.++ .+.+.|.++|.+++ +|
T Consensus 98 ~~~t~I~y~~~~~~~~~~v~~RDfv~---~r~~~~~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t 174 (221)
T 3p0l_A 98 GKDTFITHELAAEAAGNLVGPRDFVS---VRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKT 174 (221)
T ss_dssp SSSEEEEEEEECC---CCSCCEEEEE---EEEEEECSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEE
T ss_pred CCCeEEEEEeeccccCCccCCceEEE---EEEEEEcCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcE
Confidence 43 3333332 110 110011111 11111 11222211 2222 3343 45688999999876 89
Q ss_pred EEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHH
Q 006041 378 LLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVE 418 (663)
Q Consensus 378 rVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAE 418 (663)
+|+|..+++|+ |++|.++++.++...+...+++||++++
T Consensus 175 ~vt~~~~~Dp~--G~iP~~lvn~~~~~~~~~~~~~Lr~~~~ 213 (221)
T 3p0l_A 175 KLTWLLSIDLK--GWLPKSIINQVLSQTQVDFANHLRKRLE 213 (221)
T ss_dssp EEEEEECEECC--SSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEecCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999995 7899999999999999999999999987
No 17
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.22 E-value=1.8e-10 Score=115.51 Aligned_cols=175 Identities=14% Similarity=0.220 Sum_probs=115.8
Q ss_pred CCCceeecccccCCCCcccceEEEEeeccccccCCee-EEEEEEEEEc-CCHHHHHHHHhccCcccccCcCCcEEEEEee
Q 006041 238 NSKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVH-RCVVASITVK-APVSEVWNVMTAYETLPEIVPNLAISKILSR 315 (663)
Q Consensus 238 ~~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~-r~VrasIvI~-APpeqVWaVLTDyEnyPeWiP~V~sSrVLer 315 (663)
+.+|++..+.+|+ +||.+... .+|.. ..+++..+|. +++++|++++.|++.+++|.+.+.++++++.
T Consensus 46 ~~~W~~~~~~~gv-------~vy~~~~~----~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~ 114 (255)
T 2e3n_A 46 DANWQLVVEEGEM-------KVYRREVE----ENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVET 114 (255)
T ss_dssp CTTEEEEEEETTE-------EEEEECCE----ETTEECCCEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEE
T ss_pred CCCcEEEEeCCCE-------EEEEEEcC----CCCceeeeEEEEEEEcCCCHHHHHHHHhCcchHhhhhhhcceeEEEEE
Confidence 4589999999999 99999532 13332 1466666665 9999999999999999999999999999988
Q ss_pred -cCCEEEEEEE-ec-cce-----eEEEEE------------EEEEEEEeeeCC------CeEEEEE----EecCCc-eeE
Q 006041 316 -ENNKVRILQE-GC-KGL-----LYMVLH------------ARVVMDICEQHE------QEISFEQ----VEGDFD-SFQ 364 (663)
Q Consensus 316 -~gn~vrv~q~-g~-~gl-----l~~~~~------------~rvVLDV~E~pp------rrIsfr~----VeGdFr-~f~ 364 (663)
+++...+++. .. ..+ ++.+.. ..+++......+ ..+++.. ..|.+- ...
T Consensus 115 i~~~~~i~y~~~~~p~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~ 194 (255)
T 2e3n_A 115 LADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPE 194 (255)
T ss_dssp EETTEEEEEEEECCCTTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---
T ss_pred cCCCCEEEEEEeecCCCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCC
Confidence 5665444432 11 111 111100 000110000000 1122221 111110 112
Q ss_pred EEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCCc
Q 006041 365 GKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGDNSL 426 (663)
Q Consensus 365 G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~~~~ 426 (663)
|.|.|++ ++++|+|+|...++|+ |++|.++++.++...++..|+.|++++++...++.+
T Consensus 195 g~~~l~~-~~~~t~vt~~~~~Dp~--G~iP~~lvn~~~~~~~~~~l~~L~k~v~~~~~~~~~ 253 (255)
T 2e3n_A 195 GNQEISR-DNILCKITYVANVNPG--GWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPI 253 (255)
T ss_dssp CCCCCCG-GGEEEEEEEEEEEECS--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccccc-CCCcEEEEEEEEeCCC--CccCHHHHHHHHhccccHHHHHHHHHHHHhccCCCc
Confidence 6677766 4568999999999995 789999999999999999999999999988877553
No 18
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=99.20 E-value=9.2e-10 Score=104.09 Aligned_cols=143 Identities=9% Similarity=0.098 Sum_probs=104.2
Q ss_pred eEEEEEEEEEcCCHHHHHHHHh-ccCc-ccccCcCCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 274 HRCVVASITVKAPVSEVWNVMT-AYET-LPEIVPNLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLT-DyEn-yPeWiP~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
...+..++.|+||+++||+++. |+.+ +|+|+|.++++++++.++ +.++.+.-. .+...-.+..+ ++..+...+
T Consensus 3 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg~Gsir~~~~~-~g~~~~~~kEr--l~~~D~~~~ 79 (158)
T 2qim_A 3 VFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGGPGTIKKLTFI-EGGESKYVLHK--IEAIDEANL 79 (158)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSSTTCEEEEEEE-ETTEEEEEEEE--EEEEEGGGT
T ss_pred CEEEEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCCCCeEEEEEEc-CCCcceeEEEE--EEEEecCCC
Confidence 3468899999999999999999 9996 599999999999998754 234433222 22211112222 333445779
Q ss_pred eEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 350 EISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 350 rIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
.++|+.++|+ ++.+.++|+|.|.++++|.+++++++++..+...++..+. ...+.+..++++|.+.+-+.
T Consensus 80 ~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~~~~~~~~~-~~~~~~~~~~k~ie~yll~~ 154 (158)
T 2qim_A 80 GYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIETKGDAQPNEEEGK-AAKARGDAFFKAIESYLSAH 154 (158)
T ss_dssp EEEEEEEEESSCCCSEEEEEEEEEEEECSTTCEEEEEEEEEEESTTCCCCHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEeccCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 9999999997 5588999999998777899999999998754434433332 45677888888888887553
No 19
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=99.20 E-value=2e-09 Score=101.72 Aligned_cols=141 Identities=11% Similarity=0.147 Sum_probs=103.3
Q ss_pred EEEEEEEEcCCHHHHHHHHh-ccCc-ccccCcCCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeE
Q 006041 276 CVVASITVKAPVSEVWNVMT-AYET-LPEIVPNLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEI 351 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLT-DyEn-yPeWiP~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrI 351 (663)
.+..++.|+||+++||+++. |+.+ +|+|+|.++++++++.++ +.++.+.-. .+...-.+..+ ++..++..+.+
T Consensus 4 ~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~-~G~~~~~~kEr--l~~~D~~~~~~ 80 (157)
T 1tw0_A 4 VFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGGVGTIKKITAN-EGDKTSFVLQK--VDAIDEANLGY 80 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSSTTCEEEEEEE-ETTEEEEEEEE--EEEEETTTTEE
T ss_pred EEEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCCCCeEEEEEee-CCCccceEEEE--EEEEeccCCEE
Confidence 57889999999999999999 9985 699999999999998754 234433222 23211112222 34444567999
Q ss_pred EEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 352 SFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 352 sfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
+|+.++|+ ++.+.++|+|.|.++++|.++++.++++..+...++..+. ...+.+..++++|.+.+-+.
T Consensus 81 ~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~~~~~~~~~-~~~~~~~~~~k~ie~yll~~ 153 (157)
T 1tw0_A 81 DYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKGDAPLSDAVRD-DALAKGAGFFKAIEGYVLAN 153 (157)
T ss_dssp EEEEEECTTSCTTEEEEEEEEEEEECSSSSEEEEEEEEEEESTTCCCCHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 99999997 5688999999998777899999999998754434433332 45677888889888887553
No 20
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=99.19 E-value=6.4e-10 Score=105.25 Aligned_cols=142 Identities=16% Similarity=0.275 Sum_probs=103.6
Q ss_pred EEEEEEEEEcCCHHHHHHHHh-ccCc-ccccCc-CCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 275 RCVVASITVKAPVSEVWNVMT-AYET-LPEIVP-NLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLT-DyEn-yPeWiP-~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
..+..++.|+||+++||+++. |+.+ +|.|+| .++++++++.++ +.++.+.-. .+...-.+..+ ++..++..+
T Consensus 3 ~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~-~G~~~~~~kEr--l~~~D~~~~ 79 (159)
T 1e09_A 3 FTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFG-EGSQYGYVKHK--IDSIDKENY 79 (159)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEEC-CSSSCEEEEEE--EEEEETTTT
T ss_pred EEEEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCCCceEEEEEec-CCCCceEEEEE--EEEEcCCCC
Confidence 358889999999999999999 9985 799999 678999998754 234443322 23110112222 344445779
Q ss_pred eEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 350 EISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 350 rIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
.+.|+.++|+ ++.+.+.|+|.+.++++|.+++++++++..+..+++.-++ ...+.+..++++|.+.+-+.
T Consensus 80 ~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~~~~~~~~~-~~~~~~~~~~k~ie~yll~~ 154 (159)
T 1e09_A 80 SYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVK-AGKEKASNLFKLIETYLKGH 154 (159)
T ss_dssp EEEEEECCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEEEEEECSSCCCCHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEecccCcccceEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 9999999997 4688999999998777899999999998754444443333 55777888899998887653
No 21
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=99.16 E-value=9.5e-10 Score=108.58 Aligned_cols=166 Identities=11% Similarity=0.044 Sum_probs=116.2
Q ss_pred CCCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeec-
Q 006041 238 NSKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRE- 316 (663)
Q Consensus 238 ~~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~- 316 (663)
.++|++.++.+|| +||.+..++ ...+.++++.+|++|+++|+++|.|.+..++|.+++.++++++.-
T Consensus 42 ~~~W~~~~~~~gv-------~vy~~~~~~-----~~~~~~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id 109 (224)
T 1jss_A 42 EDEWRVAKKAKDV-------TVWRKPSEE-----FNGYLYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFE 109 (224)
T ss_dssp GGGCEEEEEETTE-------EEEEEECSS-----SSSEEEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECS
T ss_pred CCCCEEEEECCCE-------EEEEEeccC-----CCceEEEEEEEEeCCHHHHHHHHhCcccccccccceeeEEEEEEcC
Confidence 4589999999999 999994332 123457888899999999999999999999999999999999873
Q ss_pred CCEEEEEEEecc--c--eeEEEEEEEEEEEEeeeCCCe-EEEEEEe------cCCc--eeEEEEEEEEcCCC--eEEEEE
Q 006041 317 NNKVRILQEGCK--G--LLYMVLHARVVMDICEQHEQE-ISFEQVE------GDFD--SFQGKWLFEQLGSH--HTLLKY 381 (663)
Q Consensus 317 gn~vrv~q~g~~--g--ll~~~~~~rvVLDV~E~pprr-Isfr~Ve------GdFr--~f~G~WtLeplgdG--gTrVtY 381 (663)
++...+++.... + +...-|...... ....+.. +....++ |.++ ...|.|.++|.+++ .|+|+|
T Consensus 110 ~~~~I~y~~~~~~~~~~v~~RDfv~~r~~--~~~~~~~vi~~~Sv~hp~~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~ 187 (224)
T 1jss_A 110 ENCCVMRYTTAGQLLNIISPREFVDFSYT--VGYEEGLLSCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTG 187 (224)
T ss_dssp TTEEEEEEEECCBTTTTBCCEEEEEEEEE--EEETTEEEEEEEECCCCCCCTTSEECEECSEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEEcccccCCCCCCCeEEEEEEE--EEcCCeEEEEEeeeecCCCCCCCEEEEecccEEEEEEcCCCCCceEEEE
Confidence 444334433111 1 111111111000 0112222 1112222 3344 45688999998653 799999
Q ss_pred EEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 382 SVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 382 tve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
.++++|+ |++|.++++.++...+...+++||+++++
T Consensus 188 ~~~~Dp~--G~iP~~lvn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 188 YIQTDLR--GMIPQSAVDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp EECEECC--SCCCHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEeCCC--CCccHHHHHHHHHHhHHHHHHHHHHHHhh
Confidence 9999995 78999999999999999999999998754
No 22
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.14 E-value=4e-09 Score=103.06 Aligned_cols=143 Identities=15% Similarity=0.221 Sum_probs=103.4
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCC---EEEEEEEeccceeEEEEEEEEEEEEeeeCCCeE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENN---KVRILQEGCKGLLYMVLHARVVMDICEQHEQEI 351 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn---~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrI 351 (663)
-......+|+||+++||+++.||.+++.|.|.++++ +++..++ .+|..... .+.-.-....+ |+..+...+.+
T Consensus 27 ~~~~v~~~I~Apa~~VW~~v~df~~l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~-~G~p~~~vkEr--L~~~D~~~~~~ 102 (183)
T 3rt2_A 27 CSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRC-VVQGKKLEVGSVREVDLK-SGLPATKSTEV--LEILDDNEHIL 102 (183)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEE-EESSSCCCTTCEEEEEEC-CSSTTCEEEEE--EEEEETTTTEE
T ss_pred eEEEEEEEEeCCHHHHHHHHhCcCchhhcCccceEE-EeeCCCCCCCcEEEEEeC-CCCccceEEEE--EEEEECCCCEE
Confidence 345666799999999999999999999999999999 6654222 34433222 22100011222 33444456899
Q ss_pred EEEEEecC--CceeEEEEEEEEcC-CC--eEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 352 SFEQVEGD--FDSFQGKWLFEQLG-SH--HTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 352 sfr~VeGd--Fr~f~G~WtLeplg-dG--gTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
+|+.++|+ ++.+.+..+|.|.+ +| +|.|+|+..|+|.. + ....-+..++..-+...|++|++.+|+....
T Consensus 103 sY~Iieg~lp~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~-g-~~~e~~~~~~~~i~~~~L~~L~~~~e~~~~~ 177 (183)
T 3rt2_A 103 GIRIVGGDHRLKNYSSTISLHSETIDGKTGTLAIESFVVDVPE-G-NTKEETCFFVEALIQCNLNSLADVTERLQAE 177 (183)
T ss_dssp EEEEEEESCSCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCT-T-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999986 56899999999986 55 69999999999743 2 2234567778888889999999999988654
No 23
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=99.12 E-value=1.7e-09 Score=101.96 Aligned_cols=140 Identities=10% Similarity=0.136 Sum_probs=102.5
Q ss_pred EEEEEEEEcCCHHHHHHHHh-ccCc-ccccCcCCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeE
Q 006041 276 CVVASITVKAPVSEVWNVMT-AYET-LPEIVPNLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEI 351 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLT-DyEn-yPeWiP~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrI 351 (663)
.+..++.|+||+++||+++. |+.+ +|+|+|.++++++++.++ +.++.+.-. .+...-.+..+ ++..+...+.+
T Consensus 4 ~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~-~G~~~~~~kEr--l~~~D~~~~~~ 80 (155)
T 1icx_A 4 AFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGGPGTIKKIIAI-HDGHTSFVLHK--LDAIDEANLTY 80 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSSTTCEEEEEEE-SSSSEEEEEEE--EEEEEGGGTEE
T ss_pred EEEEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCCCCeEEEEEEe-cCCcceeEEEE--EEEEeccCCEE
Confidence 57889999999999999999 9985 699999999999998754 234433222 23211112233 34444567999
Q ss_pred EEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 352 SFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 352 sfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
+|+.++|+ ++.+.++|+|.|.++++|.++++.++++..+. +++ ..-+...+.+..++++|.+.+-+.
T Consensus 81 ~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~-~~~-~~~~~~~~~~~~~~k~ie~yll~~ 152 (155)
T 1icx_A 81 NYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGDV-LSE-TVRDQAKFKGLGLFKAIEGYVLAH 152 (155)
T ss_dssp EEEEEEETTSCTTEEEEEEEEEEEECGGGCEEEEEEEEEEESSSS-CCH-HHHTTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCC-CCH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999997 56889999999987667999999999997544 433 322244567888888888877553
No 24
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=99.10 E-value=8.1e-09 Score=101.80 Aligned_cols=166 Identities=11% Similarity=0.063 Sum_probs=117.5
Q ss_pred CCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHHHHH--hccCcccccCcCCcEEEEEeec
Q 006041 239 SKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVM--TAYETLPEIVPNLAISKILSRE 316 (663)
Q Consensus 239 ~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVWaVL--TDyEnyPeWiP~V~sSrVLer~ 316 (663)
++|+..++.+|+ +||.+..++ .....++++.+|++++++|+++| .|.+..++|.+.+.++++++.-
T Consensus 43 ~~W~~~~~~~gv-------~v~~~~~~~-----~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i 110 (231)
T 2r55_A 43 AGWKICREGNGV-------SVSWRPSVE-----FPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSI 110 (231)
T ss_dssp SSCEEEECCSSE-------EEEEEECSS-----SSSEEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEEC
T ss_pred CCCEEEEeCCCE-------EEEEEccCC-----CCCcEEEEEEEECCCHHHHHHHHHhhCcchhhhhccccceeEEEEEc
Confidence 489999999999 999996432 12456788889999999999999 9999999999999999999874
Q ss_pred CC-EEEEEEEecc----ceeEEEEEEEEEEEEeee-CCCe--EEEEEEe--------cCCc--eeEEEEEEEEcC--CCe
Q 006041 317 NN-KVRILQEGCK----GLLYMVLHARVVMDICEQ-HEQE--ISFEQVE--------GDFD--SFQGKWLFEQLG--SHH 376 (663)
Q Consensus 317 gn-~vrv~q~g~~----gll~~~~~~rvVLDV~E~-pprr--Isfr~Ve--------GdFr--~f~G~WtLeplg--dGg 376 (663)
++ ...+++.... .+...-|. +++.... .+.. +....++ |.++ .+.+.|.++|.+ ++.
T Consensus 111 ~~~~~i~~~~~~~~~~~~v~~RDfv---~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~ 187 (231)
T 2r55_A 111 TDTLCVSRTSTPSAAMKLISPRDFV---DLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTK 187 (231)
T ss_dssp SSSEEEEEEECCCBTTTTBCCEEEE---EEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCC
T ss_pred CCCEEEEEEEeccccCCccCCCeEE---EEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCc
Confidence 43 3333433211 11111111 1111111 2222 2334443 2233 346789999975 568
Q ss_pred EEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 377 TLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 377 TrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
|+|+|...++|+ |++|.++++.++...+...+++|+++++++.
T Consensus 188 t~vt~~~~~Dp~--G~iP~~lvn~~~~~~~~~~~~~Lr~~~~~~~ 230 (231)
T 2r55_A 188 TNLVTFFHTDLS--GYLPQNVVDSFFPRSMTRFYANLQKAVKQFH 230 (231)
T ss_dssp EEEEEEECEECC--SSCCHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEEEEEEeCCC--CCccHHHHHHHHhHhHHHHHHHHHHHHHHhc
Confidence 999999999995 7899999999999999999999999998864
No 25
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=99.09 E-value=3e-09 Score=104.94 Aligned_cols=165 Identities=10% Similarity=0.077 Sum_probs=116.1
Q ss_pred CCceeeccc-ccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHH-HHHhccCcccccCcCCcEEEEEeec
Q 006041 239 SKWGVFGQV-CRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVW-NVMTAYETLPEIVPNLAISKILSRE 316 (663)
Q Consensus 239 ~~W~~~~~~-~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVW-aVLTDyEnyPeWiP~V~sSrVLer~ 316 (663)
++|++.+.. +|+ .||.+..++ .|. .+++..+|++|+++|+ +++.|.+..++|.+.|.++++++.-
T Consensus 42 ~~W~~~~~~~~g~-------~vy~~~~~~----~g~--~~k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~ 108 (229)
T 1em2_A 42 ENWKFEKNNEYGD-------TVYTIEVPF----HGK--TFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRV 108 (229)
T ss_dssp GGCEEEEECTTCC-------EEEEEEETT----TEE--EEEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEE
T ss_pred CCCEEEEecCCCC-------EEEEEecCC----CCc--eEEEEEEecCCHHHHHHHHHhCccchhhcccccceEEEEEec
Confidence 489999987 799 999995431 232 3567778899999999 9999999999999999999999874
Q ss_pred -CCEEEEEEEecc---c-eeEEEEEEEEEEEEeeeCCCe--EEEEEEe--------cCCc--eeEEEEEEEEcC--CCeE
Q 006041 317 -NNKVRILQEGCK---G-LLYMVLHARVVMDICEQHEQE--ISFEQVE--------GDFD--SFQGKWLFEQLG--SHHT 377 (663)
Q Consensus 317 -gn~vrv~q~g~~---g-ll~~~~~~rvVLDV~E~pprr--Isfr~Ve--------GdFr--~f~G~WtLeplg--dGgT 377 (663)
++...+++.... . +...-|.. ++.....+.. +....++ |.++ .+.+.|.++|.+ ++.|
T Consensus 109 ~~~t~I~~~~~~p~~~~~~~~RDfv~---~r~~~~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t 185 (229)
T 1em2_A 109 EDNTLISYDVSAGAAGGVVSPRDFVN---VRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVC 185 (229)
T ss_dssp TTTEEEEEEEECCBTTTTBCCEEEEE---EEEEEECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCE
T ss_pred CCCeEEEEEEecCcCCCCcCCCeeEE---EEEEEEcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcE
Confidence 343334443211 1 11111111 1111111222 2222332 3333 346789999975 4679
Q ss_pred EEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 378 LLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 378 rVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+|+|..+++|+ |++|.++++.++...+...+++||+++++..
T Consensus 186 ~vt~~~~~Dp~--G~iP~~l~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 186 TFVWILNTDLK--GRLPRYLIHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp EEEEEECEECC--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999995 7899999999999999999999999998764
No 26
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.05 E-value=4.7e-09 Score=104.32 Aligned_cols=148 Identities=12% Similarity=0.192 Sum_probs=106.4
Q ss_pred cCCeeEEEEEEE--EEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEee
Q 006041 270 NGGVHRCVVASI--TVKAPVSEVWNVMTAYETLPEIVPNLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICE 345 (663)
Q Consensus 270 ~~g~~r~VrasI--vI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E 345 (663)
|+....++..++ .|+||+++||+++.||.+++.|.|.+++|++ +.++ +.+|..... .+.-.-.... .|+..+
T Consensus 45 h~p~~~k~~~~V~~~I~ApadkVW~lV~Df~~l~kW~P~V~s~ev-eGdg~vGsVR~vt~~-~G~p~~~vkE--rL~~lD 120 (205)
T 3oqu_A 45 HLCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV-IGDPEIGSLREVNVK-SGLPATTSTE--RLELLD 120 (205)
T ss_dssp CCCCTTEEEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEEC-CSSCCTTCEEEEEEC-TTSSCSEEEE--EEEEEE
T ss_pred cCCCCcEEEEEEeeEEcCCHHHHHHHHhCcCChhHcCccceEEEe-eCCCCCCcEEEEEEc-CCCccceEEE--EEEEEE
Confidence 555556788899 9999999999999999999999999999975 4332 234433221 2210001122 234444
Q ss_pred eCCCeEEEEEEecC--CceeEEEEEEEEcC-CC--eEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 346 QHEQEISFEQVEGD--FDSFQGKWLFEQLG-SH--HTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 346 ~pprrIsfr~VeGd--Fr~f~G~WtLeplg-dG--gTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
...+.++|+.++|+ ++.|.++++|.|.+ +| +|.+.+...++|.. + ...--+..++..-+...|++|++.+|+.
T Consensus 121 de~~~~sYsIieG~lpv~~Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~-g-~t~e~~~~~v~~v~~~gL~~L~~~~e~~ 198 (205)
T 3oqu_A 121 DEEHILGIKIIGGDHRLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQ-G-NTKDETCYFVEALIRCNLKSLADVSERL 198 (205)
T ss_dssp TTTTEEEEEEEEESSSCTTCEEEEEEEEECCCC-CEEEEEEEEEEECCT-T-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecCcceeEEEEEEEEEEccCCCCceEEEEEEEeccCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55689999999996 55899999999987 34 68888888888642 2 3334567778888889999999999987
Q ss_pred hCC
Q 006041 421 EGD 423 (663)
Q Consensus 421 ~a~ 423 (663)
...
T Consensus 199 ~~~ 201 (205)
T 3oqu_A 199 ASQ 201 (205)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
No 27
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.04 E-value=2.9e-09 Score=101.71 Aligned_cols=143 Identities=13% Similarity=0.191 Sum_probs=98.8
Q ss_pred ccCCeeEEEEEEEEEcCCHHHHHHH-HhccCcccccCc-CCcEEEEEeec-CC--EEEEEEEeccceeEEEEEEEEEEEE
Q 006041 269 ENGGVHRCVVASITVKAPVSEVWNV-MTAYETLPEIVP-NLAISKILSRE-NN--KVRILQEGCKGLLYMVLHARVVMDI 343 (663)
Q Consensus 269 e~~g~~r~VrasIvI~APpeqVWaV-LTDyEnyPeWiP-~V~sSrVLer~-gn--~vrv~q~g~~gll~~~~~~rvVLDV 343 (663)
++....-.+..++.|+||+++||++ +.|+..+|.|+| .++++++++.+ ++ .++.+.-...+.. ..+..+ ++.
T Consensus 11 ~~~~~~~k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg~~-~~~kEr--l~~ 87 (166)
T 2i9y_A 11 EASSLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEA-KVAKER--IEA 87 (166)
T ss_dssp CCSSSEEEEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETTEE-EEEEEE--EEE
T ss_pred cccCCccEEEEEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCCCCCCeEEEEEEecCCCc-eEEEEE--EEE
Confidence 4555455899999999999999999 569999999999 89999998765 22 2333322222211 122333 333
Q ss_pred eeeCCCeEEEEEEecC----CceeEEEEEEEEcCC-CeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHH
Q 006041 344 CEQHEQEISFEQVEGD----FDSFQGKWLFEQLGS-HHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVE 418 (663)
Q Consensus 344 ~E~pprrIsfr~VeGd----Fr~f~G~WtLeplgd-GgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAE 418 (663)
.+...+.++|+.++|+ ++.+.++|+|.+.++ ++|.|+|++.|++..+. .|.+ . .+.+.+..++++|.+.+-
T Consensus 88 iD~~~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~gs~v~wt~~ye~~~~~-~~~p--~-~~~~~~~~~~k~ie~~l~ 163 (166)
T 2i9y_A 88 VEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEE-VAHP--E-TLLQFCVEVSKEIDEHLL 163 (166)
T ss_dssp EETTTTEEEEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEESSTT-TCCT--H-HHHHHHHHHHHHHHHHHH
T ss_pred EeccCcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCCCcEEEEEEEEEECCCC-CCCH--H-HHHHHHHHHHHHHHHHHh
Confidence 4456799999999998 468899999999743 37999999999975332 2222 1 122456667777766654
No 28
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=98.98 E-value=7.9e-09 Score=105.70 Aligned_cols=165 Identities=8% Similarity=0.145 Sum_probs=116.6
Q ss_pred CCCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEee-c
Q 006041 238 NSKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSR-E 316 (663)
Q Consensus 238 ~~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer-~ 316 (663)
.++|.+.++.+|| +||.+ +.++ ...++++.+|++|++.||++|.|.+..++|.+++.+++++++ +
T Consensus 65 ~~gW~~~~~~~gv-------~Vy~~------~~~~-~l~~k~~~~v~~~~~~v~~~L~D~~~R~~WD~~~~~~~vle~id 130 (258)
T 3fo5_A 65 KDNWVLSSEISQV-------RLYTL------EDDK-FLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVD 130 (258)
T ss_dssp CSCCEEEEEETTE-------EEEEE------ECSS-CEEEEEEEEESSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEE
T ss_pred cCCCEEEecCCCe-------EEEEE------ECCC-ceEEEEEEEEeCCHHHHHHHHhCchhHhHhhhhccEEEEEEEcC
Confidence 3599999999999 99997 3344 445789999999999999999999999999999999999976 4
Q ss_pred CCEEEEEEEeccc----eeEEEEEEEEEEEEe---eeCCC--eEEEEEEe--------cCCc--eeEEEEEEEEcCCCeE
Q 006041 317 NNKVRILQEGCKG----LLYMVLHARVVMDIC---EQHEQ--EISFEQVE--------GDFD--SFQGKWLFEQLGSHHT 377 (663)
Q Consensus 317 gn~vrv~q~g~~g----ll~~~~~~rvVLDV~---E~ppr--rIsfr~Ve--------GdFr--~f~G~WtLeplgdGgT 377 (663)
++.+ +++..... +..--|. ++... ..... .|....+. |.++ ...+.|.++|.+++.|
T Consensus 131 ~~~i-vY~~~~p~~~~~v~~RDFV---~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t 206 (258)
T 3fo5_A 131 EDDA-IYHVTSPALGGHTKPQDFV---ILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLT 206 (258)
T ss_dssp TTEE-EEEEEECCCTTCSSCEEEE---EEEEEECCSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEE
T ss_pred CCeE-EEEEecCCccCCCCCCEEE---EEEEEEeccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCE
Confidence 4443 33321111 1001111 11111 11222 34445444 2233 5579999999999999
Q ss_pred EEEEEEEEEeccCccchHHHHHH-HHHhhHHHHHHHHHHHHHhhhCC
Q 006041 378 LLKYSVESKMQKNSLLSEAIMEE-VIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 378 rVtYtve~eP~~gg~LP~~L~er-~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
+|+|..+++| +.+|.++.|. .+...+..++.++++++++....
T Consensus 207 ~VtY~~q~dp---G~lP~~~~n~~g~s~~~~~t~~~~~~fl~~~~~~ 250 (258)
T 3fo5_A 207 KVSYYNQATP---GVLNYVTTNVAGLSSEFYTTFKACEQFLLDNRND 250 (258)
T ss_dssp EEEEEESCCG---GGHHHHHHHHHTSCCHHHHHHHHHHHHHHHTC--
T ss_pred EEEEEEeeCC---CCCCceEEeccccchHHHHHHHHHHHHHHhcccc
Confidence 9999999998 4599988887 34556688899999999886443
No 29
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=98.97 E-value=6.3e-09 Score=104.40 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=115.7
Q ss_pred cCCCceeecccccCCCCcccceEEEEeeccccccCCeeEEEEEEEEEcCCHHHHH-HHHhccCcccccCcCCcEEEEEee
Q 006041 237 LNSKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVW-NVMTAYETLPEIVPNLAISKILSR 315 (663)
Q Consensus 237 ~~~~W~~~~~~~gi~~~~~~deV~lRr~D~~~e~~g~~r~VrasIvI~APpeqVW-aVLTDyEnyPeWiP~V~sSrVLer 315 (663)
..++|++.++.+|| +||.+... .+...+.++++.+|++++++|+ .+|.| .++|.+.|.++++++.
T Consensus 48 ~~~gW~~~~~~~gi-------~V~~k~~~----~~~~~~~~K~~~~v~~~~~~v~~~ll~d---r~~Wd~~~~~~~vle~ 113 (237)
T 2pso_A 48 KFKGWVTCSSTDNT-------DLAFKKVG----DGNPLKLWKASVEVEAPPSVVLNRVLRE---RHLWDEDFVQWKVVET 113 (237)
T ss_dssp HCCSCEEECCSSSC-------EEEEECCC----SSCCCCEEEEEEEESSCHHHHHHHHHHC---GGGTCTTBCCCEEEEE
T ss_pred CCCCCEEEecCCCe-------EEEEEEcC----CCCCcEEEEEEEEEcCChHHHHHHHHhh---hhhHHhhhceEEEEEE
Confidence 35689999999999 99999531 1333567899999999998886 68888 7999999999999987
Q ss_pred -cCCEEEEEEE-ecc-ceeEEEEEEEEEEEEeee--CC--CeEEEEEEe-------cCCc--eeEEEEEEEEcCCCeEEE
Q 006041 316 -ENNKVRILQE-GCK-GLLYMVLHARVVMDICEQ--HE--QEISFEQVE-------GDFD--SFQGKWLFEQLGSHHTLL 379 (663)
Q Consensus 316 -~gn~vrv~q~-g~~-gll~~~~~~rvVLDV~E~--pp--rrIsfr~Ve-------GdFr--~f~G~WtLeplgdGgTrV 379 (663)
+++...+++. ... .+...-|. +++.... .+ -.|....++ |.++ .+.+.|.++|.++++|+|
T Consensus 114 id~~~~I~y~~~~~p~p~~~RDfv---~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~v 190 (237)
T 2pso_A 114 LDRQTEIYQYVLNSMAPHPSRDFV---VLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRL 190 (237)
T ss_dssp EETTEEEEEEEECCSSSCCCEEEE---EEEEEESCCGGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEE
T ss_pred cCCCcEEEEEEecCCCCcCCeEEE---EEEEEEEECCCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEE
Confidence 3444333332 110 01000011 1111110 11 123233332 3344 568999999998889999
Q ss_pred EEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 380 KYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 380 tYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
+|...++|+ |++|.|+ +.++...+...+.+||+.+++....
T Consensus 191 t~~~~~Dp~--G~iP~~l-n~~~~~~~~~~l~~LR~~~~~~~~~ 231 (237)
T 2pso_A 191 THICRIDLK--GHSPEWY-SKGFGHLCAAEVARIRNSFQPLIAE 231 (237)
T ss_dssp EEEEEECCS--SSCTTTT-TTHHHHHHHHHHHHHHHTTSCC---
T ss_pred EEEEEeCCC--CCchHHH-HHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999995 7899999 9999999999999999998876544
No 30
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=98.93 E-value=6.6e-08 Score=94.90 Aligned_cols=142 Identities=14% Similarity=0.203 Sum_probs=102.4
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
.......|+||++.||+++.|+.+...|.|.++++++++.+++ .++.+.-. .+.-.-.... .++..+...+.++|
T Consensus 36 ~~~~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGdg~vGsVR~~t~~-~G~p~~~vkE--rL~~iD~~~~~~sY 112 (190)
T 3kl1_A 36 TSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTVI-SGLPASTSTE--RLEFVDDDHRVLSF 112 (190)
T ss_dssp EEEEEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESSSSTTCEEEEEEC-SSSSCEEEEE--EEEEEETTTTEEEE
T ss_pred eEEEEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcCCCCCCeEEEEEec-CCCccceEEE--EEEEEeccCCEEEE
Confidence 3444558999999999999999998889999999999876542 34443322 2211011222 33444556699999
Q ss_pred EEEecCC--ceeEEEEEEEEc-----CCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 354 EQVEGDF--DSFQGKWLFEQL-----GSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 354 r~VeGdF--r~f~G~WtLepl-----gdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
+.++|++ +.+.+.-.+.+. ++++|.|+|+..|+|.. + ....-+..++..-+...|++|++.+|+...
T Consensus 113 ~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~-g-~~~e~~~~~~~~~~~~gL~~L~~~~e~~~~ 186 (190)
T 3kl1_A 113 RVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPE-G-NTEEDTKMFVDTVVKLNLQKLGVAATSAPM 186 (190)
T ss_dssp EEEEESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECCT-T-CCHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEEecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEEcCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999975 578888888773 56689999999999642 2 223345777777889999999999998744
No 31
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=98.92 E-value=5.6e-08 Score=93.62 Aligned_cols=143 Identities=9% Similarity=0.106 Sum_probs=102.1
Q ss_pred CeeEEEEEEEEEcCCHHHHHHHH-hccCc-ccccCcC-CcEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeee
Q 006041 272 GVHRCVVASITVKAPVSEVWNVM-TAYET-LPEIVPN-LAISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQ 346 (663)
Q Consensus 272 g~~r~VrasIvI~APpeqVWaVL-TDyEn-yPeWiP~-V~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~ 346 (663)
++...+..++.|+|||++||+++ .|+.+ +|.|+|. ++++++++.+++ .++.+.-. ...-+ ... +++..+.
T Consensus 6 mg~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g~~~~--~kE--rl~~iD~ 80 (168)
T 3rws_A 6 MGVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV-GDFGS--TKQ--HIDMVDR 80 (168)
T ss_dssp CCEEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSSTTCEEEEEES-SSSCE--EEE--EEEEEET
T ss_pred cceEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCCCCeEEEEEEc-CCCeE--EEE--EEEEEcc
Confidence 45677999999999999999996 99999 7999996 788898887643 34443322 21111 122 2344445
Q ss_pred CCCeEEEEEEecC------CceeEEEEEEEEcCCCeEEEEEEEEEEeccC-ccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 347 HEQEISFEQVEGD------FDSFQGKWLFEQLGSHHTLLKYSVESKMQKN-SLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 347 pprrIsfr~VeGd------Fr~f~G~WtLeplgdGgTrVtYtve~eP~~g-g~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
..+.++|+.++|+ +..+..++++.+.++|+|.++++..+++.++ ..+++.-+ +...+....+++++.+.+-+
T Consensus 81 ~~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~d~~~~~e~~-k~~~~~~~~~~k~ie~ylla 159 (168)
T 3rws_A 81 ENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYTKGDDIELSKDYL-EAGIERFEGFTKAVESFLLA 159 (168)
T ss_dssp TTTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTSCEEEEEEEEEEECSSSCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEEccCcccCcCceEEEEEEEEEECCCCceEEEEEEEEEECCCccCCCHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 6799999999986 5578999999998888899999999998754 33433222 33455566778888777755
Q ss_pred h
Q 006041 420 R 420 (663)
Q Consensus 420 r 420 (663)
.
T Consensus 160 n 160 (168)
T 3rws_A 160 N 160 (168)
T ss_dssp C
T ss_pred C
Confidence 4
No 32
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=98.92 E-value=1.8e-08 Score=95.18 Aligned_cols=137 Identities=10% Similarity=0.266 Sum_probs=92.9
Q ss_pred EEEEEEEEEcCCHHHHHHH-HhccCcc-cccCcCC-cEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 275 RCVVASITVKAPVSEVWNV-MTAYETL-PEIVPNL-AISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaV-LTDyEny-PeWiP~V-~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
..+..++.|+||+++||++ +.|+.++ |.|+|.+ +++++++.+++ .++.+.-. .+...-.... +++..+...+
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~-~g~~~~~~kE--rl~~iD~~~~ 79 (155)
T 2flh_A 3 KEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFL-PEVSPSYQRE--EITEFDESSH 79 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSSTTCEEEEEEC-TTSSSCEEEE--EEEEEETTTT
T ss_pred cEEEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCCCCeEEEEEee-CCCCCcEEEE--EEEEEeCCCC
Confidence 4588999999999999999 7999999 9999976 66688876542 24433222 2200001122 2344445679
Q ss_pred eEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHH--hhHHHHHHHHHHHHH
Q 006041 350 EISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIY--EDLPSNLCAIRDYVE 418 (663)
Q Consensus 350 rIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vr--e~L~~~L~ALR~RAE 418 (663)
.+.|+.++|+ ++.+.++++|.|.++|+|.++++..+++..+ ..|. + .... +.+..++++|.+++.
T Consensus 80 ~~~y~iieg~~l~~~~~~~~~~i~v~p~~~ggs~v~wt~~y~~~~~-~~~~-~--~~~~~~~~~~~~~k~ie~yll 151 (155)
T 2flh_A 80 EIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKISYDHDSD-IEEK-V--TPTKTSQSTLMYLRRLERYLS 151 (155)
T ss_dssp EEEEEEEEEGGGGTTCSEEEEEEEEEEEETTEEEEEEEEEEEC---------C--CHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEeccccccCceEEEEEEEEEECCCCCEEEEEEEEEEECCC-CccC-h--hHhhhHHHHHHHHHHHHHHHh
Confidence 9999999986 5689999999998888899999999998632 2221 1 1223 456667777776653
No 33
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=98.90 E-value=5.3e-08 Score=97.00 Aligned_cols=141 Identities=12% Similarity=0.139 Sum_probs=95.9
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecC---CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSREN---NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g---n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
......+|+||+++||+++.||.+++.|.|.+++|++++.++ +.+|.+... .+.-.-.... .|+..+...+.++
T Consensus 55 ~~~v~~~I~ApadkVW~lv~Df~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~-~G~p~~~vkE--rL~~lDde~~~~s 131 (208)
T 3jrs_A 55 SSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVI-SGLPANTSRE--RLDLLDDDRRVTG 131 (208)
T ss_dssp EEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCCCSTTCEEEEEEC-TTSSCCEEEE--EEEEEETTTTEEE
T ss_pred eEEEEEEEeCCHHHHHHHHhCcCChhHccccceEEEEecCCCCCCCeEEEEEec-CCCccceEEE--EEEEEeccCCEEE
Confidence 455566899999999999999999999999999999886542 234433321 2211001122 2344445568999
Q ss_pred EEEEecC--CceeEEEEEEEEcC-CCeEEEEEEEEEE-----eccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 353 FEQVEGD--FDSFQGKWLFEQLG-SHHTLLKYSVESK-----MQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 353 fr~VeGd--Fr~f~G~WtLeplg-dGgTrVtYtve~e-----P~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
|+.++|+ ++.+.+..+|.|.+ +++|.|+|+..|+ |.. + ....-+..++..-+...|++|++.+|+..
T Consensus 132 YsIieG~lpv~~Y~sti~V~p~~~g~~t~V~Wt~~fes~~~D~p~-g-~~~e~a~~~~~~vy~~gL~~L~~~~e~~~ 206 (208)
T 3jrs_A 132 FSITGGEHRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPE-G-NSEEDTRLFADTVIRLNLQKLASITEAMN 206 (208)
T ss_dssp EEEEESSSSCTTCEEEEEEEEEEC-----CEEEEEEEEEEEECCT-T-SCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeeCCcceeeEEEEEEEEEccCCCccEEEEEEEEEEccCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999986 56889999999963 4589999999887 211 2 22233466667677899999999999863
No 34
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=98.89 E-value=6.6e-08 Score=91.99 Aligned_cols=140 Identities=10% Similarity=0.154 Sum_probs=96.9
Q ss_pred EEEEEEEEcCCHHHHHHHH-hccCc-ccccCcC-CcEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 276 CVVASITVKAPVSEVWNVM-TAYET-LPEIVPN-LAISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVL-TDyEn-yPeWiP~-V~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
.+..++.|+|||++||+++ .|+.+ .|.|+|. ++++++++.+++ .++.+.-...+-. -.... +++..+...+.
T Consensus 4 ~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g~~~-~~~kE--rl~~iD~~~~~ 80 (159)
T 4a8u_A 4 NYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPF-KYVKD--RVDEVDHTNFK 80 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSSTTCEEEEECCTTSSC-SEEEE--EEEEEETTTTE
T ss_pred EEEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCCCceEEEEEEecCCCc-cEEEE--EEEEEccccCE
Confidence 4788999999999999999 99999 6999996 688899887643 3444332222111 01122 23444456799
Q ss_pred EEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 351 ISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 351 Isfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
++|+.++|+ +..+..++++.|.++|+|.++++..+++.++...++--+ +...+.+..+++++.+.+-+
T Consensus 81 ~~y~iiegd~l~~~~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~~~~~~~~~-k~~~~~~~~~~k~ie~yll~ 153 (159)
T 4a8u_A 81 YSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQI-KASKEMGETLLRAVESYLLA 153 (159)
T ss_dssp EEEEEEEETTCBTTEEEEEEEEEEEECTTSCEEEEEEEEEEESSSCCC-CHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCccceEEEEEEEEEEECCCCceEEEEEEEEEECCCCcCCHHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 999999987 458899999999888889999999999864432222111 22344455677777776654
No 35
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=98.89 E-value=2e-08 Score=95.39 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=82.6
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCC--CeEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHE--QEISF 353 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pp--rrIsf 353 (663)
.++.+|+|++|+++||++++|+++||+|+++++++ +..+++..... .+--+. ...+ +....+ -...|
T Consensus 28 ~~~~si~I~ap~eeVy~~~~D~e~lP~W~~~l~~~--~~~~~~~w~a~-~~p~G~----v~v~----~~~~~~~gv~d~~ 96 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGG--LEADGEDWIAK-GGPLGE----VRVN----FAPHNEFGVIDHV 96 (156)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTC--CEEETTEEEEE-CSSSCE----EEEE----ECCCCSSCBCCEE
T ss_pred ceEEEEEEcCCHHHHHHHHHChhhHHHHHHhhhhh--cccCCCcEEEe-ccCCCc----EEEE----EecCCCceEEEEE
Confidence 47899999999999999999999999999999986 44455543222 121121 1121 221111 12344
Q ss_pred EEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 354 EQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 354 r~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
....+.. ...+.|++.+.++ +|+|+|++...| +.+.+.+ +.-...+...|++||+++|.
T Consensus 97 ~~l~~g~-~~~~~~rv~p~g~-GTeV~~tl~~~p--g~~~~~~---~~~~~~v~~dL~~LK~l~E~ 155 (156)
T 2qpv_A 97 VTLPDGL-KVYNALRVTPNGS-GTEVSFTLLRLE--GMTDEDF---EQDASAITADLEMLKSLLEA 155 (156)
T ss_dssp EECTTSC-EEEEEEEEEEETT-EEEEEEEEECCT--TCCHHHH---HHHHHHHHHHHHHHHHHHHC
T ss_pred EecCCCc-EEEEEEEEEeCCC-CEEEEEEEecCC--CCChhhh---hhhHHHHHHHHHHHHHHHhC
Confidence 4433222 3567899999876 599999996544 3333332 44445789999999999984
No 36
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=98.88 E-value=5.7e-08 Score=92.07 Aligned_cols=138 Identities=12% Similarity=0.187 Sum_probs=95.2
Q ss_pred EEEEEEEEEcCCHHHHHHH-HhccCcc-cccCcC-CcEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 275 RCVVASITVKAPVSEVWNV-MTAYETL-PEIVPN-LAISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaV-LTDyEny-PeWiP~-V~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
..+..++.|+|||++||++ +.|+.++ |.|+|. ++++++ +.+++ .++.+.-...+-. -.... +++..+...+
T Consensus 4 ~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~~~-~~~kE--rl~~iD~~~~ 79 (154)
T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGSPI-TTMTV--RTDAVNKEAL 79 (154)
T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTCSC-CEEEE--EEEEEETTTT
T ss_pred eEEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCCCceEEEEEecCCCCc-eEEEE--EEEEEeccCC
Confidence 3578899999999999999 9999999 999996 788888 76542 3444332222211 01122 2344445679
Q ss_pred eEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHH
Q 006041 350 EISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYV 417 (663)
Q Consensus 350 rIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RA 417 (663)
.++|+.++|+ +..+..++++.|.++|+|.++++..+++.++..+++--+ +...+....+++++.+++
T Consensus 80 ~~~y~iiegd~l~~~~~~~~~ti~v~p~~~ggs~v~wt~~y~~~~~~~~~~~~~-~~~~~~~~~~~k~ie~yl 151 (154)
T 2vjg_A 80 SYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAVVPEENI-KFADAQNTALFKAIEAYL 151 (154)
T ss_dssp EEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCCCCHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCccceEEEEEEEEEEECCCCcEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9999999987 468999999999877789999999999865433333222 223344455666666554
No 37
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=98.85 E-value=4.3e-08 Score=97.83 Aligned_cols=142 Identities=11% Similarity=0.132 Sum_probs=98.5
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecC---CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSREN---NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g---n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
......+|+||+++||+++.||.+++.|.|.+++|++.+.++ +.+|..... .++-.-.... .|+..++..+.++
T Consensus 51 ~~~v~~~I~ApadkVW~lv~dF~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~-~G~p~~~vkE--rL~~lDd~~~~~s 127 (211)
T 3k3k_A 51 SSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVI-SGLPANTSTE--RLDILDDERRVTG 127 (211)
T ss_dssp EEEEEEEESSCHHHHHHHHTCTTCGGGTCSSEEEEECCTTCCCCTTCEEEEEES-SSSSCEEEEE--EEEEEETTTTEEE
T ss_pred eEEEEEEEcCCHHHHHHHHhCcCChhHcCccceEEEEecCCCCCCCcEEEEEec-CCCccceEEE--EEEEEeccCCEEE
Confidence 455566899999999999999999999999999999886543 334443322 2211011122 2344445668999
Q ss_pred EEEEecC--CceeEEEEEEEEcCCCeEEEEEEEEEEe-----ccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCCC
Q 006041 353 FEQVEGD--FDSFQGKWLFEQLGSHHTLLKYSVESKM-----QKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGDN 424 (663)
Q Consensus 353 fr~VeGd--Fr~f~G~WtLeplgdGgTrVtYtve~eP-----~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~~ 424 (663)
|+.++|+ ++.|.+.++|.|.++|+ |+|+..|+. +. +.- ..-+..++..-+...|++|++.+|+.....
T Consensus 128 YsIieg~lpv~~Y~sti~V~p~~~gg--V~Wt~~fes~~~D~P~-g~~-~e~a~~~v~~iy~~gL~~L~~~~e~~~~~~ 202 (211)
T 3k3k_A 128 FSIIGGEHRLTNYKSVTTVHRFEKEN--RIWTVVLESYVVDMPE-GNS-EDDTRMFADTVVKLNLQKLATVAEAMARNS 202 (211)
T ss_dssp EEEEEETTGGGTCEEEEEEEEEEETT--EEEEEEEEEEEEECCS-SSS-SSCCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEeecCcceeEEEEEEEEEECCCCC--EEEEEEEEEecCCCCC-CCC-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999986 56899999999987765 899888872 11 111 112244555566789999999999886653
No 38
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=98.78 E-value=2.4e-07 Score=87.73 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=90.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCC----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNL----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
..++.++.|+||+++||++|+|.+.+++|++.- ..+.+-.+.|+..++...+..+.. +.+... ++++ .++++
T Consensus 22 ~~i~~~r~i~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~~~-v~e~--~p~~r 97 (178)
T 1xuv_A 22 QEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYIQKDPEGNE-YAFHGV-NHDV--TEPER 97 (178)
T ss_dssp SEEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEEEEEEECTTSCE-EEEEEE-EEEE--ETTTE
T ss_pred cEEEEEEEECCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEecccCCEEEEEEECCCCCE-EEEEEE-EEEE--eCCCE
Confidence 458888899999999999999999999998642 122333345665544443323321 222322 2232 47899
Q ss_pred EEEEEEecC----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 351 ISFEQVEGD----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 351 Isfr~VeGd----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
|.|....+. .......|+|++.++++|+|++...+.+. . ....++...+..+...+|..|++.+|....
T Consensus 98 l~~~~~~~~~~~~~~~~~v~~~l~~~~~ggT~lt~~~~~~~~--~-~~~~~~~~~~~~Gw~~~L~~Lk~~le~~~~ 170 (178)
T 1xuv_A 98 IISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSVFQTI--E-DRDGMLQSGMEEGINDSYERLDELLEKMKK 170 (178)
T ss_dssp EEEEEEETTSSSSCCCEEEEEEEEEETTTEEEEEEEEECSSH--H-HHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCcEEEEEEEEEcCCCCEEEEEEEEeCCH--H-HHHHHHHHhHHHHHHHHHHHHHHHHHhccc
Confidence 999876422 12467889999987568999998875321 0 111122223457889999999999987543
No 39
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=98.76 E-value=7e-07 Score=83.25 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=92.6
Q ss_pred eeEEEEEEEEEcCCHHHHHHHHhccCcccccCcC----CcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCC
Q 006041 273 VHRCVVASITVKAPVSEVWNVMTAYETLPEIVPN----LAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHE 348 (663)
Q Consensus 273 ~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~----V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pp 348 (663)
....++.++.|+||+++||++++|.+.+++|++. +..+.+--+.|+..++...+..+.. +.+... ++++ .++
T Consensus 12 ~~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~~~-v~e~--~p~ 87 (171)
T 2il5_A 12 EHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKV-NVIEGI-YESL--VMD 87 (171)
T ss_dssp EEEEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEEEEEECGGGCE-EEEEEE-EEEE--ETT
T ss_pred CCceEEEEEEeCCCHHHHHHHHCCHHHHHhccCCCCccceEEEecccCCCEEEEEEECCCCCE-EEEEEE-EEEE--cCC
Confidence 3567999999999999999999999999999853 2223333345665545444333321 222222 2232 478
Q ss_pred CeEEEEEEecCC--ceeEEEEEEEEcCCCeEEEEEEEEEEeccC--ccchH-----HHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 349 QEISFEQVEGDF--DSFQGKWLFEQLGSHHTLLKYSVESKMQKN--SLLSE-----AIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 349 rrIsfr~VeGdF--r~f~G~WtLeplgdGgTrVtYtve~eP~~g--g~LP~-----~L~er~vre~L~~~L~ALR~RAEk 419 (663)
++|.|....+.. .....+|+|++.++|+|+|+++...-+..+ ..... ......+..+...+|..|++.+|+
T Consensus 88 ~rl~~~~~~~~~~~~~~~~~~~l~~~~~g~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le~ 167 (171)
T 2il5_A 88 EYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIET 167 (171)
T ss_dssp TEEEEEESCC--CCCCEEEEEEEEECSSSSEEEEEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEEecCCCCCcEEEEEEEEECCCCCEEEEEEEEeccCcccccccchhccchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999998764322 246788999998775799999886433100 00111 122335667888999999999987
Q ss_pred h
Q 006041 420 R 420 (663)
Q Consensus 420 r 420 (663)
.
T Consensus 168 ~ 168 (171)
T 2il5_A 168 S 168 (171)
T ss_dssp T
T ss_pred c
Confidence 5
No 40
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=98.75 E-value=5.6e-07 Score=80.22 Aligned_cols=132 Identities=11% Similarity=0.150 Sum_probs=87.4
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
..++.++.|+||+++||++|+|.+++++|+... .+..--+.|+..++.... .+. .+.+..++ +++ .++++|.|.
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~-~~~~~~~~G~~~~~~~~~-~g~-~~~~~~~v-~~~--~p~~~l~~~ 78 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEALVNPEIIKEYMFGT-TVVSDWKEGSQIVWKGEW-KGK-AYEDKGTI-LQF--NERSILQYS 78 (146)
T ss_dssp EEEEEEEEECSCHHHHHHHHSCTTHHHHHSSSC-EEECCCSTTCEEEEEEEE-TTE-EEEEEEEE-EEE--ETTTEEEEE
T ss_pred ceEEEEEEECCCHHHHHHHHcCHHHhceeEcCC-cceeccCCCCEEEEEecC-CCc-eecccEEE-EEE--cCCCEEEEE
Confidence 468999999999999999999999999997422 222222355554443221 121 12223321 222 478999988
Q ss_pred EEec--C-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 355 QVEG--D-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 355 ~VeG--d-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
...+ . .......|+|++.++ +|+|+++...-+. . .....+..+....|.+|++.+|..
T Consensus 79 ~~~~~~g~~~~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~~------~-~~~~~~~~gw~~~l~~Lk~~le~~ 143 (146)
T 2leq_A 79 HFSPLTGKPDLPENYHVVTITLTALKK-GVEVELTQDNNET------E-KEQKHSEDNWNTMLEGLKKFLENK 143 (146)
T ss_dssp CBCGGGCCCSCGGGSCEEEEEEEECSS-CEEEEEEEEEESS------H-HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EccCccCCCCCCCCceEEEEEEEEcCC-CeEEEEEEecCCc------h-hhHhhHHhhHHHHHHHHHHHHhcc
Confidence 6532 0 114678899999865 6999998764331 1 345567788899999999999864
No 41
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=98.74 E-value=5.8e-08 Score=96.17 Aligned_cols=151 Identities=13% Similarity=0.242 Sum_probs=101.9
Q ss_pred eccccccCCe-eEEEEEEEEEcCCHHHHHHHH-h-ccCcc-cccCcCC-cEEEEEeecCC--EEEEEEEeccceeEEEEE
Q 006041 264 FDGLLENGGV-HRCVVASITVKAPVSEVWNVM-T-AYETL-PEIVPNL-AISKILSRENN--KVRILQEGCKGLLYMVLH 336 (663)
Q Consensus 264 ~D~~~e~~g~-~r~VrasIvI~APpeqVWaVL-T-DyEny-PeWiP~V-~sSrVLer~gn--~vrv~q~g~~gll~~~~~ 336 (663)
.|+++.+... ...+..++.|+||+++||+++ . |+.++ |.|+|.+ ++++++ .+|+ .++.+.-. .+...-...
T Consensus 17 ~~~~~~~~~~~~g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg~GsIR~lt~~-~G~~~~~vk 94 (201)
T 2vq5_A 17 HQGIINQVSTVTKVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGGVGTILDMTFV-PGEFPHEYK 94 (201)
T ss_dssp --CTTGGGCCEEEEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSSTTCEEEEECC-TTCSSCEEE
T ss_pred hhhhhhCccccceEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCCCCeEEEEEec-CCCcccEEE
Confidence 3455555444 347899999999999999995 6 99998 9999975 777988 6542 24433222 221001122
Q ss_pred EEEEEEEeeeCCCeEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCc-cchHHHHHHHHHhhHHHHH
Q 006041 337 ARVVMDICEQHEQEISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNS-LLSEAIMEEVIYEDLPSNL 410 (663)
Q Consensus 337 ~rvVLDV~E~pprrIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg-~LP~~L~er~vre~L~~~L 410 (663)
.+ ++..++..+.++|+.++|+ ++.+..+.++.+.++|+|.++++.++++..+. ..|+.. ...+.+..++
T Consensus 95 Er--le~iDde~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dggs~vkWt~~ye~~~~~~~~~e~~---~~~~~~~~~~ 169 (201)
T 2vq5_A 95 EK--FILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYHVKPEFVKIVEPL---ITTGPLAAMA 169 (201)
T ss_dssp EE--EEEEETTTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGHHHHTTT---CCSHHHHHHH
T ss_pred EE--EEEEchhhCEEEEEEEecCccccceeEEEEEEEEEECCCCCeEEEEEEEEEECCCCCCCChhH---HHHHHHHHHH
Confidence 22 3444556799999999986 45788888999988888999999999986432 122222 3455667778
Q ss_pred HHHHHHHHhhh
Q 006041 411 CAIRDYVEKRE 421 (663)
Q Consensus 411 ~ALR~RAEkr~ 421 (663)
++|.+++.+..
T Consensus 170 KaiE~yLlanp 180 (201)
T 2vq5_A 170 DAISKLVLEHK 180 (201)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHhCc
Confidence 88877776543
No 42
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=98.68 E-value=2.1e-07 Score=89.33 Aligned_cols=143 Identities=10% Similarity=0.061 Sum_probs=97.4
Q ss_pred CeeEEEEEEEEEcCCHHHHHHH-HhccCcc-cccCcC-CcEEEEEeecCC--EEEEEEEeccceeEEEEEEEEEEEEeee
Q 006041 272 GVHRCVVASITVKAPVSEVWNV-MTAYETL-PEIVPN-LAISKILSRENN--KVRILQEGCKGLLYMVLHARVVMDICEQ 346 (663)
Q Consensus 272 g~~r~VrasIvI~APpeqVWaV-LTDyEny-PeWiP~-V~sSrVLer~gn--~vrv~q~g~~gll~~~~~~rvVLDV~E~ 346 (663)
++...+..++.|+|||++||++ +.|+.++ |.|+|. ++++++++.+++ .++.+.-...+-. -.... .++..+.
T Consensus 7 Mg~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg~~Gsir~~~~~~g~~~-~~~kE--rl~~iD~ 83 (165)
T 3ie5_A 7 MAAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHPL-TYMLH--KFDEIDA 83 (165)
T ss_dssp CSCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTTSSC-CEEEE--EEEEEEG
T ss_pred eeeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCCCCCeEEEEEecCCCCC-ceEEE--EEEEEch
Confidence 4456799999999999999999 5899998 999996 677788877542 3444332222211 11122 2344455
Q ss_pred CCCeEEEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 347 HEQEISFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 347 pprrIsfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
..+.++|+.++|+ ++.+..+.++. .++|+|.++++.++++.++..+++--+ +...+....+++++.+.+-+
T Consensus 84 ~~~~~~Y~iieG~~l~~~~~~y~~~i~v~-~~~ggs~vkwt~~y~~~~~~~~~~e~~-k~~~~~~~~~~K~ie~ylla 159 (165)
T 3ie5_A 84 ANFYCKYTLFEGDVLRDNIEKVVYEVKLE-AVGGGSKGKITVTYHPKPGCTVNEEEV-KIGEKKAYEFYKQVEEYLAA 159 (165)
T ss_dssp GGTEEEEEEEEEGGGTTTEEEEEEEEEEE-EETTEEEEEEEEEEEECTTCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred hcCEEEEEEecCCCCccceEEEEEEEEEE-eCCCceEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 6799999999987 55788888888 567789999999999875433333221 22344455667777766654
No 43
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=98.68 E-value=5.1e-10 Score=112.52 Aligned_cols=139 Identities=16% Similarity=0.243 Sum_probs=87.9
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecC---CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSREN---NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEIS 352 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~g---n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIs 352 (663)
....+.+|+||+++||+++.|+.+.+.|.|.++++++++.++ +.++.+... .+........+ ++..+...+.++
T Consensus 79 ~~~v~~~I~ApadkVW~lv~Df~~pk~w~p~I~s~el~eGdg~gvGSVR~lt~~-~G~p~~~vkEr--Le~iDde~~~~s 155 (223)
T 3qrz_A 79 CSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLREVMVV-SGLPAVSSTER--LEILDEERHVIS 155 (223)
T ss_dssp EECCCCCCSSCHHHHHHHHHCCSSGGGTCSSCCCCCCCC---CCSSCCCCCCC----CCCCCCCCC--CSEEETTTTEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCCCChhHcchhcCEEEEEcCCCCCCCeEEEEEec-CCCccceEEEE--EEEEeccCCEEE
Confidence 455555899999999999999999999999999999987654 223322111 11100011122 223334557899
Q ss_pred EEEEecCC--ceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 353 FEQVEGDF--DSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 353 fr~VeGdF--r~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
|+.++|++ +.+.+..+|.+.++|+|.|+++..|+|..+ ..+..+..++..-+...|++|++.+|+
T Consensus 156 YsIieG~~p~~~Y~stikV~p~~dGGT~V~Ws~~f~pp~g--~~~e~a~~~v~~~y~~gL~~Lk~~~E~ 222 (223)
T 3qrz_A 156 FSVVGGDHRLKNYRSVTTLHASDDEGTVVVESYIVDVPPG--NTEEETLSFVDTIVRCNLQSLARSTNR 222 (223)
T ss_dssp CCCTTCSSSCCCCCCEEEC--------CCEEEEEECSCSS--SCSTTHHHHHHHHHHHHHHHHHHTCC-
T ss_pred EEEEeCCCccccEEEEEEEEEcCCCCEEEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999975 588889999998777899999999996322 222345667777778899999988764
No 44
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=98.67 E-value=9.5e-07 Score=86.85 Aligned_cols=141 Identities=11% Similarity=0.163 Sum_probs=100.1
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEe-ecC------CEEEEEEEeccceeEEEEEEEEEEEEeee
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILS-REN------NKVRILQEGCKGLLYMVLHARVVMDICEQ 346 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLe-r~g------n~vrv~q~g~~gll~~~~~~rvVLDV~E~ 346 (663)
+=.-.....|+||+++||+++.||.+.+.|.|.++++++.+ .++ +.+|..... .++.+-.... .|+..++
T Consensus 29 ~c~s~~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s~~~~e~Gdg~~~~~vGsVR~ltl~-~G~P~~~i~E--rL~~lDd 105 (189)
T 3oji_A 29 TCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVV-SGLPASTSVE--ILEVLDE 105 (189)
T ss_dssp EEEEEEEEEESSCHHHHHHHHSCTTCGGGTCTTEEEEEECCC----CCCSTTCEEEEEEC-SSSSBSEEEE--EEEEEET
T ss_pred ccceeEEEEEcCCHHHHHHHHhCCCChhhCccccceEEEEecCCCCccCCCCcEEEEEec-CCCcCceEEE--EEEEEec
Confidence 44566677899999999999999999999999999999986 543 234433221 2211001122 3555666
Q ss_pred CCCeEEEEEEecCC--ceeEEEEEEEEcC---C-----CeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHH
Q 006041 347 HEQEISFEQVEGDF--DSFQGKWLFEQLG---S-----HHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDY 416 (663)
Q Consensus 347 pprrIsfr~VeGdF--r~f~G~WtLeplg---d-----GgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~R 416 (663)
..+.++|++++|++ +.+...-++.+.+ + +.|.+.+...+++.. + .-.-.+..++..-+...|++|++.
T Consensus 106 e~~~~sY~Iieg~~pv~nY~StitV~~~~~~~~G~~~~~~T~v~es~~~D~P~-g-~t~e~~~~~v~~v~~~gL~~L~~~ 183 (189)
T 3oji_A 106 EKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQ-G-NTEEDTRMFVDTVVKSNLQNLAVI 183 (189)
T ss_dssp TTTEEEEEEEECSBSSCSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCT-T-SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEEecCCccccEEEEEEEEeccccCCCccccCcEEEEEeEecCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77999999999874 5888888888752 2 368888888888642 2 334456777888888999999999
Q ss_pred HHh
Q 006041 417 VEK 419 (663)
Q Consensus 417 AEk 419 (663)
+|+
T Consensus 184 ~e~ 186 (189)
T 3oji_A 184 STA 186 (189)
T ss_dssp HHC
T ss_pred hhc
Confidence 986
No 45
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=98.67 E-value=6.6e-08 Score=84.88 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=70.2
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
.++.++.|+||++.||++|+|++++++++|.+..
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~g 82 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPEG 82 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHhChhhhhhhcccccEEEEEEeCCCccEEEEEEEeCCceEEEEEEEEEcCCCcEEEEEeccC
Confidence 5789999999999999999999999999998865
Q ss_pred -------------cCCceEEEEEEEEecCCCCCHHHHH----HHHhhchHHHHHHHHHHHHHh
Q 006041 129 -------------RSSTTTLSYEVNVIPRLNFPAIFLE----RIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 -------------~~~gT~LtY~v~V~P~f~vP~~lie----~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.++||.++|+++..|..++|..++. ..+++.+...|.+++++||+.
T Consensus 83 ~~~~~~~~~~~~~~~~gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~~ 145 (147)
T 2d4r_A 83 DFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAA 145 (147)
T ss_dssp SCSEEEEEEEEEECSSSEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhheEEEEEEEECCCCcEEEEEEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2466999999999999888876666 666699999999999999973
No 46
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=98.66 E-value=5.6e-07 Score=81.77 Aligned_cols=131 Identities=16% Similarity=0.161 Sum_probs=86.5
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCccccc-CcC--C--cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEI-VPN--L--AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeW-iP~--V--~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
|.++.++.|+||+++||++|+|.+++++| ++. + ..+.+-.+.|+..++...+..+-....+..+ ++++ .+++
T Consensus 1 m~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~~~~~~~~-v~~~--~p~~ 77 (142)
T 2lcg_A 1 MNITVETTVAAPVGKVWRAYTTPEDIKQWNAASDDWHTTAATVDLREGGAFSSRMEAKDGSMGFDFAGT-YTKV--VENK 77 (142)
T ss_dssp CEEEEEEEESSCHHHHHHHTTCHHHHHHHCCSSTTEEEEEEEECCSTTCEEEEEEEETTSSCEEEEEEE-EEEE--ETTT
T ss_pred CeEEEEEEeCCCHHHHHHHhCCHHHHhcCCCCCCCccceeeEEccccCCEEEEEEEcCCCCceeeeEEE-EEEE--cCCC
Confidence 35788999999999999999999999999 653 1 1222223455555544443222101223332 2222 4789
Q ss_pred eEEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 350 EISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 350 rIsfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
+|.|.. .| ....|+|++.++ +|+|+++..... ... ...+..+....|..|++.++....
T Consensus 78 ~l~~~~-~g----~~~~~~l~~~~~-gT~l~~~~~~~~---~~~-----~~~~~~Gw~~~L~~L~~~le~~~~ 136 (142)
T 2lcg_A 78 RIEYAF-GD----RTAKVEFLEAPQ-GVTVRVSFVAET---EYP-----VEQQQQGWQAILNNFKRHVESHLE 136 (142)
T ss_dssp EEEEEE-TT----EEEEEEEEEETT-EEEEEEEEECCS---SSC-----HHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEEEEc-CC----CEEEEEEEEcCC-CEEEEEEEecCC---HHH-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999986 23 678899999875 799999866521 111 123567888899999999987543
No 47
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=98.66 E-value=3.5e-07 Score=82.00 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=86.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCc----EEEEEeecCCEEEEEEE-eccceeEEEEEEEEEEEEeeeCCCe
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLA----ISKILSRENNKVRILQE-GCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~----sSrVLer~gn~vrv~q~-g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
.++.++.|+||+++||++|+|.+++++|++.-. .+.+-.+.|+..++... +..+.. ..+..+ ++++ .++++
T Consensus 4 ~~~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~~-~~~~~~-v~~~--~p~~~ 79 (147)
T 1z94_A 4 TIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQK-HAFGGR-YLEL--VPGER 79 (147)
T ss_dssp CEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCE-EEEEEE-EEEE--ETTTE
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhhccCCCCEeeeEEEEccCCCcEEEEEEEECCCCCE-EEEEEE-EEEE--cCCCE
Confidence 367788999999999999999999999997521 12222335555444333 122211 223332 2222 47899
Q ss_pred EEEEEEec--CCc-eeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 351 ISFEQVEG--DFD-SFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 351 Isfr~VeG--dFr-~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
|.|....+ ++. .....|+|++.++ +|+|+++....+. . .....+..+....|.+|++.+|+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~~--~-----~~~~~~~~gw~~~L~~L~~~le~ 143 (147)
T 1z94_A 80 IRYTDRFDDAGLPGDMITTITLAPLSC-GADLSIVQEGIPD--A-----IPPENCYLGWQQSLKQLAALVEP 143 (147)
T ss_dssp EEEEEEESCCC---CEEEEEEEEEETT-EEEEEEEEECCCT--T-----SCHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEEEeCCCCCCcEEEEEEEEecCC-CEEEEEEEEcCCc--h-----hhHHHHHHHHHHHHHHHHHHHHh
Confidence 99987653 222 4678899999865 7999998876442 1 11244567888999999999875
No 48
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=98.63 E-value=9.6e-07 Score=80.96 Aligned_cols=130 Identities=10% Similarity=0.067 Sum_probs=87.2
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCccccc-CcC----CcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEI-VPN----LAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeW-iP~----V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
|.+..++.|+||+++||++++|.+.+++| ++. +..+++--+.|+..++...+..+...+.+... ++++ .+++
T Consensus 1 m~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~g~-v~e~--~p~~ 77 (144)
T 2lgh_A 1 MKISIEAHIEQEIEAVWWAWNDPDCIARWNAASSDWHTTGSRVDLVVGGRFCHHMAAKDGSAGFDFTGT-FTRV--EAPT 77 (144)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCHHHHTTSSSCSTTEEEEEEEECCSTTCEEEEEEEETTSSCEEEEEEE-EEEE--ETTT
T ss_pred CEEEEEEEeCCCHHHHHHHhCCHHHHhccCCCCCCcccceEEECCCCCCEEEEEEECCCCCceEEeEEE-EEEE--eCCC
Confidence 35788999999999999999999999999 653 12233333456665554443333211223333 2233 4789
Q ss_pred eEEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 350 EISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 350 rIsfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
+|.|... | .....|+|++.++ +|+|++.... +. . .. ......+....|..|++.+|..
T Consensus 78 ~l~~~~~-~---~~~~~~~l~~~~~-gT~l~~~~~~-~~--~-~~----~~~~~~Gw~~~L~~L~~~le~~ 135 (144)
T 2lgh_A 78 RLSFVMD-D---GREVDVQFASEPG-GTWVQETFDA-ET--S-HT----PAQQQAGWQGILDNFKRYVEAA 135 (144)
T ss_dssp EEEEEET-T---CCEEEEEEEEETT-EEEEEEEEEC-CT--T-SC----HHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEec-C---CcEEEEEEEEcCC-CEEEEEEEEC-CC--H-HH----HHHHHHHHHHHHHHHHHHHhhC
Confidence 9999853 3 3578899999864 7999998765 21 1 11 1235668888999999999874
No 49
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=98.61 E-value=1.9e-06 Score=80.71 Aligned_cols=141 Identities=12% Similarity=0.069 Sum_probs=91.1
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCC----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNL----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
...+..++.|+||+++||++++|.+.+++|++.- ..++.--+.|+..++...+.++.. +....+ ++++ .+++
T Consensus 11 ~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~-~~~~~~-v~e~--~p~~ 86 (172)
T 2ldk_A 11 ALSFSIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEFTVGGKAAYYMTGPDGTK-ARGWWQ-FTTI--EAPD 86 (172)
T ss_dssp TTEEEEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECCSTTCEEEEEEECTTSCE-EEEEEE-EEEE--CSSS
T ss_pred CceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEeecCCCEEEEEEECCCCCE-EeeEEE-EEEE--cCCC
Confidence 3458899999999999999999999999997531 223333345665554444333322 112222 2232 4789
Q ss_pred eEEEEEEecC--------CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 350 EISFEQVEGD--------FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 350 rIsfr~VeGd--------Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+|.|....++ +......|+|++.++ +|+|++...+.+. ..-..++...+..+....|..|++.+|...
T Consensus 87 rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~~-gT~lt~~~~~~~~---~~~~~~~~~~~~~Gw~~~L~~L~~~le~~~ 162 (172)
T 2ldk_A 87 HLEFDDGFADEHGAPVDELGVTHATVKLEPLEN-RTRMTIISTFESE---EQMQKMAEMGMEEGMREAIEQIDAVLSEPA 162 (172)
T ss_dssp EEEEEEEEBCSSCCBCTTTCEEEEEEEEEEETT-EEEEEEEEEESCH---HHHHHHHHHTHHHHHHHHHHHHHHHHTCCS
T ss_pred EEEEEEeecCCCCCccCCCccEEEEEEEEEcCC-CEEEEEEEEcCCH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHhH
Confidence 9999875422 124677889999865 7999998875421 011122233457788999999999988644
Q ss_pred C
Q 006041 422 G 422 (663)
Q Consensus 422 a 422 (663)
.
T Consensus 163 ~ 163 (172)
T 2ldk_A 163 N 163 (172)
T ss_dssp S
T ss_pred H
Confidence 3
No 50
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=98.59 E-value=6.8e-07 Score=80.51 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=84.3
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
|+|..++.|+|||++||++++|.+++++|++. .+..--+.|+...+...+.. .....+ ++++ .++++|.|+
T Consensus 1 M~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~--~~~~~~~~Gg~~~~~~~~~~----~~~~~~-v~~~--~p~~~l~~~ 71 (135)
T 3q6a_A 1 MDIITKMQVDVPRETVFEAFVDPEKIGGFWFS--SSSERWEQGKTITLRYEEYD----AELNIN-IERV--EDNQLIAFT 71 (135)
T ss_dssp CCEEEEEEESSCHHHHHHHHHCTTTGGGTSSS--EESSCCCTTCEEEEECGGGT----C-CEEE-EEEE--ETTTEEEEE
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHhcccCCC--CCcccccCCCEEEEEEcCcC----ceEEEE-EEEE--cCCCEEEEE
Confidence 35889999999999999999999999999764 22222234555443322211 111212 1222 478999998
Q ss_pred EEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 355 QVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 355 ~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
...| ...|+|++.+ ++|+|+++...-+. . ... .......+...+|..|++.+|...
T Consensus 72 ~~~g-----~~~~~l~~~~-~gT~l~~~~~~~~~--~-~~~--~~~~~~~GW~~~l~~L~~~le~g~ 127 (135)
T 3q6a_A 72 WGAH-----PITIQFEESE-AGTVVTTTEKDFDT--Q-DVK--QLLGQKEGWVYMLSCLKVYLEHGV 127 (135)
T ss_dssp ETTE-----EEEEEEEEET-TEEEEEEEECCCCS--S-CHH--HHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EcCC-----eEEEEEEECC-CCEEEEEEEcCCCc--c-hHH--HHhhchhCHHHHHHHHHHHHhcCc
Confidence 7642 7789999976 57999998663221 1 111 124567788899999999999754
No 51
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=98.58 E-value=1.2e-07 Score=86.59 Aligned_cols=82 Identities=13% Similarity=0.230 Sum_probs=75.3
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
.++.++.|++|+++||++++|+++|++|+|.+.+
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~ 82 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVRRDKDARSIDVS 82 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSSCCEEEEEEEEETTTCEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHHHHhhHHhhCCCcCeeEEEEecCCCCCceEEEEEEEEecceeEEEEEEEEEcCCCcEEEEE
Confidence 5889999999999999999999999999999875
Q ss_pred -----------------cCCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHhcc
Q 006041 129 -----------------RSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERSFG 176 (663)
Q Consensus 129 -----------------~~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~~~ 176 (663)
.++||.|+|+++..+.-.++..++..++.+.+..++.++++||+++++
T Consensus 83 ~~~G~f~~~~g~w~f~~~~~gt~v~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~f~~r~~~~~~ 147 (148)
T 1t17_A 83 LLYGPFKRLNNGWRFMPEGDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHG 147 (148)
T ss_dssp ESSTTSSCEEEEEEEEEETTEEEEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCChhccEEEEEEEECCCCeEEEEEEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 245699999999999988889999999999999999999999998764
No 52
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=98.57 E-value=1.2e-06 Score=82.68 Aligned_cols=139 Identities=10% Similarity=0.070 Sum_probs=87.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcC--Cc--EEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPN--LA--ISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~--V~--sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
+.++.++.|+||+++||++|+|.+.+++|++. +. .+.+-.+.|+..++...+..+.. +.+..+ ++++ .++++
T Consensus 10 ~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~~~-v~e~--~p~~r 85 (178)
T 1xfs_A 10 LDLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGEFYTVMQDPEGNK-FPNSGC-FLEV--TDEKR 85 (178)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCEEEEEEECTTCCE-EEEEEE-EEEE--ETTTE
T ss_pred ceEEEEEEecCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEeeECCcEEEEEEECCCCCE-EEEEEE-EEEE--eCCCE
Confidence 45788889999999999999999999999764 21 22333345665555443323321 222222 2232 47899
Q ss_pred EEEEEEec----CCc------------eeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHH
Q 006041 351 ISFEQVEG----DFD------------SFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIR 414 (663)
Q Consensus 351 Isfr~VeG----dFr------------~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR 414 (663)
|.|...-+ +.. .....|+|++.++ +|+|++...+.+ ......++...+..+....|..|+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~---~~~~~~~~~~~~~~Gw~~~l~~L~ 161 (178)
T 1xfs_A 86 LIWTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTSS-GTRYTACAMHNT---PGQRKLHEEMGFHEGWGTTITQLE 161 (178)
T ss_dssp EEEESSEEGGGEECCC-----------CCEEEEEEEECSS-SEEEEEEEECSS---HHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCccccccccccccccccEEEEEEEEECCC-CEEEEEEEEcCC---HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99886421 111 3577899999875 699999887531 101111111124678899999999
Q ss_pred HHHHhhh
Q 006041 415 DYVEKRE 421 (663)
Q Consensus 415 ~RAEkr~ 421 (663)
+.+|...
T Consensus 162 ~~le~~~ 168 (178)
T 1xfs_A 162 ELLKQEK 168 (178)
T ss_dssp HHHHHHS
T ss_pred HHHHhhh
Confidence 9998763
No 53
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=98.56 E-value=2.6e-06 Score=80.58 Aligned_cols=140 Identities=12% Similarity=0.050 Sum_probs=91.6
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcC--C--cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEee-eCC
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPN--L--AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICE-QHE 348 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~--V--~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E-~pp 348 (663)
...+..++.|+||+++||++++|.+.+++|++. + ..+++--+.|+..++...+.++.. +.+... +.+ .++
T Consensus 15 ~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~g~----v~e~~p~ 89 (175)
T 2lf2_A 15 NKTITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDFKEGGTWLYAMVGPNGEE-HWSICE----YAIIKPI 89 (175)
T ss_dssp TTEEEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECCSTTCEEEEEEECSSSCE-EEEEEE----ECCCCSS
T ss_pred CceEEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEeccCCCEEEEEEECCCCCE-EEeEEE----EEEEcCC
Confidence 345889999999999999999999999999753 1 223333346666555444433322 112222 233 477
Q ss_pred CeEEEEEEecC--------CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 349 QEISFEQVEGD--------FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 349 rrIsfr~VeGd--------Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
++|.|....++ +.....+|+|++.++ +|+|++...+.+. -.-..++...+..+....|..|++.+|..
T Consensus 90 ~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~-gT~l~~~~~~~~~---~~~~~~~~~~~~~Gw~~~L~~L~~~le~~ 165 (175)
T 2lf2_A 90 ERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKGE-ITEVQYHISYDDV---AQLEATIQMGFKEGITMAMENLDELLVSG 165 (175)
T ss_dssp SEEEEEEEEESSTTCCCTTSCCEEEEEEEEEETT-EEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCCCcCCCCCcEEEEEEEEECCC-CEEEEEEEecCCH---HHHHHHHHHhHHHHHHHHHHHHHHHHHhC
Confidence 99999865321 124678889999864 7999998775321 01112233346788999999999999876
Q ss_pred hC
Q 006041 421 EG 422 (663)
Q Consensus 421 ~a 422 (663)
..
T Consensus 166 ~~ 167 (175)
T 2lf2_A 166 KK 167 (175)
T ss_dssp HS
T ss_pred ch
Confidence 54
No 54
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=98.53 E-value=1.9e-06 Score=79.04 Aligned_cols=130 Identities=12% Similarity=0.148 Sum_probs=86.5
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCccccc-CcC----CcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEI-VPN----LAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeW-iP~----V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
.+..++.|+||+++||++++|.+.+++| ++. +..+.+-.+.|+..++...+..+...+.+... ++++ .++++
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~g~-v~e~--~p~~~ 79 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAHIMKWCQASPEWHVPAAQNDLKAGGTFTTTMAAKDGSMSFDFGGV-YDQV--KTNDL 79 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHHHHHHSTTCTTCEEEEEECCCSTTCEEEEEEECTTSSCEEEEEEE-EEEE--ETTTE
T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHhhccCCCCCcccceeEEccCCCCEEEEEEECCCCCceeeeeEE-EEEE--eCCCE
Confidence 3778899999999999999999999999 653 12233333456665554443333211223332 2233 47899
Q ss_pred EEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 351 ISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 351 Isfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
|.|... | .....|+|++.++ +|+|++.... +. ... ...+..+....|..|++.+|...
T Consensus 80 l~~~~~-g---~~~v~~~l~~~~~-gT~l~~~~~~-~~--~~~-----~~~~~~Gw~~~L~~L~~~le~~~ 137 (144)
T 2l8o_A 80 IEYTIG-D---GRKVRIVFTHTGD-TTNIVESFDP-EE--TNP-----RELQQSGWQAILNSFKSYTENNL 137 (144)
T ss_dssp EEEEET-T---CCEEEEEEEECSS-SEEEEEEECC-CS--SSC-----HHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEeC-C---CeEEEEEEEEcCC-CEEEEEEEeC-CC--HHH-----HHHHHHHHHHHHHHHHHHHHhHh
Confidence 999853 3 3578899999864 7999998765 31 111 12346688889999999988754
No 55
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=98.51 E-value=4e-07 Score=82.51 Aligned_cols=129 Identities=14% Similarity=0.235 Sum_probs=85.3
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFEQ 355 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr~ 355 (663)
.++.++.|+||+++||++|+|.+++++|+|.+. +-.+.|+..++.. . .+. +..+ ++++ .++++|.|..
T Consensus 9 ~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~---~~~~~G~~~~~~~-~-~g~----~~~~-v~e~--~p~~~l~~~~ 76 (143)
T 1xn6_A 9 DIKQTIVFNASIQKVWSVVSTAEGIASWFMPND---FVLEVGHEFHVQS-P-FGP----SPCK-VLEI--DEPNHLSFSW 76 (143)
T ss_dssp CEEEEEEESSCHHHHHHTTSCSHHHHTTSCCBC---CCCCTTCEECBCC-T-TCC----CCEE-EEEE--ETTTEEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCHhHHHHhcCCCC---cCcCCCCEEEEEE-c-CCC----ceEE-EEEE--eCCCEEEEEE
Confidence 588999999999999999999999999999732 2223444432222 1 121 1222 2222 4789999886
Q ss_pred EecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccch-----HHHHHHHHHhhHHHHH-HHHHHHHHh
Q 006041 356 VEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLS-----EAIMEEVIYEDLPSNL-CAIRDYVEK 419 (663)
Q Consensus 356 VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP-----~~L~er~vre~L~~~L-~ALR~RAEk 419 (663)
..+ .....|+|++.++|+|+|+++...-+..+...| ..-....+..+....| ..|++.+|+
T Consensus 77 ~~~---~~~~~~~l~~~~~g~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~l~~~L~~~le~ 143 (143)
T 1xn6_A 77 DTD---GWVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVEG 143 (143)
T ss_dssp TTT---TEEEEEEEEEEETTEEEEEEEEECCCSTTCBCTTTCSBHHHHHHHHHHHHHHHHTTHHHHHHHC
T ss_pred eCC---CEEEEEEEEECCCCcEEEEEEEEccCccccccccccchhhHHHHHHHHhHHHHHHHHHHHHhcC
Confidence 544 457789999988768999998774331000111 1123346777889999 999998873
No 56
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=98.49 E-value=5.4e-06 Score=77.80 Aligned_cols=139 Identities=11% Similarity=0.074 Sum_probs=90.4
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCC----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNL----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
...+..++.|+||+++||++++|.+.+.+|++.- ..+.+--+.|+..++...+.++.. +.+... ++++ .+++
T Consensus 12 ~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~g~-v~e~--~p~~ 87 (164)
T 3pu2_A 12 ATRLEFRRHFAATPEQLWAALTSPALLPAWLFARGWPMTECVFEPHKGGLIRQVWTGPEGRT-RGLTGR-VILA--EPPH 87 (164)
T ss_dssp TTEEEEEEEESSCHHHHHHHHHCTTTGGGTSCBTTBCEEEEEECCSTTCEEEEEEECGGGCE-EEEEEE-EEEE--ETTT
T ss_pred CceEEEEEEECCCHHHHHHHhcCHHHHhhEeCCCCeeeEEEEEeccCCCEEEEEEECCCCCE-EEEEEE-EEEE--cCCC
Confidence 4468899999999999999999999999999731 223333345666555444433321 222332 2232 4789
Q ss_pred eEEEEEEe-c--CCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 350 EISFEQVE-G--DFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 350 rIsfr~Ve-G--dFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
+|.|...- + .-......|+|++.++ +|+|+++..+.. .-.....+...+..+....|..|++.++..
T Consensus 88 rl~~t~~~~~~~~~~~s~vt~~l~~~~~-gT~l~l~~~~~~---~~~~~~~~~~~~~~GW~~~L~~L~~~l~~~ 157 (164)
T 3pu2_A 88 RLIHSELYDEDWTGGETLVTLQLLPVEG-GTELAMAVDYAT---PEARDAVAASAMATEMEEAYRHLDVMLAAL 157 (164)
T ss_dssp EEEEEEBCC---CCSCEEEEEEEEEETT-EEEEEEEEECSS---TTHHHHHHTSTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEeccCCCCCCCEEEEEEEEEcCC-CEEEEEEEEeCC---HHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 99988642 1 1123577889999875 699999887431 111222223346778888999999988765
No 57
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=98.47 E-value=1.6e-06 Score=80.83 Aligned_cols=137 Identities=10% Similarity=0.113 Sum_probs=87.5
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCC----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEee-eCCC
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNL----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICE-QHEQ 349 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E-~ppr 349 (663)
..+..++.|+||+++||++++|.+.+++|++.- ..+++--+.|+..++...+.++-. + +... +.+ .+++
T Consensus 8 ~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~-~~g~----v~e~~p~~ 81 (164)
T 2l9p_A 8 NKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQAPQMIS-Y-TIAE----YLQVDAPY 81 (164)
T ss_dssp SEEEECCEESSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECCCSTTEEEEEEEEETTEEE-E-EEEE----ESCCBTTT
T ss_pred ceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEeccCCCEEEEEEECCCCCE-E-EEEE----EEEEcCCC
Confidence 458889999999999999999999999997531 122222234544444333322321 1 2222 233 4779
Q ss_pred eEEEEEEecC--------CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 350 EISFEQVEGD--------FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 350 rIsfr~VeGd--------Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+|.|....++ +.....+|+|++.++ +|+|++...+.+. . ....++...+..+....|..|++.+++..
T Consensus 82 rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~-gT~l~~~~~~~~~--~-~~~~~~~~~~~~Gw~~~L~~L~~~le~~~ 157 (164)
T 2l9p_A 82 YIEYLDYFATSKGEKDTSMPGMHITLNFEEVKG-KTTVTSTSTFPTE--S-AAQQAIDMGVETGMNSTLNQLEKLLNQKL 157 (164)
T ss_dssp EEEEEEEEEBTTBSCCSSSCCEEEEEEECCCSS-SEEEEEEEECSST--T-HHHHHHHHTHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEEEEecCCCCCccCCCCceEEEEEEEECCC-CEEEEEEEEcCCH--H-HHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Confidence 9999865321 124577889988765 7999998765321 1 11223333467788999999999988753
No 58
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=98.45 E-value=6.7e-07 Score=82.83 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=87.3
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
...++.++.|+||+++||++|+|.+.+++|++.+... -.+.|+..++...|.. .+..+ ++++ .++++|.|
T Consensus 8 ~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~--~~~~Gg~~~~~~~g~~-----~~~~~-v~e~--~p~~~l~~ 77 (160)
T 2lak_A 8 SFVVRREAHLAAPPAAVFALMTDPEKILRWMGTEAEV--EPEPGGLYLVNVTGAR-----FARGS-FREV--VPVHRLAY 77 (160)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHCHHHHHHTSCSSEEE--SCSTTCCEEECSSTTC-----CSSCC-EEEE--ETTTEEEE
T ss_pred CceEEEEEEeCCCHHHHHHHhcChHHHhhhCCCccee--eccCCCEEEEEEeCCc-----eEEEE-EEEE--cCCCEEEE
Confidence 3468999999999999999999999999999875433 2234554433222211 01111 1222 37899998
Q ss_pred EEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 354 EQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 354 r~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
....+. .......|+|++.++ +|+|++....-+ . ......+..+....|..|++.+|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~---~----~~~~~~~~~gw~~~L~~Lk~~le~~~~ 143 (160)
T 2lak_A 78 SFGWDGSEVVPPGSSLVEIDLIEQGG-GTLLRLTHSGLP---S----AEQCAGHEEGWAHYLGRLTEVAAGRDP 143 (160)
T ss_dssp CCCCCSSSCCCTTSCEEEEEEEECSS-SEEEEEEEECCC---S----HHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred EEEecCCCCCCCCcEEEEEEEEECCC-CEEEEEEEeCCC---C----HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 865432 125688999999875 699999775212 1 112244567888999999999987643
No 59
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=98.42 E-value=8.2e-06 Score=76.10 Aligned_cols=140 Identities=16% Similarity=0.028 Sum_probs=87.9
Q ss_pred CCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCC-----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEee
Q 006041 271 GGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNL-----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICE 345 (663)
Q Consensus 271 ~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V-----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E 345 (663)
+.....++.++.|+||+++||++++|.+.+++|++.. ..+++--+.|+..++.....++.. +.+..+ ++++
T Consensus 4 ~~~~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~g~-v~e~-- 79 (161)
T 3rd6_A 4 SVIHSTFTIERTYPQSPDRVFHAFADKATVRRWRVDGDGFTVAEFSFDFRVGGGEVSRFSYGGGPE-VRLDAQ-FQDI-- 79 (161)
T ss_dssp CEEEEEEEEEEEESSCHHHHHHHHHCHHHHHHHTCCCCC---CEEEECCSTTCEEEEEECSTTSCC-EEEEEE-EEEE--
T ss_pred cccCceEEEEEEECCCHHHHHHHhcCHHHHhhccCCCCCceeeEEEEccCcCCEEEEEEECCCCCE-EEEEEE-EEEE--
Confidence 3345678889999999999999999999999999543 223333345665555433222321 222332 2233
Q ss_pred eCCCeEEEEEEe---cC-CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 346 QHEQEISFEQVE---GD-FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 346 ~pprrIsfr~Ve---Gd-Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
.++++|.|.... |. ......+|+|++.++ +|+|+++...-+..+.-. ......+-...|..|++.++..
T Consensus 80 ~p~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~-gT~lt~~~~~~~~~~~~~-----~~~~~~GW~~~L~~L~~~le~~ 152 (161)
T 3rd6_A 80 VPDQRIVFSYRMAIGPQPMSASLTTVELTPSGD-GTRLTYTEQGAFFDGVDS-----AKGREEGTRGLLEALAAELQKW 152 (161)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEEEEEEEETT-EEEEEEEEEEEEETTCCC-----HHHHHHHHHHHHHHHHHHC---
T ss_pred cCCCEEEEEEEecCCCCCCCceEEEEEEEECCC-CEEEEEEEEecCcchhhh-----HHHHHHHHHHHHHHHHHHHhhc
Confidence 478999998652 21 224567889999875 699999887532111001 1355678888999999887754
No 60
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=98.42 E-value=1.2e-05 Score=75.81 Aligned_cols=139 Identities=15% Similarity=0.114 Sum_probs=91.5
Q ss_pred eeEEEEEEEEEcCCHHHHHHHHhccCcccccCcC-----CcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeC
Q 006041 273 VHRCVVASITVKAPVSEVWNVMTAYETLPEIVPN-----LAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQH 347 (663)
Q Consensus 273 ~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~-----V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~p 347 (663)
....++.++.|+||+++||++++|.+.+.+|+.. +..+++--+.|+..++...+.++.. +.+..+ ++++ .+
T Consensus 7 ~~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~~~~~~~~~~~~~d~~~GG~~~~~~~~~~G~~-~~~~g~-v~ev--~p 82 (166)
T 3put_A 7 EHTTFVIERRLTAPVARVFRAWSTPESKRQWFACHGEWVPLEYALDFRPGGTERNYTADTDGLL-HAYDAR-YIDI--VP 82 (166)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHHCHHHHHHHHTCC---CCSEEEECCSTTCEEEEEEECTTSCE-EEEEEE-EEEE--ET
T ss_pred CcceEEEEEEECCCHHHHHHHhCCHHHHHhcCCCCCCceeeEEEeCcccCCEEEEEEECCCCCE-EEEEEE-EEEE--cC
Confidence 4567899999999999999999999999999842 2334444456666655444333322 222332 2233 47
Q ss_pred CCeEEEEEEe---c-CCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 348 EQEISFEQVE---G-DFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 348 prrIsfr~Ve---G-dFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+++|.|.... | +......+|+|++.++ +|+|+++...-+..+.-. ......+-...|..|++.+|...
T Consensus 83 ~~rlv~t~~~~~~~~~~~~s~vt~~l~~~~~-gT~ltl~~~~~~~~~~~~-----~~~~~~GW~~~L~~L~~~le~~~ 154 (166)
T 3put_A 83 DTRIIYAYEMKLGQTRISASLVTVAFDVEPS-GTRMVFTEQVVFLDGYGD-----NGARLQGTEIGLDNLELFLVRET 154 (166)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEEEEEECSS-SEEEEEEEEEEEETTCCC-----TTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEEEecCCCCCCCceEEEEEEEECCC-CEEEEEEEEecCccchhh-----HHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999988652 2 1224567889999874 699999876543111101 13456788889999999998753
No 61
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=98.40 E-value=1.2e-06 Score=82.81 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=70.0
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccccee---------------------------------------------
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC--------------------------------------------- 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~--------------------------------------------- 128 (663)
..|+.++.|++|+++||++++|+++|++|+|.+.+
T Consensus 5 ~~v~~si~I~ap~~~V~~~v~D~~~~p~~~P~~~~~~v~~~~~~~~~~~~~~~~~G~~~~~~s~~~~~~~~~~i~~~~~~ 84 (172)
T 3tfz_A 5 RHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRDLDPARRVIAYRQLE 84 (172)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGGHHHHCSSEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEE
T ss_pred cEEEEEEEeCCCHHHHHHHHHhHHHHHhhCcccceEEEEecCCCEEEEEEEEecCCEEEEEEEEEEEeCCCCEEEEEEee
Confidence 46899999999999999999999999999999986
Q ss_pred ----------------c-CCceEEEEEEEEecCCCC-------------CHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ----------------R-SSTTTLSYEVNVIPRLNF-------------PAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ----------------~-~~gT~LtY~v~V~P~f~v-------------P~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
. +++|+++|+++..++-.+ +...+.+.+.+++..+|.++|++||+.
T Consensus 85 ~~gpf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~l~~~~~~~L~~lk~~aE~~ 160 (172)
T 3tfz_A 85 TAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVERNSVADLNAVLGEAERR 160 (172)
T ss_dssp CCTTEEEEEEEEEEEEEETTEEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhcEEEEEEEECCCCcEEEEEEEEEEEcChhHHHhhccccCchhhHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 2 378999999887754333 234789999999999999999999975
No 62
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=98.38 E-value=1.4e-05 Score=74.63 Aligned_cols=140 Identities=14% Similarity=0.046 Sum_probs=91.7
Q ss_pred eeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCC-----cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeC
Q 006041 273 VHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNL-----AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQH 347 (663)
Q Consensus 273 ~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V-----~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~p 347 (663)
....++.++.|+||+++||++++|.+.+++|++.. ..+++--+.|+..++.....++.. +.+..+ ++++ .+
T Consensus 7 ~~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~g~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~g~-v~e~--~p 82 (162)
T 3q64_A 7 VHSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMDFRVGGKEVNAGGPKDGPI-HVYTAT-YQDI--VP 82 (162)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHHCHHHHHHHSSCTTSCCGGGCEECCSTTCEEEEEECCTTSCC-EEEEEE-EEEE--ET
T ss_pred ccceEEEEEEeCCCHHHHHHHHCCHHHHhhcCCCCCCccceEEEECCccCCEEEEEEECCCCCE-EEEEEE-EEEE--cC
Confidence 35568899999999999999999999999999653 123333345666555443323321 222332 2233 47
Q ss_pred CCeEEEEEEe---cC-CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Q 006041 348 EQEISFEQVE---GD-FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREG 422 (663)
Q Consensus 348 prrIsfr~Ve---Gd-Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a 422 (663)
+++|.|.... |. .......|+|++.++ +|+|+++...-+..+.-. ......+-...|..|++.++...-
T Consensus 83 ~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~-gT~lt~~~~~~~~~~~~~-----~~~~~~GW~~~L~~L~~~le~~~~ 155 (162)
T 3q64_A 83 DQRIVYSYDMLFGETRISVSLATIQLFAEGE-GTRLVLTEQGAFLDGHDT-----PSTREHGTGVLLDLLDAFLDKTTL 155 (162)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEEEEEEETT-EEEEEEEEEEEEETTSSC-----HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEEecCCCCCCCceEEEEEEEEcCC-CEEEEEEEEecCccchhH-----HHHHHHHHHHHHHHHHHHHhhchh
Confidence 8999998753 21 224567889999875 699999887533111001 135667888999999999987643
No 63
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=98.33 E-value=8.6e-06 Score=78.55 Aligned_cols=125 Identities=15% Similarity=0.137 Sum_probs=83.1
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
...+..++.|+||+++||++|+|.+.+++|++.+.... -+.|+..++...+ . . ...+ ++++ .++++|.|
T Consensus 35 ~~~i~~~~~i~Ap~e~VW~altdp~~l~~W~~~~~~~d--~~~Gg~~~~~~~~-~---~--~~~~-v~e~--~p~~rl~~ 103 (184)
T 2nn5_A 35 TIYFGTERAISASPQTIWRYLTETDKLKQWFPELEIGE--LGVNGFWRFILPD-F---E--ETMP-FTDY--AEEKYLGV 103 (184)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEEEE--CSTTCEEEEEETT-E---E--EEEE-EEEE--ETTTEEEE
T ss_pred CcEEEEEEEeCCCHHHHHHHHcCHHHHHHhCCCccccc--cCCCCEEEEEEeC-C---C--ceEE-EEEe--cCCCEEEE
Confidence 36799999999999999999999999999998654322 2355555443322 1 1 1121 2222 47899988
Q ss_pred EEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 354 EQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 354 r~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
... ....+|+|++..+++|+|+++..+.- + ++.. ......+...+|..|++.+|..
T Consensus 104 ~~~-----~~~v~~~l~~~~~~gT~l~~~~~~~~---g-~~~~--~~~~~~GW~~~L~~Lk~~le~g 159 (184)
T 2nn5_A 104 TWD-----TGIIYFDLKEQAPHQTLLVFSESLPE---N-FTTP--RHKDIAGWSIVLNRLKQVVETP 159 (184)
T ss_dssp EET-----TEEEEEEEEEEETTEEEEEEEEEECT---T-CSSC--HHHHHHHHHHHHHHHHHHHHCT
T ss_pred EEc-----CeEEEEEEEECCCCCEEEEEEEeccC---C-ccch--hhHHHHHHHHHHHHHHHHHhcC
Confidence 863 25778999993345799999843321 1 2111 1125668888999999999854
No 64
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=98.33 E-value=1.7e-06 Score=81.44 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=68.5
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhcccccee--------------------------------------------
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC-------------------------------------------- 128 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~-------------------------------------------- 128 (663)
..+++.+|.|+||++.||++|||++++.+..|.+..
T Consensus 17 ~~~i~~si~I~Appe~VW~~ltD~~~~~~W~p~v~~~~~~G~~~~G~~~~~~~~~~~~~~~~v~~~~p~~~~~~~~~~p~ 96 (155)
T 3ijt_A 17 SMKFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPF 96 (155)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEESSSSSTTCEEEEEETTSCCEEEEECCCBTTTEEEEEEEETT
T ss_pred cEEEEEEEEEcCCHHHHHHHHhCcccccccchhhEeeeccCCCCCCCEEEEEeCCCCcEEEEEEEEeCCcEEEEEEecCC
Confidence 456999999999999999999999999999999864
Q ss_pred ------------cCCceEEEEEEEEecCCCCCHH-HHHHHHhhchHHHHHHHHHHHHH
Q 006041 129 ------------RSSTTTLSYEVNVIPRLNFPAI-FLERIIRSDLPVNLQALACRAER 173 (663)
Q Consensus 129 ------------~~~gT~LtY~v~V~P~f~vP~~-lie~~lr~dLp~nL~Ai~~~Ae~ 173 (663)
.+++|+++++.+.......|.. -....++.+++..|.+|++.||+
T Consensus 97 ~~~~~~h~l~p~~~ggTrvt~~~~~~G~~~~~~~~~~~~~i~~~~~~~l~~LK~~aE~ 154 (155)
T 3ijt_A 97 GNVLFEHEILENPDGTISLRHSVSLTDSDTTEEALAFLKQIFADVPESVGKLKQILET 154 (155)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEESCCSCCHHHHHHHHHHHTTHHHHHHHHHHHHTC
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEEEECCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2478999999999776532322 23579999999999999999986
No 65
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=98.30 E-value=3.3e-06 Score=80.74 Aligned_cols=81 Identities=17% Similarity=0.313 Sum_probs=72.2
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccccee---------------------------------------------
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC--------------------------------------------- 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~--------------------------------------------- 128 (663)
.+|+.++.|++|+++||++++|+++|.+|+|.+..
T Consensus 3 ~~v~~si~I~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~ts~~~~d~~~~~I~~~~ 82 (169)
T 3tvq_A 3 ARTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFDFRLKTRPDANGRVWEWVSHRVPDKGSRTVRAHR 82 (169)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEEETTEEEEEEEECCCTTSCCCEEEEEEEEEGGGTEEEEEE
T ss_pred CeEEEEEEecCCHHHHHHHHHhhhHHHHHHhheeEEEEEecCCCEEEEEEEEEecCCCeEEEEEEEEEEcCCCcEEEEEE
Confidence 46889999999999999999999999999999887
Q ss_pred -----------------cCCceEEEEE--EEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 -----------------RSSTTTLSYE--VNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 -----------------~~~gT~LtY~--v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.++||.++|. .++.|...+|...+.+++..+++..|.+||++||+.
T Consensus 83 l~~gPf~~~~g~W~f~p~~~gt~V~~~~df~~~~~~p~~~~~~~~av~~~~~~~L~~LK~~aE~~ 147 (169)
T 3tvq_A 83 VETGPFAYMNLHWTYRAVAGGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDR 147 (169)
T ss_dssp SSCTTEEEEEEEEEEEEETTEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChhheeeEEEEEECCCCEEEEEEEEEEecCCCcccHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 2456988885 567777889999999999999999999999999975
No 66
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=98.30 E-value=1.2e-05 Score=76.21 Aligned_cols=138 Identities=12% Similarity=0.157 Sum_probs=92.3
Q ss_pred EEEEEEEEcCCHHHHHHH-HhccCcc-cccCcCCcEEEEEeecC--CEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeE
Q 006041 276 CVVASITVKAPVSEVWNV-MTAYETL-PEIVPNLAISKILSREN--NKVRILQEGCKGLLYMVLHARVVMDICEQHEQEI 351 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaV-LTDyEny-PeWiP~V~sSrVLer~g--n~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrI 351 (663)
.+..++.+++||+.+|++ +.|+.++ |.|+|.+..+.-++.++ +.++.+.-...+-. -.... .++..+...+.+
T Consensus 5 ~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~veGdg~~Gsir~~t~~~g~~~-~~~kE--rle~iD~~~~~~ 81 (154)
T 2wql_A 5 SHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGDGGAGTVRIITLPEGSPI-TTMTV--RTDAVNKEALSY 81 (154)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESSSSTTCEEEEECCTTCSC-CEEEE--EEEEEETTTTEE
T ss_pred EEEEEEEecCCHHHHHHHHhhcccccchhhcccceeEEEEECCCCCCeEEEEEEcCCCCc-eEEEE--EEEEEehhhCEE
Confidence 478899999999999975 5899985 99999876654455543 23444332222211 11122 344455567999
Q ss_pred EEEEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHH
Q 006041 352 SFEQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYV 417 (663)
Q Consensus 352 sfr~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RA 417 (663)
.|+.++|+ +..+..+..+.|.++|+|.++++.++++.++...|+-.+.. .......+++++.+++
T Consensus 82 ~y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t~~Y~~~~~~~~~ee~~~~-~~~~~~~~~KaiEayL 151 (154)
T 2wql_A 82 DSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAVVPEENIKF-ADAQNTALFKAIEAYL 151 (154)
T ss_dssp EEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCCCCHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred EEEEEeccccccceEEEEEEEEEeeCCCCcEEEEEEEEEEECCCCCCCHHHHHH-HHHHHHhHHHHHHHHH
Confidence 99999997 34778888999998889999999999987554444433332 2333455666666554
No 67
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=98.24 E-value=1.1e-05 Score=74.26 Aligned_cols=132 Identities=10% Similarity=-0.052 Sum_probs=81.8
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCC----c--EEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCC
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNL----A--ISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQ 349 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V----~--sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~ppr 349 (663)
.++.++.|+||+++||++++|.+.+.+|++.- . .+.+--+.|+..++...+.++.. +.+..+ ++++ .+++
T Consensus 3 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~-~~~~g~-v~e~--~p~~ 78 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQR-YKVSGQ-VTHV--KPPQ 78 (152)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECTTCCE-EEEEEE-EEEE--ETTT
T ss_pred eEEEEEEECCCHHHHHHHHcCHHHHhhccCCCCcccccceeEEcccCCcEEEEEEECCCCCE-EEEEEE-EEEE--cCCC
Confidence 47788999999999999999999999998741 1 12222234444444433333321 222332 2233 4789
Q ss_pred eEEEEEEecCC-----ceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 350 EISFEQVEGDF-----DSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 350 rIsfr~VeGdF-----r~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
+|.|.....+. .....+|+|++.++ +|+|+++..--+ -.. .......+-...|..|++.++-
T Consensus 79 ~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~-gT~l~l~~~~~~-----~~~--~~~~~~~GW~~~L~~L~~~l~~ 145 (152)
T 3eli_A 79 SVGFTWGWHDDDDRRGAESHVMFIVEPCAK-GARLILDHRELG-----DDE--MSLRHEEGWTSSLRKLAAELAL 145 (152)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECCBC---CEEEEEEEESCS-----CHH--HHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeecCCCCCCCCcEEEEEEEEECCC-CEEEEEEEccCC-----CHH--HHHHHHHHHHHHHHHHHHHHhh
Confidence 99988654221 24566778888875 599998654111 111 2345667888999999988764
No 68
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=98.21 E-value=2.3e-05 Score=72.46 Aligned_cols=130 Identities=12% Similarity=0.146 Sum_probs=83.5
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
...++.++.|+||+++||++|+|.+.+++|++. +.+-.+.|+...+. +..+. .+..+ ++++ .++++|.|
T Consensus 8 ~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~---~~~~~~~Gg~~~~~--~~~g~---~~~g~-v~e~--~p~~~l~~ 76 (151)
T 3q63_A 8 NRTVVVERQISHPPEKLWRALTQPHLIEEWLMK---NDFKPAVGHRFNIS--ADWGG---VLDCE-VLAV--EPNKTLSY 76 (151)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCHHHHHHHSCE---ECCCSSTTCEEEEE--CTTSC---EEEEE-EEEE--ETTTEEEE
T ss_pred CCeEEEEEEeCCCHHHHHHHHcCHHHHHhhcCc---CCCccCCCCEEEEE--CCCCC---EEEEE-EEEE--eCCCEEEE
Confidence 456889999999999999999999999999984 22222345554433 32221 12232 2232 47899999
Q ss_pred EEEecC-----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 354 EQVEGD-----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 354 r~VeGd-----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
....++ .......|+|++.++ +|+|+++...-+. .. .. ....+..+-...|..|++.+|..
T Consensus 77 ~~~~~~~~~~~~~~s~v~~~l~~~~~-gT~l~l~~~g~~~-~~--~~--~~~~~~~GW~~~L~~L~~~le~~ 142 (151)
T 3q63_A 77 TWNLAHQDPAFDLRSVVTFTLTPTPT-GTHLRMEQSGFRP-DQ--RR--AYGGAKMGWPQFFEKLEQLLDRT 142 (151)
T ss_dssp ECBBCCSSTTTCBCCEEEEEEEECSS-SEEEEEEEECCCT-TC--HH--HHHHHHHHHHHHHHHHHHHHC--
T ss_pred EEecCCCCCCCCCCeEEEEEEEEcCC-CEEEEEEEeCCCc-ch--HH--HHHhhhhCHHHHHHHHHHHHhcc
Confidence 875421 124467789999876 5999998763221 11 11 12345677888999999988764
No 69
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=98.20 E-value=9.3e-06 Score=78.35 Aligned_cols=131 Identities=6% Similarity=0.075 Sum_probs=86.6
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEecc-------------ceeEEEEEEEEEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCK-------------GLLYMVLHARVVMD 342 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~-------------gll~~~~~~rvVLD 342 (663)
.++.++.|+||+++||++|+|.+.+++|++.+ .+--+.|+..++.....+ +. ...+..+ +++
T Consensus 20 ~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~~---~~d~~~Gg~~~~~~~~~~~~~~~~p~~~~~~g~-~~~~~g~-v~e 94 (191)
T 2k5g_A 20 SIRFERLLPGPIERVWAWLADADKRARWLAGG---ELPRQPGQTFELHFNHAALTAETAPARYAQYDR-PIVARHT-LLR 94 (191)
T ss_dssp SEEEEEEESSSSHHHHHHHHCHHHHTTTSCCC---CCCSSTTCEEEEEECGGGSCCSSCCSSCSGGGS-CEEEEEE-EEE
T ss_pred eEEEEEEeCCCHHHHHHHHcCHHHHhhcCCCC---CCCccCCCEEEEEEcCCccccccCcccccccCC-CceeEEE-EEE
Confidence 48888999999999999999999999999875 222235555555443211 00 1223332 223
Q ss_pred EeeeCCCeEEEEEEecCC-ceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhh
Q 006041 343 ICEQHEQEISFEQVEGDF-DSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKRE 421 (663)
Q Consensus 343 V~E~pprrIsfr~VeGdF-r~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~ 421 (663)
+ .++++|.|....++. ......|+|++.++ +|+|+++...-+ + +. ....+..+...+|..|++.+|...
T Consensus 95 ~--~pp~rl~~~~~~~~~~~~~~v~~~l~~~~~-gT~l~~~~~~~~--~---~~--~~~~~~~GW~~~L~~L~~~le~~~ 164 (191)
T 2k5g_A 95 C--EPPRVLALTWGGGAGEAPSEVLFELSEAGE-QVRLVLTHTRLA--D---RA--AMLDVAGGWHAHLAVLAGKLAGQA 164 (191)
T ss_dssp E--ETTTEEEEECCCCSSSSCCEEEEEEEECSS-SEEEEEEEECCC--S---HH--HHHHHTTTTTTHHHHHHHHHHTSC
T ss_pred e--cCCCEEEEEeecCCCCCCEEEEEEEEEcCC-CEEEEEEEecCC--C---HH--HHHHHHHhHHHHHHHHHHHHCCCC
Confidence 3 478999987654321 14577899999875 599998876212 1 11 224566777889999999988653
No 70
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=98.19 E-value=3.5e-05 Score=72.82 Aligned_cols=138 Identities=12% Similarity=0.136 Sum_probs=88.8
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcC----CcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPN----LAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~----V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
..+..++.|+||+++||++++|-+.+.+|+.. +..+++--+.|+..++...+.++-. +.+..+ ++++ .++++
T Consensus 13 ~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~p~~~~~~~~~~d~r~GG~~~~~~~~~~G~~-~~~~g~-~~ev--~p~~r 88 (168)
T 3uid_A 13 LTLTITAEFAAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHDLRPGGRVTYFMTGPDGEK-YAGYWE-ITAV--DEPHS 88 (168)
T ss_dssp TEEEEEEEESSCHHHHHHHHHSHHHHHHHHCCTTSCCEEEEECCSTTCEEEEEEECTTSCE-EEEEEE-EEEE--ETTTE
T ss_pred CEEEEEEEEcCCHHHHHHHhCCHHHHhhEeCCCCeeeeEEEEcccCCcEEEEEEECCCCCE-EeeEEE-EEEE--eCCcE
Confidence 35888999999999999999999999999643 2223443456666655544434422 222332 2333 47899
Q ss_pred EEEEEEe----cC----CceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 351 ISFEQVE----GD----FDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 351 Isfr~Ve----Gd----Fr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
|.|...- |. ......+|+|++.+ ++|+|+++..+.. ......++...+..+....|..|++.++..
T Consensus 89 lv~t~~~~~~~g~p~~~~~~s~vt~~l~~~~-~gT~lt~~~~~~~---~~~~~~~~~~g~~~GW~~~L~~L~~~l~~~ 162 (168)
T 3uid_A 89 FSFLDGFADEDFNPNTDLPVSTNVYTFTEHD-GGTRATYVGTYAS---AEALQQVLDMGVIEGASSAINQIDALLTAT 162 (168)
T ss_dssp EEEEEEEECTTSCBCSSCCCEEEEEEEEEET-TEEEEEEEEECSC---HHHHHHHHHTTHHHHHHHHHHHHHHHTCSC
T ss_pred EEEEEeeccCCCCcCCCCCcEEEEEEEEECC-CCEEEEEEEecCC---HHHHHHHHHhcHHHHHHHHHHHHHHHHHhh
Confidence 9988642 21 12457889999986 5799999854321 101111222246778889999999887764
No 71
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=98.19 E-value=8.6e-06 Score=77.09 Aligned_cols=80 Identities=16% Similarity=0.316 Sum_probs=70.6
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
+++.++.|++|+++||++++|+++|++|+|..+.
T Consensus 4 ~v~~si~I~a~~~~V~~lV~Dve~yP~~~p~~~~~~vl~~~~~~~~~rl~~~~~~~G~~~~~ts~~~~d~~~~~I~~~~~ 83 (159)
T 3tl1_A 4 HTDNEITIAAPMELVWNMTNDIEKWPGLFSEYASVEVLGRDDDKVTFRLTMHPDADGKVWSWVSERVADPVTRTVRAQRV 83 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEEECSSEEEEEEEECCCTTSCCCEEEEEEEEETTTTEEEEEES
T ss_pred eeEEEEEecCCHHHHHHHHHhHHHhhhhhhCceEEEEEecCCCEEEEEEEEEeccCceEEEEEEEEEEcCCCCEEEEEEc
Confidence 5889999999999999999999999999999877
Q ss_pred ----------------cCCceEEEEEE--EEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ----------------RSSTTTLSYEV--NVIPRLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ----------------~~~gT~LtY~v--~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.++||.++|.+ ++.|...++...+..++.++++..|.+||+.||+.
T Consensus 84 ~~gPf~~l~g~W~f~p~~~gt~V~~~~df~~~~~~p~~~~~~~~~~~~~~~~~L~~lK~~~E~~ 147 (159)
T 3tl1_A 84 ETGPFQYMNIVWEYAETAEGTVMRWTQDFAMKPDAPVDDAWMTDNINRNSRTQMALIRDRIEQA 147 (159)
T ss_dssp SCTTEEEEEEEEEEEEETTEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCChhhccCEEEEEECCCCEEEEEEEEEEecCCCCCCHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 24689888775 66667777777799999999999999999999975
No 72
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=98.16 E-value=1.8e-06 Score=79.01 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=67.2
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
+|+.++.|+||++.||++|+|++++.+++|.+.+
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~~~~~w~p~v~~~~~~~g~~~~~G~~r~~~~~~G~~~~e~i~~~d~~~~~~~~~~~~g 82 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFSAIHRWHPQVSAPTLRGASPHTPGAERVFGAGTEEELVERLVERDESARRLVYTMPDP 82 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSGGGGGTCTTCCCEEEESSCTTSTTCEEEESSSSSSCEEEEEEEEETTTTEEEEEEEEC
T ss_pred eEEEEEEecCCHHHHHHHHhCcCcHHHhcCCceEEEEECCCCCCCCeEEEEEeCCCCEEEEEEEEEeCCCCEEEEEEecC
Confidence 6899999999999999999999999999998766
Q ss_pred ----------------cCCceEEEEEEEEec-CCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ----------------RSSTTTLSYEVNVIP-RLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ----------------~~~gT~LtY~v~V~P-~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.++||.++|+.++.| +..++...+. .++.++...|.+|++.+|+.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~gt~v~w~~~f~~~p~~~~~~~~~-~~~~~~~~~L~~Lk~~~e~~ 144 (151)
T 2le1_A 83 PFPITNHRAVLEVVPRDDRHCTVVWTAMFDCSPETARELESV-IGDGVFAVGLNALAERYGRL 144 (151)
T ss_dssp SSSEEEEEEEEEEEESSSSCEEEEEEEEEEECHHHHHHHHHH-TTTTHHHHHHHHHHHHTTTT
T ss_pred CCCceeEEEEEEEEECCCCcEEEEEEEEEEecCCCCCHHHHH-HHHHHHHHHHHHHHHHhhcc
Confidence 135799999998887 3455555666 78899999999999998864
No 73
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=98.15 E-value=8.2e-06 Score=75.02 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=67.5
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
+|+.++.|++|++.||++|||+++|++++|.+.+
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l~D~e~~~~w~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIGEDKYKADLQIGIAAVKGKYDAIIEVTDIKPPYHYKLLVNGE 83 (162)
T ss_dssp EEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETTEEEEEEEECCGGGCEEEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEeeEEEecCCHHHHHHHhcCHHHHHhhCCCceEeEEeCCCeEEEEEEEEeeeEEEEEEEEEEEEecCCCcEEEEEEEec
Confidence 4888999999999999999999999999998865
Q ss_pred -----------------cCCceEEEEEEEEecCCC---CCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 -----------------RSSTTTLSYEVNVIPRLN---FPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 -----------------~~~gT~LtY~v~V~P~f~---vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.++||+|+|++++.+... ++..++....++-+...+..+++.+|+.
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~lk~~~e~~ 149 (162)
T 2pcs_A 84 GGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKS 149 (162)
T ss_dssp ETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccEEEEEEEEEEecCCCcEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 125799999888887544 4666888888888889999999988863
No 74
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=98.12 E-value=1.3e-05 Score=76.32 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=85.1
Q ss_pred CCceEEEEEEccC-CcceEEEEEEEccCHHHHHHHhhCchhhhhcccccee-----------------------------
Q 006041 79 QRKVHCEVEVVSW-RERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC----------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~-~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~----------------------------- 128 (663)
.++|.|-....+. +-..+.+...|+++++.+|++|.|.+...+|.|++.+
T Consensus 11 ~~gv~v~~~~~~~~~~~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~~~~~~i~y~~~~~p~p~~~RD~v 90 (189)
T 3qsz_A 11 AEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMPDVAASELLKATDTEQYHYLDNSAPWPVSNRDGV 90 (189)
T ss_dssp ETTEEEEEECCTTCSSCEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEECSSEEEEEEEECCSSSCCCEEEE
T ss_pred CCCEEEEEEeCCCCCeEEEEEEEEEECCHHHHHHHHHhHHHhhhHHHhcCEEEEEeecCCceEEEEEeecCCCcCCcceE
Confidence 4567777776655 3467999999999999999999999999999999988
Q ss_pred --------------------------------------------cCCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHH
Q 006041 129 --------------------------------------------RSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNL 164 (663)
Q Consensus 129 --------------------------------------------~~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL 164 (663)
.+++|.++|.+++.|+.++|..++...+++.++..|
T Consensus 91 ~~~~~~~~~~g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p~~~~t~vt~~~~~dp~G~iP~~lvn~~~~~~~~~~l 170 (189)
T 3qsz_A 91 YHFTYEKAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDADGVDVTYQMHASPGGSIPSWLANQTVVETPFGTL 170 (189)
T ss_dssp EEEEEEECTTSCEEEEEEECTTSSCCCTTSEECCCEEEEEEEEECSSSEEEEEEEEECSCSSSCHHHHHHTTTHHHHHHH
T ss_pred EEEEEEECCCCeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEECCCeEEEEEEEEeCCCCCCCHHHHHHHHHHHHHHHH
Confidence 236799999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 006041 165 QALACRAERS 174 (663)
Q Consensus 165 ~Ai~~~Ae~~ 174 (663)
++|++++++.
T Consensus 171 ~~L~k~~~~~ 180 (189)
T 3qsz_A 171 KALRSHLRQA 180 (189)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHhhhc
Confidence 9999999864
No 75
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=98.11 E-value=1.6e-05 Score=72.64 Aligned_cols=128 Identities=15% Similarity=0.212 Sum_probs=81.4
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEEE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFEQ 355 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr~ 355 (663)
.++.++.|+||+++||++|+|.+++++|++.+ .+-.+.|+..++.. . .+. +..+ ++++ .++++|.|..
T Consensus 6 ~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~---~~~~~~Gg~~~~~~-~-~g~----~~~~-v~e~--~p~~~l~~~~ 73 (146)
T 1xn5_A 6 DIKKEVRFNAPIEKVWEAVSTSEGLAFWFMEN---DLKAETGHHFHLQS-P-FGP----SPCQ-VTDV--ERPIKLSFTW 73 (146)
T ss_dssp CEEEEEEESSCHHHHHHHTTSHHHHHTTSCCB---CCCSCTTCEEEEEC-S-SCE----EEEE-EEEE--ETTTEEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhChhHHHHhcCCC---CCCccCCCEEEEEe-c-CCc----eEEE-EEEE--eCCcEEEEEE
Confidence 48889999999999999999999999999864 12123444433332 1 121 2222 2222 4789999886
Q ss_pred EecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccC------ccchHHHHHHHHHhhHHHHH-HHHHHHHHhh
Q 006041 356 VEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKN------SLLSEAIMEEVIYEDLPSNL-CAIRDYVEKR 420 (663)
Q Consensus 356 VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~g------g~LP~~L~er~vre~L~~~L-~ALR~RAEkr 420 (663)
.. ......|+|++.++ +|+|+++...-+..+ +.. .......+..+-...| ..|++.++..
T Consensus 74 ~~---~~~~~~~~l~~~~~-gT~l~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~GW~~~l~~~L~~~l~~~ 140 (146)
T 1xn5_A 74 DT---DGWSVTFHLKEEEN-GTIFTIVHSGWKQGDTKVEKAGAE-SAVVHERMDRGWHDLVNERLRQIVELE 140 (146)
T ss_dssp TT---TTEEEEEEEEECSS-SEEEEEEEECCCSTTCBCSSSSSB-HHHHHHHHHHHHHHHTTTTTHHHHC--
T ss_pred eC---CCEEEEEEEEEcCC-CEEEEEEEEEecCCCcccccccch-hHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 52 23567899999875 599999875322100 000 1223445667888888 8898888754
No 76
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=98.11 E-value=7.5e-05 Score=67.91 Aligned_cols=109 Identities=7% Similarity=0.219 Sum_probs=79.2
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
..+..++.|++||++||+++.|+..+| |-+. |. . +++..+...+.+.|+
T Consensus 5 g~~~~e~~i~~~a~k~w~~~~~~~~~p-~g~~----------G~---------------~-----~ie~iD~~~~~~~y~ 53 (122)
T 1vjh_A 5 GALSVKFDVKCPADKFFSAFVEDTNRP-FEKN----------GK---------------T-----EIEAVDLVKKTMTIQ 53 (122)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHTTSC-SSTT----------CE---------------E-----EEEEEETTTTEEEEE
T ss_pred cEEEEEEEecCCHHHHHHHHhhcccCC-ccCC----------Cc---------------c-----EEEEEecccCEEEEE
Confidence 358899999999999999999998888 6432 10 0 234444567999999
Q ss_pred EEecCC----ceeEEEEEEEEcC-CCeEEEEEEEEEEeccCccc-hHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 355 QVEGDF----DSFQGKWLFEQLG-SHHTLLKYSVESKMQKNSLL-SEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 355 ~VeGdF----r~f~G~WtLeplg-dGgTrVtYtve~eP~~gg~L-P~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
.++|++ +.+.++|+|.+.+ +++|.+++++.|+...+... |.-+ .+.+..+++++.+++-+
T Consensus 54 iieGd~~~~~~~~~~~~~v~~~~~~~gs~vkwt~~ye~~~~~~~~p~~~-----~~~~~~~~k~ie~yll~ 119 (122)
T 1vjh_A 54 MSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHKDIDDPHSI-----IDESVKYFKKLDEAILN 119 (122)
T ss_dssp EECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESSTTSCCSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred EEEccccccEEEEEEEEEEEEecCCCCeEEEEEEEEEECCCCCCCHHHH-----HHHHHHHHHHHHHHHhh
Confidence 999997 6999999999974 55799999999997543333 3333 23445566666665543
No 77
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=97.93 E-value=3.1e-05 Score=71.93 Aligned_cols=79 Identities=15% Similarity=0.282 Sum_probs=68.2
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
+|..++.|+||+++||++|+|+++|.+++|.+.+
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~~~~~~w~p~v~~~~~~~GG~vR~~~~~~G~~~~Erl~~~D~~~~~~~y~iv~g~~~~~ 82 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNSLPDWLPYIPSSKLTEGGRVRHLANPDGETIIERLEVFNDKERYYTYSIMNAPFPVT 82 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCSTTCHHHHCTTCCEEEEEGGGTEEEEECTTSCEEEEEEEEEETTTTEEEEEEEECSSSEE
T ss_pred EEEEEEEEeCCHHHHHHHHhccccHHHhCCCeEEEEEeCCCeEEEEEeCCCCEEEEEEEEEeCCCCEEEEEEecCCCcee
Confidence 5889999999999999999999999999998876
Q ss_pred ---------c---CCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ---------R---SSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ---------~---~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
. ++||.++|+.++.| -.+..-.+...++.-.-.+|.+|++++|.+
T Consensus 83 ~~~~~~~v~p~~~~~gt~v~w~~~~~p-~g~~~~~~~~~~~~~~~~~L~~Lk~~~e~~ 139 (146)
T 3f08_A 83 NYLSTIQVKEGTESNTSLVEWSGTFTP-VAVSDEEAINLVHGIYSDGLKALQHAFLDL 139 (146)
T ss_dssp EEEEEEEEEECSSTTCEEEEEEEEEEE-SSSCHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEEEEEEEEEecCCCcEEEEEEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 36899999999998 455566677788889999999999998864
No 78
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=97.90 E-value=6.7e-06 Score=75.85 Aligned_cols=130 Identities=18% Similarity=0.274 Sum_probs=81.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
..++.++.|+||+++||++|+|.+++++|++.+ ..-.+.|+..++.. . .+. +..+ ++++ .++++|.|.
T Consensus 10 ~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~---~~~~~~Gg~~~~~~-~-~g~----~~~~-v~e~--~p~~~l~~~ 77 (152)
T 2kew_A 10 PDITKSITLEAPIQKVWETVSTSEGIAKWFMPN---DFQLKEGQEFHLQS-P-FGP----SPCK-VLAV--QAPTELSFE 77 (152)
T ss_dssp CCEEEEEEECSCHHHHHHHSSSSHHHHHHHCSC---CCCSCSSCCBCSSS-S-CCS----CCBE-EEEE--ETTTEEEEE
T ss_pred cEEEEEEEECCCHHHHHHHHhCHHHHHHhcCCC---CCCCCCCCEEEEEe-c-CCc----eEEE-EEEE--eCCcEEEEE
Confidence 358899999999999999999999999998872 11112333322211 1 111 1222 2222 478999987
Q ss_pred EEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccch-----HHHHHHHHHhhHHHHH-HHHHHHHHhh
Q 006041 355 QVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLS-----EAIMEEVIYEDLPSNL-CAIRDYVEKR 420 (663)
Q Consensus 355 ~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP-----~~L~er~vre~L~~~L-~ALR~RAEkr 420 (663)
...+ .....|+|++.++ +|+|++....-+......| .......+..+-..+| ..|++.+|..
T Consensus 78 ~~~~---~~~~~~~l~~~~~-gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~L~~~le~g 145 (152)
T 2kew_A 78 WDTE---GWVVTFQLEDLGE-KTGFTLIHSGWKEPNQVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEEL 145 (152)
T ss_dssp CTTS---CCEEEEEEECCSS-CEEEEEEECCSSCCSBCSSSSSSBHHHHHHHHHHHHHHHTTTHHHHHHTCS
T ss_pred EccC---CEEEEEEEEECCC-CEEEEEEEEeccCcccccccccchhHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 5433 4577899999876 5999987653221000011 1122345777888999 9999998754
No 79
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=97.85 E-value=4.9e-05 Score=68.86 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=63.7
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccccee---------------------------------------------
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC--------------------------------------------- 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~--------------------------------------------- 128 (663)
.+++.++.|++|++.||++|||++++++++|.+.+
T Consensus 13 m~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 92 (157)
T 2ns9_A 13 VRYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVEVEDGSFTIELRLSLGPLRGDARVRASFEDLEKPSKATVKGSGR 92 (157)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEEEETTEEEEEEEEESSSSEEEEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEEeeEEEEcCCHHHHHHHHcCHHHHHhhCCCceEEEECCCEEEEEEEEEEcceeEEEEEEEEEEecCCCcEEEEEEEec
Confidence 36999999999999999999999999999998742
Q ss_pred ----------------cCCceEEEEEEEEecCCC---CCHHHHHHHHhhchHHHHHHHHHHHH
Q 006041 129 ----------------RSSTTTLSYEVNVIPRLN---FPAIFLERIIRSDLPVNLQALACRAE 172 (663)
Q Consensus 129 ----------------~~~gT~LtY~v~V~P~f~---vP~~lie~~lr~dLp~nL~Ai~~~Ae 172 (663)
.++||+|+|+.++..... +...++....++.+-..+..+++.+|
T Consensus 93 ~~~~~~~~~~~~~l~~~~~gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~lk~~~e 155 (157)
T 2ns9_A 93 GAGSTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELG 155 (157)
T ss_dssp CSSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccEEEEEEEEEEeCCCcEEEEEEEEEEECcCHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 247899999987655432 44557888888888888888877765
No 80
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=97.85 E-value=0.0001 Score=71.32 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=83.5
Q ss_pred CeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeE
Q 006041 272 GVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEI 351 (663)
Q Consensus 272 g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrI 351 (663)
+..+.+..++.|+||+++||++++|.+.+++|++.. ..--+.|+..++. +. ... .++++ .++++|
T Consensus 18 ~~~~~i~~~r~i~Appe~Vw~alTdpe~l~~W~~p~---~~d~~~Gg~~~~~--~~-------~~g-~v~e~--~pp~rl 82 (181)
T 4fpw_A 18 GEARSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP---KGDLREGGNFALQ--GN-------ASG-DILRC--EPPRRL 82 (181)
T ss_dssp EEEEEEEEEEEESSCHHHHHHHHHCHHHHHHHSCCE---ESCCSTTCEEEES--SS-------CEE-ECCEE--ETTTEE
T ss_pred CCCceEEEEEEECCCHHHHHHHHcChHHHhhccCCC---ccCCCCCCEEEEE--ec-------CCE-EEEEE--cCCcEE
Confidence 446789999999999999999999999999998753 2222344443221 11 011 12222 478999
Q ss_pred EEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 352 SFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 352 sfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
.|....++-......|+|++.+ ++|+|+++....+ +. . ...+..+-...|..|++.++..
T Consensus 83 ~~tw~~~~~~~s~vt~~l~~~~-~gT~Ltl~~~~~~------~e-~-~~~~~~GW~~~L~~L~~~L~G~ 142 (181)
T 4fpw_A 83 TISWVYEGKPDSEVELRLSEEG-DGTLLELEHATTS------EQ-M-LVEVGVGWEMALDFLGMFIRGD 142 (181)
T ss_dssp EEEEBCTTSCCEEEEEEEEEET-TEEEEEEEEEESC------HH-H-HHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEcCCCCcEEEEEEEEECC-CcEEEEEEEEcCC------HH-H-HHHHHHhHHHHHHHHHHHhCCC
Confidence 9987654433457889999975 5799999876422 12 1 2356678888999999988643
No 81
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=97.80 E-value=5.4e-05 Score=68.96 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=81.1
Q ss_pred EEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 275 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 275 r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
..+..++.|+||+++||++++|.+.+++|++.... +-.+.|+..++. .+- +..+ ++++ .++++|.|.
T Consensus 11 ~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~~~~~--~d~~~Gg~~~~~----~G~----~~g~-v~e~--~p~~~l~~~ 77 (145)
T 1x53_A 11 CKITLKETFLTSPEELYRVFTTQELVQAFTHAPAT--LEADRGGKFHMV----DGN----VSGE-FTDL--VPEKHIVMK 77 (145)
T ss_dssp EEEEEEEEESSCHHHHHHHTTCHHHHHHHSCSCCB--CCCSTTCCCBBT----TTT----EECC-EEEE--ETTTEEEEE
T ss_pred cEEEEEEEECCCHHHHHHHhCCHHHHHHhcCCCce--EECCCCCEEEEE----CCe----eEEE-EEEE--eCCCEEEEE
Confidence 46889999999999999999999999999865432 222344432221 121 1222 2233 478999987
Q ss_pred EEecCC--c-eeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHH-HHHHHHHHHHhh
Q 006041 355 QVEGDF--D-SFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPS-NLCAIRDYVEKR 420 (663)
Q Consensus 355 ~VeGdF--r-~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~-~L~ALR~RAEkr 420 (663)
....+. . ....+|+|++.+ ++|+|+++...-+. .. ...+..+... +|..|++.+|..
T Consensus 78 ~~~~~~~~~~~~~v~~~l~~~~-~gT~l~~~~~~~~~------~~--~~~~~~Gw~~~~l~~L~~~le~g 138 (145)
T 1x53_A 78 WRFKSWPEGHFATITLTFIDKN-GETELCMEGRGIPA------PE--EERTRQGWQRYYFEGIKQTFGYG 138 (145)
T ss_dssp EEETTSCTTCCEEEEEECCBCS-SCEEEEEEEEEEEH------HH--HHHHHHTTHHHHHHHHHHHTCCC
T ss_pred EecCCCCCCCcEEEEEEEEECC-CCEEEEEEEECCCH------HH--HHHHHhchhHHHHHHHHHHHhcC
Confidence 654322 1 356788998875 57999998543331 11 3456677787 799999987653
No 82
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=97.77 E-value=8.6e-05 Score=68.70 Aligned_cols=82 Identities=11% Similarity=0.154 Sum_probs=60.4
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhcccccee--------------------------------------------
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC-------------------------------------------- 128 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~-------------------------------------------- 128 (663)
.-.|+.++.|++|++.||+.+||+++|++|+|.+.+
T Consensus 3 ~~~v~~s~~I~ap~e~V~~~~~D~e~~p~w~p~~~~v~~~~~~~~~~~~~~~~G~~~~~~~~~v~e~~p~~~i~~~~~~g 82 (155)
T 3ggn_A 3 ETVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDDKRSRWTVEAPAPLGTVSWEAELTADEPGKRIAWRSLPG 82 (155)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCGGGHHHHSTTCCEEEECSSSEEEEEEECCTTTCEEEEEEEEEEEETTTEEEEEECTT
T ss_pred ccEEEEEEEEcCCHHHHHHHHhCHHHhHHHhhhceEEEEecCCeeEEEEEecCCcceEEEEEEEEEecCCCEEEEEECCC
Confidence 457899999999999999999999999999999865
Q ss_pred -------------c--CCceEEEEEEEEecCCCCCHH----HHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 -------------R--SSTTTLSYEVNVIPRLNFPAI----FLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 -------------~--~~gT~LtY~v~V~P~f~vP~~----lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
. ++||.++|+++..|+..+-.. +.....++.+...|+.+++.+|.-
T Consensus 83 ~~~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~l~r~k~~~e~~ 147 (155)
T 3ggn_A 83 ARIENSGEVLFRPAPGARGTEVVVRLTYRPPGGSAGAVIARMFNQEPSQQLRDDLMRFKREQELG 147 (155)
T ss_dssp CSSCEEEEEEEEECSSSSCEEEEEEEEEC----------------CHHHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEEEEECCCCCceEEEEEEEEECCCcHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 2 248999999999987654332 334457777888888888888864
No 83
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=97.76 E-value=6.4e-05 Score=71.24 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=62.3
Q ss_pred EEEEEEEccCHHHHHHHhhCchhhhhcccccee-----------------------------------------------
Q 006041 96 IKAEMLVNADVDSVWNALTDYERLADFVPNLAC----------------------------------------------- 128 (663)
Q Consensus 96 V~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~----------------------------------------------- 128 (663)
++.+|.|++|++.||+.+.|.++|++++|+|++
T Consensus 29 ~~~si~I~ap~eeVy~~~~D~e~lP~W~~~l~~~~~~~~~~w~a~~~p~G~v~v~~~~~~~~gv~d~~~~l~~g~~~~~~ 108 (156)
T 2qpv_A 29 RIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGGLEADGEDWIAKGGPLGEVRVNFAPHNEFGVIDHVVTLPDGLKVYNA 108 (156)
T ss_dssp EEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTCCEEETTEEEEECSSSCEEEEEECCCCSSCBCCEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCHHHHHHHHHChhhHHHHHHhhhhhcccCCCcEEEeccCCCcEEEEEecCCCceEEEEEEecCCCcEEEEE
Confidence 589999999999999999999999999999962
Q ss_pred -----cCCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHH
Q 006041 129 -----RSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAE 172 (663)
Q Consensus 129 -----~~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae 172 (663)
.+.||.++|++.+.|.+.+|.+ +.-++.+...|+.+|+.+|
T Consensus 109 ~rv~p~g~GTeV~~tl~~~pg~~~~~~---~~~~~~v~~dL~~LK~l~E 154 (156)
T 2qpv_A 109 LRVTPNGSGTEVSFTLLRLEGMTDEDF---EQDASAITADLEMLKSLLE 154 (156)
T ss_dssp EEEEEETTEEEEEEEEECCTTCCHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCEEEEEEEecCCCCChhhh---hhhHHHHHHHHHHHHHHHh
Confidence 2368999999998887766655 4445568888899999887
No 84
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=97.70 E-value=0.00013 Score=68.30 Aligned_cols=85 Identities=11% Similarity=0.290 Sum_probs=69.6
Q ss_pred eEEEEEEEccCHHHHHHHhhCchh----hhhcccccee------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYER----LADFVPNLAC------------------------------------------ 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~----la~fiP~l~~------------------------------------------ 128 (663)
.|+.++.|++|+++||++++|+++ +.+|+|-...
T Consensus 8 ~v~~s~~I~ap~e~v~~lv~Dve~w~~~yp~~~p~~~~~~~~~~~~~a~l~vg~~~~~~~~~s~~~~~~~~~~I~~~~~~ 87 (161)
T 3p9v_A 8 ELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDLGNNAYRWEMEKVGVDKHAIQSVYACTYHADKEAGKITWSPIK 87 (161)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHHTTSTTEEEEEEEETTEEEEEECCBSSGGGCBCCEEEEEEEEETTTTEEEEEECT
T ss_pred EEEEEEEEcCCHHHHHHHHhChhhhHhhCCCeEEEEEcCCCceEEEEEEEeeeeEEEEEEEEEEEEEcCCCCEEEEEEec
Confidence 478899999999999999999999 5555554222
Q ss_pred ---------------cC-CceEEEEEEEEecCCCCCHH---HHHHHHhhchHHHHHHHHHHHHHhccccc
Q 006041 129 ---------------RS-STTTLSYEVNVIPRLNFPAI---FLERIIRSDLPVNLQALACRAERSFGWNQ 179 (663)
Q Consensus 129 ---------------~~-~gT~LtY~v~V~P~f~vP~~---lie~~lr~dLp~nL~Ai~~~Ae~~~~~~~ 179 (663)
.+ ++|.++|+++..+++++|.+ ++..++.+-+-.++.|+.+||..+|....
T Consensus 88 g~~~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~pl~~ll~~~~~~~~~~~~~~~v~af~~ra~~~~~~~~ 157 (161)
T 3p9v_A 88 GEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANLKKAFLEHH 157 (161)
T ss_dssp TSTTEEEEEEEEEEESSSSCEEEEEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSS
T ss_pred CccceeEEEEEEEEECCCCeEEEEEEEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23 44899999999999888866 67888888899999999999998876543
No 85
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=97.69 E-value=0.00098 Score=65.17 Aligned_cols=129 Identities=15% Similarity=0.166 Sum_probs=88.0
Q ss_pred CCeeEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCe
Q 006041 271 GGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQE 350 (663)
Q Consensus 271 ~g~~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprr 350 (663)
.+..+.+..+.+++||+++||+.|||.+.+.+|+.. +.+--+.|+..++. .. ...+ ++++ .++++
T Consensus 28 ~~~~~~l~i~R~f~Ap~e~VW~AlTdpe~l~~W~~~---~~~d~r~GG~~~~~----~~-----~~g~-v~ev--~pp~r 92 (192)
T 2luz_A 28 AGEARSIIIRQRYDAPVDEVWSACTDPNRINRWFIE---PKGDLREGGNFALQ----GN-----ASGD-ILRC--EPPRR 92 (192)
T ss_dssp TEEEEEEEEEEEESSCHHHHHHHHHCHHHHTTTSCC---EEECCSTTSEEEET----TS-----EEEE-EEEE--ETTTE
T ss_pred CCCceEEEEEEEeCCCHHHHHHHHcCHHHHheeeCC---CcccCccCcEEEee----cc-----ccce-EEEE--ecCee
Confidence 344677899999999999999999999999999975 33434455544321 11 1112 2333 47899
Q ss_pred EEEEEEecCCceeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHhhhCC
Q 006041 351 ISFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGD 423 (663)
Q Consensus 351 Isfr~VeGdFr~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEkr~a~ 423 (663)
|.|.....+-....-+|+|++.++ +|+|++.....+ .... ..+..+-...|..|+..++....+
T Consensus 93 L~~tw~~~~~~~~~vt~~L~~~g~-gT~Ltl~h~~~~-------~~~~-~~~~~GW~~~Ld~L~~~L~g~~p~ 156 (192)
T 2luz_A 93 LTISWVYEGKPDSEVELRLSEEGD-GTLLELEHATTS-------EQML-VEVGVGWEMALDFLGMFIRGDLPG 156 (192)
T ss_dssp EEEEEEESSSCEEEEEEEEEEETT-EEEEEEEEEESC-------HHHH-HHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred EEEEEeecCCCCceEEEEEEEcCC-cEEEEEEEECCC-------HHHH-HHHhccHHHHHHHHHHHhCCCCCC
Confidence 998865544345567899999875 699998876432 2222 234557788999999998865444
No 86
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=97.64 E-value=0.00042 Score=64.40 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=85.5
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcC-C------cEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCC
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPN-L------AISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHE 348 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~-V------~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pp 348 (663)
.|..++.|+||++.||+++|| .+.+|++. . ..+++- +.|+.. . ..+-++..+. .. .++++ .++
T Consensus 5 ~i~~~r~~~Ap~e~Vw~A~Td--~l~~W~~p~~~~~~~~~~~~~d-r~GG~~-~-~~~~~G~~~~--~g-~v~ev--~pp 74 (155)
T 1zxf_A 5 FVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVD-KKGGRW-Y-EIDEQGEEHT--FG-LIRKV--DEP 74 (155)
T ss_dssp CEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEE-TTTTEE-E-CCCTTTSCCC--CE-EEEEE--ETT
T ss_pred eEEEEEEEeCCHHHHHHHHHh--hHHhhcCCCccccCCCceEEEE-CCCCEE-E-EECCCCCeEe--EE-EEEEE--CCC
Confidence 378889999999999999999 48888742 1 234555 666654 2 2222221111 11 23333 488
Q ss_pred CeEEEEEEe-cCC-----ceeEEEEEEEEcCCCeEEEEEEEEEEeccCccch--HHHHHHHHHhhHHHHHHHHHHHHHhh
Q 006041 349 QEISFEQVE-GDF-----DSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLS--EAIMEEVIYEDLPSNLCAIRDYVEKR 420 (663)
Q Consensus 349 rrIsfr~Ve-GdF-----r~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP--~~L~er~vre~L~~~L~ALR~RAEkr 420 (663)
++|.|.-.. ++. ....-+|+|++.++|+|+|+.....-. ..-+ ...+...+..+-...|..|++.+++.
T Consensus 75 ~rl~~tw~~~~~~~~~~~~~s~vt~~l~~~~~g~T~ltl~~~~~~---~~~~~~~~~~~~~~~~GW~~~l~~L~~~l~~~ 151 (155)
T 1zxf_A 75 DTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHFD---RMGTKHAKRVRNGMDKGWPTILQSFQDKIDEE 151 (155)
T ss_dssp TEEEEECCCSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSST---TSCHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCCCCCcEEEEEEEEECCCCcEEEEEEEeccc---ccccchhHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 999988432 211 235678999999877799988765211 1112 23445566678899999999999876
Q ss_pred hCC
Q 006041 421 EGD 423 (663)
Q Consensus 421 ~a~ 423 (663)
.+.
T Consensus 152 ~a~ 154 (155)
T 1zxf_A 152 GAK 154 (155)
T ss_dssp HTT
T ss_pred hcc
Confidence 553
No 87
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=97.62 E-value=0.00018 Score=78.73 Aligned_cols=105 Identities=14% Similarity=0.197 Sum_probs=81.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCC---EEEEEEEeccceeEEEEEEEEEEEEee-eCCCeE
Q 006041 276 CVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENN---KVRILQEGCKGLLYMVLHARVVMDICE-QHEQEI 351 (663)
Q Consensus 276 ~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn---~vrv~q~g~~gll~~~~~~rvVLDV~E-~pprrI 351 (663)
.++.+.+|+||+++||+..+|.+++++|+|....++++...+. +..++. ..+ ++.|++++ +.++ .+++++
T Consensus 2 ~~~~~~~i~~p~~~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~~~--~~~--~~~w~~~~--~~t~~~~~~~F 75 (516)
T 3oh8_A 2 SLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFS--LPA--GLKWVARH--DLSGFLNGSRF 75 (516)
T ss_dssp CEEEEEEESSCHHHHHHHHHSTTHHHHHSCTTSSCEECSCCSCSSSCEEEEE--CST--TCEEEEEE--CGGGCBTTTEE
T ss_pred eEEEEEEccCCHHHHHHHhcCcchHHHhCCCCCceEEecCCCCCcCCeEEEe--cCC--CcEEEEEE--ccccccCCCeE
Confidence 4678899999999999999999999999999999999864332 122222 211 25566652 1144 467999
Q ss_pred EEEEEecC---CceeEEEEEEEEcCCCeEEEEEEEEEEe
Q 006041 352 SFEQVEGD---FDSFQGKWLFEQLGSHHTLLKYSVESKM 387 (663)
Q Consensus 352 sfr~VeGd---Fr~f~G~WtLeplgdGgTrVtYtve~eP 387 (663)
.++++.|+ |+.+.-++.|++.++ +|+++..+++..
T Consensus 76 ~d~~~~gp~~~~~~w~h~h~f~~~~~-gt~~~d~~~~~~ 113 (516)
T 3oh8_A 76 TDVCLTAPVKALANWRHVHNFVDQDG-GTLITDSVSTRL 113 (516)
T ss_dssp EEECCSCSSGGGSSCEEEEEEEEETT-EEEEEEEEECSS
T ss_pred EEEeccCcccceeeeEEEEEEEEcCC-CcEEEEEEEeeC
Confidence 99999999 889999999999876 699999999875
No 88
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=97.56 E-value=0.00023 Score=66.99 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=81.8
Q ss_pred eEEEEEEEEEcCCHHHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEE
Q 006041 274 HRCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISF 353 (663)
Q Consensus 274 ~r~VrasIvI~APpeqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsf 353 (663)
.+.+..++.|+||+++||++++|-+.+..|++. ..+++--+.|+...+. .+. +... ++++ .++++|.|
T Consensus 18 ~~~i~~~r~~~ap~e~Vw~A~Tdpe~l~~W~~g-~~~~~d~~~GG~~~~~----~G~----~~g~-v~ev--~p~~rlv~ 85 (158)
T 3ni8_A 18 GMSFEITEEYYVPPEVLFNAFTDAYTLTRLSRG-SLAEVDLKVGGKFSLF----SGS----ILGE-FTEI--TKPHKIVE 85 (158)
T ss_dssp CCCEEEEEEESSCHHHHHHHHHCHHHHHHHTTT-SCCEECCSTTCEEEET----TTT----EEEE-EEEE--ETTTEEEE
T ss_pred CceEEEEEEECCCHHHHHHHhcCHHHHHhhcCC-CccEEEccCCCEEEEe----cCC----EEEE-EEEE--eCCcEEEE
Confidence 345888999999999999999999999999983 2233334455554332 121 1222 2233 47899987
Q ss_pred EEEecCCc---eeEEEEEEEEcCCCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHH-HHHHHHHHHH
Q 006041 354 EQVEGDFD---SFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPS-NLCAIRDYVE 418 (663)
Q Consensus 354 r~VeGdFr---~f~G~WtLeplgdGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~-~L~ALR~RAE 418 (663)
...-.+.. ...-+|+|++.++++|+|+++..--|........ ........+-.. +|..|++.++
T Consensus 86 tw~~~~~~~~~~s~vt~~l~~~~~~~T~ltl~~~g~~~~~~~~~~-~~~~~~~~GW~~~~L~~Lk~~Le 153 (158)
T 3ni8_A 86 KWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEG-GVLERCKNGWTQNFLHNIEVILG 153 (158)
T ss_dssp EEEETTSCSSCCEEEEEEEEEEETTEEEEEEEEECCCSSCTTCCC-CHHHHHHHHHHHTHHHHHHHTSC
T ss_pred EEEecCCCCCCcEEEEEEEEecCCCCEEEEEEEEccCchhhhccc-hhHHHHHhChhHHHHHHHHHHhC
Confidence 65432221 3577899999655689999977633321100100 012345567777 5888887755
No 89
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=97.46 E-value=0.00032 Score=66.40 Aligned_cols=88 Identities=15% Similarity=0.237 Sum_probs=67.0
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee----------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC---------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~---------------------------------------------- 128 (663)
+|..++.|+||++.||++|+|++++ ++.|.+.+
T Consensus 3 ~v~~si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~gg~v~Erl~~~D~~~~~~sY~ii~g~l 81 (160)
T 3p51_A 3 KVYNSIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLLNGEFLDTLIAYSEIERRIMYSMDEGPS 81 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEETTTEEEEEEEEETTTTEEEEEEEECST
T ss_pred EEEEEEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEECCEEEEEEEEEcCCCcEEEEEEecCCC
Confidence 5899999999999999999999999 99997654
Q ss_pred -------------------c-CCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHhccccccccccccc
Q 006041 129 -------------------R-SSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERSFGWNQKIPMIKNS 187 (663)
Q Consensus 129 -------------------~-~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~~~~~~~~~~~~~~ 187 (663)
. ++||.++|+.++.|.- .+....++.-...+|.+|++++|+.-.+..++.++|.|
T Consensus 82 ~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~~----~~~~~~~~~~~~~~L~~Lk~~~e~~~~~~~~~~~~~~~ 156 (160)
T 3p51_A 82 PVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESAS----TEAVEYMNTVYRSLLADLAAEFTSESRRSEWIDQLEHH 156 (160)
T ss_dssp TSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESC----SHHHHHHHHHHHHHHHHHHHHSCTTTCC----------
T ss_pred cccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeCH----HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHhhhc
Confidence 1 3678899999888863 27788889999999999999999876666667666654
No 90
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=97.44 E-value=0.001 Score=64.06 Aligned_cols=95 Identities=7% Similarity=-0.012 Sum_probs=82.0
Q ss_pred CCceEEEEEEccC-CcceEEEEEEEc-cCHHHHHHHhhCchhhhhcccccee----------------------------
Q 006041 79 QRKVHCEVEVVSW-RERRIKAEMLVN-ADVDSVWNALTDYERLADFVPNLAC---------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~-~~rrV~a~i~i~-ap~e~VW~vLTDYe~la~fiP~l~~---------------------------- 128 (663)
.++|.|-....+. +...+.+...|+ ++++.|+++|.|.+...++.|++.+
T Consensus 36 ~~~v~v~~~~~~~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~~~~~i~~~~~~~p~p~~~RD~v 115 (214)
T 1ln1_A 36 TSGISIYRLLDKKTGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELYEQECNGETVVYWEVKYPFPMSNRDYV 115 (214)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEETTEEEEEEEECCCTTSCCEEEE
T ss_pred CCCeEEEEeccCCCCcEEEEEEEEECCCCHHHHHHHHcCHHHHHHHHHHHhhEEEeccCCCEEEEEEEEcCCCCCCceEE
Confidence 3457777665543 346689999995 9999999999999999988888766
Q ss_pred -------------------------------------------------cCCceEEEEEEEEecCCCCCHHHHHHHHhhc
Q 006041 129 -------------------------------------------------RSSTTTLSYEVNVIPRLNFPAIFLERIIRSD 159 (663)
Q Consensus 129 -------------------------------------------------~~~gT~LtY~v~V~P~f~vP~~lie~~lr~d 159 (663)
.+++|.++|.+.+.|+.++|..++...+.+.
T Consensus 116 ~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~~~~Dp~G~iP~~l~n~~~~~~ 195 (214)
T 1ln1_A 116 YLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAKNG 195 (214)
T ss_dssp EEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCSSCCCHHHHHHHHHTH
T ss_pred EEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEEEEECCCCcccHHHHHHHHHHH
Confidence 2467999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 006041 160 LPVNLQALACRAER 173 (663)
Q Consensus 160 Lp~nL~Ai~~~Ae~ 173 (663)
++..|+.|++++++
T Consensus 196 ~~~~l~~l~k~~~~ 209 (214)
T 1ln1_A 196 VPNFLKDMARACQN 209 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh
Confidence 99999999999974
No 91
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=97.26 E-value=0.0016 Score=63.63 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=81.8
Q ss_pred CCceEEEEEEccCCcceEEEEEEEccCHHHHHHHh-hCchhhhhcccccee-----------------------------
Q 006041 79 QRKVHCEVEVVSWRERRIKAEMLVNADVDSVWNAL-TDYERLADFVPNLAC----------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~~~rrV~a~i~i~ap~e~VW~vL-TDYe~la~fiP~l~~----------------------------- 128 (663)
.++|.|-....+..-.-+.+...|++|++.||++| .|.+...+..+++.+
T Consensus 40 ~~gv~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~y~~~~~~~~~~v~~R 119 (221)
T 3p0l_A 40 DNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPR 119 (221)
T ss_dssp TTSCEEEEEECSSSCEEEEEEEEESSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEECSSSEEEEEEEECC---CCSCCE
T ss_pred CCCcEEEEEEcCCCceEEEEEEEEcCCHHHHHHHHHhccchhhhcCcchheEEEEEecCCCeEEEEEeeccccCCccCCc
Confidence 45677777777654466899999999999999998 699999999888887
Q ss_pred -----------------------------------------------cC-C--ceEEEEEEEEecCCCCCHHHHHHHHhh
Q 006041 129 -----------------------------------------------RS-S--TTTLSYEVNVIPRLNFPAIFLERIIRS 158 (663)
Q Consensus 129 -----------------------------------------------~~-~--gT~LtY~v~V~P~f~vP~~lie~~lr~ 158 (663)
.+ + +|.++|.+++.|+.++|..++.+.+.+
T Consensus 120 Dfv~~r~~~~~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~ 199 (221)
T 3p0l_A 120 DFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSIINQVLSQ 199 (221)
T ss_dssp EEEEEEEEEECSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECCSSCCHHHHHHHHHH
T ss_pred eEEEEEEEEEcCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCCCCCCHHHHHHHHHH
Confidence 12 3 699999999999999999999999999
Q ss_pred chHHHHHHHHHHHH
Q 006041 159 DLPVNLQALACRAE 172 (663)
Q Consensus 159 dLp~nL~Ai~~~Ae 172 (663)
.++..|.+||++++
T Consensus 200 ~~~~~~~~Lr~~~~ 213 (221)
T 3p0l_A 200 TQVDFANHLRKRLE 213 (221)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999886
No 92
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=96.54 E-value=0.011 Score=52.08 Aligned_cols=31 Identities=23% Similarity=0.552 Sum_probs=28.6
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhcc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFV 123 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fi 123 (663)
...|..++.|+||++.||++|||.++++++.
T Consensus 4 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~ 34 (146)
T 2leq_A 4 KLIAQVKTVINAPIEKVWEALVNPEIIKEYM 34 (146)
T ss_dssp CEEEEEEEEECSCHHHHHHHHSCTTHHHHHS
T ss_pred CceEEEEEEECCCHHHHHHHHcCHHHhceeE
Confidence 4579999999999999999999999999985
No 93
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=96.53 E-value=0.026 Score=55.20 Aligned_cols=96 Identities=10% Similarity=0.060 Sum_probs=78.1
Q ss_pred CCceEEEEEEccC-CcceEEEEEEEccCHHHHHHHh--hCchhhhhcccccee---------------------------
Q 006041 79 QRKVHCEVEVVSW-RERRIKAEMLVNADVDSVWNAL--TDYERLADFVPNLAC--------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~-~~rrV~a~i~i~ap~e~VW~vL--TDYe~la~fiP~l~~--------------------------- 128 (663)
.++|.|-....+. .-..+.+...|+++++.|+++| .|.+.-.+..+++.+
T Consensus 51 ~~gv~v~~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i~~~~~i~~~~~~~~~~~~v~ 130 (231)
T 2r55_A 51 GNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLIS 130 (231)
T ss_dssp CSSEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSSEEEEEEECCCBTTTTBC
T ss_pred CCCEEEEEEccCCCCCcEEEEEEEECCCHHHHHHHHHhhCcchhhhhccccceeEEEEEcCCCEEEEEEEeccccCCccC
Confidence 4556666655532 3355888999999999999999 778877777777666
Q ss_pred ---------------------------------------------------c--CCceEEEEEEEEecCCCCCHHHHHHH
Q 006041 129 ---------------------------------------------------R--SSTTTLSYEVNVIPRLNFPAIFLERI 155 (663)
Q Consensus 129 ---------------------------------------------------~--~~gT~LtY~v~V~P~f~vP~~lie~~ 155 (663)
. +++|.++|.+.+.|+.++|..++...
T Consensus 131 ~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~ 210 (231)
T 2r55_A 131 PRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSF 210 (231)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSSCCHHHHHHH
T ss_pred CCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCCCccHHHHHHH
Confidence 1 35799999999999999999999999
Q ss_pred HhhchHHHHHHHHHHHHHh
Q 006041 156 IRSDLPVNLQALACRAERS 174 (663)
Q Consensus 156 lr~dLp~nL~Ai~~~Ae~~ 174 (663)
+.+.++..+.+|++.+++.
T Consensus 211 ~~~~~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 211 FPRSMTRFYANLQKAVKQF 229 (231)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred HhHhHHHHHHHHHHHHHHh
Confidence 9999999999999999864
No 94
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=96.53 E-value=0.019 Score=56.25 Aligned_cols=95 Identities=9% Similarity=0.097 Sum_probs=79.5
Q ss_pred CceEEEEEEccCCcceEEEEEEEccCHHHHH-HHhhCchhhhhcccccee------------------------------
Q 006041 80 RKVHCEVEVVSWRERRIKAEMLVNADVDSVW-NALTDYERLADFVPNLAC------------------------------ 128 (663)
Q Consensus 80 ~~V~v~~e~l~~~~rrV~a~i~i~ap~e~VW-~vLTDYe~la~fiP~l~~------------------------------ 128 (663)
+++.|-....+.......+...|+++++.|+ .++.|.+...+..+++.+
T Consensus 52 ~g~~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~~~~~~p~~~~~~~~RD 131 (229)
T 1em2_A 52 YGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRD 131 (229)
T ss_dssp TCCEEEEEEETTTEEEEEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTEEEEEEEECCBTTTTBCCEE
T ss_pred CCCEEEEEecCCCCceEEEEEEecCCHHHHHHHHHhCccchhhcccccceEEEEEecCCCeEEEEEEecCcCCCCcCCCe
Confidence 4566655555532235677888899999999 899999999888888877
Q ss_pred --------------------------------------------c-----CCceEEEEEEEEecCCCCCHHHHHHHHhhc
Q 006041 129 --------------------------------------------R-----SSTTTLSYEVNVIPRLNFPAIFLERIIRSD 159 (663)
Q Consensus 129 --------------------------------------------~-----~~gT~LtY~v~V~P~f~vP~~lie~~lr~d 159 (663)
+ +++|.++|.+.+.|+.++|..+++..+.+.
T Consensus 132 fv~~r~~~~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~l~n~~~~~~ 211 (229)
T 1em2_A 132 FVNVRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAAT 211 (229)
T ss_dssp EEEEEEEEECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSSSCHHHHHHHHHHH
T ss_pred eEEEEEEEEcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 1 366999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHh
Q 006041 160 LPVNLQALACRAERS 174 (663)
Q Consensus 160 Lp~nL~Ai~~~Ae~~ 174 (663)
++..+..||+.+++.
T Consensus 212 ~~~~~~~Lr~~~~~~ 226 (229)
T 1em2_A 212 MFEFAFHLRQRISEL 226 (229)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999865
No 95
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=96.49 E-value=0.02 Score=55.74 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=65.5
Q ss_pred EEEEEEEccCHHHHHHHhhCchhhhhcccccee-----------------------------------------------
Q 006041 96 IKAEMLVNADVDSVWNALTDYERLADFVPNLAC----------------------------------------------- 128 (663)
Q Consensus 96 V~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~----------------------------------------------- 128 (663)
......|+||+++||+++.|++++..+.|.+.+
T Consensus 29 ~~v~~~I~Apa~~VW~~v~df~~l~~w~P~V~s~~~eG~~ggvGsvR~lt~~~G~p~~~vkErL~~~D~~~~~~sY~Iie 108 (183)
T 3rt2_A 29 STLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQGKKLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVG 108 (183)
T ss_dssp EEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEEESSSCCCTTCEEEEEECCSSTTCEEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHhCcCchhhcCccceEEEeeCCCCCCCcEEEEEeCCCCccceEEEEEEEEECCCCEEEEEEec
Confidence 334448999999999999999999999998766
Q ss_pred -----------------c-CC--ceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHhc
Q 006041 129 -----------------R-SS--TTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERSF 175 (663)
Q Consensus 129 -----------------~-~~--gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~~ 175 (663)
. .+ +|.+.++.++.|.-....--....+..=...||++|++.+|++-
T Consensus 109 g~lp~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~g~~~e~~~~~~~~i~~~~L~~L~~~~e~~~ 175 (183)
T 3rt2_A 109 GDHRLKNYSSTISLHSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTERLQ 175 (183)
T ss_dssp ESCSCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 23 59999999998766666666777778888899999999999863
No 96
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=96.34 E-value=0.013 Score=53.82 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=31.3
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhccccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVPNL 126 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l 126 (663)
....|..++.|+||++.||++|||-+++++++|..
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~ 41 (160)
T 2lak_A 7 ESFVVRREAHLAAPPAAVFALMTDPEKILRWMGTE 41 (160)
T ss_dssp SCCEEEEEEEESSCHHHHHHHHHCHHHHHHTSCSS
T ss_pred CCceEEEEEEeCCCHHHHHHHhcChHHHhhhCCCc
Confidence 45679999999999999999999999999988764
No 97
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=96.30 E-value=0.016 Score=56.91 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=76.9
Q ss_pred CCceEEEEEEccC-CcceEEEEEEEccCHHHHHHHhhCchhhhhcccccee-----------------------------
Q 006041 79 QRKVHCEVEVVSW-RERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC----------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~-~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~----------------------------- 128 (663)
.++|.|-...... .-....+...|++|++.|+++|.|-+.-.+..+++.+
T Consensus 51 ~~gv~vy~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id~~~~I~y~~~~~~~~~~v~~R 130 (224)
T 1jss_A 51 AKDVTVWRKPSEEFNGYLYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENCCVMRYTTAGQLLNIISPR 130 (224)
T ss_dssp ETTEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTEEEEEEEECCBTTTTBCCE
T ss_pred CCCEEEEEEeccCCCceEEEEEEEEeCCHHHHHHHHhCcccccccccceeeEEEEEEcCCCeEEEEEEcccccCCCCCCC
Confidence 4678777764433 3355789999999999999999996655666666665
Q ss_pred ---------------------------------------------cC---CceEEEEEEEEecCCCCCHHHHHHHHhhch
Q 006041 129 ---------------------------------------------RS---STTTLSYEVNVIPRLNFPAIFLERIIRSDL 160 (663)
Q Consensus 129 ---------------------------------------------~~---~gT~LtY~v~V~P~f~vP~~lie~~lr~dL 160 (663)
.+ +.|.++|.+++.|+.++|..++++.+.+-+
T Consensus 131 Dfv~~r~~~~~~~~~vi~~~Sv~hp~~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~ 210 (224)
T 1jss_A 131 EFVDFSYTVGYEEGLLSCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMIPQSAVDTAMASTL 210 (224)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCCCCCCTTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEEEEcCCeEEEEEeeeecCCCCCCCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCCCCccHHHHHHHHHHhH
Confidence 11 369999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 006041 161 PVNLQALACRAER 173 (663)
Q Consensus 161 p~nL~Ai~~~Ae~ 173 (663)
..-+.+||+.+++
T Consensus 211 ~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 211 ANFYSDLRKGLRK 223 (224)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988753
No 98
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=96.29 E-value=0.029 Score=55.73 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=63.3
Q ss_pred CcceEEEEE--EEccCHHHHHHHhhCchhhhhcccccee-----------------------------------------
Q 006041 92 RERRIKAEM--LVNADVDSVWNALTDYERLADFVPNLAC----------------------------------------- 128 (663)
Q Consensus 92 ~~rrV~a~i--~i~ap~e~VW~vLTDYe~la~fiP~l~~----------------------------------------- 128 (663)
....+...| .|+||+++||+++.|++++..+.|.+.+
T Consensus 48 ~~~k~~~~V~~~I~ApadkVW~lV~Df~~l~kW~P~V~s~eveGdg~vGsVR~vt~~~G~p~~~vkErL~~lDde~~~~s 127 (205)
T 3oqu_A 48 RENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTVIGDPEIGSLREVNVKSGLPATTSTERLELLDDEEHILG 127 (205)
T ss_dssp CTTEEEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCSSCCTTCEEEEEECTTSSCSEEEEEEEEEETTTTEEE
T ss_pred CCcEEEEEEeeEEcCCHHHHHHHHhCcCChhHcCccceEEEeeCCCCCCcEEEEEEcCCCccceEEEEEEEEECCCCEEE
Confidence 345699999 9999999999999999999999998776
Q ss_pred ---------------------cC--C--ceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ---------------------RS--S--TTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ---------------------~~--~--gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
.+ + +|.+.+...+.|.-....--....+..=...||++|++.+|++
T Consensus 128 YsIieG~lpv~~Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~g~t~e~~~~~v~~v~~~gL~~L~~~~e~~ 198 (205)
T 3oqu_A 128 IKIIGGDHRLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSERL 198 (205)
T ss_dssp EEEEEESSSCTTCEEEEEEEEECCCC-CEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcceeEEEEEEEEEEccCCCCceEEEEEEEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1 3555555555554444444566677777889999999999986
No 99
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=96.18 E-value=0.042 Score=54.69 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=79.9
Q ss_pred CCceEEEEEEccCCc---ceEEEEEEEc-cCHHHHHHHhhCchhhhhcccccee--------------------------
Q 006041 79 QRKVHCEVEVVSWRE---RRIKAEMLVN-ADVDSVWNALTDYERLADFVPNLAC-------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~~~---rrV~a~i~i~-ap~e~VW~vLTDYe~la~fiP~l~~-------------------------- 128 (663)
.++|.|-....+... +.+.+...+. ++++.|+++|.|.+...+..|++.+
T Consensus 55 ~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~i~~~~~i~y~~~~~p~p~s~ 134 (255)
T 2e3n_A 55 EGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPASQ 134 (255)
T ss_dssp ETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEEEETTEEEEEEEECCCTTSCC
T ss_pred CCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcchHhhhhhhcceeEEEEEcCCCCEEEEEEeecCCCcCC
Confidence 456777666544333 2467766665 9999999999999999888888776
Q ss_pred --------------------------------------------c---------------C--------CceEEEEEEEE
Q 006041 129 --------------------------------------------R---------------S--------STTTLSYEVNV 141 (663)
Q Consensus 129 --------------------------------------------~---------------~--------~gT~LtY~v~V 141 (663)
. + ++|.++|.+.+
T Consensus 135 RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~~~~ 214 (255)
T 2e3n_A 135 RDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANV 214 (255)
T ss_dssp EEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEE
T ss_pred ceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEEEEe
Confidence 1 1 36899999999
Q ss_pred ecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHhcc
Q 006041 142 IPRLNFPAIFLERIIRSDLPVNLQALACRAERSFG 176 (663)
Q Consensus 142 ~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~~~ 176 (663)
.|+.++|..++...+.+.+|..|+.|++++++.++
T Consensus 215 Dp~G~iP~~lvn~~~~~~~~~~l~~L~k~v~~~~~ 249 (255)
T 2e3n_A 215 NPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTA 249 (255)
T ss_dssp ECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHhccccHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999987644
No 100
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=95.89 E-value=0.026 Score=50.59 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=57.4
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhcccccee--------------------------------------------
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC-------------------------------------------- 128 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~-------------------------------------------- 128 (663)
...|..++.|+||++.||++|||.+++++++|.+..
T Consensus 7 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~~~~~~G~~~~~~~~~g~~~~~v~e~~p~~~l~~~~~~~~~~~~~~ 86 (143)
T 1xn6_A 7 LNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPNDFVLEVGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTDGWVVSFD 86 (143)
T ss_dssp CCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCCBCCCCCTTCEECBCCTTCCCCEEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEEEcCCHHHHHHHHhCHhHHHHhcCCCCcCcCCCCEEEEEEcCCCceEEEEEEeCCCEEEEEEeCCCEEEEEE
Confidence 456999999999999999999999999998885321
Q ss_pred ---cCC-ceEEEEEEEEecCC--CCCH------HHHHHHHhhchHHHH-HHHHHHHH
Q 006041 129 ---RSS-TTTLSYEVNVIPRL--NFPA------IFLERIIRSDLPVNL-QALACRAE 172 (663)
Q Consensus 129 ---~~~-gT~LtY~v~V~P~f--~vP~------~lie~~lr~dLp~nL-~Ai~~~Ae 172 (663)
.++ +|+|+|+....+.. ..|. ... ..+..--...| ..|++.+|
T Consensus 87 l~~~~~g~T~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gw~~~l~~~L~~~le 142 (143)
T 1xn6_A 87 LKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIR-DRMSGGWVAIVNEKLKKVVE 142 (143)
T ss_dssp EEEEETTEEEEEEEEECCCSTTCBCTTTCSBHHHHH-HHHHHHHHHHHTTHHHHHHH
T ss_pred EEECCCCcEEEEEEEEccCccccccccccchhhHHH-HHHHHhHHHHHHHHHHHHhc
Confidence 124 78888887766644 2232 233 35666777777 77777665
No 101
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=95.39 E-value=0.076 Score=47.29 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=53.4
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccc-cee---------------------------------------------
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPN-LAC--------------------------------------------- 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~-l~~--------------------------------------------- 128 (663)
+|..++.|+||++.||++|||-++++++.+. ...
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~Gg~~~~~~~~~~~~~~~~v~~~~p~~~l~~~~~~g~~~~~l 81 (135)
T 3q6a_A 2 DIITKMQVDVPRETVFEAFVDPEKIGGFWFSSSSERWEQGKTITLRYEEYDAELNINIERVEDNQLIAFTWGAHPITIQF 81 (135)
T ss_dssp CEEEEEEESSCHHHHHHHHHCTTTGGGTSSSEESSCCCTTCEEEEECGGGTC-CEEEEEEEETTTEEEEEETTEEEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHcCHHHhcccCCCCCcccccCCCEEEEEEcCcCceEEEEEEEEcCCCEEEEEEcCCeEEEEE
Confidence 4788999999999999999999999997543 211
Q ss_pred --cCCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHH
Q 006041 129 --RSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAER 173 (663)
Q Consensus 129 --~~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~ 173 (663)
.+++|+|+++-.-.|... ... -..+..--...|..|++.+|.
T Consensus 82 ~~~~~gT~l~~~~~~~~~~~--~~~-~~~~~~GW~~~l~~L~~~le~ 125 (135)
T 3q6a_A 82 EESEAGTVVTTTEKDFDTQD--VKQ-LLGQKEGWVYMLSCLKVYLEH 125 (135)
T ss_dssp EEETTEEEEEEEECCCCSSC--HHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEEEEcCCCcch--HHH-HhhchhCHHHHHHHHHHHHhc
Confidence 236677777655433322 111 134666777888888888886
No 102
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=95.17 E-value=0.12 Score=48.54 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=30.1
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
+.+.|..++.|+||++.||++|||-++|+++++
T Consensus 20 ~~~~i~~~r~i~Ap~e~Vw~altdpe~~~~W~~ 52 (178)
T 1xuv_A 20 GKQEIIITREFDAPRELVFKAFTDPDLYTQWIG 52 (178)
T ss_dssp TCSEEEEEEEESSCHHHHHHHHHCHHHHTTTCS
T ss_pred CCcEEEEEEEECCCHHHHHHHhCCHHHHHhCCC
Confidence 556799999999999999999999999999975
No 103
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=95.10 E-value=0.11 Score=51.63 Aligned_cols=33 Identities=12% Similarity=0.283 Sum_probs=28.8
Q ss_pred EEEEEEEccCHHHHHHHhhCchhhhhcccccee
Q 006041 96 IKAEMLVNADVDSVWNALTDYERLADFVPNLAC 128 (663)
Q Consensus 96 V~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~ 128 (663)
......|+||+++||+++.|++++..+.|.+.+
T Consensus 56 ~~v~~~I~ApadkVW~lv~Df~~l~~w~p~V~s 88 (208)
T 3jrs_A 56 SLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKS 88 (208)
T ss_dssp EEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEE
T ss_pred EEEEEEEeCCHHHHHHHHhCcCChhHccccceE
Confidence 344458999999999999999999999998876
No 104
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=94.89 E-value=0.18 Score=49.27 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=64.5
Q ss_pred cceEEEEE--EEccCHHHHHHHhhCchhhhhcccccee------------------------------------------
Q 006041 93 ERRIKAEM--LVNADVDSVWNALTDYERLADFVPNLAC------------------------------------------ 128 (663)
Q Consensus 93 ~rrV~a~i--~i~ap~e~VW~vLTDYe~la~fiP~l~~------------------------------------------ 128 (663)
.++....+ .|+||++.||+++.|++++..+.|.+.+
T Consensus 32 ~~~~~~~~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G~p~~~vkErL~~iD~~~~~~s 111 (190)
T 3kl1_A 32 PTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLS 111 (190)
T ss_dssp TTEEEEEEEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESSSSTTCEEEEEECSSSSCEEEEEEEEEEETTTTEEE
T ss_pred CCceeEEEEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcCCCCCCeEEEEEecCCCccceEEEEEEEEeccCCEEE
Confidence 34444444 8999999999999999998777777766
Q ss_pred ----------------------c-----CCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHHh
Q 006041 129 ----------------------R-----SSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERS 174 (663)
Q Consensus 129 ----------------------~-----~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~~ 174 (663)
. +++|.+.|+.++.|.-..-.--....+..=...+|.+|++.+|+.
T Consensus 112 Y~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~g~~~e~~~~~~~~~~~~gL~~L~~~~e~~ 184 (190)
T 3kl1_A 112 FRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 184 (190)
T ss_dssp EEEEEESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 246899999999976665555556667777789999999999985
No 105
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.08 E-value=0.87 Score=42.17 Aligned_cols=122 Identities=10% Similarity=0.101 Sum_probs=70.4
Q ss_pred EEEEEEEEcCCH-HHHHHHHhccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEE
Q 006041 276 CVVASITVKAPV-SEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFE 354 (663)
Q Consensus 276 ~VrasIvI~APp-eqVWaVLTDyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr 354 (663)
+|..++.|+||+ +.||++|++.+.+.+|+..-. . ..|+...+..-+. + ...++ ++++ .++++|+|+
T Consensus 5 ~i~~e~~i~A~~~~~VW~~IStPegL~~Wfad~v--~---~~g~~~~F~w~~~-~----~~~~~-v~~~--~~~~~i~Fr 71 (136)
T 2lio_A 5 KIHLEYLLNATSKNILWSAISTPTGLEDWFADKV--V---SDDKTVTFCWGKT-E----QRQAG-IVAI--RAYSFIRFH 71 (136)
T ss_dssp EEEEEEEECTTSCTHHHHGGGSHHHHTTTSSSEE--E---EETTEEEEESSSS-S----EEEEE-EEEE--ETTTEEEEE
T ss_pred cEEEEEEecCChHHHHHHHhCChhhhhcccCCCC--c---ccCceEEEEeCCC-C----cEeEE-EEEE--cCCCEEEEE
Confidence 588899999999 999999999999999997632 1 2444434322111 1 12232 2222 478999999
Q ss_pred EEecCCceeEEEEEEEEcC-CCeEEEEEEEEEEeccCccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 355 QVEGDFDSFQGKWLFEQLG-SHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 355 ~VeGdFr~f~G~WtLeplg-dGgTrVtYtve~eP~~gg~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
-..-.-....-..+++..+ .++|.|+.+ .|. -+.. .+. ....=...|..||+.++.
T Consensus 72 W~~~~~~~~~~e~~l~~~~~t~~~~L~vt-dFa------~~~~-~e~-~~~gW~~~l~~Lk~~lg~ 128 (136)
T 2lio_A 72 WLDDENERDYFEIKMSYNELTGDYVLEIT-DFS------EADE-ADD-LKELWDSQVSKLRRTCGF 128 (136)
T ss_dssp ESSSSSSSCEEEEEEEECTTTSCEEEEEE-EEE------CHHH-HHH-HHHHHHHHHHHHHHHTSC
T ss_pred ccCCCCCceEEEEEEEecCCCCcEEEEEe-cCC------Cccc-hhH-HHhhHHHHHHHHHHHhhh
Confidence 7652211222233444432 135777666 332 1122 222 445555667777776544
No 106
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=93.77 E-value=0.39 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=28.6
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
.+.|..++.|+||++.||++|||-++++++++
T Consensus 13 ~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~ 44 (171)
T 2il5_A 13 HVEVEIEKLYKFSPELVYEAWTKKDLLKQWFM 44 (171)
T ss_dssp EEEEEEEEEESSCHHHHHHHTTCHHHHTTTSS
T ss_pred CceEEEEEEeCCCHHHHHHHHCCHHHHHhccC
Confidence 35699999999999999999999888888874
No 107
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=93.44 E-value=0.044 Score=55.05 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred ceEEEEE--EEccCHHHHHHHhhCchhhhhcccccee-------------------------------------------
Q 006041 94 RRIKAEM--LVNADVDSVWNALTDYERLADFVPNLAC------------------------------------------- 128 (663)
Q Consensus 94 rrV~a~i--~i~ap~e~VW~vLTDYe~la~fiP~l~~------------------------------------------- 128 (663)
+++...+ .|+||++.||+++.|++++..+.|.+.+
T Consensus 76 ~~~~~~v~~~I~ApadkVW~lv~Df~~pk~w~p~I~s~el~eGdg~gvGSVR~lt~~~G~p~~~vkErLe~iDde~~~~s 155 (223)
T 3qrz_A 76 DQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLREVMVVSGLPAVSSTERLEILDEERHVIS 155 (223)
T ss_dssp TCEEECCCCCCSSCHHHHHHHHHCCSSGGGTCSSCCCCCCCC---CCSSCCCCCCC---CCCCCCCCCCSEEETTTTEEE
T ss_pred CeEEEEEEEEEcCCHHHHHHHHhCCCChhHcchhcCEEEEEcCCCCCCCeEEEEEecCCCccceEEEEEEEEeccCCEEE
Confidence 3444444 8999999999999999998888887766
Q ss_pred ----------------------cCCceEEEEEEEEecCCCCCHHHHHHHHhhchHHHHHHHHHHHHH
Q 006041 129 ----------------------RSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAER 173 (663)
Q Consensus 129 ----------------------~~~gT~LtY~v~V~P~f~vP~~lie~~lr~dLp~nL~Ai~~~Ae~ 173 (663)
.++||.+.++..+.|.-....-.....+..=...+|.+|++.+|+
T Consensus 156 YsIieG~~p~~~Y~stikV~p~~dGGT~V~Ws~~f~pp~g~~~e~a~~~v~~~y~~gL~~Lk~~~E~ 222 (223)
T 3qrz_A 156 FSVVGGDHRLKNYRSVTTLHASDDEGTVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQSLARSTNR 222 (223)
T ss_dssp CCCTTCSSSCCCCCCEEEC--------CCEEEEEECSCSSSCSTTHHHHHHHHHHHHHHHHHHTCC-
T ss_pred EEEEeCCCccccEEEEEEEEEcCCCCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 135788888888886444433344555666668888888887775
No 108
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=92.87 E-value=0.23 Score=49.40 Aligned_cols=92 Identities=11% Similarity=0.038 Sum_probs=74.4
Q ss_pred CCceEEEEEEccCCc--ceEEEEEEEccCHHHHH-HHhhCchhhhhcccccee---------------------------
Q 006041 79 QRKVHCEVEVVSWRE--RRIKAEMLVNADVDSVW-NALTDYERLADFVPNLAC--------------------------- 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~~~--rrV~a~i~i~ap~e~VW-~vLTDYe~la~fiP~l~~--------------------------- 128 (663)
.++|.|-..+.+.+. .-+.+...|+++++.++ .+|.|. .+..|++.+
T Consensus 58 ~~gi~V~~k~~~~~~~~~~~K~~~~v~~~~~~v~~~ll~dr---~~Wd~~~~~~~vle~id~~~~I~y~~~~~p~p~~~R 134 (237)
T 2pso_A 58 TDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRER---HLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSR 134 (237)
T ss_dssp SSSCEEEEECCCSSCCCCEEEEEEEESSCHHHHHHHHHHCG---GGTCTTBCCCEEEEEEETTEEEEEEEECCSSSCCCE
T ss_pred CCCeEEEEEEcCCCCCcEEEEEEEEEcCChHHHHHHHHhhh---hhHHhhhceEEEEEEcCCCcEEEEEEecCCCCcCCe
Confidence 567888888774443 55899999999998876 588884 455555554
Q ss_pred -------------------------------------------------cCCceEEEEEEEEecCCCCCHHHHHHHHhhc
Q 006041 129 -------------------------------------------------RSSTTTLSYEVNVIPRLNFPAIFLERIIRSD 159 (663)
Q Consensus 129 -------------------------------------------------~~~gT~LtY~v~V~P~f~vP~~lie~~lr~d 159 (663)
.+++|.++|.+.+.|+.++|..+ ...+.+.
T Consensus 135 Dfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~~~~Dp~G~iP~~l-n~~~~~~ 213 (237)
T 2pso_A 135 DFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWY-SKGFGHL 213 (237)
T ss_dssp EEEEEEEEESCCGGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCSSSCTTTT-TTHHHHH
T ss_pred EEEEEEEEEEECCCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEEEEeCCCCCchHHH-HHHHHHH
Confidence 24779999999999999999999 9999999
Q ss_pred hHHHHHHHHHHHHHh
Q 006041 160 LPVNLQALACRAERS 174 (663)
Q Consensus 160 Lp~nL~Ai~~~Ae~~ 174 (663)
++..|..||+.++..
T Consensus 214 ~~~~l~~LR~~~~~~ 228 (237)
T 2pso_A 214 CAAEVARIRNSFQPL 228 (237)
T ss_dssp HHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988654
No 109
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=92.81 E-value=0.75 Score=42.95 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=29.5
Q ss_pred cceEEEEEEEccCHHHHHHHhh-Cchh-hhhccccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALT-DYER-LADFVPNL 126 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLT-DYe~-la~fiP~l 126 (663)
...+..++.|++|++.||+++. |+++ +++++|..
T Consensus 2 ~~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~ 37 (159)
T 1e09_A 2 VFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQA 37 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTT
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchhhChhh
Confidence 3468899999999999999998 9996 59999954
No 110
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=92.74 E-value=0.18 Score=48.20 Aligned_cols=42 Identities=19% Similarity=0.403 Sum_probs=35.4
Q ss_pred EEEccCCcceEEEEEEEccCHHHHHHHhhCchhhhhcccccee
Q 006041 86 VEVVSWRERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC 128 (663)
Q Consensus 86 ~e~l~~~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~ 128 (663)
+.+...+ ..|..++.|+||++.||++|||-+++++.+|....
T Consensus 29 ~~~~~~~-~~i~~~~~i~Ap~e~VW~altdp~~l~~W~~~~~~ 70 (184)
T 2nn5_A 29 FRLENQT-IYFGTERAISASPQTIWRYLTETDKLKQWFPELEI 70 (184)
T ss_dssp EEEETTE-EEEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEE
T ss_pred hhcCCCC-cEEEEEEEeCCCHHHHHHHHcCHHHHHHhCCCccc
Confidence 3444444 67999999999999999999999999999997765
No 111
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=92.65 E-value=0.078 Score=48.03 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=30.8
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhccccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVPNL 126 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l 126 (663)
...|..++.|+||++.||++|||.+++++.+|..
T Consensus 4 ~~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~ 37 (146)
T 1xn5_A 4 LPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMEN 37 (146)
T ss_dssp CCCEEEEEEESSCHHHHHHHTTSHHHHHTTSCCB
T ss_pred CcEEEEEEEEcCCHHHHHHHHhChhHHHHhcCCC
Confidence 4569999999999999999999999999988764
No 112
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=92.05 E-value=0.093 Score=47.93 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=30.7
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
....|..++.|+||++.||++|||.+++++.++.
T Consensus 8 ~~~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~ 41 (152)
T 2kew_A 8 ALPDITKSITLEAPIQKVWETVSTSEGIAKWFMP 41 (152)
T ss_dssp SSCCEEEEEEECSCHHHHHHHSSSSHHHHHHHCS
T ss_pred cccEEEEEEEECCCHHHHHHHHhCHHHHHHhcCC
Confidence 3457999999999999999999999999998776
No 113
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=91.96 E-value=0.39 Score=47.87 Aligned_cols=33 Identities=9% Similarity=0.260 Sum_probs=28.9
Q ss_pred EEEEEEEccCHHHHHHHhhCchhhhhcccccee
Q 006041 96 IKAEMLVNADVDSVWNALTDYERLADFVPNLAC 128 (663)
Q Consensus 96 V~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~ 128 (663)
......|+||+++||+++.|++++..+.|.+.+
T Consensus 52 ~~v~~~I~ApadkVW~lv~dF~~l~~w~p~V~s 84 (211)
T 3k3k_A 52 SLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKS 84 (211)
T ss_dssp EEEEEEESSCHHHHHHHHTCTTCGGGTCSSEEE
T ss_pred EEEEEEEcCCHHHHHHHHhCcCChhHcCccceE
Confidence 344458999999999999999999999998876
No 114
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=91.84 E-value=0.58 Score=43.54 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=29.9
Q ss_pred ceEEEEEEEccCHHHHHHHhh-Cchhh-hhcccccee
Q 006041 94 RRIKAEMLVNADVDSVWNALT-DYERL-ADFVPNLAC 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLT-DYe~l-a~fiP~l~~ 128 (663)
..+...+.|++|++.||+++. |++++ ++++|.+.+
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s 39 (155)
T 1icx_A 3 FAFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQS 39 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCcchhcchhhhhccE
Confidence 457889999999999999999 99965 888877666
No 115
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=91.81 E-value=0.11 Score=47.59 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=30.1
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
..+.|..++.|+||++.||++|||-++++++.|.
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~ 40 (151)
T 3q63_A 7 ENRTVVVERQISHPPEKLWRALTQPHLIEEWLMK 40 (151)
T ss_dssp --CEEEEEEEESSCHHHHHHHHHCHHHHHHHSCE
T ss_pred CCCeEEEEEEeCCCHHHHHHHHcCHHHHHhhcCc
Confidence 4567999999999999999999999999999884
No 116
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=91.43 E-value=0.12 Score=46.94 Aligned_cols=31 Identities=19% Similarity=0.456 Sum_probs=28.6
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhc-cc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADF-VP 124 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~f-iP 124 (663)
+.|..++.|+||++.||++|||-++++++ ++
T Consensus 2 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~ 33 (144)
T 2l8o_A 2 NKITVEVTVYAAIEKVWKYWNEPAHIMKWCQA 33 (144)
T ss_dssp CSEEEEEEECSCHHHHHHHHHCHHHHHHHSTT
T ss_pred cEEEEEEEECCCHHHHHHHHCCHHHHhhccCC
Confidence 45889999999999999999999999999 65
No 117
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=91.06 E-value=0.2 Score=46.58 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=32.2
Q ss_pred cCCcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 90 SWRERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 90 ~~~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
..+.+.|..++.|+||++.||++|||-++++++.+
T Consensus 9 ~~~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~ 43 (164)
T 3pu2_A 9 PGSATRLEFRRHFAATPEQLWAALTSPALLPAWLF 43 (164)
T ss_dssp CCBTTEEEEEEEESSCHHHHHHHHHCTTTGGGTSC
T ss_pred CCCCceEEEEEEECCCHHHHHHHhcCHHHHhhEeC
Confidence 45667899999999999999999999999999987
No 118
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=90.73 E-value=0.64 Score=47.30 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=68.9
Q ss_pred CCceEEEEEEccCCcceEEEEEEEccCHHHHHHHhhCchhhhhcccccee------------------------------
Q 006041 79 QRKVHCEVEVVSWRERRIKAEMLVNADVDSVWNALTDYERLADFVPNLAC------------------------------ 128 (663)
Q Consensus 79 ~~~V~v~~e~l~~~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~------------------------------ 128 (663)
.++|.|-.... .+.-.+.+...|++|++.||++|.|-+...+..+++.+
T Consensus 74 ~~gv~Vy~~~~-~~~l~~k~~~~v~~~~~~v~~~L~D~~~R~~WD~~~~~~~vle~id~~~ivY~~~~p~~~~~v~~RDF 152 (258)
T 3fo5_A 74 ISQVRLYTLED-DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDF 152 (258)
T ss_dssp ETTEEEEEEEC-SSCEEEEEEEEESSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEETTEEEEEEEECCCTTCSSCEEE
T ss_pred CCCeEEEEEEC-CCceEEEEEEEEeCCHHHHHHHHhCchhHhHhhhhccEEEEEEEcCCCeEEEEEecCCccCCCCCCEE
Confidence 34666655433 33456889999999999999999999999999888877
Q ss_pred -------------------------------------------------cCCceEEEEEEEEecCCCCCHHHHHHHH-hh
Q 006041 129 -------------------------------------------------RSSTTTLSYEVNVIPRLNFPAIFLERII-RS 158 (663)
Q Consensus 129 -------------------------------------------------~~~gT~LtY~v~V~P~f~vP~~lie~~l-r~ 158 (663)
.+++|.|+|-.++.|+. +|.++.+.+- .+
T Consensus 153 V~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~VtY~~q~dpG~-lP~~~~n~~g~s~ 231 (258)
T 3fo5_A 153 VILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYYNQATPGV-LNYVTTNVAGLSS 231 (258)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEEEEEESCCGGG-HHHHHHHHHTSCC
T ss_pred EEEEEEEeccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEEEEEEeeCCCC-CCceEEeccccch
Confidence 24779999999999976 9999888643 33
Q ss_pred chHHHHHHHHHHHHH
Q 006041 159 DLPVNLQALACRAER 173 (663)
Q Consensus 159 dLp~nL~Ai~~~Ae~ 173 (663)
.+=..+.++++..+.
T Consensus 232 ~~~~t~~~~~~fl~~ 246 (258)
T 3fo5_A 232 EFYTTFKACEQFLLD 246 (258)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 333445555555554
No 119
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=90.50 E-value=0.16 Score=44.84 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=28.9
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
+.|..++.|+||++.||++|||-+++++.++.
T Consensus 3 ~~~~~~~~i~ap~e~Vw~altd~~~~~~W~~~ 34 (147)
T 1z94_A 3 NTIRLHRVLSAPPERVYRAFLDPLALAKWLPP 34 (147)
T ss_dssp CCEEEEEEESSCHHHHHHHTTCHHHHHHHSSC
T ss_pred cEEEEEEEeCCCHHHHHHHhCCHHHHhhccCC
Confidence 45788899999999999999999999998864
No 120
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=90.46 E-value=12 Score=35.56 Aligned_cols=125 Identities=10% Similarity=0.128 Sum_probs=75.8
Q ss_pred CHHHHHHHHh-ccCcccccCcCCcEEEEEeecCCEEEEEEEeccceeEEEEEEEEEEEEeeeCCCeEEEEEEe-cCCcee
Q 006041 286 PVSEVWNVMT-AYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFEQVE-GDFDSF 363 (663)
Q Consensus 286 PpeqVWaVLT-DyEnyPeWiP~V~sSrVLer~gn~vrv~q~g~~gll~~~~~~rvVLDV~E~pprrIsfr~Ve-GdFr~f 363 (663)
+.+|||+=|. -.++=-.|+|.+.+|+|+++.++.+ .+...+.+. ..+.+ ++..++.++.|.+.. |....-
T Consensus 21 Tr~QlW~GL~~kar~p~~Fvp~i~~c~Vlse~~~~~-~R~l~fg~~---~i~e~----vtl~~~~~v~f~~~~t~~~~gs 92 (157)
T 2ffs_A 21 DRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRL-HRRLYLPGL---VVEDE----VVLKAPDSAHYSIKPSAEVAGG 92 (157)
T ss_dssp CHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSSEE-EEEEEETTE---EEEEE----EEEETTTEEEEEECCCSSSBEE
T ss_pred CHHHHHHHHHHHhcChhhcccccCeEEEEecCCCeE-EEEEEECCC---ccceE----EEEcCCcEEEEEcccccCCCCc
Confidence 4589998665 4556667999999999999876643 222223332 23344 334588999999866 222222
Q ss_pred EEEEEEEEcCCCeEEEEEEEEEEeccC----ccchHHHHHHHHHhhHHHHHHHHHHHHHh
Q 006041 364 QGKWLFEQLGSHHTLLKYSVESKMQKN----SLLSEAIMEEVIYEDLPSNLCAIRDYVEK 419 (663)
Q Consensus 364 ~G~WtLeplgdGgTrVtYtve~eP~~g----g~LP~~L~er~vre~L~~~L~ALR~RAEk 419 (663)
.-.=+++...+|.=-|+|..+...... -.+ .....++.+.....+++.||+.+..
T Consensus 93 ~ltn~Iee~~~g~L~lrF~ye~~~p~~s~e~~~~-~~~~~~ay~~ad~~Tv~~iRel~~~ 151 (157)
T 2ffs_A 93 SLDMTIEEPEPGSLFVRFAYCTRYLQPLGDELPY-DAFVKQAYIAMDVETIATIRDRFGA 151 (157)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECSCC--CCCCC-BHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEeeCCCCcEEEEEEEEccCCCCChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 223355554455455566555443210 011 1356777888888999999998754
No 121
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=89.99 E-value=0.21 Score=45.18 Aligned_cols=30 Identities=23% Similarity=0.530 Sum_probs=27.5
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhc-cc
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADF-VP 124 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~f-iP 124 (663)
.|..++.|+||++.||++|||-++++++ ++
T Consensus 2 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~ 32 (144)
T 2lgh_A 2 KISIEAHIEQEIEAVWWAWNDPDCIARWNAA 32 (144)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTSSSC
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhccCCC
Confidence 4788999999999999999999999998 65
No 122
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=89.96 E-value=0.2 Score=44.92 Aligned_cols=30 Identities=33% Similarity=0.500 Sum_probs=27.4
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhc-cc
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADF-VP 124 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~f-iP 124 (663)
.|..++.|+||++.||++|||-+++++. ++
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~ 32 (142)
T 2lcg_A 2 NITVETTVAAPVGKVWRAYTTPEDIKQWNAA 32 (142)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCCS
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHhcCCCC
Confidence 4778999999999999999999999998 65
No 123
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=89.83 E-value=0.23 Score=46.45 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=30.4
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
..+.|..++.|+||++.||++|||-++++++++
T Consensus 14 ~~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~ 46 (175)
T 2lf2_A 14 ENKTITIKREFAAVRAIVWEAFTRAEILDQWWA 46 (175)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHTCHHHHHHSSS
T ss_pred CCceEEEEEEEcCCHHHHHHHhCCHHHHhhCcC
Confidence 467899999999999999999999999999975
No 124
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=89.55 E-value=0.25 Score=46.02 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.0
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
..+.|..++.|+||++.||++|||-+++++.++.
T Consensus 8 ~~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~p 41 (178)
T 1xfs_A 8 AELDLMLKRELAVPVNLVWRGLTEPELLKKWFVP 41 (178)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHHCHHHHTTTSSC
T ss_pred CCceEEEEEEecCCHHHHHHHhCCHHHHhhCCCC
Confidence 3466889999999999999999999999999753
No 125
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=89.20 E-value=0.54 Score=43.97 Aligned_cols=34 Identities=9% Similarity=0.426 Sum_probs=30.9
Q ss_pred eEEEEEEEccCHHHHHHH-hhCchhh-hhcccccee
Q 006041 95 RIKAEMLVNADVDSVWNA-LTDYERL-ADFVPNLAC 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~v-LTDYe~l-a~fiP~l~~ 128 (663)
.+..++.|++|++.||++ +.|+++| ++++|.+.+
T Consensus 4 ~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~ 39 (155)
T 2flh_A 4 EFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVK 39 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEE
T ss_pred EEEEEEEecCCHHHHHHHHhcccccccchhccccce
Confidence 578899999999999999 7999999 999997754
No 126
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=88.89 E-value=0.3 Score=45.11 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=29.8
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
..+.|..++.|+||++.||++|||-++++++.+
T Consensus 10 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~ 42 (172)
T 2ldk_A 10 EALSFSIVAEFDADVKRVWAIWEDPRQLERWWG 42 (172)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHHCHHHHHTTSS
T ss_pred CCceEEEEEEeCCCHHHHHHHhCCHHHHHhccC
Confidence 457799999999999999999999999998864
No 127
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=88.29 E-value=0.34 Score=43.59 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=30.2
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhccccce
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPNLA 127 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~ 127 (663)
+.|..++.|+||++.||++|||=++++++.+...
T Consensus 11 ~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~~~~ 44 (145)
T 1x53_A 11 CKITLKETFLTSPEELYRVFTTQELVQAFTHAPA 44 (145)
T ss_dssp EEEEEEEEESSCHHHHHHHTTCHHHHHHHSCSCC
T ss_pred cEEEEEEEECCCHHHHHHHhCCHHHHHHhcCCCc
Confidence 5689999999999999999999999999975443
No 128
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=88.18 E-value=0.25 Score=45.56 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.5
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
.+.|..++.|+||++.||++|||-++++++++
T Consensus 7 ~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~ 38 (164)
T 2l9p_A 7 KNKIIFTRTFSAPINKVFDAYTKRELFEQWFH 38 (164)
T ss_dssp SSEEEECCEESSCHHHHHHHHHCHHHHTTTCC
T ss_pred CceEEEEEEeCCCHHHHHHHhCCHHHHHhccC
Confidence 46799999999999999999999999999975
No 129
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=87.70 E-value=1 Score=42.01 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=31.1
Q ss_pred cceEEEEEEEccCHHHHHHHhh-Cchhh-hhcccccee
Q 006041 93 ERRIKAEMLVNADVDSVWNALT-DYERL-ADFVPNLAC 128 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLT-DYe~l-a~fiP~l~~ 128 (663)
...+...+.|++|++.||+++. |++++ ++++|.+++
T Consensus 2 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s 39 (157)
T 1tw0_A 2 VFVFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQS 39 (157)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEE
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccE
Confidence 3467889999999999999998 99965 888888777
No 130
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=87.15 E-value=0.39 Score=44.79 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=29.9
Q ss_pred cCCcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 90 SWRERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 90 ~~~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
....+.|..+..|+||++.||++|||=++++++.+
T Consensus 15 ~~~~~~i~~~r~~~ap~e~Vw~A~Tdpe~l~~W~~ 49 (158)
T 3ni8_A 15 YFQGMSFEITEEYYVPPEVLFNAFTDAYTLTRLSR 49 (158)
T ss_dssp ---CCCEEEEEEESSCHHHHHHHHHCHHHHHHHTT
T ss_pred CCCCceEEEEEEECCCHHHHHHHhcCHHHHHhhcC
Confidence 34456788999999999999999999999999997
No 131
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=86.95 E-value=0.38 Score=46.00 Aligned_cols=32 Identities=25% Similarity=0.523 Sum_probs=29.9
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
+.|..++.|+||++.||++|||-+++++.++.
T Consensus 19 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~ 50 (191)
T 2k5g_A 19 QSIRFERLLPGPIERVWAWLADADKRARWLAG 50 (191)
T ss_dssp SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCC
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHHhhcCCC
Confidence 56899999999999999999999999999876
No 132
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=86.36 E-value=0.49 Score=43.61 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=29.5
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
.+.|..+..|+||++.||++|||-+++++..+.
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~ 40 (162)
T 3q64_A 8 HSTFIIERLYPAPPSKVFFALGNADAKRRWFTD 40 (162)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHSSC
T ss_pred cceEEEEEEeCCCHHHHHHHHCCHHHHhhcCCC
Confidence 356888999999999999999999999999854
No 133
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=86.35 E-value=0.43 Score=43.27 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=27.5
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
.|..++.|+||++.||++|||-+++++..+
T Consensus 3 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~ 32 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAWVSDGAKLLQWWG 32 (152)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCS
T ss_pred eEEEEEEECCCHHHHHHHHcCHHHHhhccC
Confidence 477889999999999999999999999876
No 134
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=86.24 E-value=0.49 Score=43.60 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=29.0
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcccc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPN 125 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~ 125 (663)
+.|.....|+||++.||++|||-++++++.+.
T Consensus 8 ~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~ 39 (161)
T 3rd6_A 8 STFTIERTYPQSPDRVFHAFADKATVRRWRVD 39 (161)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHHHHHHHTCC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHHHhhccCC
Confidence 56888889999999999999999999999853
No 135
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=86.01 E-value=1.1 Score=41.77 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=31.0
Q ss_pred ceEEEEEEEccCHHHHHHHhh-Cchhh-hhcccccee
Q 006041 94 RRIKAEMLVNADVDSVWNALT-DYERL-ADFVPNLAC 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLT-DYe~l-a~fiP~l~~ 128 (663)
..+...+.|++|++.||+++. |++++ ++++|.+++
T Consensus 4 ~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s 40 (158)
T 2qim_A 4 FTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQS 40 (158)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcE
Confidence 468889999999999999999 99975 888888777
No 136
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=83.64 E-value=2.2 Score=41.47 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=28.6
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhccccc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFVPNL 126 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l 126 (663)
+.|...=.+++|++.||+.|||=++|++.++..
T Consensus 32 ~~l~i~R~f~Ap~e~VW~AlTdpe~l~~W~~~~ 64 (192)
T 2luz_A 32 RSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP 64 (192)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHHHHTTTSCCE
T ss_pred eEEEEEEEeCCCHHHHHHHHcCHHHHheeeCCC
Confidence 447777788999999999999999999988654
No 137
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=82.65 E-value=0.77 Score=42.69 Aligned_cols=32 Identities=19% Similarity=0.190 Sum_probs=29.1
Q ss_pred cceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 93 ERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
.+.|..+..|+||++.||++|||=++++++.+
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~ 39 (166)
T 3put_A 8 HTTFVIERRLTAPVARVFRAWSTPESKRQWFA 39 (166)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHHT
T ss_pred cceEEEEEEECCCHHHHHHHhCCHHHHHhcCC
Confidence 35688999999999999999999999999984
No 138
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=82.10 E-value=0.92 Score=42.39 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=30.0
Q ss_pred CCcceEEEEEEEccCHHHHHHHhhCchhhhhccc
Q 006041 91 WRERRIKAEMLVNADVDSVWNALTDYERLADFVP 124 (663)
Q Consensus 91 ~~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP 124 (663)
.+.+.|..+..|+||++.||+++||=+++++..+
T Consensus 10 ~~~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~ 43 (168)
T 3uid_A 10 LDTLTLTITAEFAAPVTRIWQIYADPRQLEKVWG 43 (168)
T ss_dssp TTTTEEEEEEEESSCHHHHHHHHHSHHHHHHHHC
T ss_pred CCCCEEEEEEEEcCCHHHHHHHhCCHHHHhhEeC
Confidence 3456799999999999999999999999999754
No 139
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=81.55 E-value=1 Score=42.15 Aligned_cols=35 Identities=6% Similarity=0.151 Sum_probs=30.6
Q ss_pred ceEEEEEEEccCHHHHHHH-hhCchhh-hhcccccee
Q 006041 94 RRIKAEMLVNADVDSVWNA-LTDYERL-ADFVPNLAC 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~v-LTDYe~l-a~fiP~l~~ 128 (663)
-.+...+.|++|++.||++ +.|+++| ++.+|...+
T Consensus 4 ~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~ 40 (154)
T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYK 40 (154)
T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCS
T ss_pred eEEEEEEEecCCHHHHHHhhhCCccccchhhccCcee
Confidence 4578899999999999999 9999999 899997543
No 140
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=81.42 E-value=1.4 Score=42.26 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=31.0
Q ss_pred CcceEEEEEEEccCHHHHHHHhhCchhhhhccccc
Q 006041 92 RERRIKAEMLVNADVDSVWNALTDYERLADFVPNL 126 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l 126 (663)
..+.|..++.|++|++.||++|||=++++++++..
T Consensus 19 ~~~~i~~~r~i~Appe~Vw~alTdpe~l~~W~~p~ 53 (181)
T 4fpw_A 19 EARSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP 53 (181)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHHCHHHHHHHSCCE
T ss_pred CCceEEEEEEECCCHHHHHHHHcChHHHhhccCCC
Confidence 34679999999999999999999999999997653
No 141
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=81.27 E-value=2.1 Score=40.77 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=30.6
Q ss_pred cceEEEEEEEccCHHHHHHHh-hCchh-hhhcccccee
Q 006041 93 ERRIKAEMLVNADVDSVWNAL-TDYER-LADFVPNLAC 128 (663)
Q Consensus 93 ~rrV~a~i~i~ap~e~VW~vL-TDYe~-la~fiP~l~~ 128 (663)
.-.+...+.|++|++.||+++ .|+++ +++.+|....
T Consensus 8 ~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~ 45 (168)
T 3rws_A 8 VITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIE 45 (168)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEE
T ss_pred eEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccc
Confidence 345788999999999999997 99999 5899997443
No 142
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=80.72 E-value=2.3 Score=40.42 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=31.6
Q ss_pred CcceEEEEEEEccCHHHHHHHh-hCchhh-hhcccccee
Q 006041 92 RERRIKAEMLVNADVDSVWNAL-TDYERL-ADFVPNLAC 128 (663)
Q Consensus 92 ~~rrV~a~i~i~ap~e~VW~vL-TDYe~l-a~fiP~l~~ 128 (663)
+.-.+...+.|++|++.||+++ .|+++| ++.+|....
T Consensus 8 g~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~ 46 (165)
T 3ie5_A 8 AAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFK 46 (165)
T ss_dssp SCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEE
T ss_pred eeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccc
Confidence 3456889999999999999995 899999 899997544
No 143
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=79.17 E-value=3.1 Score=36.56 Aligned_cols=48 Identities=15% Similarity=0.256 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCcccHH---HHHHHhcCHHHHH
Q 006041 480 QTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDVE---KAITRMGGFRRMA 531 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~dl~---~aI~~~GG~~~vA 531 (663)
-++-+.--..|.+|+...|..--.|. +.....||+ .+|.++|||.+|-
T Consensus 13 ~~~~~~F~~~L~~F~~~~g~~l~~P~----i~gk~vdL~~Ly~~V~~~GG~~~V~ 63 (107)
T 2lm1_A 13 TRVKLNFLDQIAKFWELQGSSLKIPM----VERKALDLYTLHRIVQEEGGMEQTT 63 (107)
T ss_dssp SHHHHHHHHHHHHHHTTTCCCCSCCC----TTTSSCCHHHHHHHHHHHTCHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCCCCCCe----ECCEeecHHHHHHHHHHhcCHHHhc
Confidence 35667778899999999987533443 345566655 5999999988773
No 144
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=76.55 E-value=2.9 Score=39.31 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=29.1
Q ss_pred eEEEEEEEccCHHHHHHHh-hCchhh-hhcccccee
Q 006041 95 RIKAEMLVNADVDSVWNAL-TDYERL-ADFVPNLAC 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vL-TDYe~l-a~fiP~l~~ 128 (663)
.....+.|++|++.||+++ .|+++| ++.+|...+
T Consensus 4 ~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~ 39 (159)
T 4a8u_A 4 NYETEATSVIPAARLFKAFILDGDNLFPKVAPQAIS 39 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCC
T ss_pred EEEEEEEecCCHHHHHHHHhcCccccchhhCchhcc
Confidence 4677899999999999999 999995 799997544
No 145
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=75.10 E-value=2.2 Score=41.86 Aligned_cols=33 Identities=12% Similarity=0.277 Sum_probs=29.7
Q ss_pred EEEEEEEccCHHHHHHHhhCchhhhhcccccee
Q 006041 96 IKAEMLVNADVDSVWNALTDYERLADFVPNLAC 128 (663)
Q Consensus 96 V~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~ 128 (663)
=.....|+||+++||+++-|++.+..+.|.+.+
T Consensus 32 s~~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s 64 (189)
T 3oji_A 32 SLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKS 64 (189)
T ss_dssp EEEEEEESSCHHHHHHHHSCTTCGGGTCTTEEE
T ss_pred eeEEEEEcCCHHHHHHHHhCCCChhhCccccce
Confidence 345678999999999999999999999999998
No 146
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=74.84 E-value=1.3 Score=41.79 Aligned_cols=34 Identities=12% Similarity=0.312 Sum_probs=29.7
Q ss_pred eEEEEEEEccCHHHHHHHh-hCchhhhhccc-ccee
Q 006041 95 RIKAEMLVNADVDSVWNAL-TDYERLADFVP-NLAC 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vL-TDYe~la~fiP-~l~~ 128 (663)
.+..++.|+||+++||+++ .|...+++++| .+++
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s 53 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQG 53 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSS
T ss_pred EEEEEEEecCCHHHHHHHHhcccccccccccccceE
Confidence 5899999999999999995 58899999999 5555
No 147
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=73.22 E-value=1.8 Score=39.78 Aligned_cols=28 Identities=11% Similarity=0.313 Sum_probs=24.3
Q ss_pred ceEEEEEEEccCHHHHHHHhhCchhhhhcc
Q 006041 94 RRIKAEMLVNADVDSVWNALTDYERLADFV 123 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vLTDYe~la~fi 123 (663)
+.|..++.|+||++.||+++|| .+++.+
T Consensus 4 ~~i~~~r~~~Ap~e~Vw~A~Td--~l~~W~ 31 (155)
T 1zxf_A 4 PFVRHSVTVKADRKTAFKTFLE--GFPEWW 31 (155)
T ss_dssp SCEEEEEEESSHHHHHHHHHTT--CSSSSS
T ss_pred ceEEEEEEEeCCHHHHHHHHHh--hHHhhc
Confidence 4688999999999999999999 577765
No 148
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=66.25 E-value=4.1 Score=40.08 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=29.6
Q ss_pred eEEEEEEEccCHHHHHHHh-h-Cchhh-hhcccccee
Q 006041 95 RIKAEMLVNADVDSVWNAL-T-DYERL-ADFVPNLAC 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vL-T-DYe~l-a~fiP~l~~ 128 (663)
.++.++.|++|++.||+++ . |+++| ++.+|.+.+
T Consensus 30 ~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~ 66 (201)
T 2vq5_A 30 VIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFE 66 (201)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCS
T ss_pred EEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccce
Confidence 4788899999999999995 6 99999 799998744
No 149
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=64.67 E-value=5.9 Score=34.06 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCccc---HHHHHHHhcCHHHHHH
Q 006041 480 QTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVD---VEKAITRMGGFRRMAS 532 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~d---l~~aI~~~GG~~~vA~ 532 (663)
-+.-+.--..|.+|+...|..--.|. +.....| |+.+|.++|||.+|-+
T Consensus 5 ~r~~~~F~~~L~~F~~~~g~~l~~P~----i~gk~lDL~~Ly~~V~~~GG~~~V~~ 56 (96)
T 2jxj_A 5 SRVRLDFLDQLAKFWELQGSTLKIPV----VERKILDLYALSKIVASKGGFEMVTK 56 (96)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCCCCCE----ETTEECCCHHHHHHHHHHHTTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCc----CCCEeccHHHHHHHHHHcCCHHHHcc
Confidence 45567778899999999997533443 3444455 5569999999877533
No 150
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=58.36 E-value=9.5 Score=34.20 Aligned_cols=49 Identities=14% Similarity=0.235 Sum_probs=34.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCcccH---HHHHHHhcCHHHHHH
Q 006041 480 QTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDV---EKAITRMGGFRRMAS 532 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~dl---~~aI~~~GG~~~vA~ 532 (663)
.++-..--..|.+|+...|..--.|. +.....|| +.+|.++|||.+|-+
T Consensus 9 ~r~~~~Fl~~L~~F~~~rG~~l~~P~----i~gk~lDL~~Ly~~V~~~GG~~~V~~ 60 (117)
T 2jrz_A 9 TRVKLNYLDQIAKFWEIQGSSLKIPN----VERRILDLYSLSKIVVEEGGYEAICK 60 (117)
T ss_dssp TTTHHHHHHHHHHHHHTTTSCCCCCE----ETTEECCHHHHHHHHHHHTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCe----ECCEeecHHHHHHHHHHccCHHHhcc
Confidence 34556777899999999997533342 34455555 569999999887743
No 151
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=58.05 E-value=5.6 Score=36.71 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=29.1
Q ss_pred ceEEEEEEEccCH-HHHHHHhhCchhhhhcccc
Q 006041 94 RRIKAEMLVNADV-DSVWNALTDYERLADFVPN 125 (663)
Q Consensus 94 rrV~a~i~i~ap~-e~VW~vLTDYe~la~fiP~ 125 (663)
.+|.-.+.|+||+ +.||++||+=+.|++.+..
T Consensus 4 ~~i~~e~~i~A~~~~~VW~~IStPegL~~Wfad 36 (136)
T 2lio_A 4 EKIHLEYLLNATSKNILWSAISTPTGLEDWFAD 36 (136)
T ss_dssp EEEEEEEEECTTSCTHHHHGGGSHHHHTTTSSS
T ss_pred CcEEEEEEecCChHHHHHHHhCChhhhhcccCC
Confidence 4688899999999 9999999999999998765
No 152
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=57.61 E-value=15 Score=33.26 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=36.6
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCcccHH---HHHHHhcCHHHHHH
Q 006041 480 QTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDVE---KAITRMGGFRRMAS 532 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~dl~---~aI~~~GG~~~vA~ 532 (663)
.++-+.--..|.+|+...|..-..| .+.....||+ .+|.++|||.+|-+
T Consensus 11 ~~~~~~Fl~~L~~F~~~rG~~l~~P----~i~gk~lDLy~Ly~~V~~~GG~~~V~~ 62 (122)
T 2eqy_A 11 TRVKLNFLDQIAKYWELQGSTLKIP----HVERKILDLFQLNKLVAEEGGFAVVCK 62 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCC----BSSSSBCCHHHHHHHHHHHTCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCCCCCC----eECCEeccHHHHHHHHHHccCHHHHcC
Confidence 5677788899999999999763344 2345666665 69999999987743
No 153
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=56.13 E-value=9.8 Score=34.03 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 553 ENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 553 ~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
++--+.|..|+++.|.+....|... =....=|.|..+|.++||+..|.+
T Consensus 21 ~~F~~~L~~F~~~~G~pl~~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~~ 69 (116)
T 2li6_A 21 ELFMKSLIENCKKRNMPLQSIPEIG-NRKINLFYLYMLVQKFGGADQVTR 69 (116)
T ss_dssp HHHHHHHHHHHHTTTSCCSSCCCCB-SCCCSTTHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCceEC-CEeecHHHHHHHHHHhcCHHHccc
Confidence 3445678889998898765667642 122223789999999999998743
No 154
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=56.13 E-value=6.8 Score=35.67 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCccc---HHHHHHHhcCHHHH---------HHHcCch
Q 006041 480 QTNIEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVD---VEKAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~d---l~~aI~~~GG~~~v---------A~~lg~~ 537 (663)
-++-+.--..|.+|+.+.|..- ..|.. .....| |+.+|.++|||.+| |++||+.
T Consensus 16 ~~~~~~Fl~~L~~F~~~rG~pl~~~P~i----~gk~lDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~ 82 (123)
T 1kkx_A 16 NKQYELFMKSLIENCKKRNMPLQSIPEI----GNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQIS 82 (123)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSSSSCCCC----SSSSCCTTHHHHHHTTTSCHHHHTTSHHHHHHHHHHTCC
T ss_pred chhHHHHHHHHHHHHHHcCCCCCcCceE----CCEeecHHHHHHHHHHhcCHHhccccccHHHHHHHHCCC
Confidence 3456777889999999999642 34542 344444 56799999998876 7888877
No 155
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=53.21 E-value=15 Score=32.14 Aligned_cols=52 Identities=10% Similarity=0.258 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCcccHH---HHHHHhcCHHHH---------HHHcCch
Q 006041 482 NIEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVDVE---KAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 482 ~~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~dl~---~aI~~~GG~~~v---------A~~lg~~ 537 (663)
|-+.--..|.+|+...|..- ..|. +.....||+ .+|.++|||.+| |++||+.
T Consensus 3 e~~~Fl~~L~~F~~~rg~~~~~~P~----i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~ 67 (107)
T 1ig6_A 3 DEQAFLVALYKYMKERKTPIERIPY----LGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGN 67 (107)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCCC----SSSSSCCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHcCCCCCcCce----ECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhCCC
Confidence 34556678999999998642 2454 345556654 589999998766 6677765
No 156
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=52.31 E-value=14 Score=33.48 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 553 ENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 553 ~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
+.--+.|..|+++.|.+....|... =....=|.|.++|.++||+..|.+
T Consensus 23 ~~Fl~~L~~F~~~rG~~~~~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~~ 71 (125)
T 2cxy_A 23 KLWVDRYLTFMEERGSPVSSLPAVG-KKPLDLFRLYVCVKEIGGLAQVNK 71 (125)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCCEET-TEECCHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCeeEC-CEeecHHHHHHHHHHcCCHHHhcc
Confidence 3345678899999998766677641 122233899999999999998743
No 157
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=52.21 E-value=12 Score=34.00 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 553 ENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 553 ~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
++--+.|..|+++.|.+....|... =....=|.|..+|.++||+..|.+
T Consensus 24 ~~Fl~~L~~F~~~rG~~l~~~P~i~-gk~vDL~~Ly~~V~~~GG~~~V~~ 72 (128)
T 1c20_A 24 KEFLDDLFSFMQKRGTPINRLPIMA-KSVLDLYELYNLVIARGGLVDVIN 72 (128)
T ss_dssp HHHHHHHHHHHTTTSSCSSCCCEET-TEECCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccceeEC-CEeecHHHHHHHHHHhcCHHHcCc
Confidence 4556778899999998766677642 122333789999999999998743
No 158
>2esn_A Probable transcriptional regulator; PA0477, APC5828,transcription, PSI, protein struc initiative, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.37 c.94.1.1
Probab=50.31 E-value=3 Score=40.64 Aligned_cols=28 Identities=18% Similarity=0.073 Sum_probs=23.1
Q ss_pred hcCcccHHHHHHHhcCHHHHHHHcCchh
Q 006041 511 KHGRVDVEKAITRMGGFRRMASLMNLAL 538 (663)
Q Consensus 511 ~~gr~dl~~aI~~~GG~~~vA~~lg~~~ 538 (663)
.....-...+|.++|.|.++|++||.+.
T Consensus 11 ~l~~L~~f~~v~~~gs~s~AA~~L~isq 38 (310)
T 2esn_A 11 DLNLLLVFDALYRHRNVGTAASELAISA 38 (310)
T ss_dssp CTTHHHHHHHHHHHSSHHHHHHHHTCCH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHhCCCh
Confidence 3344556789999999999999999984
No 159
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=50.16 E-value=16 Score=31.95 Aligned_cols=47 Identities=19% Similarity=0.381 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 554 NLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 554 ~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
+--+.|..|+++.|.+. ..|... =....=|.|..+|.++||+..|.+
T Consensus 18 ~F~~~L~~F~~~~g~~l-~~P~i~-gk~vdL~~Ly~~V~~~GG~~~V~~ 64 (107)
T 2lm1_A 18 NFLDQIAKFWELQGSSL-KIPMVE-RKALDLYTLHRIVQEEGGMEQTTK 64 (107)
T ss_dssp HHHHHHHHHHTTTCCCC-SCCCTT-TSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC-CCCeEC-CEeecHHHHHHHHHHhcCHHHhcc
Confidence 44567888998889865 467541 122233899999999999998844
No 160
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=49.83 E-value=20 Score=33.57 Aligned_cols=35 Identities=6% Similarity=0.160 Sum_probs=29.9
Q ss_pred ceEEEEEEEccCHHHHHHHh-hCchhh-hhcccccee
Q 006041 94 RRIKAEMLVNADVDSVWNAL-TDYERL-ADFVPNLAC 128 (663)
Q Consensus 94 rrV~a~i~i~ap~e~VW~vL-TDYe~l-a~fiP~l~~ 128 (663)
-.+...+.+++|++.+|.++ .|.++| +..+|.+.+
T Consensus 4 ~~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~ik 40 (154)
T 2wql_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYK 40 (154)
T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCS
T ss_pred eEEEEEEEecCCHHHHHHHHhhcccccchhhccccee
Confidence 45778899999999999875 899997 789998766
No 161
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=49.10 E-value=11 Score=34.22 Aligned_cols=51 Identities=18% Similarity=0.374 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCcccH---HHHHHHhcCHHHH---------HHHcCch
Q 006041 483 IEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVDV---EKAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 483 ~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~dl---~~aI~~~GG~~~v---------A~~lg~~ 537 (663)
.+.--.+|.+|+...|..- ..|. +.....|| +.+|.++|||.+| |++||+.
T Consensus 22 ~~~Fl~~L~~F~~~rG~~~~~~P~----i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~ 85 (125)
T 2cxy_A 22 RKLWVDRYLTFMEERGSPVSSLPA----VGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG 85 (125)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCCE----ETTEECCHHHHHHHHHHHTSHHHHHHHTCHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCee----ECCEeecHHHHHHHHHHcCCHHHhcccCcHHHHHHHhCCC
Confidence 3456788999999998642 2454 34455555 5699999998877 5666665
No 162
>2ijl_A AGR_C_4647P, molybdenum-binding transcriptional repressor; structural GE DNA-binding protein, PSI-2, PROT structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=47.89 E-value=4.7 Score=37.22 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=28.8
Q ss_pred cccHHHHHHHhcCHHHHHHHcCchhhhcccCCCCccCChHHHHHHH
Q 006041 514 RVDVEKAITRMGGFRRMASLMNLALAYKHRKPKGYWDNLENLEEEI 559 (663)
Q Consensus 514 r~dl~~aI~~~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~~el 559 (663)
+..+..+|..+|.|.++|++||++. ..-|..+..||++|
T Consensus 28 ~L~~f~av~e~gS~s~AA~~L~iSq-------savS~~I~~LE~~l 66 (135)
T 2ijl_A 28 KVELMQLIAETGSISAAGRAMDMSY-------RRAWLLVDALNHMF 66 (135)
T ss_dssp HHHHHHHHHHHSCHHHHHHHTTCCH-------HHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHhCCHHHHHHHHCcCH-------HHHHHHHHHHHHHH
Confidence 4457889999999999999999993 34455455555443
No 163
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=46.72 E-value=15 Score=32.77 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=38.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCccc---HHHHHHHhcCHHHH---------HHHcCch
Q 006041 480 QTNIEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVD---VEKAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 480 ~~~~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~d---l~~aI~~~GG~~~v---------A~~lg~~ 537 (663)
-++-+.--..|.+|+...|..- ..|. +.....| |+.+|.++|||.+| |++||+.
T Consensus 17 ~~~~~~F~~~L~~F~~~~G~pl~~~P~----i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~ 83 (116)
T 2li6_A 17 NKQYELFMKSLIENCKKRNMPLQSIPE----IGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQIS 83 (116)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCCC----CBSCCCSTTHHHHHHHHHTSHHHHHHTTCHHHHHHHHTSC
T ss_pred chhHHHHHHHHHHHHHHcCCCCCCCce----ECCEeecHHHHHHHHHHhcCHHHccccCcHHHHHHHhCCC
Confidence 3677788899999999998652 2454 2344445 56799999998876 5566655
No 164
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=45.06 E-value=11 Score=32.93 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCcccHHHHHHHhcCHHHHHHHcCchhhhcccCCCCccCChHHHHHHHH
Q 006041 481 TNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDVEKAITRMGGFRRMASLMNLALAYKHRKPKGYWDNLENLEEEIS 560 (663)
Q Consensus 481 ~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~dl~~aI~~~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~~el~ 560 (663)
+|+-|+-..+++-..+.| ..+..+|++.|-...+.+|.++|.-.-+-..+.|..|-.. .-+|+--+..++||+
T Consensus 7 ~dLPNig~~~e~~L~~~G----I~t~~~Lr~~Ga~~ay~rLk~~~~~~~~~~L~aL~gAi~G---~~w~~l~~~~K~~L~ 79 (93)
T 3mab_A 7 SELPNIGKVLEQDLIKAG----IKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQG---IRWHGLDEAKKIELK 79 (93)
T ss_dssp GGSTTCCHHHHHHHHHTT----CCSHHHHHHHCHHHHHHHHHHHCTTCCHHHHHHHHHHHHT---SCGGGSCHHHHHHHH
T ss_pred hhCCCCCHHHHHHHHHcC----CCCHHHHHhCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcC---CcHHHCCHHHHHHHH
Confidence 455566666777777787 7799999999999999999999886656556666655322 334455577888999
Q ss_pred HHHHHh
Q 006041 561 RFQRSW 566 (663)
Q Consensus 561 ~f~~~~ 566 (663)
+|-++.
T Consensus 80 ~~~~~l 85 (93)
T 3mab_A 80 KFHQSL 85 (93)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987653
No 165
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=44.24 E-value=24 Score=31.98 Aligned_cols=53 Identities=17% Similarity=0.323 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCcccHH---HHHHHhcCHHHH---------HHHcCch
Q 006041 481 TNIEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVDVE---KAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 481 ~~~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~dl~---~aI~~~GG~~~v---------A~~lg~~ 537 (663)
++-+.--..|.+|+...|..- ..|. +.....||+ .+|.++|||.+| |++||+.
T Consensus 21 ~~~~~Fl~~L~~F~~~rG~~l~~~P~----i~gk~vDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~ 86 (128)
T 1c20_A 21 PKRKEFLDDLFSFMQKRGTPINRLPI----MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLP 86 (128)
T ss_dssp HHHHHHHHHHHHHHTTTSSCSSCCCE----ETTEECCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHHcCCCCcccee----ECCEeecHHHHHHHHHHhcCHHHcCccCcHHHHHHHhCCC
Confidence 455667789999999998642 3454 345556665 699999998765 6777766
No 166
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=44.11 E-value=16 Score=28.76 Aligned_cols=38 Identities=8% Similarity=0.094 Sum_probs=30.3
Q ss_pred CCCCHHHHHHhchHHHHHHHHHhcCH-HHHHHHhccccc
Q 006041 572 FMPSRKSFERAGRYDIARALEKWGGL-HEVSRLLSLKLR 609 (663)
Q Consensus 572 ~mPt~~~l~~agR~Dl~~Al~~~GG~-~~va~~lg~~~~ 609 (663)
..|-...+++..|.=|.+||+.+||- .++|+.||+.-+
T Consensus 9 ~~~l~~~l~~~E~~~i~~aL~~~~gn~~~aA~~LGisr~ 47 (63)
T 3e7l_A 9 IKELKEAKKEFEKIFIEEKLREYDYDLKRTAEEIGIDLS 47 (63)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHTCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHCcCHH
Confidence 34556677888899999999998874 589999999643
No 167
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=43.96 E-value=20 Score=32.12 Aligned_cols=47 Identities=17% Similarity=0.286 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHH
Q 006041 553 ENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVS 601 (663)
Q Consensus 553 ~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va 601 (663)
.+--+.|..|+++.|.+. ..|... =....=|.|..+|.++||+..|.
T Consensus 13 ~~Fl~~L~~F~~~rG~~l-~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~ 59 (117)
T 2jrz_A 13 LNYLDQIAKFWEIQGSSL-KIPNVE-RRILDLYSLSKIVVEEGGYEAIC 59 (117)
T ss_dssp HHHHHHHHHHHHTTTSCC-CCCEET-TEECCHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCC-CCCeEC-CEeecHHHHHHHHHHccCHHHhc
Confidence 344567889999999865 356431 12223388999999999999774
No 168
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=42.71 E-value=15 Score=33.30 Aligned_cols=56 Identities=14% Similarity=0.203 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHH---------HHHhcccc
Q 006041 552 LENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEV---------SRLLSLKL 608 (663)
Q Consensus 552 ~~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~v---------a~~lg~~~ 608 (663)
-++--+.|..|+++.|.+....|... =....=|.|..+|.+.||+..| |+.||+..
T Consensus 19 ~~~Fl~~L~~F~~~rG~pl~~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~ 83 (123)
T 1kkx_A 19 YELFMKSLIENCKKRNMPLQSIPEIG-NRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISD 83 (123)
T ss_dssp HHHHHHHHHHHHHHTTCSSSSCCCCS-SSSCCTTHHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHcCCCCCcCceEC-CEeecHHHHHHHHHHhcCHHhccccccHHHHHHHHCCCh
Confidence 45566789999999998766677653 2233337899999999999887 77888754
No 169
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=41.24 E-value=43 Score=29.10 Aligned_cols=33 Identities=3% Similarity=0.006 Sum_probs=26.3
Q ss_pred HHHHHHhchHHHHHHHHHhcC-HHHHHHHhcccc
Q 006041 576 RKSFERAGRYDIARALEKWGG-LHEVSRLLSLKL 608 (663)
Q Consensus 576 ~~~l~~agR~Dl~~Al~~~GG-~~~va~~lg~~~ 608 (663)
...+.+.-|.=|..||+++|| ...+|+.||+.-
T Consensus 52 ~~~l~~~Er~~I~~aL~~~~gn~~~AA~~LGIsR 85 (98)
T 1eto_A 52 ELVLAEVEQPLLDMVMQYTLGNQTRAALMMGINR 85 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHhCCCH
Confidence 345677788889999999765 568999999864
No 170
>1g2h_A Transcriptional regulatory protein TYRR homolog; protein structure, , DNA-binding domain, helix- turn-helix motif; NMR {Haemophilus influenzae} SCOP: a.4.1.12
Probab=40.96 E-value=13 Score=29.30 Aligned_cols=32 Identities=3% Similarity=-0.040 Sum_probs=26.3
Q ss_pred HHHHhchHHHHHHHHHhcCHHHHHHHhccccc
Q 006041 578 SFERAGRYDIARALEKWGGLHEVSRLLSLKLR 609 (663)
Q Consensus 578 ~l~~agR~Dl~~Al~~~GG~~~va~~lg~~~~ 609 (663)
.+.+..|.=|..||+++|....+|+.||+.-+
T Consensus 17 ~l~~~Er~~I~~aL~~~gn~~~aA~~LGIsr~ 48 (61)
T 1g2h_A 17 IIGFYEAQVLKLFYAEYPSTRKLAQRLGVSHT 48 (61)
T ss_dssp SCSHHHHHHHHHHHHHSCSHHHHHHHTTSCTH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHhCCCHH
Confidence 34556678899999999989999999999643
No 171
>2yqf_A Ankyrin-1; death domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yvi_A
Probab=39.07 E-value=14 Score=32.54 Aligned_cols=82 Identities=16% Similarity=0.290 Sum_probs=46.2
Q ss_pred chhhhHHHHHHHHHHHHHHhCCCCCCCCHHHHHhcCcccHHHHHHHhcCHHHHHHHcCchhhh----cccCCCCccCChH
Q 006041 478 GLQTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDVEKAITRMGGFRRMASLMNLALAY----KHRKPKGYWDNLE 553 (663)
Q Consensus 478 g~~~~~~~L~~eL~~f~~~~G~~g~mP~~~~Lr~~gr~dl~~aI~~~GG~~~vA~~lg~~~a~----~~r~p~gyw~~~~ 553 (663)
|.+.+.+.++.-|..++...|. .|..+|..||++-.- +...| .
T Consensus 9 ~~~~~~~~~~~~~~~ia~~lg~--------------------------~Wk~LAr~Lg~s~~~I~~I~~~~p-------~ 55 (111)
T 2yqf_A 9 GSLSGTEQAEMKMAVISEHLGL--------------------------SWAELARELQFSVEDINRIRVENP-------N 55 (111)
T ss_dssp TCCSCSHHHHHHHHHHHHHHTT--------------------------THHHHHHHTTCCHHHHHHHHHHSC-------S
T ss_pred ccCchHhHHHHHHHHHHHHHhh--------------------------hHHHHHHHcCCCHHHHHHHHHHCC-------C
Confidence 4455666677766666555552 488999999998431 11122 2
Q ss_pred HHHHHHHHHHHHh----CCCCCCCCCHHHHHHhchHHHHHHHH
Q 006041 554 NLEEEISRFQRSW----GMDPSFMPSRKSFERAGRYDIARALE 592 (663)
Q Consensus 554 ~l~~el~~f~~~~----g~~~~~mPt~~~l~~agR~Dl~~Al~ 592 (663)
++.+...+....| |....+-=-..-|+++||.||+..|+
T Consensus 56 ~~~eq~~~mL~~W~~~~g~~AT~~~L~~aL~~i~r~diae~l~ 98 (111)
T 2yqf_A 56 SLLEQSVALLNLWVIREGQNANMENLYTALQSIDRGEIVNMLE 98 (111)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHTTCCHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHcCcHHHHHHHH
Confidence 3444444444444 44322222244566678888777765
No 172
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=38.84 E-value=19 Score=33.50 Aligned_cols=51 Identities=22% Similarity=0.361 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCcccHH---HHHHHhcCHHHH---------HHHcCch
Q 006041 483 IEVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVDVE---KAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 483 ~~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~dl~---~aI~~~GG~~~v---------A~~lg~~ 537 (663)
-+.--..|.+|+...|..- ..|. +.....||+ .+|.++|||.+| |++||+.
T Consensus 35 ~~~Fl~~L~~F~~~rG~pl~~~P~----i~gk~vDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~ 98 (145)
T 2kk0_A 35 RKEFLDDLFSFMQKRGTPVNRIPI----MAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLP 98 (145)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSCCE----ETTEECCHHHHHHHHHHHTCHHHHHHHTCHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCCcccee----ECCEEecHHHHHHHHHHhCCHHHhcccCcHHHHHHHhCCC
Confidence 4566789999999998631 3454 344556655 699999998876 6666665
No 173
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=38.74 E-value=26 Score=30.46 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=38.3
Q ss_pred hHHH-HHHHHHHHHHHhCCCCCC-CCHHHHHhcCcccHHHHHHHhcC-HHHHHHHcCch
Q 006041 482 NIEV-LKAELLEFISKHGQEGFM-PMRKQLRKHGRVDVEKAITRMGG-FRRMASLMNLA 537 (663)
Q Consensus 482 ~~~~-L~~eL~~f~~~~G~~g~m-P~~~~Lr~~gr~dl~~aI~~~GG-~~~vA~~lg~~ 537 (663)
+|+. +++-|+.|...+...... +-...|.+.-+.-|..|+.++|| ..++|+.||++
T Consensus 26 ~l~~~v~~~l~~~~~~L~g~~~~~~l~~~l~~~Er~~I~~aL~~~~gn~~~AA~~LGIs 84 (98)
T 1eto_A 26 PLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTLGNQTRAALMMGIN 84 (98)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHccCCCCcchHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhCCC
Confidence 5666 778888888776433211 12233555667778889999876 46899999998
No 174
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=36.41 E-value=23 Score=29.05 Aligned_cols=44 Identities=27% Similarity=0.397 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHHHhCCCCCCCCCHHHHHHh-chHHHHHHHHHhcCHHHH
Q 006041 551 NLENLEEEISRFQRSWGMDPSFMPSRKSFERA-GRYDIARALEKWGGLHEV 600 (663)
Q Consensus 551 ~~~~l~~el~~f~~~~g~~~~~mPt~~~l~~a-gR~Dl~~Al~~~GG~~~v 600 (663)
++..|-.|...|....|+ |.+++..- -+.+|...++++||+.+|
T Consensus 19 ~~~glp~eW~~ll~~sGI------s~~~~k~~et~~~I~~F~~~~gG~eav 63 (65)
T 2lnh_A 19 DLNNLDPELKNLFDMCGI------SEAQLKDRETSKVIYDFIEKTGGVEAV 63 (65)
T ss_dssp CGGGCCTTHHHHHHHHTC------CHHHHTCTTTHHHHHHHHHHHCCHHHH
T ss_pred CCcCCCHHHHHHHHHcCC------CHHHHHCHHHHHHHHHHHHHcCCcccc
Confidence 467788889999999887 46777433 378999999999999877
No 175
>1b9m_A Protein (mode); DNA-binding, gene regulation, winged helix turn helix, molybdate, OB fold, transcription; 1.75A {Escherichia coli} SCOP: a.4.5.8 b.40.6.2 b.40.6.2 PDB: 1b9n_A 1o7l_A 1h9s_A 1h9r_A 1h9s_B
Probab=36.04 E-value=11 Score=36.94 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=21.8
Q ss_pred ccHHHHHHHhcCHHHHHHHcCchh
Q 006041 515 VDVEKAITRMGGFRRMASLMNLAL 538 (663)
Q Consensus 515 ~dl~~aI~~~GG~~~vA~~lg~~~ 538 (663)
..+..+|..+|.|.+.|++||++.
T Consensus 25 l~~f~~v~~~gs~~~aa~~l~~s~ 48 (265)
T 1b9m_A 25 ISLLKHIALSGSISQGAKDAGISY 48 (265)
T ss_dssp HHHHHHHHHHSSHHHHHHHHTCCH
T ss_pred HHHHHHHHHhCCHHHHHHHhCCCH
Confidence 567889999999999999999993
No 176
>2gf5_A FADD protein; death domain, death effector domain, apoptosis, death- inducing signaling complex; NMR {Homo sapiens} SCOP: a.77.1.2 a.77.1.4
Probab=35.49 E-value=33 Score=32.99 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=34.8
Q ss_pred CHHHHHHHcCchhhh----cccCCCCccCChHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHhchHHHHHHHHHh
Q 006041 526 GFRRMASLMNLALAY----KHRKPKGYWDNLENLEEEISRFQRSWGMDPSFMPS----RKSFERAGRYDIARALEKW 594 (663)
Q Consensus 526 G~~~vA~~lg~~~a~----~~r~p~gyw~~~~~l~~el~~f~~~~g~~~~~mPt----~~~l~~agR~Dl~~Al~~~ 594 (663)
.|+.+|.+||++-+- +...|+ ++.+.+.+....|-..-+..+| ...|+++||.|++..|+..
T Consensus 111 ~Wk~Lar~Lgl~~~~I~~I~~~~~~-------d~~eq~~~mL~~W~~r~g~~At~~~L~~AL~~~~~~diae~l~~~ 180 (191)
T 2gf5_A 111 DWRRLARQLKVSDTKIDSIEDRYPR-------NLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV 180 (191)
T ss_dssp THHHHHHHTTCCHHHHHHHHHHSSS-------CSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHcCCCHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 578999999988421 011121 2334444444445211122445 4566778999999888753
No 177
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=34.11 E-value=22 Score=31.08 Aligned_cols=48 Identities=13% Similarity=0.270 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 554 NLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 554 ~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
+--+.|..|+++.|.+....|... =....=|.|..+|.++||+..|.+
T Consensus 6 ~Fl~~L~~F~~~rg~~~~~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~~ 53 (107)
T 1ig6_A 6 AFLVALYKYMKERKTPIERIPYLG-FKQINLWTMFQAAQKLGGYETITA 53 (107)
T ss_dssp HHHHHHHHHHHTTTCCGGGCCCSS-SSSCCHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCceEC-CEeecHHHHHHHHHHhcCHHHhcc
Confidence 345678899999998765667542 122233789999999999998743
No 178
>2hin_A GP39, repressor protein; transcription factor, dimer interface, helix-turn-helix; 1.05A {Enterobacteria phage N15} PDB: 3qws_A
Probab=33.93 E-value=25 Score=29.05 Aligned_cols=23 Identities=4% Similarity=0.128 Sum_probs=20.2
Q ss_pred HHHHHHHhcCHHHHHHHhccccc
Q 006041 587 IARALEKWGGLHEVSRLLSLKLR 609 (663)
Q Consensus 587 l~~Al~~~GG~~~va~~lg~~~~ 609 (663)
+..||+.|||..++|+.||...+
T Consensus 3 ~~~ai~~~G~~~~lA~~lGVs~~ 25 (71)
T 2hin_A 3 PEELVRHFGDVEKAAVGVGVTPG 25 (71)
T ss_dssp HHHHHHHHSSHHHHHHHHTSCHH
T ss_pred HHHHHHHHCCHHHHHHHHCCCHH
Confidence 56899999999999999998654
No 179
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=33.67 E-value=26 Score=29.95 Aligned_cols=48 Identities=15% Similarity=0.297 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHHH
Q 006041 554 NLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRL 603 (663)
Q Consensus 554 ~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~~ 603 (663)
+--+.|..|+++.|.+. ..|... =....=|.|..+|.++||+..|.+.
T Consensus 10 ~F~~~L~~F~~~~g~~l-~~P~i~-gk~lDL~~Ly~~V~~~GG~~~V~~~ 57 (96)
T 2jxj_A 10 DFLDQLAKFWELQGSTL-KIPVVE-RKILDLYALSKIVASKGGFEMVTKE 57 (96)
T ss_dssp HHHHHHHHHHHHHTCCC-CCCEET-TEECCCHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC-CCCcCC-CEeccHHHHHHHHHHcCCHHHHccC
Confidence 44567889999999775 457531 1222238999999999999887543
No 180
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=33.57 E-value=34 Score=31.76 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 553 ENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 553 ~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
++--+.|..|+++.|.+....|... =....=|.|..+|.+.||+..|.+
T Consensus 36 ~~Fl~~L~~F~~~rG~pl~~~P~i~-gk~vDL~~Ly~~V~~~GG~~~V~~ 84 (145)
T 2kk0_A 36 KEFLDDLFSFMQKRGTPVNRIPIMA-KQVLDLFMLYVLVTEKGGLVEVIN 84 (145)
T ss_dssp HHHHHHHHHHHHHTTCCCSSCCEET-TEECCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccceeEC-CEEecHHHHHHHHHHhCCHHHhcc
Confidence 4555678999999998766677642 223333788999999999998743
No 181
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=29.52 E-value=33 Score=31.17 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHHHH
Q 006041 552 LENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSR 602 (663)
Q Consensus 552 ~~~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~va~ 602 (663)
.+.|+ .|..|+++.|.+....|... =....=|-|.++|.+.||+..|.+
T Consensus 14 ~~Fl~-~L~~F~~~rGtpl~~~P~i~-gk~lDL~~Ly~~V~~~GG~~~Vt~ 62 (121)
T 2rq5_A 14 VQRLA-CIKKHLRSQGITMDELPLIG-GCELDLACFFRLINEMGGMQQVTD 62 (121)
T ss_dssp HHHHH-HHHHHHHHTTCCCSSCCEET-TEECCHHHHHHHHHHTTSHHHHHH
T ss_pred HHHHH-HHHHHHHHcCCCCCCCCcCC-CEeccHHHHHHHHHHcCcHHHhcc
Confidence 45555 49999999998866677652 222223788999999999988755
No 182
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.19 E-value=44 Score=30.08 Aligned_cols=53 Identities=13% Similarity=0.254 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhchHHHHHHHHHhcCHHHH---------HHHhcccc
Q 006041 554 NLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEV---------SRLLSLKL 608 (663)
Q Consensus 554 ~l~~el~~f~~~~g~~~~~mPt~~~l~~agR~Dl~~Al~~~GG~~~v---------a~~lg~~~ 608 (663)
+--+.|..|+++.|.+. ..|... =+...=|.|.++|.++||+..| |+.||+..
T Consensus 16 ~Fl~~L~~F~~~rG~~l-~~P~i~-gk~lDLy~Ly~~V~~~GG~~~V~~~k~W~~V~~~lg~~~ 77 (122)
T 2eqy_A 16 NFLDQIAKYWELQGSTL-KIPHVE-RKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAP 77 (122)
T ss_dssp HHHHHHHHHHHHHTCCC-CCCBSS-SSBCCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHcCCCC-CCCeEC-CEeccHHHHHHHHHHccCHHHHcCCCcHHHHHHHhCCCC
Confidence 44567889999999875 566441 1222237899999999999876 66777754
No 183
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=27.69 E-value=38 Score=36.69 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=30.1
Q ss_pred eEEEEEEEccCHHHHHHHhhCchhhhhcccccee
Q 006041 95 RIKAEMLVNADVDSVWNALTDYERLADFVPNLAC 128 (663)
Q Consensus 95 rV~a~i~i~ap~e~VW~vLTDYe~la~fiP~l~~ 128 (663)
++..+..|++|++.||+..+|-++|.+..|....
T Consensus 2 ~~~~~~~i~~p~~~v~~~~~~~~~~~~~~p~~~~ 35 (516)
T 3oh8_A 2 SLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIP 35 (516)
T ss_dssp CEEEEEEESSCHHHHHHHHHSTTHHHHHSCTTSS
T ss_pred eEEEEEEccCCHHHHHHHhcCcchHHHhCCCCCc
Confidence 3677899999999999999999999999996555
No 184
>1wmg_A Netrin receptor UNC5H2; six helix bundle, death domain, apoptosis, structural genomi NPPSFA; 2.10A {Mus musculus} SCOP: a.77.1.2
Probab=27.46 E-value=27 Score=30.56 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=35.5
Q ss_pred hcCHHHHHHHcCchhhhcccCCCCccCChHHHHHHHHHHH-HHhCCCCCCCCCHH----HHHHhchHHHHHHHHHhc
Q 006041 524 MGGFRRMASLMNLALAYKHRKPKGYWDNLENLEEEISRFQ-RSWGMDPSFMPSRK----SFERAGRYDIARALEKWG 595 (663)
Q Consensus 524 ~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~~el~~f~-~~~g~~~~~mPt~~----~l~~agR~Dl~~Al~~~G 595 (663)
..+|+.+|++||+.- + -.|++.-.+=-.+|+++- .+.+- -.|.. -|++.||+|.+..|+.+|
T Consensus 31 g~dWr~LA~~Lg~~~-~-----i~~~~~~~SPt~~LL~~W~~~~~~----~~tv~~L~~~L~~mgR~Da~~~L~~~~ 97 (103)
T 1wmg_A 31 GNDWRLLAQKLSMDR-Y-----LNYFATKASPTGVILDLWEARQQD----DGDLNSLASALEEMGKSEMLVAMATDG 97 (103)
T ss_dssp TSSHHHHHHHTTCGG-G-----HHHHHTSSCHHHHHHHHHHHHCCS----TTTHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred ccCHHHHHHHcCChH-H-----HHHHHcCCCHHHHHHHHHHHhcCC----CCcHHHHHHHHHHcCCHHHHHHHHccC
Confidence 458999999999982 1 111111111123333322 22211 12544 567889999999999885
No 185
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=26.05 E-value=61 Score=29.39 Aligned_cols=49 Identities=18% Similarity=0.408 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhCCCC-CCCCHHHHHhcCcccH---HHHHHHhcCHHHH---------HHHcCch
Q 006041 484 EVLKAELLEFISKHGQEG-FMPMRKQLRKHGRVDV---EKAITRMGGFRRM---------ASLMNLA 537 (663)
Q Consensus 484 ~~L~~eL~~f~~~~G~~g-~mP~~~~Lr~~gr~dl---~~aI~~~GG~~~v---------A~~lg~~ 537 (663)
+-|++ |.+|+.+.|..- ..|.. .....|| +++|.++|||.+| |+.||+.
T Consensus 15 ~Fl~~-L~~F~~~rGtpl~~~P~i----~gk~lDL~~Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p 76 (121)
T 2rq5_A 15 QRLAC-IKKHLRSQGITMDELPLI----GGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIP 76 (121)
T ss_dssp HHHHH-HHHHHHHTTCCCSSCCEE----TTEECCHHHHHHHHHHTTSHHHHHHTTCHHHHHHHTCCC
T ss_pred HHHHH-HHHHHHHcCCCCCCCCcC----CCEeccHHHHHHHHHHcCcHHHhcccCcHHHHHHHhCCC
Confidence 34554 999999999752 14543 3444555 5599999998665 6667665
No 186
>3fzv_A Probable transcriptional regulator; LYSR, structural genomics, PSI-2, structure initiative; 2.71A {Pseudomonas aeruginosa PA01}
Probab=25.15 E-value=27 Score=33.49 Aligned_cols=22 Identities=9% Similarity=0.045 Sum_probs=19.7
Q ss_pred HHHHHHHhcCHHHHHHHcCchh
Q 006041 517 VEKAITRMGGFRRMASLMNLAL 538 (663)
Q Consensus 517 l~~aI~~~GG~~~vA~~lg~~~ 538 (663)
...+|.++|.|.++|++||++.
T Consensus 11 ~f~~v~~~~s~s~AA~~L~isq 32 (306)
T 3fzv_A 11 YFVTTVECGSVAEASRKLYIAQ 32 (306)
T ss_dssp HHHHHHHSSSHHHHHHHHTCCC
T ss_pred HHHHHHHhCCHHHHHHHhCCCc
Confidence 4669999999999999999983
No 187
>1uth_A LYSR-type regulatory protein; transcription regulation, transcriptional regulator; 2.2A {Burkholderia SP} SCOP: c.94.1.1 PDB: 1utb_A 1utb_B 1uth_B 2uyf_A 2uye_A
Probab=24.65 E-value=16 Score=35.98 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=0.0
Q ss_pred CcccHHHHHHHhcCHHHHHHHcCchhhhcccCCCCccCChHHHHHHHHH--HHHH
Q 006041 513 GRVDVEKAITRMGGFRRMASLMNLALAYKHRKPKGYWDNLENLEEEISR--FQRS 565 (663)
Q Consensus 513 gr~dl~~aI~~~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~~el~~--f~~~ 565 (663)
...-..-+|.++|.|.++|++||++ +..--..+..||+||-. |.+.
T Consensus 17 ~~L~~f~~v~~~gs~t~AA~~L~is-------q~avS~~I~~LE~~lg~~Lf~R~ 64 (315)
T 1uth_A 17 NLLVVFNQLLLDRSVSTAGEKLGLT-------QPAVSNSLKRLRTALNDDLFLRT 64 (315)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHhCCC-------HHHHHHHHHHHHHHhCCcceeec
Confidence 3445677999999999999999999 34455568888888754 6653
No 188
>2hin_A GP39, repressor protein; transcription factor, dimer interface, helix-turn-helix; 1.05A {Enterobacteria phage N15} PDB: 3qws_A
Probab=24.24 E-value=43 Score=27.60 Aligned_cols=23 Identities=13% Similarity=0.229 Sum_probs=20.8
Q ss_pred cHHHHHHHhcCHHHHHHHcCchh
Q 006041 516 DVEKAITRMGGFRRMASLMNLAL 538 (663)
Q Consensus 516 dl~~aI~~~GG~~~vA~~lg~~~ 538 (663)
.+.+||...||-.++|+.||.+.
T Consensus 2 ~~~~ai~~~G~~~~lA~~lGVs~ 24 (71)
T 2hin_A 2 KPEELVRHFGDVEKAAVGVGVTP 24 (71)
T ss_dssp CHHHHHHHHSSHHHHHHHHTSCH
T ss_pred cHHHHHHHHCCHHHHHHHHCCCH
Confidence 36789999999999999999993
No 189
>1ngr_A P75 low affinity neurotrophin receptor; intracellular domain, death domain; NMR {Rattus norvegicus} SCOP: a.77.1.2
Probab=23.24 E-value=73 Score=26.89 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=33.2
Q ss_pred hcCHHHHHHHcCchhhhcccCCCCccCChHHHH---HHHHHHHHHhCCCCCCCCCH----HHHHHhchHHHHHHHH
Q 006041 524 MGGFRRMASLMNLALAYKHRKPKGYWDNLENLE---EEISRFQRSWGMDPSFMPSR----KSFERAGRYDIARALE 592 (663)
Q Consensus 524 ~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~---~el~~f~~~~g~~~~~mPt~----~~l~~agR~Dl~~Al~ 592 (663)
..+|+..|++||++-.+ +++.+ +--....+.|...++ -|. .-|++.||.|++..|.
T Consensus 21 g~dW~~LA~~Lg~~~~~-----------I~~~~~~~~pt~~lL~~W~~r~~--atv~~L~~aL~~igR~Dv~~~L~ 83 (85)
T 1ngr_A 21 GDTWRHLAGELGYQPEH-----------IDSFTHEACPVRALLASWGAQDS--ATLDALLAALRRIQRADIVESLC 83 (85)
T ss_dssp TTHHHHHHHHTTCCHHH-----------HHHHHHSSCHHHHHHHHGGGSTT--CBHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHcCCCHHH-----------HHHHHcCCCHHHHHHHHHHhCCC--CCHHHHHHHHHHcCcHHHHHHHc
Confidence 55789999999998321 22222 112334455643222 343 4566889999988774
No 190
>3szp_A Transcriptional regulator, LYSR family; winged helix-turn helix, DNA-binding, transcription factor; 2.20A {Vibrio cholerae} PDB: 3t1b_B
Probab=22.94 E-value=26 Score=33.03 Aligned_cols=39 Identities=8% Similarity=0.244 Sum_probs=28.4
Q ss_pred HHHHHHHhcCHHHHHHHcCchhhhcccCCCCccCChHHHHHHHHHHHHHhCCC
Q 006041 517 VEKAITRMGGFRRMASLMNLALAYKHRKPKGYWDNLENLEEEISRFQRSWGMD 569 (663)
Q Consensus 517 l~~aI~~~GG~~~vA~~lg~~~a~~~r~p~gyw~~~~~l~~el~~f~~~~g~~ 569 (663)
..-+|.++|.|.++|++||++. -++-.-|+++=+++|.+
T Consensus 8 ~f~~v~~~~s~t~AA~~L~isq--------------~avS~~i~~LE~~lg~~ 46 (291)
T 3szp_A 8 LFRLVVENGSYTSTSKKTMIPV--------------ATITRRIQALEDSLNLR 46 (291)
T ss_dssp HHHHHHHHSSHHHHHHHHTCCH--------------HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCHHHHHHHhCCCH--------------HHHHHHHHHHHHHhCCc
Confidence 4668999999999999999994 34445555555555544
No 191
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=22.44 E-value=40 Score=26.39 Aligned_cols=35 Identities=9% Similarity=0.152 Sum_probs=26.6
Q ss_pred CCCHHHHHhcCcccHHHHHHHhcCHH-HHHHHcCch
Q 006041 503 MPMRKQLRKHGRVDVEKAITRMGGFR-RMASLMNLA 537 (663)
Q Consensus 503 mP~~~~Lr~~gr~dl~~aI~~~GG~~-~vA~~lg~~ 537 (663)
.|-...|.+.-+.-|.+|+..+||-. ++|+.||++
T Consensus 10 ~~l~~~l~~~E~~~i~~aL~~~~gn~~~aA~~LGis 45 (63)
T 3e7l_A 10 KELKEAKKEFEKIFIEEKLREYDYDLKRTAEEIGID 45 (63)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHCcC
Confidence 45555566666677888999988754 899999998
Done!