Query 006050
Match_columns 663
No_of_seqs 207 out of 3176
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 14:38:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 1E-28 3.5E-33 249.3 27.5 292 241-662 1-367 (439)
2 2x6q_A Trehalose-synthase TRET 100.0 1.9E-29 6.5E-34 257.3 19.6 319 208-661 6-351 (416)
3 3okp_A GDP-mannose-dependent a 100.0 3.5E-28 1.2E-32 242.6 25.9 285 240-662 2-316 (394)
4 3c48_A Predicted glycosyltrans 100.0 2.8E-27 9.7E-32 241.8 29.2 292 242-661 20-361 (438)
5 2jjm_A Glycosyl transferase, g 100.0 8.1E-27 2.8E-31 236.3 27.0 283 242-663 15-322 (394)
6 1rzu_A Glycogen synthase 1; gl 100.0 1.7E-27 5.9E-32 248.1 21.9 302 243-661 1-401 (485)
7 2r60_A Glycosyl transferase, g 100.0 1.5E-27 5.1E-32 250.6 21.3 298 242-661 7-394 (499)
8 2qzs_A Glycogen synthase; glyc 100.0 4.5E-27 1.5E-31 245.0 22.6 301 243-661 1-402 (485)
9 3oy2_A Glycosyltransferase B73 99.9 3.7E-27 1.3E-31 239.6 19.4 277 243-661 1-309 (413)
10 2iw1_A Lipopolysaccharide core 99.9 3.7E-27 1.3E-31 234.3 17.2 276 243-662 1-307 (374)
11 2iuy_A Avigt4, glycosyltransfe 99.9 1.3E-25 4.4E-30 223.3 18.7 251 240-662 1-278 (342)
12 3vue_A GBSS-I, granule-bound s 99.9 2.6E-24 8.9E-29 235.0 24.2 194 356-662 236-438 (536)
13 2gek_A Phosphatidylinositol ma 99.9 4.4E-24 1.5E-28 214.5 19.8 272 242-661 20-319 (406)
14 2x0d_A WSAF; GT4 family, trans 99.9 2.4E-22 8.3E-27 211.7 23.4 269 242-658 46-347 (413)
15 3s28_A Sucrose synthase 1; gly 99.9 4.7E-23 1.6E-27 236.7 15.5 345 205-662 237-701 (816)
16 1f0k_A MURG, UDP-N-acetylgluco 99.9 3.8E-20 1.3E-24 184.7 24.4 254 243-660 7-285 (364)
17 2vsy_A XCC0866; transferase, g 99.9 4.5E-22 1.5E-26 211.9 11.2 266 242-658 205-492 (568)
18 1vgv_A UDP-N-acetylglucosamine 99.8 1.7E-17 5.8E-22 166.7 22.5 280 243-660 1-313 (384)
19 2hy7_A Glucuronosyltransferase 99.8 4.8E-18 1.6E-22 177.3 18.3 57 599-657 258-323 (406)
20 3beo_A UDP-N-acetylglucosamine 99.8 1E-17 3.5E-22 167.4 17.5 273 242-660 8-313 (375)
21 2bfw_A GLGA glycogen synthase; 99.7 1.4E-17 4.7E-22 153.5 12.8 122 430-661 24-151 (200)
22 1uqt_A Alpha, alpha-trehalose- 99.7 3.2E-16 1.1E-20 170.0 22.0 234 311-661 123-392 (482)
23 2xci_A KDO-transferase, 3-deox 99.7 1.2E-16 4.1E-21 165.6 17.3 254 247-660 43-314 (374)
24 3qhp_A Type 1 capsular polysac 99.7 2E-16 6.9E-21 142.0 10.3 65 593-662 45-113 (166)
25 2f9f_A First mannosyl transfer 99.6 1.5E-16 5.2E-21 146.7 7.8 65 595-661 65-133 (177)
26 1v4v_A UDP-N-acetylglucosamine 99.6 1.2E-15 4.1E-20 153.6 14.9 269 243-660 6-305 (376)
27 3t5t_A Putative glycosyltransf 99.6 4.2E-15 1.4E-19 162.9 14.3 181 359-661 205-410 (496)
28 3nb0_A Glycogen [starch] synth 99.6 3.8E-14 1.3E-18 160.6 21.4 65 595-661 475-554 (725)
29 3dzc_A UDP-N-acetylglucosamine 99.3 5.2E-10 1.8E-14 117.2 25.4 283 238-659 21-337 (396)
30 3otg_A CALG1; calicheamicin, T 99.2 5.4E-10 1.9E-14 113.5 21.6 49 603-658 289-337 (412)
31 3s2u_A UDP-N-acetylglucosamine 99.1 1E-08 3.4E-13 106.0 21.4 56 595-658 226-281 (365)
32 3ot5_A UDP-N-acetylglucosamine 99.1 6.2E-09 2.1E-13 109.6 19.4 58 592-659 271-331 (403)
33 4fzr_A SSFS6; structural genom 98.9 1.9E-08 6.3E-13 102.8 16.6 48 603-657 281-328 (398)
34 2iyf_A OLED, oleandomycin glyc 98.8 2.8E-07 9.5E-12 94.8 20.8 48 604-658 281-328 (430)
35 3tsa_A SPNG, NDP-rhamnosyltran 98.8 7.2E-08 2.5E-12 97.8 14.9 48 603-657 267-314 (391)
36 3oti_A CALG3; calicheamicin, T 98.8 1.6E-07 5.6E-12 96.0 17.1 46 603-655 280-325 (398)
37 3rhz_A GTF3, nucleotide sugar 98.7 1.3E-06 4.5E-11 90.9 20.6 57 604-661 213-276 (339)
38 3ia7_A CALG4; glycosysltransfe 98.6 1.3E-06 4.4E-11 88.0 19.0 46 604-656 279-324 (402)
39 4hwg_A UDP-N-acetylglucosamine 98.5 8.6E-07 3E-11 93.3 14.3 46 605-657 262-309 (385)
40 2p6p_A Glycosyl transferase; X 98.4 1.3E-05 4.4E-10 81.2 19.0 46 604-657 262-307 (384)
41 3rsc_A CALG2; TDP, enediyne, s 98.4 8.7E-05 3E-09 75.8 24.6 47 603-656 294-340 (415)
42 3q3e_A HMW1C-like glycosyltran 98.4 6E-07 2.1E-11 101.3 9.3 56 600-658 493-550 (631)
43 3h4t_A Glycosyltransferase GTF 98.0 0.0005 1.7E-08 71.3 20.7 48 603-657 265-312 (404)
44 4amg_A Snogd; transferase, pol 97.9 0.00058 2E-08 69.0 19.4 48 603-657 285-332 (400)
45 2o6l_A UDP-glucuronosyltransfe 97.6 0.0001 3.5E-09 67.0 7.8 47 604-657 66-114 (170)
46 2c4m_A Glycogen phosphorylase; 97.4 0.0021 7.1E-08 74.5 16.7 56 603-658 590-649 (796)
47 1l5w_A Maltodextrin phosphoryl 97.2 0.0035 1.2E-07 72.6 15.4 57 603-659 600-660 (796)
48 2gj4_A Glycogen phosphorylase, 97.0 0.011 3.8E-07 68.8 16.0 55 604-658 625-683 (824)
49 2yjn_A ERYCIII, glycosyltransf 96.8 0.0022 7.5E-08 66.8 8.4 48 603-657 316-363 (441)
50 4gyw_A UDP-N-acetylglucosamine 96.3 0.011 3.7E-07 67.4 9.8 63 592-657 565-630 (723)
51 1psw_A ADP-heptose LPS heptosy 96.0 0.022 7.4E-07 57.1 9.3 42 607-655 243-286 (348)
52 3hbm_A UDP-sugar hydrolase; PS 95.4 0.028 9.5E-07 57.4 7.6 52 595-656 200-251 (282)
53 2iya_A OLEI, oleandomycin glyc 95.0 0.027 9.2E-07 58.0 6.1 47 604-657 303-349 (424)
54 1iir_A Glycosyltransferase GTF 94.2 0.047 1.6E-06 56.3 5.6 48 603-657 282-329 (415)
55 1rrv_A Glycosyltransferase GTF 93.8 0.067 2.3E-06 55.1 5.8 48 603-657 283-330 (416)
56 3tov_A Glycosyl transferase fa 93.4 0.46 1.6E-05 48.9 11.2 53 595-655 232-286 (349)
57 2jzc_A UDP-N-acetylglucosamine 83.8 0.85 2.9E-05 45.3 4.4 45 607-657 115-160 (224)
58 2gt1_A Lipopolysaccharide hept 83.0 2.1 7.3E-05 42.6 6.9 51 595-655 226-278 (326)
59 2iya_A OLEI, oleandomycin glyc 79.2 2.6 9E-05 43.1 6.2 55 240-299 10-64 (424)
60 3eag_A UDP-N-acetylmuramate:L- 73.9 9.5 0.00033 38.9 8.6 72 242-321 4-76 (326)
61 1ygp_A Yeast glycogen phosphor 73.6 37 0.0013 40.2 14.2 56 603-658 683-742 (879)
62 3l7i_A Teichoic acid biosynthe 71.5 73 0.0025 35.8 15.7 47 603-656 595-641 (729)
63 2bw0_A 10-FTHFDH, 10-formyltet 71.2 8.1 0.00028 40.3 7.4 73 239-318 19-106 (329)
64 3e8x_A Putative NAD-dependent 69.4 17 0.00057 34.1 8.6 72 241-320 20-93 (236)
65 2yjn_A ERYCIII, glycosyltransf 68.1 4.8 0.00016 41.7 4.9 54 242-300 20-73 (441)
66 1iir_A Glycosyltransferase GTF 62.9 9.8 0.00033 39.0 6.0 52 243-299 1-52 (415)
67 4dzz_A Plasmid partitioning pr 60.8 32 0.0011 31.2 8.5 59 243-301 1-61 (206)
68 1rrv_A Glycosyltransferase GTF 59.1 7.5 0.00026 39.8 4.3 52 243-299 1-52 (416)
69 2c1x_A UDP-glucose flavonoid 3 58.2 9.6 0.00033 40.6 5.1 45 606-657 325-371 (456)
70 3hn7_A UDP-N-acetylmuramate-L- 57.7 26 0.00088 38.3 8.5 72 242-321 19-90 (524)
71 2pq6_A UDP-glucuronosyl/UDP-gl 52.6 13 0.00045 39.5 5.1 48 605-657 352-399 (482)
72 3dfz_A SIRC, precorrin-2 dehyd 52.2 18 0.0006 35.9 5.5 84 227-320 14-100 (223)
73 3hbf_A Flavonoid 3-O-glucosylt 50.9 16 0.00056 39.4 5.5 47 605-656 326-372 (454)
74 2acv_A Triterpene UDP-glucosyl 49.8 17 0.00059 38.6 5.4 45 606-657 332-378 (463)
75 3ius_A Uncharacterized conserv 49.6 40 0.0014 32.2 7.5 67 242-319 5-71 (286)
76 3lk7_A UDP-N-acetylmuramoylala 48.5 26 0.0009 37.2 6.6 71 242-321 9-82 (451)
77 3h2s_A Putative NADH-flavin re 45.0 34 0.0012 31.4 6.0 61 258-320 10-71 (224)
78 3l4e_A Uncharacterized peptida 44.1 44 0.0015 32.3 6.8 66 588-659 43-123 (206)
79 3q0i_A Methionyl-tRNA formyltr 43.7 36 0.0012 35.3 6.5 72 240-318 5-92 (318)
80 3gem_A Short chain dehydrogena 42.6 39 0.0013 32.9 6.2 73 242-320 26-108 (260)
81 3b6i_A Flavoprotein WRBA; flav 42.4 1E+02 0.0034 28.0 8.7 73 243-320 2-77 (198)
82 3i6i_A Putative leucoanthocyan 40.1 25 0.00086 35.0 4.5 75 240-320 8-92 (346)
83 3ruf_A WBGU; rossmann fold, UD 39.1 1.2E+02 0.0041 29.8 9.3 73 241-320 24-109 (351)
84 3ew7_A LMO0794 protein; Q8Y8U8 39.0 60 0.0021 29.4 6.6 59 258-319 10-69 (221)
85 4hv4_A UDP-N-acetylmuramate--L 38.2 40 0.0014 36.4 6.1 70 243-322 23-92 (494)
86 4e3z_A Putative oxidoreductase 36.9 45 0.0015 32.2 5.7 37 238-279 21-57 (272)
87 2z1m_A GDP-D-mannose dehydrata 35.9 75 0.0026 30.9 7.1 33 241-279 2-34 (345)
88 1jx7_A Hypothetical protein YC 35.4 64 0.0022 27.1 5.8 38 243-280 2-42 (117)
89 2ark_A Flavodoxin; FMN, struct 35.0 50 0.0017 30.4 5.5 37 243-281 5-43 (188)
90 3slg_A PBGP3 protein; structur 34.9 66 0.0022 32.1 6.7 83 229-319 12-99 (372)
91 2a5l_A Trp repressor binding p 34.9 60 0.002 29.6 5.9 41 240-282 3-44 (200)
92 3tqq_A Methionyl-tRNA formyltr 34.7 41 0.0014 34.8 5.2 71 241-318 1-87 (314)
93 3e9m_A Oxidoreductase, GFO/IDH 34.7 1.3E+02 0.0044 30.2 8.8 53 595-655 43-97 (330)
94 3k9g_A PF-32 protein; ssgcid, 34.5 47 0.0016 31.8 5.4 43 242-285 26-68 (267)
95 2vch_A Hydroquinone glucosyltr 33.9 44 0.0015 35.7 5.5 41 612-657 345-385 (480)
96 2pq6_A UDP-glucuronosyl/UDP-gl 33.9 35 0.0012 36.3 4.7 37 243-281 9-45 (482)
97 2x4g_A Nucleoside-diphosphate- 33.5 1.7E+02 0.0059 28.4 9.3 69 243-319 14-85 (342)
98 2x5o_A UDP-N-acetylmuramoylala 32.5 81 0.0028 33.3 7.2 71 241-321 4-74 (439)
99 4b4o_A Epimerase family protei 31.4 44 0.0015 32.4 4.6 25 255-279 7-31 (298)
100 3sju_A Keto reductase; short-c 31.4 31 0.0011 33.8 3.5 37 238-279 19-55 (279)
101 3qvo_A NMRA family protein; st 31.1 67 0.0023 30.2 5.7 63 255-319 30-96 (236)
102 1pjq_A CYSG, siroheme synthase 31.1 81 0.0028 33.9 7.0 69 242-320 12-81 (457)
103 3v8b_A Putative dehydrogenase, 30.7 33 0.0011 33.7 3.7 49 226-279 8-59 (283)
104 1ydg_A Trp repressor binding p 30.6 1.8E+02 0.006 26.9 8.5 40 242-283 6-46 (211)
105 3tfo_A Putative 3-oxoacyl-(acy 30.4 53 0.0018 32.2 5.0 34 241-279 2-35 (264)
106 3osu_A 3-oxoacyl-[acyl-carrier 30.3 56 0.0019 31.1 5.1 33 242-279 3-35 (246)
107 4gi5_A Quinone reductase; prot 30.3 85 0.0029 32.0 6.6 45 238-282 18-63 (280)
108 2wm3_A NMRA-like family domain 30.2 91 0.0031 30.1 6.6 62 259-320 16-81 (299)
109 1j6u_A UDP-N-acetylmuramate-al 30.0 49 0.0017 35.5 5.0 64 252-321 18-81 (469)
110 1fy2_A Aspartyl dipeptidase; s 29.8 1E+02 0.0035 29.9 6.9 67 587-659 46-123 (229)
111 1hdo_A Biliverdin IX beta redu 29.4 63 0.0021 28.9 5.0 71 241-319 2-75 (206)
112 1qgu_B Protein (nitrogenase mo 29.4 1E+02 0.0035 33.9 7.5 80 234-320 352-443 (519)
113 3r6d_A NAD-dependent epimerase 28.9 1.4E+02 0.0047 27.4 7.4 60 259-320 16-82 (221)
114 2r8r_A Sensor protein; KDPD, P 28.8 1E+02 0.0035 30.7 6.8 42 244-285 6-47 (228)
115 1ydw_A AX110P-like protein; st 28.7 1.7E+02 0.0059 29.6 8.6 55 595-654 44-100 (362)
116 2zki_A 199AA long hypothetical 28.7 82 0.0028 28.8 5.7 38 242-282 4-42 (199)
117 3klj_A NAD(FAD)-dependent dehy 28.5 55 0.0019 33.9 5.0 71 242-319 146-227 (385)
118 3oid_A Enoyl-[acyl-carrier-pro 28.0 64 0.0022 31.1 5.0 34 240-278 1-34 (258)
119 1qyc_A Phenylcoumaran benzylic 27.9 1.1E+02 0.0036 29.5 6.6 58 260-319 16-85 (308)
120 2gk4_A Conserved hypothetical 27.4 92 0.0031 31.1 6.2 59 260-321 31-94 (232)
121 4hs4_A Chromate reductase; tri 26.9 20 0.00069 34.2 1.2 42 240-281 4-46 (199)
122 2xj4_A MIPZ; replication, cell 26.6 88 0.003 30.7 5.8 41 242-282 3-43 (286)
123 3sxp_A ADP-L-glycero-D-mannohe 26.5 2.2E+02 0.0074 28.3 8.8 65 255-319 17-98 (362)
124 3i83_A 2-dehydropantoate 2-red 26.4 1.4E+02 0.0047 29.9 7.3 67 242-319 2-79 (320)
125 2rk3_A Protein DJ-1; parkinson 26.4 1.7E+02 0.0057 27.1 7.5 71 240-319 1-74 (197)
126 3end_A Light-independent proto 26.3 1.6E+02 0.0053 28.9 7.6 46 242-288 40-85 (307)
127 2b69_A UDP-glucuronate decarbo 26.2 2.1E+02 0.0072 28.1 8.5 64 255-320 34-100 (343)
128 3oqb_A Oxidoreductase; structu 26.2 86 0.0029 32.0 5.9 52 595-654 59-112 (383)
129 2q1w_A Putative nucleotide sug 26.2 1.4E+02 0.0047 29.4 7.2 64 255-319 28-97 (333)
130 1fmt_A Methionyl-tRNA FMet for 26.1 1E+02 0.0036 31.7 6.5 69 242-317 3-87 (314)
131 2qjw_A Uncharacterized protein 26.1 63 0.0021 27.6 4.2 37 242-278 3-39 (176)
132 2bka_A CC3, TAT-interacting pr 25.3 1.5E+02 0.0053 27.3 7.0 73 240-320 16-93 (242)
133 2ew8_A (S)-1-phenylethanol deh 25.2 1.1E+02 0.0036 29.2 6.0 20 260-279 19-38 (249)
134 3lqk_A Dipicolinate synthase s 25.0 55 0.0019 31.9 3.9 40 241-284 6-46 (201)
135 3rfo_A Methionyl-tRNA formyltr 24.9 90 0.0031 32.3 5.7 70 242-318 4-89 (317)
136 3ko8_A NAD-dependent epimerase 24.9 2E+02 0.0067 27.6 7.9 63 255-319 7-70 (312)
137 1e2b_A Enzyme IIB-cellobiose; 24.8 54 0.0018 28.6 3.5 42 590-632 18-59 (106)
138 3rpe_A MDAB, modulator of drug 24.5 1.7E+02 0.0058 28.7 7.4 50 233-282 16-70 (218)
139 3qjg_A Epidermin biosynthesis 24.4 45 0.0015 31.9 3.2 40 241-284 4-43 (175)
140 3kkl_A Probable chaperone prot 24.4 79 0.0027 31.2 5.1 42 240-281 1-51 (244)
141 3moi_A Probable dehydrogenase; 24.4 1.9E+02 0.0065 29.7 8.1 52 595-655 41-94 (387)
142 2d1p_A TUSD, hypothetical UPF0 24.3 1.3E+02 0.0043 27.6 6.0 38 242-279 12-51 (140)
143 2hy5_A Putative sulfurtransfer 24.2 1.4E+02 0.0048 26.2 6.2 41 243-284 1-43 (130)
144 1kyq_A Met8P, siroheme biosynt 24.0 1.2E+02 0.0041 30.8 6.4 33 242-281 13-45 (274)
145 3v5n_A Oxidoreductase; structu 24.0 89 0.003 32.7 5.6 54 595-654 79-139 (417)
146 3u7q_B Nitrogenase molybdenum- 23.9 1.5E+02 0.0051 32.7 7.6 80 234-320 356-447 (523)
147 3dty_A Oxidoreductase, GFO/IDH 23.7 96 0.0033 32.1 5.7 54 595-654 54-114 (398)
148 2q2v_A Beta-D-hydroxybutyrate 23.7 1.1E+02 0.0036 29.2 5.7 20 260-279 16-35 (255)
149 2pk3_A GDP-6-deoxy-D-LYXO-4-he 23.7 73 0.0025 30.8 4.6 76 233-320 3-83 (321)
150 2c20_A UDP-glucose 4-epimerase 23.6 1.6E+02 0.0054 28.6 7.0 64 255-320 8-76 (330)
151 2r6j_A Eugenol synthase 1; phe 23.5 1.2E+02 0.0042 29.4 6.2 59 260-319 23-87 (318)
152 3f67_A Putative dienelactone h 23.3 77 0.0026 28.4 4.4 36 243-280 32-67 (241)
153 3pfb_A Cinnamoyl esterase; alp 23.3 93 0.0032 28.3 5.0 39 243-281 46-84 (270)
154 2f62_A Nucleoside 2-deoxyribos 23.1 1.7E+02 0.0059 27.4 6.8 65 588-657 26-106 (161)
155 4e08_A DJ-1 beta; flavodoxin-l 23.1 2.5E+02 0.0085 25.7 7.9 70 241-319 4-75 (190)
156 3qiv_A Short-chain dehydrogena 22.9 94 0.0032 29.3 5.1 33 242-279 8-40 (253)
157 3hn2_A 2-dehydropantoate 2-red 22.9 1.3E+02 0.0045 30.0 6.4 67 242-319 2-77 (312)
158 1lss_A TRK system potassium up 22.8 1.7E+02 0.0057 24.5 6.2 68 243-319 5-77 (140)
159 2hun_A 336AA long hypothetical 22.8 2.6E+02 0.009 27.1 8.5 75 240-320 1-84 (336)
160 3pdi_B Nitrogenase MOFE cofact 22.8 73 0.0025 34.4 4.8 75 237-320 308-384 (458)
161 2vzf_A NADH-dependent FMN redu 22.7 1.1E+02 0.0039 28.3 5.5 40 243-282 3-44 (197)
162 3f6r_A Flavodoxin; FMN binding 22.6 1.2E+02 0.0041 26.4 5.4 37 243-281 2-39 (148)
163 3mcu_A Dipicolinate synthase, 22.4 54 0.0019 32.2 3.4 40 241-284 4-44 (207)
164 3uuw_A Putative oxidoreductase 22.4 83 0.0028 31.1 4.8 52 595-655 45-96 (308)
165 2bln_A Protein YFBG; transfera 22.3 1.4E+02 0.0047 30.6 6.5 56 262-317 13-81 (305)
166 3fvw_A Putative NAD(P)H-depend 22.2 73 0.0025 29.8 4.1 40 242-281 2-41 (192)
167 3auf_A Glycinamide ribonucleot 22.1 1.7E+02 0.0058 28.9 6.9 72 242-318 22-108 (229)
168 1qzu_A Hypothetical protein MD 21.9 38 0.0013 33.1 2.1 47 233-283 10-57 (206)
169 3kkj_A Amine oxidase, flavin-c 21.9 76 0.0026 27.6 3.9 29 243-278 3-31 (336)
170 3q9l_A Septum site-determining 21.8 1.7E+02 0.0058 27.4 6.6 40 243-282 2-41 (260)
171 1xgk_A Nitrogen metabolite rep 21.8 1.8E+02 0.0062 29.4 7.3 60 259-319 16-81 (352)
172 2q1s_A Putative nucleotide sug 21.6 2.2E+02 0.0074 28.6 7.8 65 255-320 39-108 (377)
173 3r3s_A Oxidoreductase; structu 21.6 1.2E+02 0.004 29.9 5.7 33 242-279 48-80 (294)
174 1rpn_A GDP-mannose 4,6-dehydra 21.6 2E+02 0.0067 28.0 7.2 73 242-320 14-95 (335)
175 4had_A Probable oxidoreductase 21.5 85 0.0029 31.5 4.7 53 594-654 61-115 (350)
176 2c5a_A GDP-mannose-3', 5'-epim 21.3 1.9E+02 0.0064 29.1 7.2 63 255-319 36-101 (379)
177 3ic5_A Putative saccharopine d 21.2 2.7E+02 0.0091 22.4 7.0 58 260-319 16-77 (118)
178 3ea0_A ATPase, para family; al 21.2 1.4E+02 0.0049 27.6 6.0 42 242-283 3-45 (245)
179 3av3_A Phosphoribosylglycinami 21.2 1.5E+02 0.0051 28.7 6.2 71 243-318 4-89 (212)
180 3q2i_A Dehydrogenase; rossmann 21.2 2.3E+02 0.0077 28.6 7.8 52 595-655 52-105 (354)
181 3cea_A MYO-inositol 2-dehydrog 21.0 2.5E+02 0.0087 27.9 8.0 52 595-654 47-100 (346)
182 1n7h_A GDP-D-mannose-4,6-dehyd 20.8 1.9E+02 0.0064 28.9 7.0 26 255-280 35-60 (381)
183 4egb_A DTDP-glucose 4,6-dehydr 20.8 1.4E+02 0.0049 29.2 6.1 66 255-320 31-107 (346)
184 1p3d_A UDP-N-acetylmuramate--a 20.8 1.5E+02 0.0051 31.6 6.6 69 243-321 19-87 (475)
185 3kvo_A Hydroxysteroid dehydrog 20.7 1.8E+02 0.0061 29.8 7.0 33 243-280 45-77 (346)
186 2fuk_A XC6422 protein; A/B hyd 20.6 1.3E+02 0.0044 26.6 5.3 39 242-280 36-77 (220)
187 3h7a_A Short chain dehydrogena 20.6 1.3E+02 0.0046 28.7 5.7 32 243-279 7-38 (252)
188 2ph1_A Nucleotide-binding prot 20.5 1.8E+02 0.0061 28.0 6.6 43 242-284 17-59 (262)
189 2g1u_A Hypothetical protein TM 20.4 2.9E+02 0.0097 24.3 7.5 69 242-319 19-92 (155)
190 2ywr_A Phosphoribosylglycinami 20.3 1.2E+02 0.0041 29.4 5.3 71 243-318 2-87 (216)
191 3trd_A Alpha/beta hydrolase; c 20.1 1.3E+02 0.0046 26.4 5.2 39 242-280 30-71 (208)
192 3c85_A Putative glutathione-re 20.0 1.5E+02 0.005 26.8 5.6 69 242-319 39-113 (183)
193 1mio_B Nitrogenase molybdenum 20.0 2E+02 0.0068 30.8 7.4 79 235-320 305-394 (458)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.97 E-value=1e-28 Score=249.30 Aligned_cols=292 Identities=17% Similarity=0.178 Sum_probs=203.4
Q ss_pred CCCeEEEEeCC---CCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhH-----------------HhcCCeEEEeC
Q 006050 241 WSRKFILIFHE---LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-----------------LARRKIKVLED 300 (663)
Q Consensus 241 ~~kKILLI~he---Ls~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~e-----------------L~~~gIkVl~~ 300 (663)
++|||++|+++ ...||++..+.+||++|.++||+|++++....+..... ....|++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 36899999998 56799999999999999999999999986544322110 03467877643
Q ss_pred CCC----------------ch---h--------h----hhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhh
Q 006050 301 RGE----------------PS---F--------K----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR 349 (663)
Q Consensus 301 ~~~----------------~s---f--------k----~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~ 349 (663)
... .. + + ...++|+||++....+ ++..++... .+.++++++|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~~~--~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIKKY--FKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHHHH--HCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hhHHHHhhc--cCCCEEEEeccccc
Confidence 220 00 0 0 1348999999875432 222233221 23457777776421
Q ss_pred -----hhH--------------HHHHHHHhcCCEEEEecHHHHHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhcccc
Q 006050 350 -----EYF--------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTC 410 (663)
Q Consensus 350 -----~yf--------------~r~k~vl~rvk~lIflSes~~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~ 410 (663)
.++ ...+..+..++.++++|+...+..... .++. ..++.+||+|++.+.+....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~---~~~~-~~~i~vi~ngvd~~~~~~~~~-- 231 (439)
T 3fro_A 158 SKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGF---FRNF-EGKITYVFNGIDCSFWNESYL-- 231 (439)
T ss_dssp CCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHH---HGGG-TTSEEECCCCCCTTTSCGGGS--
T ss_pred ccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhh---hhhc-CCceeecCCCCCchhcCcccc--
Confidence 111 223455678999999999876652211 1222 357899999998754322111
Q ss_pred CCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhHHhC--CCCChhhhhhccccc
Q 006050 411 SLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQE--PSMDDSKIRKSRNVG 487 (663)
Q Consensus 411 slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~-p~KGqdlLLeA~~~l~e~~--P~~~~~k~~~~~~~~ 487 (663)
.+.+ ...+..+|+++|++++ ++|+++|++. +.||++.|++|++.+.++. |+.
T Consensus 232 -------~~~~-----~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~------------ 286 (439)
T 3fro_A 232 -------TGSR-----DERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM------------ 286 (439)
T ss_dssp -------CSCH-----HHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGE------------
T ss_pred -------cchh-----hhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCe------------
Confidence 0011 2245678999999888 9999999999 9999999999999996533 221
Q ss_pred cccccccccccccccccccccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecc
Q 006050 488 RKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSD 567 (663)
Q Consensus 488 ~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr 567 (663)
T Consensus 287 -------------------------------------------------------------------------------- 286 (439)
T 3fro_A 287 -------------------------------------------------------------------------------- 286 (439)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHH
Q 006050 568 GKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEA 645 (663)
Q Consensus 568 ~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEA 645 (663)
-++++|. |+ ..| .+.++.++++++ +.+.|+|..+ ++..+|++||++|+||. .|+||++++||
T Consensus 287 ------~l~i~G~-g~----~~~-~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EA 350 (439)
T 3fro_A 287 ------RFIIIGK-GD----PEL-EGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEA 350 (439)
T ss_dssp ------EEEEECC-CC----HHH-HHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHH
T ss_pred ------EEEEEcC-CC----hhH-HHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHH
Confidence 0256675 32 223 455888999887 8889999554 79999999999999999 89999999999
Q ss_pred HHcCCCEEEeCCCCccC
Q 006050 646 MAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 646 MA~GlPVVatd~~~l~~ 662 (663)
||||+|||+|+++++.+
T Consensus 351 ma~G~Pvi~s~~~~~~e 367 (439)
T 3fro_A 351 MCLGAIPIASAVGGLRD 367 (439)
T ss_dssp HHTTCEEEEESSTHHHH
T ss_pred HHCCCCeEEcCCCCcce
Confidence 99999999999987653
No 2
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.96 E-value=1.9e-29 Score=257.32 Aligned_cols=319 Identities=16% Similarity=0.159 Sum_probs=209.9
Q ss_pred eccCCcchhhhccccccccccccCCccccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCCh
Q 006050 208 VGPFGLTEDRILEWSPEKRSGTCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLM 287 (663)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~c~~k~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~ 287 (663)
|++|-+.|..|=...|.-..++=-+-.+++.-|.++||+++.+.+..||++..+.+|+.+|.+.||+|++++....+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~ 85 (416)
T 2x6q_A 6 VKEFSSGKRKLEDYKSIIGEEEVSKIQEKAEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFF 85 (416)
T ss_dssp CC-----CCCGGGGHHHHHHHHHHHHHHHHHTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHH
T ss_pred ehhccccccchhccccccCchhHHHHHHhhhhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchh
Confidence 34444444443333333333333344556777888999999999989999999999999999999999988865433221
Q ss_pred hH---Hh--cCCeEEEeCCCC--chh----------hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehh--
Q 006050 288 PE---LA--RRKIKVLEDRGE--PSF----------KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-- 348 (663)
Q Consensus 288 ~e---L~--~~gIkVl~~~~~--~sf----------k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r-- 348 (663)
+. +. -.+++++..... ..+ ....++|+||+++.....+. ..... ..+++|++|...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~~-~~p~v~~~h~~~~~ 160 (416)
T 2x6q_A 86 NVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI----EFYEK-KSPWLWRCHIDLSS 160 (416)
T ss_dssp HHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGG----GGSCC-CSCEEEECCSCCSS
T ss_pred hhhcccceeecccccccccHHHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHH----HHHHh-cCCEEEEEccccCC
Confidence 11 10 122212111110 000 01247999999875332211 11111 256788877532
Q ss_pred --hhhHHHHHHHHhcCCEEEE-ecHHHHHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHh
Q 006050 349 --REYFDRAKLVLDRVKLLVF-LSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREK 425 (663)
Q Consensus 349 --~~yf~r~k~vl~rvk~lIf-lSes~~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ek 425 (663)
..++.....++.+++.+++ +|+...+ .+. ..+..+||+|++...+.. ..++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~~~s~~~~~---------~~~-~~~~~vi~ngvd~~~~~~---------~~~~~~----- 216 (416)
T 2x6q_A 161 PNREFWEFLRRFVEKYDRYIFHLPEYVQP---------ELD-RNKAVIMPPSIDPLSEKN---------VELKQT----- 216 (416)
T ss_dssp CCHHHHHHHHHHHTTSSEEEESSGGGSCT---------TSC-TTTEEECCCCBCTTSTTT---------SCCCHH-----
T ss_pred ccHHHHHHHHHHHHhCCEEEEechHHHHh---------hCC-ccceEEeCCCCChhhhcc---------cccChh-----
Confidence 1223333455677787764 4443211 222 146789999997532211 112221
Q ss_pred hHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccc
Q 006050 426 RNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLL 505 (663)
Q Consensus 426 r~~lr~~vR~elGL~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l 505 (663)
.+..+|+++|++++.++|+++|++.+.||++.|++|++.+.++.|+.
T Consensus 217 ---~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~------------------------------ 263 (416)
T 2x6q_A 217 ---EILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGV------------------------------ 263 (416)
T ss_dssp ---HHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTC------------------------------
T ss_pred ---hHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe------------------------------
Confidence 23567899999999999999999999999999999999998776652
Q ss_pred cccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCC
Q 006050 506 QMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKS 585 (663)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~ 585 (663)
-++++|. |+.
T Consensus 264 --------------------------------------------------------------------~l~i~G~-g~~- 273 (416)
T 2x6q_A 264 --------------------------------------------------------------------QLLLVGV-MAH- 273 (416)
T ss_dssp --------------------------------------------------------------------EEEEEEC-CCT-
T ss_pred --------------------------------------------------------------------EEEEEec-Ccc-
Confidence 0266776 321
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEcCCcc-----hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCc
Q 006050 586 NKVPYVKEILEFLSQHSNLSKAMLWTPATT-----RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLL 660 (663)
Q Consensus 586 n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~-----dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l 660 (663)
++. ..++.++.+++.+++.++|+|+|+.+ ++..+|++||++|+||. .|+||++++||||||+|||+|+.+++
T Consensus 274 ~~~-~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~ 350 (416)
T 2x6q_A 274 DDP-EGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGI 350 (416)
T ss_dssp TCH-HHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHH
T ss_pred cch-hHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCC
Confidence 112 23555888999999999999999664 89999999999999999 99999999999999999999998765
Q ss_pred c
Q 006050 661 S 661 (663)
Q Consensus 661 ~ 661 (663)
.
T Consensus 351 ~ 351 (416)
T 2x6q_A 351 K 351 (416)
T ss_dssp H
T ss_pred h
Confidence 4
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.96 E-value=3.5e-28 Score=242.62 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=205.5
Q ss_pred cCCCeEEEEeCCCC--CCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHH-hcCCeEEEeCCCCch-----------
Q 006050 240 VWSRKFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEPS----------- 305 (663)
Q Consensus 240 ~~~kKILLI~heLs--~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL-~~~gIkVl~~~~~~s----------- 305 (663)
|+++||++|++... .||++..+.+|+.+| .||+|.+++....+.....+ ...+++++.......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMA 79 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHH
Confidence 45789999999776 799999999999999 69999998865443221333 357888876443211
Q ss_pred -hhhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhh------hHHHHHHHHhcCCEEEEecHHHHHHHHH
Q 006050 306 -FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE------YFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (663)
Q Consensus 306 -fk~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~------yf~r~k~vl~rvk~lIflSes~~k~w~~ 378 (663)
+....++|+||++......++..+... .+.+++++++|..... +....+.++.+++.++++|+...+.+..
T Consensus 80 ~~~~~~~~Dvv~~~~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 157 (394)
T 3okp_A 80 EIIREREIDNVWFGAAAPLALMAGTAKQ--AGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS 157 (394)
T ss_dssp HHHHHTTCSEEEESSCTTGGGGHHHHHH--TTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCcchHHHHHHHHHh--cCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH
Confidence 113458999999864333333323322 2345678777753211 1112345678899999999988777544
Q ss_pred HhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCH
Q 006050 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQ 458 (663)
Q Consensus 379 ~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~KGq 458 (663)
.. + ...++.++|+|++.+.+ .+.. ...+..+|+++|++++.++|+++|++.+.||+
T Consensus 158 ~~---~--~~~~~~vi~ngv~~~~~--------------~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 158 AF---G--SHPTFEHLPSGVDVKRF--------------TPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp HH---C--SSSEEEECCCCBCTTTS--------------CCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCH
T ss_pred hc---C--CCCCeEEecCCcCHHHc--------------CCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCH
Confidence 32 2 23468899999876432 1100 11245689999999998999999999999999
Q ss_pred HHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCC
Q 006050 459 LLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLS 538 (663)
Q Consensus 459 dlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~ 538 (663)
+.+++|++.+.++.|+.
T Consensus 214 ~~li~a~~~l~~~~~~~--------------------------------------------------------------- 230 (394)
T 3okp_A 214 DSLIKAMPQVIAARPDA--------------------------------------------------------------- 230 (394)
T ss_dssp HHHHHHHHHHHHHSTTC---------------------------------------------------------------
T ss_pred HHHHHHHHHHHhhCCCe---------------------------------------------------------------
Confidence 99999999998876652
Q ss_pred CCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCc--ch
Q 006050 539 PSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TR 616 (663)
Q Consensus 539 ~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~--~d 616 (663)
-++++|. |+ + .+.++.++ .++.++|.|+|.. .+
T Consensus 231 -----------------------------------~l~i~G~-g~------~-~~~l~~~~--~~~~~~v~~~g~~~~~~ 265 (394)
T 3okp_A 231 -----------------------------------QLLIVGS-GR------Y-ESTLRRLA--TDVSQNVKFLGRLEYQD 265 (394)
T ss_dssp -----------------------------------EEEEECC-CT------T-HHHHHHHT--GGGGGGEEEEESCCHHH
T ss_pred -----------------------------------EEEEEcC-ch------H-HHHHHHHH--hcccCeEEEcCCCCHHH
Confidence 0256675 32 2 33366666 6788999999999 59
Q ss_pred HHHHHHHccEEEEcCCCCC-------CCCcHHHHHHHHcCCCEEEeCCCCccC
Q 006050 617 VASLYSAADVYVINSQGLG-------ETFGRVTIEAMAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 617 v~~lysaADV~V~pS~~~~-------E~FG~ViiEAMA~GlPVVatd~~~l~~ 662 (663)
+..+|++||++|+||. . |+||++++||||||+|||+++.+++.+
T Consensus 266 ~~~~~~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e 316 (394)
T 3okp_A 266 MINTLAAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPE 316 (394)
T ss_dssp HHHHHHHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGG
T ss_pred HHHHHHhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEeCCCChHH
Confidence 9999999999999998 7 999999999999999999999998764
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.96 E-value=2.8e-27 Score=241.75 Aligned_cols=292 Identities=17% Similarity=0.241 Sum_probs=198.8
Q ss_pred CCeEEEEeCCC---------CCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChh-HHhcCCeEEEeCCCC-------c
Q 006050 242 SRKFILIFHEL---------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP-ELARRKIKVLEDRGE-------P 304 (663)
Q Consensus 242 ~kKILLI~heL---------s~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~-eL~~~gIkVl~~~~~-------~ 304 (663)
+|||++|.+.. ..||++..+.+||++|.+.||+|++++......... +....+++++..... .
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~ 99 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKE 99 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGG
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchh
Confidence 57999999765 358999999999999999999999988654322111 112367777643210 0
Q ss_pred -------hh-----h----hhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhh---------------hHH
Q 006050 305 -------SF-----K----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---------------YFD 353 (663)
Q Consensus 305 -------sf-----k----~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~---------------yf~ 353 (663)
.+ + ...++|+||++.... .++..++... ...++++++|..... ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~~~~~~~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 176 (438)
T 3c48_A 100 ELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRDL--WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRI 176 (438)
T ss_dssp GGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHHH--HTCCEEEECSSCHHHHSCC----CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccH-HHHHHHHHHH--cCCCEEEEecCCcccccccccccCCcchHHHHH
Confidence 00 0 011499999986432 2222222221 133566766654211 001
Q ss_pred HHHHHHhcCCEEEEecHHHHHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHH
Q 006050 354 RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSV 433 (663)
Q Consensus 354 r~k~vl~rvk~lIflSes~~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~v 433 (663)
..+.++..++.++++|+...+.+... .++.. .++.+||+|++.+.+ .+... ..++.+
T Consensus 177 ~~~~~~~~~d~ii~~s~~~~~~~~~~---~g~~~-~k~~vi~ngvd~~~~--------------~~~~~-----~~~~~~ 233 (438)
T 3c48_A 177 CEQQLVDNADVLAVNTQEEMQDLMHH---YDADP-DRISVVSPGADVELY--------------SPGND-----RATERS 233 (438)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHHH---HCCCG-GGEEECCCCCCTTTS--------------CCC---------CHHH
T ss_pred HHHHHHhcCCEEEEcCHHHHHHHHHH---hCCCh-hheEEecCCcccccc--------------CCccc-----chhhhh
Confidence 12345678999999999887775432 34432 357899999976432 11100 012347
Q ss_pred HHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccc
Q 006050 434 RKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGL 513 (663)
Q Consensus 434 R~elGL~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~ 513 (663)
|+++|++++.++|+++|++.+.||++.|++|+..+.++.|..+ +
T Consensus 234 r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~---~--------------------------------- 277 (438)
T 3c48_A 234 RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN---L--------------------------------- 277 (438)
T ss_dssp HHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCS---E---------------------------------
T ss_pred HHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcc---e---------------------------------
Confidence 8899999999999999999999999999999999988766310 0
Q ss_pred cccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHH
Q 006050 514 SSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKE 593 (663)
Q Consensus 514 ~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~ 593 (663)
+ ++++|.... ..++ .+
T Consensus 278 -----------------------------------------------~-------------l~i~G~~~~---~g~~-~~ 293 (438)
T 3c48_A 278 -----------------------------------------------R-------------VIICGGPSG---PNAT-PD 293 (438)
T ss_dssp -----------------------------------------------E-------------EEEECCBC----------C
T ss_pred -----------------------------------------------E-------------EEEEeCCCC---CCcH-HH
Confidence 0 256665211 0123 33
Q ss_pred HHHHHHHhCCCCCcEEEcCCc--chHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 594 ILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 594 ~L~~l~~~~gLs~~V~~~G~~--~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
.++.++++++++++|.|+|+. +++..+|++||++|+||. .|+||++++||||||+|||+++.+++.
T Consensus 294 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~ 361 (438)
T 3c48_A 294 TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLP 361 (438)
T ss_dssp HHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHH
T ss_pred HHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChh
Confidence 478889999999999999999 589999999999999998 999999999999999999999998764
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.95 E-value=8.1e-27 Score=236.27 Aligned_cols=283 Identities=16% Similarity=0.165 Sum_probs=192.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC---------Cchh------
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG---------EPSF------ 306 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~---------~~sf------ 306 (663)
+.++..... -..||++..+.+||++|.++||+|++++......+ .....++.+..... ...+
T Consensus 15 ~~~~~~~~~-p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (394)
T 2jjm_A 15 KLKIGITCY-PSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSVFQYPPYDLALASKM 91 (394)
T ss_dssp CCEEEEECC-C--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHHHHHHHH
T ss_pred eeeeehhcC-CCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc--cccCCceEEEecccccccccccccccHHHHHHH
Confidence 345544433 24799999999999999999999998875332221 12234665543211 0000
Q ss_pred ---hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhh-------hhHHHHHHHHhcCCEEEEecHHHHHHH
Q 006050 307 ---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-------EYFDRAKLVLDRVKLLVFLSESQTKQW 376 (663)
Q Consensus 307 ---k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~-------~yf~r~k~vl~rvk~lIflSes~~k~w 376 (663)
....++|+||+++.....+...+.........++++++|.... .+....+.++.+++.++++|+...+.+
T Consensus 92 ~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 92 AEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp HHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred HHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 1235899999986543322221222221113567788876321 112223455778999999999887775
Q ss_pred HHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCCC
Q 006050 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456 (663)
Q Consensus 377 ~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~K 456 (663)
.... +. ..++.++|+|++.+.+ .+.. +..+|+++|++++.++|+++|++.+.|
T Consensus 172 ~~~~---~~--~~~~~vi~ngv~~~~~--------------~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~K 224 (394)
T 2jjm_A 172 HELV---KP--NKDIQTVYNFIDERVY--------------FKRD--------MTQLKKEYGISESEKILIHISNFRKVK 224 (394)
T ss_dssp HHHT---CC--SSCEEECCCCCCTTTC--------------CCCC--------CHHHHHHTTCC---CEEEEECCCCGGG
T ss_pred HHhh---CC--cccEEEecCCccHHhc--------------CCcc--------hHHHHHHcCCCCCCeEEEEeecccccc
Confidence 4321 21 3578999999875432 1110 124678899988889999999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCccccccc
Q 006050 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (663)
Q Consensus 457 GqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~ 536 (663)
|++.|++|++.+.++ ++.
T Consensus 225 g~~~li~a~~~l~~~-~~~------------------------------------------------------------- 242 (394)
T 2jjm_A 225 RVQDVVQAFAKIVTE-VDA------------------------------------------------------------- 242 (394)
T ss_dssp THHHHHHHHHHHHHS-SCC-------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHhh-CCC-------------------------------------------------------------
Confidence 999999999998654 221
Q ss_pred CCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCcch
Q 006050 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR 616 (663)
Q Consensus 537 ~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~d 616 (663)
-++++|. |+ + .+.++.++++++++++|.|+|..++
T Consensus 243 -------------------------------------~l~i~G~-g~------~-~~~l~~~~~~~~l~~~v~~~g~~~~ 277 (394)
T 2jjm_A 243 -------------------------------------KLLLVGD-GP------E-FCTILQLVKNLHIEDRVLFLGKQDN 277 (394)
T ss_dssp -------------------------------------EEEEECC-CT------T-HHHHHHHHHTTTCGGGBCCCBSCSC
T ss_pred -------------------------------------EEEEECC-ch------H-HHHHHHHHHHcCCCCeEEEeCchhh
Confidence 0256675 32 1 3448889999999999999999889
Q ss_pred HHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCccCC
Q 006050 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLSIM 663 (663)
Q Consensus 617 v~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~~~ 663 (663)
+..+|++||++|+||. .|+||++++||||||+|||+++.+++.++
T Consensus 278 ~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~ 322 (394)
T 2jjm_A 278 VAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEV 322 (394)
T ss_dssp THHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTT
T ss_pred HHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHH
Confidence 9999999999999999 99999999999999999999999987653
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.95 E-value=1.7e-27 Score=248.14 Aligned_cols=302 Identities=15% Similarity=0.121 Sum_probs=199.9
Q ss_pred CeEEEEeCCC----CCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHH----------------------hcCCeE
Q 006050 243 RKFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL----------------------ARRKIK 296 (663)
Q Consensus 243 kKILLI~heL----s~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL----------------------~~~gIk 296 (663)
|||++|+++. ..||++..+.+||++|.++||+|++++....+ ....+ ...|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPA-VKAAVTDPVKCFEFTDLLGEKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHH-HHHHCCSCEEEEEESCSSSCCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccccccceeEEEEEecCCeEEEEEEEecCce
Confidence 6899999987 46899999999999999999999999864321 11110 136787
Q ss_pred EEeCCC---------Cc-------------h---h--------h---hhcCccEEEECchhhHHHHHHHHHhCCCCCccE
Q 006050 297 VLEDRG---------EP-------------S---F--------K---TSMKADLVIAGSAVCATWIDQYITRFPAGGSQV 340 (663)
Q Consensus 297 Vl~~~~---------~~-------------s---f--------k---~~~k~DLVianSav~aswi~~yi~~~pa~~~~v 340 (663)
++.... .. . + + ...++|+||+++... .++..++........++
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~-~~~~~~~~~~~~~~~p~ 158 (485)
T 1rzu_A 80 LLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA-AMTPVYMRYAETPEIPS 158 (485)
T ss_dssp EEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH-TTHHHHHHHSSSCCCCE
T ss_pred EEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccch-hHHHHHHhhcccCCCCE
Confidence 763210 00 0 0 1 135799999987432 22233333321234567
Q ss_pred EEEEeehhh----------------hhH-----------HHHHHHHhcCCEEEEecHHHHHHHHHHhHhhcc-------c
Q 006050 341 VWWIMENRR----------------EYF-----------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKL-------K 386 (663)
Q Consensus 341 vwwi~E~r~----------------~yf-----------~r~k~vl~rvk~lIflSes~~k~w~~~~~~~~i-------~ 386 (663)
++++|.... .++ ...+..+..++.++++|+...+.+.+. ..++ .
T Consensus 159 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--~~g~~~~~~~~~ 236 (485)
T 1rzu_A 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA--EFGMGLEGVIGS 236 (485)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH--HHHTTCHHHHHT
T ss_pred EEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhcc--ccCcchHHHHHh
Confidence 788876310 000 123455678999999999877764321 0121 0
Q ss_pred CCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCC-CEEEEEEecCCCCCCHHHHHHHH
Q 006050 387 LRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQ-DMLVLSLSSINPGKGQLLLVESA 465 (663)
Q Consensus 387 l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~-~~lVl~VGri~p~KGqdlLLeA~ 465 (663)
...++.+||+|++.+.+..... ......+..+.+ +.+...+..+|+++|++++ +++|+++|++.+.||++.|++|+
T Consensus 237 ~~~~~~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 313 (485)
T 1rzu_A 237 RAHVLHGIVNGIDADVWNPATD--HLIHDNYSAANL-KNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAV 313 (485)
T ss_dssp TGGGEEECCCCBCTTTSCTTTC--TTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTH
T ss_pred hcCCceEEcCCCcccccCCccc--ccccccccccch-hhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHH
Confidence 1246889999998654321100 000001111111 1122345678999999875 78999999999999999999999
Q ss_pred HHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCccccc
Q 006050 466 QLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSI 545 (663)
Q Consensus 466 ~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~ 545 (663)
..+.+. +.
T Consensus 314 ~~l~~~--~~---------------------------------------------------------------------- 321 (485)
T 1rzu_A 314 DEIVSL--GG---------------------------------------------------------------------- 321 (485)
T ss_dssp HHHHHT--TC----------------------------------------------------------------------
T ss_pred HHHHhc--Cc----------------------------------------------------------------------
Confidence 998652 21
Q ss_pred CCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEE-EcCCcchH-HHHHHH
Q 006050 546 GNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTRV-ASLYSA 623 (663)
Q Consensus 546 ~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~-~~G~~~dv-~~lysa 623 (663)
-++++|. |+ .+| ++.++.++++++ ++|. |+|...+. ..+|++
T Consensus 322 ----------------------------~l~ivG~-g~----~~~-~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 322 ----------------------------RLVVLGA-GD----VAL-EGALLAAASRHH--GRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp ----------------------------EEEEEEC-BC----HHH-HHHHHHHHHHTT--TTEEEEESCCHHHHHHHHHH
T ss_pred ----------------------------eEEEEeC-Cc----hHH-HHHHHHHHHhCC--CcEEEecCCCHHHHHHHHhc
Confidence 0266776 32 123 455888888875 7887 89996655 799999
Q ss_pred ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 624 ADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 624 ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
||++|+||. .|+||++++||||||+|||+|+++++.
T Consensus 366 adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~ 401 (485)
T 1rzu_A 366 CDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLA 401 (485)
T ss_dssp CSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHH
T ss_pred CCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChh
Confidence 999999999 999999999999999999999998764
No 7
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.95 E-value=1.5e-27 Score=250.58 Aligned_cols=298 Identities=13% Similarity=0.114 Sum_probs=202.2
Q ss_pred CCeEEEEeCCC-------------CCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhH----Hh----cCCeEEEeC
Q 006050 242 SRKFILIFHEL-------------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE----LA----RRKIKVLED 300 (663)
Q Consensus 242 ~kKILLI~heL-------------s~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~e----L~----~~gIkVl~~ 300 (663)
+|||++|.+.. ..||+++.+.+||++|.+.||+|++++....+...+. +. ..|++++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 37999999753 5699999999999999999999999886543222121 22 368888643
Q ss_pred CCC----------c--------hhh---hh--cCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhhhH-----
Q 006050 301 RGE----------P--------SFK---TS--MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYF----- 352 (663)
Q Consensus 301 ~~~----------~--------sfk---~~--~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~yf----- 352 (663)
... . .+. .. .++|+||+++... .++...+.... +.++++++|......+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~~~~~~~~~--~~p~v~~~H~~~~~~~~~~~~ 163 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKNIK--GLPFTFTGHSLGAQKMEKLNV 163 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHHHH--CCCEEEECSSCHHHHHHTTCC
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcc-hHHHHHHHHhc--CCcEEEEccCcccccchhhcc
Confidence 211 0 011 11 4799999987532 23332232211 3356777776421100
Q ss_pred ------------------HHHHHHHhcCCEEEEecHHHHHHHHHHhHhhc-c---cCCCCcEEeecCcchhhhhhhcccc
Q 006050 353 ------------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEK-L---KLRSQPAVVPLSVNDELAFVAGFTC 410 (663)
Q Consensus 353 ------------------~r~k~vl~rvk~lIflSes~~k~w~~~~~~~~-i---~l~s~~~VVp~gVndela~vagi~~ 410 (663)
...+.++..++.++++|+...+.+.... ..+ + ....++.+||+|++.+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~g~~~~~~~~~ki~vi~ngvd~~~~~------ 236 (499)
T 2r60_A 164 NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHD-LYRGAVNVEDDDKFSVIPPGVNTRVFD------ 236 (499)
T ss_dssp CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSG-GGTTTCCTTCGGGEEECCCCBCTTTSS------
T ss_pred CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhh-cccccccccCCCCeEEECCCcChhhcC------
Confidence 1124456789999999998776532210 012 2 0124688999999764321
Q ss_pred CCCCCCCChhhHHHhhHHHHHHHHHHhC-----CCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhccc
Q 006050 411 SLNTPTSSPEKMREKRNLLRDSVRKEMG-----LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRN 485 (663)
Q Consensus 411 slntp~~s~ek~~ekr~~lr~~vR~elG-----L~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~ 485 (663)
+... ...+..+|+++| ++++.++|+++|++.+.||++.|++|+..+.++.|+.
T Consensus 237 --------~~~~----~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---------- 294 (499)
T 2r60_A 237 --------GEYG----DKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---------- 294 (499)
T ss_dssp --------SCCC----HHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC----------
T ss_pred --------ccch----hhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc----------
Confidence 1100 112356788899 8888999999999999999999999999986543321
Q ss_pred cccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEe
Q 006050 486 VGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSK 565 (663)
Q Consensus 486 ~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~ 565 (663)
.
T Consensus 295 --------------------------------------------------------------------------~----- 295 (499)
T 2r60_A 295 --------------------------------------------------------------------------N----- 295 (499)
T ss_dssp --------------------------------------------------------------------------E-----
T ss_pred --------------------------------------------------------------------------e-----
Confidence 0
Q ss_pred cccccccceEEEEeecCCC-C-------CChhHHHHHHHHHHHhCCCCCcEEEcCCc--chHHHHHHHc----cEEEEcC
Q 006050 566 SDGKQQQALKILIGSVGSK-S-------NKVPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAA----DVYVINS 631 (663)
Q Consensus 566 gr~~~~KdlklliG~~g~~-~-------n~~~y~k~~L~~l~~~~gLs~~V~~~G~~--~dv~~lysaA----DV~V~pS 631 (663)
.++++|..... . +..+| .+.++.+++++|++++|+|+|.. +++..+|++| |++|+||
T Consensus 296 --------~l~i~G~~~~~~~~y~~l~~~~~~y-~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS 366 (499)
T 2r60_A 296 --------LVLTLRGIENPFEDYSRAGQEEKEI-LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTS 366 (499)
T ss_dssp --------EEEEESSCSBTTTBCTTSCHHHHHH-HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECC
T ss_pred --------EEEEECCCCCcccccccccccchHH-HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECc
Confidence 12556652110 0 01123 34488899999999999999997 5899999999 9999999
Q ss_pred CCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 632 QGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 632 ~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
. .|+||++++||||||+|||+|+++++.
T Consensus 367 ~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 367 F--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp S--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred c--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 9 999999999999999999999998764
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.95 E-value=4.5e-27 Score=245.03 Aligned_cols=301 Identities=14% Similarity=0.105 Sum_probs=199.6
Q ss_pred CeEEEEeCCC----CCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhH------------------H---hcCCeEE
Q 006050 243 RKFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE------------------L---ARRKIKV 297 (663)
Q Consensus 243 kKILLI~heL----s~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~e------------------L---~~~gIkV 297 (663)
|||++|+++. ..||++..+.+||++|.+.||+|++++.... +..+. + ...|+++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 79 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFP-DIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGI 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCH-HHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCcc-ccccccccceeEEEecccCCcEEEEEEEECCcEE
Confidence 6899999987 4689999999999999999999999986432 11111 1 1257777
Q ss_pred EeCC-------C---Cc------------h---h--------hh---hcCccEEEECchhhHHHHHHHHHhCCCCCccEE
Q 006050 298 LEDR-------G---EP------------S---F--------KT---SMKADLVIAGSAVCATWIDQYITRFPAGGSQVV 341 (663)
Q Consensus 298 l~~~-------~---~~------------s---f--------k~---~~k~DLVianSav~aswi~~yi~~~pa~~~~vv 341 (663)
+... . .. . + +. ..++|+||+++...+ ++..++.. .....+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~-~~~~~~~~-~~~~~p~v 157 (485)
T 2qzs_A 80 YLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LAPAYLAA-RGRPAKSV 157 (485)
T ss_dssp EEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT-THHHHHHH-TTCSSEEE
T ss_pred EEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchh-HHHHHHhh-ccCCCCEE
Confidence 5321 0 00 0 0 11 158999999874332 22222321 12345677
Q ss_pred EEEeehhhh------------------------h---HHHHHHHHhcCCEEEEecHHHHHHHHHHhHhhcccC-------
Q 006050 342 WWIMENRRE------------------------Y---FDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKL------- 387 (663)
Q Consensus 342 wwi~E~r~~------------------------y---f~r~k~vl~rvk~lIflSes~~k~w~~~~~~~~i~l------- 387 (663)
+++|..... + ....+..+..++.++++|+...+..... ..++.+
T Consensus 158 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--~~~~~~~~~~~~~ 235 (485)
T 2qzs_A 158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP--QFAYGMEGLLQQR 235 (485)
T ss_dssp EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH--HHHTTCHHHHHHH
T ss_pred EEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc--ccCcchHHHHHhh
Confidence 888764200 0 0122455678999999999877664321 012211
Q ss_pred C--CCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCC--CCEEEEEEecCCCCCCHHHHHH
Q 006050 388 R--SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLLVE 463 (663)
Q Consensus 388 ~--s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~--~~~lVl~VGri~p~KGqdlLLe 463 (663)
. .++.+||+|++.+.+..... ......++.... +.+...+..+|+++|+++ +.++|+++|++.+.||++.|++
T Consensus 236 ~~~~~~~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~ 312 (485)
T 2qzs_A 236 HREGRLSGVLNGVDEKIWSPETD--LLLASRYTRDTL-EDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312 (485)
T ss_dssp HHTTCEEECCCCCCTTTSCTTTC--TTSSSCCCTTCG-GGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHH
T ss_pred ccCCceEEEecCCCccccCcccc--ccccccccccch-hHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHH
Confidence 1 46899999998654321110 000001111111 122334567899999986 7799999999999999999999
Q ss_pred HHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCccc
Q 006050 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (663)
Q Consensus 464 A~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~ 543 (663)
|++.+.+. +.
T Consensus 313 a~~~l~~~--~~-------------------------------------------------------------------- 322 (485)
T 2qzs_A 313 ALPGLLEQ--GG-------------------------------------------------------------------- 322 (485)
T ss_dssp HHHHHHHT--TC--------------------------------------------------------------------
T ss_pred HHHHHhhC--Cc--------------------------------------------------------------------
Confidence 99998652 21
Q ss_pred ccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEE-EcCCcchH-HHHH
Q 006050 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTRV-ASLY 621 (663)
Q Consensus 544 ~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~-~~G~~~dv-~~ly 621 (663)
-++++|. |+ .+| ++.++.++++++ ++|. |+|...+. ..+|
T Consensus 323 ------------------------------~l~ivG~-g~----~~~-~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 323 ------------------------------QLALLGA-GD----PVL-QEGFLAAAAEYP--GQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp ------------------------------EEEEEEE-EC----HHH-HHHHHHHHHHST--TTEEEEESCCHHHHHHHH
T ss_pred ------------------------------EEEEEeC-Cc----hHH-HHHHHHHHHhCC--CcEEEeCCCCHHHHHHHH
Confidence 0267776 32 123 455888888875 7885 99996654 8999
Q ss_pred HHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 622 saADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
++||++|+||. .|+||++++||||||+|||+|+++++.
T Consensus 365 ~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~ 402 (485)
T 2qzs_A 365 GGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLA 402 (485)
T ss_dssp HHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHH
T ss_pred HhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCcc
Confidence 99999999999 999999999999999999999998764
No 9
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.95 E-value=3.7e-27 Score=239.64 Aligned_cols=277 Identities=18% Similarity=0.193 Sum_probs=192.5
Q ss_pred CeEEEEeCCCC-CCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEE--------EeCCC--Cch------
Q 006050 243 RKFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKV--------LEDRG--EPS------ 305 (663)
Q Consensus 243 kKILLI~heLs-~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkV--------l~~~~--~~s------ 305 (663)
|||++|.+... .||+++.+.+||++|.++ |+|.+++....|... ...+.. +.... ...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV----HANIEEFDAQTAEHVRGLNEQGFYYSGLSE 75 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS----CSSSEEEEHHHHHHHTTCCSTTCCHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc----ccccccCCccccccccccccccchHHHHHH
Confidence 68999987665 578899999999999999 999999877654211 001111 00000 001
Q ss_pred hhhhcCccEEEECchhh--HHHHHHHHHhCCCCCccEEEEEeehhhhhHHHHHHHHhcCC--EEEEecHHHHHHHHHHhH
Q 006050 306 FKTSMKADLVIAGSAVC--ATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVK--LLVFLSESQTKQWLTWCE 381 (663)
Q Consensus 306 fk~~~k~DLVianSav~--aswi~~yi~~~pa~~~~vvwwi~E~r~~yf~r~k~vl~rvk--~lIflSes~~k~w~~~~~ 381 (663)
+....++|+||+++... +.++. .+...|.. ..++.+.+..........+.++.+++ .++++|+...+.+.
T Consensus 76 ~l~~~~~Div~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~~---- 149 (413)
T 3oy2_A 76 FIDVHKPDIVMIYNDPIVIGNYLL-AMGKCSHR-TKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDIC---- 149 (413)
T ss_dssp HHHHHCCSEEEEEECHHHHHHHHH-HGGGCCSC-CEEEEEECCCSBSCCGGGGGGGGCTTEEEEEESSTHHHHHHH----
T ss_pred HHHhcCCCEEEEcchHHHHHHHHH-HhccCCCC-CceeeeccccchhhHHHHHHHHhccCCceEEEcCHHHHHHHH----
Confidence 11345899999985322 11111 11233322 23333333221111111234567766 99999998877743
Q ss_pred hhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCC--CCEEEEEEecCCCCCCHH
Q 006050 382 EEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQL 459 (663)
Q Consensus 382 ~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~--~~~lVl~VGri~p~KGqd 459 (663)
+.++ ..++.++|+|++.+.+ ...|+++++++ +.++|+++|++.+.||++
T Consensus 150 ~~~~--~~~~~vi~ngvd~~~~---------------------------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~ 200 (413)
T 3oy2_A 150 NYGC--KVPINIVSHFVDTKTI---------------------------YDARKLVGLSEYNDDVLFLNMNRNTARKRLD 200 (413)
T ss_dssp HTTC--CSCEEECCCCCCCCCC---------------------------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHH
T ss_pred HcCC--CCceEEeCCCCCHHHH---------------------------HHHHHhcCCCcccCceEEEEcCCCchhcCcH
Confidence 3444 3578999999875421 12467889988 899999999999999999
Q ss_pred HHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCC
Q 006050 460 LLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSP 539 (663)
Q Consensus 460 lLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~ 539 (663)
.|++|+..+.++.|+. +
T Consensus 201 ~li~a~~~l~~~~~~~-----~---------------------------------------------------------- 217 (413)
T 3oy2_A 201 IYVLAAARFISKYPDA-----K---------------------------------------------------------- 217 (413)
T ss_dssp HHHHHHHHHHHHCTTC-----C----------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCc-----E----------------------------------------------------------
Confidence 9999999998877763 0
Q ss_pred CcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCc-------EEEcC
Q 006050 540 SLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKA-------MLWTP 612 (663)
Q Consensus 540 ~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~-------V~~~G 612 (663)
++++|.... .... .+++.++.+++++|++++ |.|+|
T Consensus 218 -----------------------------------l~ivG~g~~-~~~~-~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 218 -----------------------------------VRFLCNSHH-ESKF-DLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp -----------------------------------EEEEEECCT-TCSC-CHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred -----------------------------------EEEEeCCcc-cchh-hHHHHHHHHHHHcCcccccccccceeeccC
Confidence 267786332 1121 245668889999999997 88999
Q ss_pred Ccc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 613 ATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 613 ~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
..+ ++..+|++||++|+||. .|+||++++||||||+|||+|+++++.
T Consensus 261 ~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~ 309 (413)
T 3oy2_A 261 VLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGAD 309 (413)
T ss_dssp CCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHH
T ss_pred cCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChH
Confidence 977 89999999999999999 999999999999999999999998754
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.95 E-value=3.7e-27 Score=234.28 Aligned_cols=276 Identities=16% Similarity=0.223 Sum_probs=188.7
Q ss_pred CeEEEEeCC-CCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCc--h-------------h
Q 006050 243 RKFILIFHE-LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP--S-------------F 306 (663)
Q Consensus 243 kKILLI~he-Ls~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~--s-------------f 306 (663)
|||++|.+. ...||+++.+.+||++|.++||+|++++....+... .++++....... . +
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~l~~~ 75 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWVQNH 75 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC-----CCcEEEEEccCcccchhhHHHHHHHHHHH
Confidence 589999887 457899999999999999999999998865333322 367765433211 0 1
Q ss_pred hhhcCccEEEECchhhHH---------HHHHHHHhCCCCCccEEEEEeeh--h-hhhHHHHHHHHh--cCCEEEEecHHH
Q 006050 307 KTSMKADLVIAGSAVCAT---------WIDQYITRFPAGGSQVVWWIMEN--R-REYFDRAKLVLD--RVKLLVFLSESQ 372 (663)
Q Consensus 307 k~~~k~DLVianSav~as---------wi~~yi~~~pa~~~~vvwwi~E~--r-~~yf~r~k~vl~--rvk~lIflSes~ 372 (663)
....++|+||++....+. .+..+...+. |.... + ..+....+..+. .++.++++|+..
T Consensus 76 i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 147 (374)
T 2iw1_A 76 LKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKG--------FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQ 147 (374)
T ss_dssp HHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHCC--------HHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHH
T ss_pred HhccCCCEEEEecCCCCceeeeccccccceeeeeccc--------chhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHH
Confidence 123589999987531110 0000000000 00000 0 001111112222 588999999988
Q ss_pred HHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecC
Q 006050 373 TKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI 452 (663)
Q Consensus 373 ~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri 452 (663)
.+.+... .++.. .++.++|+|++.+.+.... . ...++.+|+++|++++.++|+++|++
T Consensus 148 ~~~~~~~---~~~~~-~~~~vi~ngv~~~~~~~~~----------~--------~~~~~~~~~~~~~~~~~~~i~~~G~~ 205 (374)
T 2iw1_A 148 IADFQKH---YQTEP-ERFQILPPGIYPDRKYSEQ----------I--------PNSREIYRQKNGIKEQQNLLLQVGSD 205 (374)
T ss_dssp HHHHHHH---HCCCG-GGEEECCCCCCGGGSGGGS----------C--------TTHHHHHHHHTTCCTTCEEEEEECSC
T ss_pred HHHHHHH---hCCCh-hheEEecCCcCHHhcCccc----------c--------hhHHHHHHHHhCCCCCCeEEEEeccc
Confidence 8775432 34432 3578999999876432211 0 11245688999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhHHh-CCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcc
Q 006050 453 NPGKGQLLLVESAQLMIEQ-EPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (663)
Q Consensus 453 ~p~KGqdlLLeA~~~l~e~-~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p 531 (663)
.+.||++.+++|+..+.++ .|+.
T Consensus 206 ~~~K~~~~li~a~~~l~~~~~~~~-------------------------------------------------------- 229 (374)
T 2iw1_A 206 FGRKGVDRSIEALASLPESLRHNT-------------------------------------------------------- 229 (374)
T ss_dssp TTTTTHHHHHHHHHTSCHHHHHTE--------------------------------------------------------
T ss_pred hhhcCHHHHHHHHHHhHhccCCce--------------------------------------------------------
Confidence 9999999999999987443 1220
Q ss_pred cccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEc
Q 006050 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (663)
Q Consensus 532 ~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~ 611 (663)
-++++|. |+ . +.++.++++++++++|+|+
T Consensus 230 ------------------------------------------~l~i~G~-g~---~-----~~~~~~~~~~~~~~~v~~~ 258 (374)
T 2iw1_A 230 ------------------------------------------LLFVVGQ-DK---P-----RKFEALAEKLGVRSNVHFF 258 (374)
T ss_dssp ------------------------------------------EEEEESS-SC---C-----HHHHHHHHHHTCGGGEEEE
T ss_pred ------------------------------------------EEEEEcC-CC---H-----HHHHHHHHHcCCCCcEEEC
Confidence 0256675 32 1 2367788888999999999
Q ss_pred CCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCccC
Q 006050 612 PATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 612 G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~~ 662 (663)
|+.+++..+|++||++|+||. .|+||++++||||||+|||+|+.+++.+
T Consensus 259 g~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e 307 (374)
T 2iw1_A 259 SGRNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAH 307 (374)
T ss_dssp SCCSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTH
T ss_pred CCcccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchh
Confidence 999999999999999999999 9999999999999999999999988653
No 11
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.93 E-value=1.3e-25 Score=223.30 Aligned_cols=251 Identities=16% Similarity=0.117 Sum_probs=176.4
Q ss_pred cCCCeEEEEeCC--------------CCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCch
Q 006050 240 VWSRKFILIFHE--------------LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS 305 (663)
Q Consensus 240 ~~~kKILLI~he--------------Ls~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~s 305 (663)
|.++||++|.+. ...||++..+.+|+++|.+.||+|++++..... .. ..+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-~~----~~~~~~~~~~~~~~ 75 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSP-AG----RPGLTVVPAGEPEE 75 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSC-CC----STTEEECSCCSHHH
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCC-CC----CCcceeccCCcHHH
Confidence 566899999998 246899999999999999999999988754322 21 35777765432212
Q ss_pred h---hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhhhHHHHHHHHhcCCEEEEecHHHHHHHHHHhHh
Q 006050 306 F---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (663)
Q Consensus 306 f---k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~yf~r~k~vl~rvk~lIflSes~~k~w~~~~~~ 382 (663)
+ ....++|+||+++.....+ ... ....+ ++++|.....+ ..++.++++|+...+.+..
T Consensus 76 l~~~l~~~~~Dvi~~~~~~~~~~-----~~~-~~~~p-v~~~h~~~~~~--------~~~d~ii~~S~~~~~~~~~---- 136 (342)
T 2iuy_A 76 IERWLRTADVDVVHDHSGGVIGP-----AGL-PPGTA-FISSHHFTTRP--------VNPVGCTYSSRAQRAHCGG---- 136 (342)
T ss_dssp HHHHHHHCCCSEEEECSSSSSCS-----TTC-CTTCE-EEEEECSSSBC--------SCCTTEEESCHHHHHHTTC----
T ss_pred HHHHHHhcCCCEEEECCchhhHH-----HHh-hcCCC-EEEecCCCCCc--------ccceEEEEcCHHHHHHHhc----
Confidence 1 2245899999987432211 111 22345 77888754322 1278899999987765321
Q ss_pred hcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHH
Q 006050 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLV 462 (663)
Q Consensus 383 ~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~KGqdlLL 462 (663)
..+..+||+|++.+.+. +.. . .. .++.+|+++|++.+.||++.|+
T Consensus 137 -----~~~~~vi~ngvd~~~~~--------------~~~-----~----------~~-~~~~~i~~vG~~~~~Kg~~~li 181 (342)
T 2iuy_A 137 -----GDDAPVIPIPVDPARYR--------------SAA-----D----------QV-AKEDFLLFMGRVSPHKGALEAA 181 (342)
T ss_dssp -----CTTSCBCCCCBCGGGSC--------------CST-----T----------CC-CCCSCEEEESCCCGGGTHHHHH
T ss_pred -----CCceEEEcCCCChhhcC--------------ccc-----c----------cC-CCCCEEEEEeccccccCHHHHH
Confidence 34688999999765321 000 0 11 2455799999999999999999
Q ss_pred HHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCcc
Q 006050 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (663)
Q Consensus 463 eA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f 542 (663)
+|++.+ +. +
T Consensus 182 ~a~~~~-----~~-----~------------------------------------------------------------- 190 (342)
T 2iuy_A 182 AFAHAC-----GR-----R------------------------------------------------------------- 190 (342)
T ss_dssp HHHHHH-----TC-----C-------------------------------------------------------------
T ss_pred HHHHhc-----Cc-----E-------------------------------------------------------------
Confidence 999886 21 0
Q ss_pred cccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCcc--hHHHH
Q 006050 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT--RVASL 620 (663)
Q Consensus 543 ~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~--dv~~l 620 (663)
++++|. |+ . ++.++++++.++ ++|+|+|..+ ++.++
T Consensus 191 --------------------------------l~i~G~-g~---~----~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 191 --------------------------------LVLAGP-AW---E----PEYFDEITRRYG--STVEPIGEVGGERRLDL 228 (342)
T ss_dssp --------------------------------EEEESC-CC---C----HHHHHHHHHHHT--TTEEECCCCCHHHHHHH
T ss_pred --------------------------------EEEEeC-cc---c----HHHHHHHHHHhC--CCEEEeccCCHHHHHHH
Confidence 256775 32 2 233556777666 7999999998 55999
Q ss_pred HHHccEEEEcCC--------CCCCCCcHHHHHHHHcCCCEEEeCCCCccC
Q 006050 621 YSAADVYVINSQ--------GLGETFGRVTIEAMAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 621 ysaADV~V~pS~--------~~~E~FG~ViiEAMA~GlPVVatd~~~l~~ 662 (663)
|++||++|+||. +..|+||++++||||||+|||+|+.+++.+
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e 278 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAE 278 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHH
T ss_pred HHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHH
Confidence 999999999996 136999999999999999999999988653
No 12
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.92 E-value=2.6e-24 Score=235.05 Aligned_cols=194 Identities=13% Similarity=0.144 Sum_probs=136.2
Q ss_pred HHHHhcCCEEEEecHHHHHHHHHHhHhhc-----ccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHH
Q 006050 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEK-----LKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLR 430 (663)
Q Consensus 356 k~vl~rvk~lIflSes~~k~w~~~~~~~~-----i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr 430 (663)
+..+..++.++++|+...+...+.. ..+ ..-..++.+|+||||.+.+..... ......++.....+.+...+
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d--~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKD--KYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTC--SSSSCCCCTTTHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCc--cccccccchhhhhhhhHHHH
Confidence 4456678999999998776643321 111 111346899999998765432211 11111222222234455667
Q ss_pred HHHHHHhCCC--CCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhcccccccccccccccccccccccccc
Q 006050 431 DSVRKEMGLT--DQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMS 508 (663)
Q Consensus 431 ~~vR~elGL~--~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~ 508 (663)
..+++++||+ ++.++|++|||+.++||+++|++|+..+.++.+.
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~---------------------------------- 358 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQ---------------------------------- 358 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCE----------------------------------
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCe----------------------------------
Confidence 8899999996 4568999999999999999999999998532211
Q ss_pred ccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCCh
Q 006050 509 DDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKV 588 (663)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~ 588 (663)
.+++|. |. .
T Consensus 359 ------------------------------------------------------------------l~l~G~-G~----~ 367 (536)
T 3vue_A 359 ------------------------------------------------------------------IVLLGT-GK----K 367 (536)
T ss_dssp ------------------------------------------------------------------EEEECC-BC----H
T ss_pred ------------------------------------------------------------------EEEEec-cC----c
Confidence 255665 32 1
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCccC
Q 006050 589 PYVKEILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 589 ~y~k~~L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~~ 662 (663)
+ .+..++.++..+ +++|.+.+..+ ++..+|++||+||+||+ .|+||++++||||||+|||+|+++++.+
T Consensus 368 ~-~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e 438 (536)
T 3vue_A 368 K-FEKLLKSMEEKY--PGKVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVD 438 (536)
T ss_dssp H-HHHHHHHHHHHS--TTTEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHH
T ss_pred h-HHHHHHHHHhhc--CCceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchh
Confidence 2 344466666654 56788887765 68899999999999999 9999999999999999999999998753
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.92 E-value=4.4e-24 Score=214.47 Aligned_cols=272 Identities=17% Similarity=0.154 Sum_probs=180.5
Q ss_pred CCeEEEEeCCCC--CCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHH-hcCCeEEEeCC--C-----Cc------h
Q 006050 242 SRKFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL-ARRKIKVLEDR--G-----EP------S 305 (663)
Q Consensus 242 ~kKILLI~heLs--~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL-~~~gIkVl~~~--~-----~~------s 305 (663)
+|||++|.+... .||++..+.+++++|.+.||+|.+++........++. ...+ +++... . .. .
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 98 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSVARLRFGPATHRK 98 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC------------CCHHHHHH
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEeccccCCcccccccHHHHHH
Confidence 589999998753 4889999999999999999999988865443311222 1112 221111 0 00 0
Q ss_pred h---hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhhh------HHHHHHHHhcCCEEEEecHHHHHHH
Q 006050 306 F---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREY------FDRAKLVLDRVKLLVFLSESQTKQW 376 (663)
Q Consensus 306 f---k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~y------f~r~k~vl~rvk~lIflSes~~k~w 376 (663)
+ ....++|+||++......+ ...+... ...++++++|...... ....+.++.+++.++++|+...+.+
T Consensus 99 l~~~l~~~~~Dii~~~~~~~~~~-~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 175 (406)
T 2gek_A 99 VKKWIAEGDFDVLHIHEPNAPSL-SMLALQA--AEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ 175 (406)
T ss_dssp HHHHHHHHCCSEEEEECCCSSSH-HHHHHHH--EESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCccchHH-HHHHHHh--cCCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 1 1234899999886433222 1112211 1345777777642111 0111245688999999999887775
Q ss_pred HHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecC-CCC
Q 006050 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI-NPG 455 (663)
Q Consensus 377 ~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri-~p~ 455 (663)
.+. +.. .++ ++|++++.+.+.... .+.+++++.++|+++|++ .+.
T Consensus 176 ~~~-----~~~-~~~-vi~~~v~~~~~~~~~---------------------------~~~~~~~~~~~i~~~G~~~~~~ 221 (406)
T 2gek_A 176 MEA-----LGS-DAV-EIPNGVDVASFADAP---------------------------LLDGYPREGRTVLFLGRYDEPR 221 (406)
T ss_dssp HHH-----HSS-CEE-ECCCCBCHHHHHTCC---------------------------CCTTCSCSSCEEEEESCTTSGG
T ss_pred HHh-----cCC-CcE-EecCCCChhhcCCCc---------------------------hhhhccCCCeEEEEEeeeCccc
Confidence 432 222 246 999999876432111 011233456799999999 999
Q ss_pred CCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccc
Q 006050 456 KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535 (663)
Q Consensus 456 KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~ 535 (663)
||++.+++|+..+.++.|+.
T Consensus 222 Kg~~~li~a~~~l~~~~~~~------------------------------------------------------------ 241 (406)
T 2gek_A 222 KGMAVLLAALPKLVARFPDV------------------------------------------------------------ 241 (406)
T ss_dssp GCHHHHHHHHHHHHTTSTTC------------------------------------------------------------
T ss_pred cCHHHHHHHHHHHHHHCCCe------------------------------------------------------------
Confidence 99999999999997665542
Q ss_pred cCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCcc
Q 006050 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT 615 (663)
Q Consensus 536 ~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~ 615 (663)
-++++|. ++ + +.++.+++.+ .++|.|+|+.+
T Consensus 242 --------------------------------------~l~i~G~-~~------~--~~l~~~~~~~--~~~v~~~g~~~ 272 (406)
T 2gek_A 242 --------------------------------------EILIVGR-GD------E--DELREQAGDL--AGHLRFLGQVD 272 (406)
T ss_dssp --------------------------------------EEEEESC-SC------H--HHHHHHTGGG--GGGEEECCSCC
T ss_pred --------------------------------------EEEEEcC-Cc------H--HHHHHHHHhc--cCcEEEEecCC
Confidence 0256665 32 2 3366666655 78999999997
Q ss_pred --hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 616 --RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 616 --dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
++..+|++||++|+||. ..|+||++++||||||+|||+++.+++.
T Consensus 273 ~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 319 (406)
T 2gek_A 273 DATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFR 319 (406)
T ss_dssp HHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHH
T ss_pred HHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHH
Confidence 56999999999999982 2899999999999999999999987654
No 14
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.90 E-value=2.4e-22 Score=211.74 Aligned_cols=269 Identities=12% Similarity=0.118 Sum_probs=168.8
Q ss_pred CCeEEEEeCCCCCC---CHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhc-CCeEE-------------EeCCCC-
Q 006050 242 SRKFILIFHELSMT---GAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKV-------------LEDRGE- 303 (663)
Q Consensus 242 ~kKILLI~heLs~g---GAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~-~gIkV-------------l~~~~~- 303 (663)
++||+++++.+..+ |+...+.+||++|.++||+|.+++...... .+...+ .+... +.....
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKDLQSFKSFKYVMPEEDKDFALQIVPFNDRY 124 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHHHGGGTTSEECCTTCCCCCSEEEEECSCCT
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHHHHhhhccceeeccCCccccceeeeccccc
Confidence 58999999999864 888889999999999999999998543211 111111 11111 111000
Q ss_pred chhhhhcCccEEEECchhhHHHHHHHH---Hh-CCCCCccEEEEEeehhhhhH------HHHHHHHhcCC--EEEEecHH
Q 006050 304 PSFKTSMKADLVIAGSAVCATWIDQYI---TR-FPAGGSQVVWWIMENRREYF------DRAKLVLDRVK--LLVFLSES 371 (663)
Q Consensus 304 ~sfk~~~k~DLVianSav~aswi~~yi---~~-~pa~~~~vvwwi~E~r~~yf------~r~k~vl~rvk--~lIflSes 371 (663)
.......++|+||+++...+.+..... .+ ......+.+|.++.....++ ...+..+.+.. .+|++|+.
T Consensus 125 ~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 204 (413)
T 2x0d_A 125 NRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSEL 204 (413)
T ss_dssp TCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHH
T ss_pred cccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHH
Confidence 000012469999998643332221111 11 11112244555554322211 11223334443 47888998
Q ss_pred HHHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEec
Q 006050 372 QTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSS 451 (663)
Q Consensus 372 ~~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGr 451 (663)
..+... +.++.. .+..++|+|++.+.+.. + ..+ .+++..|+++||
T Consensus 205 ~~~~l~----~~g~~~-~~~~~i~~g~d~~~~~~----------------------------~-~~~-~~~~~~il~~gr 249 (413)
T 2x0d_A 205 LKQYFN----NKGYNF-TDEYFFQPKINTTLKNY----------------------------I-NDK-RQKEKIILVYGR 249 (413)
T ss_dssp HHHHHH----HHTCCC-SEEEEECCCCCHHHHTT----------------------------T-TSC-CCCCSEEEEEEC
T ss_pred HHHHHH----HcCCCC-CceEEeCCCcCchhhcc----------------------------c-ccc-cCCCCEEEEEec
Confidence 777643 334432 35788999987553210 0 011 234567889999
Q ss_pred C-CCCCCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCc
Q 006050 452 I-NPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (663)
Q Consensus 452 i-~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (663)
+ .+.||+++||+|++.+.++.|+.++ +
T Consensus 250 ~~~~~Kg~~~li~A~~~l~~~~~~~~~--~-------------------------------------------------- 277 (413)
T 2x0d_A 250 PSVKRNAFTLIVEALKIFVQKYDRSNE--W-------------------------------------------------- 277 (413)
T ss_dssp TTCGGGCHHHHHHHHHHHHHHCTTGGG--C--------------------------------------------------
T ss_pred CchhccCHHHHHHHHHHHHHhCCCCCc--e--------------------------------------------------
Confidence 6 6899999999999999877664100 0
Q ss_pred ccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEE
Q 006050 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610 (663)
Q Consensus 531 p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~ 610 (663)
-++++|. |.. . .++++.++|+|
T Consensus 278 -------------------------------------------~l~ivG~-~~~--~------------~~l~~~~~v~f 299 (413)
T 2x0d_A 278 -------------------------------------------KIISVGE-KHK--D------------IALGKGIHLNS 299 (413)
T ss_dssp -------------------------------------------EEEEEES-CCC--C------------EEEETTEEEEE
T ss_pred -------------------------------------------EEEEEcC-Cch--h------------hhcCCcCcEEE
Confidence 0266775 321 1 23567789999
Q ss_pred cCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 611 TPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 611 ~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
+|..+ +++.+|++||+||+||. .|+||++++||||||+|||+++.+
T Consensus 300 ~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~~g 347 (413)
T 2x0d_A 300 LGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNKYE 347 (413)
T ss_dssp EESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEECBT
T ss_pred cCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeCCC
Confidence 99975 89999999999999998 999999999999999999997654
No 15
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.89 E-value=4.7e-23 Score=236.66 Aligned_cols=345 Identities=13% Similarity=0.164 Sum_probs=205.3
Q ss_pred ceeeccCCcchhhhccc---------cccccccccCCccccccccCCCeEEEEe-CCC----------CCCCHHHHHH--
Q 006050 205 GLLVGPFGLTEDRILEW---------SPEKRSGTCDRKGDFARFVWSRKFILIF-HEL----------SMTGAPLSMM-- 262 (663)
Q Consensus 205 ~~~~~~~~~~~~~~~~~---------~~~~~~~~c~~k~~~~~~~~~kKILLI~-heL----------s~gGAp~smm-- 262 (663)
|+--| +|.+-.|++|. +|. .|.=..=+++.-+..+|++|+ |.+ +.||...+++
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~ 311 (816)
T 3s28_A 237 GLERG-WGDNAERVLDMIRLLLDLLEAPD----PCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQ 311 (816)
T ss_dssp TBCBC-SCSBHHHHHHHHHHHHHHHHSCC----HHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHH
T ss_pred CCCCC-cCCcHHHHHHHHHHHHHHhcCCC----cccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHH
Confidence 44444 56666666653 222 233333455777778999884 553 3456677888
Q ss_pred ------HHHHHHHHCCCeEE----EEEEcCCCC----ChhHHhc----CCeEEEeCCCCc-------------------h
Q 006050 263 ------ELATELLSCGATVS----AVVLSKRGG----LMPELAR----RKIKVLEDRGEP-------------------S 305 (663)
Q Consensus 263 ------eLA~~L~s~G~~V~----vVvLs~~Gg----L~~eL~~----~gIkVl~~~~~~-------------------s 305 (663)
+||++|.++||+|+ ++|-.-.+. ..++... .|++|+..+... .
T Consensus 312 ~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~ 391 (816)
T 3s28_A 312 VRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLET 391 (816)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHH
Confidence 47777788999885 555332111 1122211 366765321100 0
Q ss_pred hh----------hhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhh---------------h-H----HHH
Q 006050 306 FK----------TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---------------Y-F----DRA 355 (663)
Q Consensus 306 fk----------~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~---------------y-f----~r~ 355 (663)
|. ...++|+||+|...+ .++...++.. .+.++++.+|..... | + ...
T Consensus 392 F~~~~l~~il~~~~~~PDVIHsH~~~s-glva~llar~--~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE 468 (816)
T 3s28_A 392 YTEDAAVELSKELNGKPDLIIGNYSDG-NLVASLLAHK--LGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTAD 468 (816)
T ss_dssp HHHHHHHHHHHHCSSCCSEEEEEHHHH-HHHHHHHHHH--HTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeEEEeCCchH-HHHHHHHHHH--cCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHH
Confidence 11 013799999996543 2333333321 133456666653211 0 0 001
Q ss_pred HHHHhcCCEEEEecHHHHHHHHH----HhHhhcc------------c-CCCCcEEeecCcchhhhhhhccccCCCCCCCC
Q 006050 356 KLVLDRVKLLVFLSESQTKQWLT----WCEEEKL------------K-LRSQPAVVPLSVNDELAFVAGFTCSLNTPTSS 418 (663)
Q Consensus 356 k~vl~rvk~lIflSes~~k~w~~----~~~~~~i------------~-l~s~~~VVp~gVndela~vagi~~slntp~~s 418 (663)
+.+++.++.+|++|+...+...+ +....+. . ..+++.|||+|++.+.+...... .....
T Consensus 469 ~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~----~~Rl~ 544 (816)
T 3s28_A 469 IFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE----KRRLT 544 (816)
T ss_dssp HHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCT----TTCCG
T ss_pred HHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchh----hhhhh
Confidence 23678899999999876653111 1111111 1 11278999999987654321100 00000
Q ss_pred hh-hHHHhhHHHHHHHHHHhCC--CCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccc
Q 006050 419 PE-KMREKRNLLRDSVRKEMGL--TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTS 495 (663)
Q Consensus 419 ~e-k~~ekr~~lr~~vR~elGL--~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~ 495 (663)
.. ...+.........++.+|+ +++.++|+++|++.+.||++.|++|+..+.+..|+.
T Consensus 545 ~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v-------------------- 604 (816)
T 3s28_A 545 KFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA-------------------- 604 (816)
T ss_dssp GGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC--------------------
T ss_pred hccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe--------------------
Confidence 00 0000000000123566787 778899999999999999999999999986544331
Q ss_pred cccccccccccccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceE
Q 006050 496 RHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALK 575 (663)
Q Consensus 496 ~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~Kdlk 575 (663)
-+
T Consensus 605 ------------------------------------------------------------------------------~L 606 (816)
T 3s28_A 605 ------------------------------------------------------------------------------NL 606 (816)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------EE
Confidence 02
Q ss_pred EEEeecCC-CCCC---hhHHHHHHHHHHHhCCCCCcEEEcCCcc------hHHHHHH-HccEEEEcCCCCCCCCcHHHHH
Q 006050 576 ILIGSVGS-KSNK---VPYVKEILEFLSQHSNLSKAMLWTPATT------RVASLYS-AADVYVINSQGLGETFGRVTIE 644 (663)
Q Consensus 576 lliG~~g~-~~n~---~~y~k~~L~~l~~~~gLs~~V~~~G~~~------dv~~lys-aADV~V~pS~~~~E~FG~ViiE 644 (663)
+++|.... .+.+ .++ .+.+..+++++++.++|.|+|+++ ++..+|+ +||+||+||. .|+||++++|
T Consensus 607 vIvG~g~~~~~~~~e~~~~-~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllE 683 (816)
T 3s28_A 607 VVVGGDRRKESKDNEEKAE-MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVE 683 (816)
T ss_dssp EEECCCTTSCCCCHHHHHH-HHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHH
T ss_pred EEEeCCCcccccchhhHHH-HHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHH
Confidence 66675321 1111 124 344888999999999999999654 5778888 6899999999 9999999999
Q ss_pred HHHcCCCEEEeCCCCccC
Q 006050 645 AMAFGVPMLEAQKKLLSI 662 (663)
Q Consensus 645 AMA~GlPVVatd~~~l~~ 662 (663)
|||||+|||+|+.+++.+
T Consensus 684 AMA~G~PVIasd~GG~~E 701 (816)
T 3s28_A 684 AMTCGLPTFATCKGGPAE 701 (816)
T ss_dssp HHHTTCCEEEESSBTHHH
T ss_pred HHHcCCCEEEeCCCChHH
Confidence 999999999999998653
No 16
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=3.8e-20 Score=184.66 Aligned_cols=254 Identities=16% Similarity=0.084 Sum_probs=167.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCc--------------h---
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP--------------S--- 305 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~--------------s--- 305 (663)
+||+++.. ..||....+++||++|.+.||+|.+++.. .+...+.+...|+++....... .
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTA-DRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN 83 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECT-TSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecC-CcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHH
Confidence 79999974 45688888999999999999999988743 2222234555688876432210 0
Q ss_pred -h------hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhhhhHHHHHHHHhcCCEEEEecHHHHHHHHH
Q 006050 306 -F------KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (663)
Q Consensus 306 -f------k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~~yf~r~k~vl~rvk~lIflSes~~k~w~~ 378 (663)
+ ....++|+||++..... +........ . +.+++++.|.....+. .+.+...++.+++.++..
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~~~-~-~~p~v~~~~~~~~~~~--~~~~~~~~d~v~~~~~~~------ 152 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWS-L-GIPVVLHEQNGIAGLT--NKWLAKIATKVMQAFPGA------ 152 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHH-T-TCCEEEEECSSSCCHH--HHHHTTTCSEEEESSTTS------
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHHHH-c-CCCEEEEecCCCCcHH--HHHHHHhCCEEEecChhh------
Confidence 0 01348999999864322 111122221 1 2345555554211111 123345678777765432
Q ss_pred HhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEE-EEecCCCCCC
Q 006050 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVL-SLSSINPGKG 457 (663)
Q Consensus 379 ~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl-~VGri~p~KG 457 (663)
++ +..++|++++.+.+.. . ..++++++++++.+++ +.|++.+.||
T Consensus 153 --------~~-~~~~i~n~v~~~~~~~--------------~-----------~~~~~~~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 153 --------FP-NAEVVGNPVRTDVLAL--------------P-----------LPQQRLAGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp --------SS-SCEECCCCCCHHHHTS--------------C-----------CHHHHHTTCCSSEEEEEECTTTCCHHH
T ss_pred --------cC-CceEeCCccchhhccc--------------c-----------hhhhhcccCCCCcEEEEEcCchHhHHH
Confidence 12 4679999987653210 0 0135678877776554 5569999999
Q ss_pred HHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccC
Q 006050 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (663)
Q Consensus 458 qdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~ 537 (663)
+++|++|+..+.+ +. +
T Consensus 199 ~~~li~a~~~l~~---~~-----~-------------------------------------------------------- 214 (364)
T 1f0k_A 199 NQTMPQVAAKLGD---SV-----T-------------------------------------------------------- 214 (364)
T ss_dssp HHHHHHHHHHHGG---GE-----E--------------------------------------------------------
T ss_pred HHHHHHHHHHhcC---Cc-----E--------------------------------------------------------
Confidence 9999999998732 10 0
Q ss_pred CCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCcchH
Q 006050 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (663)
Q Consensus 538 ~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~~dv 617 (663)
+.+++|. +. + +.+++++++++++ +|.|+|+.+++
T Consensus 215 ------------------------------------~l~i~G~-~~------~--~~l~~~~~~~~~~-~v~~~g~~~~~ 248 (364)
T 1f0k_A 215 ------------------------------------IWHQSGK-GS------Q--QSVEQAYAEAGQP-QHKVTEFIDDM 248 (364)
T ss_dssp ------------------------------------EEEECCT-TC------H--HHHHHHHHHTTCT-TSEEESCCSCH
T ss_pred ------------------------------------EEEEcCC-ch------H--HHHHHHHhhcCCC-ceEEecchhhH
Confidence 0133453 22 1 3377778888874 79999999999
Q ss_pred HHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCc
Q 006050 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLL 660 (663)
Q Consensus 618 ~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l 660 (663)
..+|++||++|+|| + |++++||||||+|||+++.+++
T Consensus 249 ~~~~~~ad~~v~~s---g---~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 249 AAAYAWADVVVCRS---G---ALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp HHHHHHCSEEEECC---C---HHHHHHHHHHTCCEEECCCCCT
T ss_pred HHHHHhCCEEEECC---c---hHHHHHHHHhCCCEEEeeCCCC
Confidence 99999999999999 2 9999999999999999999865
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.86 E-value=4.5e-22 Score=211.89 Aligned_cols=266 Identities=13% Similarity=0.108 Sum_probs=171.4
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHH--HHHCCCeEEEEEEcCC--CCChhHHhcCCeEEEeCCCCc--h---hhhhcCc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATE--LLSCGATVSAVVLSKR--GGLMPELARRKIKVLEDRGEP--S---FKTSMKA 312 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~--L~s~G~~V~vVvLs~~--GgL~~eL~~~gIkVl~~~~~~--s---fk~~~k~ 312 (663)
++||+++++.+..+|++..+++|+++ |.+.||+|++++.... +.+..++...+ .+....... . +-...++
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~ 283 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTALGHLATAKHIRHHGI 283 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTTCCHHHHHHHHHHTTC
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCCCCHHHHHHHHHhCCC
Confidence 57999999999989999999999999 7889999998875432 23445565566 554433211 1 1134689
Q ss_pred cEEEECchhhH-HHHHHHHHhCCCCCccEEEEEeehhhhhHHHHHHHHh--cCCEEEEecHHHHHHHHHHhHhhcccCCC
Q 006050 313 DLVIAGSAVCA-TWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLD--RVKLLVFLSESQTKQWLTWCEEEKLKLRS 389 (663)
Q Consensus 313 DLVianSav~a-swi~~yi~~~pa~~~~vvwwi~E~r~~yf~r~k~vl~--rvk~lIflSes~~k~w~~~~~~~~i~l~s 389 (663)
|+||.+..... ..+. .+...++ ..++.|+-+.... ... .+. .++.++++|+.... ...
T Consensus 284 Div~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~-~~~----~~~~~~~d~~i~~s~~~~~------------~~~ 344 (568)
T 2vsy_A 284 DLLFDLRGWGGGGRPE-VFALRPA-PVQVNWLAYPGTS-GAP----WMDYVLGDAFALPPALEPF------------YSE 344 (568)
T ss_dssp SEEEECSSCTTCSSCH-HHHTCCS-SEEEEESSSSSCC-CCT----TCCEEEECTTTSCTTTGGG------------CSS
T ss_pred CEEEECCCCCCcchHH-HHhcCCC-ceeEeeecCCccc-CCC----CceEEEECCCcCCcccccC------------Ccc
Confidence 99997432110 0011 1122221 1122222111000 000 000 12333344443211 124
Q ss_pred CcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhH
Q 006050 390 QPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMI 469 (663)
Q Consensus 390 ~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~KGqdlLLeA~~~l~ 469 (663)
++.+||+.+... + ..+...+ ...|+++|++++.+ |+++|++.+ ||++.|++|+..+.
T Consensus 345 ~i~~ipn~~~~~-------~---~~~~~~~-----------~~~r~~~~~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~ 401 (568)
T 2vsy_A 345 HVLRLQGAFQPS-------D---TSRVVAE-----------PPSRTQCGLPEQGV-VLCCFNNSY-KLNPQSMARMLAVL 401 (568)
T ss_dssp EEEECSSCSCCC-------C---TTCCCCC-----------CCCTGGGTCCTTSC-EEEECCCGG-GCCHHHHHHHHHHH
T ss_pred eeEcCCCcCCCC-------C---CCCCCCC-----------CCCccccCCCCCCE-EEEeCCccc-cCCHHHHHHHHHHH
Confidence 567888732210 0 0000001 12467889987765 559999999 99999999999998
Q ss_pred HhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCcccccCCcc
Q 006050 470 EQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTD 549 (663)
Q Consensus 470 e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~ 549 (663)
++.|+.
T Consensus 402 ~~~~~~-------------------------------------------------------------------------- 407 (568)
T 2vsy_A 402 REVPDS-------------------------------------------------------------------------- 407 (568)
T ss_dssp HHCTTC--------------------------------------------------------------------------
T ss_pred HhCCCc--------------------------------------------------------------------------
Confidence 877763
Q ss_pred ccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCC-CcEEEcCCcc--hHHHHHHHccE
Q 006050 550 AVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS-KAMLWTPATT--RVASLYSAADV 626 (663)
Q Consensus 550 ~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs-~~V~~~G~~~--dv~~lysaADV 626 (663)
.++++|..|+ + ++.++.+++++|+. ++|+|+|.++ ++..+|++|||
T Consensus 408 ------------------------~l~i~G~~g~------~-~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv 456 (568)
T 2vsy_A 408 ------------------------VLWLLSGPGE------A-DARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADL 456 (568)
T ss_dssp ------------------------EEEEECCSTT------H-HHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSE
T ss_pred ------------------------EEEEecCCHH------H-HHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCE
Confidence 0266774343 2 45588899999998 9999999997 89999999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHcCCCEEE-------eCCC
Q 006050 627 YVINSQGLGETFGRVTIEAMAFGVPMLE-------AQKK 658 (663)
Q Consensus 627 ~V~pS~~~~E~FG~ViiEAMA~GlPVVa-------td~~ 658 (663)
||+||. . +||++++||||||+|||+ |+++
T Consensus 457 ~v~ps~--~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 457 FLDTHP--Y-NAHTTASDALWTGCPVLTTPGETFAARVA 492 (568)
T ss_dssp EECCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHH
T ss_pred EeeCCC--C-CCcHHHHHHHhCCCCEEeccCCCchHHHH
Confidence 999998 7 999999999999999999 9988
No 18
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.78 E-value=1.7e-17 Score=166.73 Aligned_cols=280 Identities=14% Similarity=0.122 Sum_probs=164.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCC-eEEEEEEcCCCCChhH-HhcCCeEE-EeCCC----Cch----------
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGA-TVSAVVLSKRGGLMPE-LARRKIKV-LEDRG----EPS---------- 305 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~-~V~vVvLs~~GgL~~e-L~~~gIkV-l~~~~----~~s---------- 305 (663)
|||++++.+. ..-..+..|+++|.+.|+ +|.+++....+++..+ +...++.. ++... ...
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 5888886552 112346789999999994 8887664433333333 33345533 22111 000
Q ss_pred ---hhhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehhh-----hhHHH-HHHH-HhcCCEEEEecHHHHHH
Q 006050 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-----EYFDR-AKLV-LDRVKLLVFLSESQTKQ 375 (663)
Q Consensus 306 ---fk~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r~-----~yf~r-~k~v-l~rvk~lIflSes~~k~ 375 (663)
+....++|+||+++.....|...+.+.. . +.+++++.|.... .+... .+.+ ...++.++++|+...+.
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~-~-~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 155 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAFY-Q-RIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQN 155 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHHT-T-TCCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEESSHHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHHH-H-CCCEEEEecccccccccCCCchHhhHHHHHhhccEEEcCcHHHHHH
Confidence 1123589999997532222333233322 1 3345555553210 01111 1222 34589999999887765
Q ss_pred HHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhC-CCCC-CEEEEEEecCC
Q 006050 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG-LTDQ-DMLVLSLSSIN 453 (663)
Q Consensus 376 w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elG-L~~~-~~lVl~VGri~ 453 (663)
+ ...++.. .++.++|+++.+...+... .. ..+...+..+++++| ++++ ..+++++|++.
T Consensus 156 l----~~~g~~~-~~i~vi~n~~~d~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 216 (384)
T 1vgv_A 156 L----LRENVAD-SRIFITGNTVIDALLWVRD-------------QV-MSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (384)
T ss_dssp H----HHTTCCG-GGEEECCCHHHHHHHHHHH-------------HT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCBS
T ss_pred H----HHcCCCh-hhEEEeCChHHHHHHhhhh-------------cc-ccchhhhHHHHHhccccCCCCCEEEEEeCCcc
Confidence 4 3345542 3578899986554322110 00 000011235788888 8554 46788999998
Q ss_pred CC-CCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCccc
Q 006050 454 PG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPV 532 (663)
Q Consensus 454 p~-KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ 532 (663)
+. ||++.|++|+..+.++.|+.
T Consensus 217 ~~~kg~~~li~a~~~l~~~~~~~--------------------------------------------------------- 239 (384)
T 1vgv_A 217 SFGRGFEEICHALADIATTHQDI--------------------------------------------------------- 239 (384)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTTE---------------------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHhhCCCe---------------------------------------------------------
Confidence 76 99999999999997766542
Q ss_pred ccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcC
Q 006050 533 RKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTP 612 (663)
Q Consensus 533 ~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G 612 (663)
.+++. .|. +..+ ++.++.++.. .++|.|+|
T Consensus 240 ------------------------------------------~l~i~-~g~---~~~~-~~~l~~~~~~---~~~v~~~g 269 (384)
T 1vgv_A 240 ------------------------------------------QIVYP-VHL---NPNV-REPVNRILGH---VKNVILID 269 (384)
T ss_dssp ------------------------------------------EEEEE-CCB---CHHH-HHHHHHHHTT---CTTEEEEC
T ss_pred ------------------------------------------EEEEE-cCC---CHHH-HHHHHHHhhc---CCCEEEeC
Confidence 13321 121 1123 3445555432 36899966
Q ss_pred Cc--chHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC-CCc
Q 006050 613 AT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK-KLL 660 (663)
Q Consensus 613 ~~--~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~-~~l 660 (663)
.. .++..+|++||++|+|| |.+++||||||+|||+++. ++.
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~ 313 (384)
T 1vgv_A 270 PQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTER 313 (384)
T ss_dssp CCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSC
T ss_pred CCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCc
Confidence 54 58999999999999999 3348999999999999986 654
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.77 E-value=4.8e-18 Score=177.31 Aligned_cols=57 Identities=11% Similarity=0.139 Sum_probs=53.1
Q ss_pred HHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHH-------HcCCCEEEeCC
Q 006050 599 SQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAM-------AFGVPMLEAQK 657 (663)
Q Consensus 599 ~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAM-------A~GlPVVatd~ 657 (663)
++++++.++|.|+|..+ ++..+|++||++|+||. .|+||++++||| |||+|||+|++
T Consensus 258 ~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~ 323 (406)
T 2hy7_A 258 GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA 323 (406)
T ss_dssp CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG
T ss_pred HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh
Confidence 45578899999999986 89999999999999999 999999999999 99999999985
No 20
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.76 E-value=1e-17 Score=167.40 Aligned_cols=273 Identities=12% Similarity=0.108 Sum_probs=156.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-C-CeEEEEEEcCCCCChhHH-hcCCeEE-Ee--C--C-CCch-------
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSC-G-ATVSAVVLSKRGGLMPEL-ARRKIKV-LE--D--R-GEPS------- 305 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~-G-~~V~vVvLs~~GgL~~eL-~~~gIkV-l~--~--~-~~~s------- 305 (663)
++||++++.+.... ..+..++.+|.+. | ++|.+++.........++ ...++++ +. . . ....
T Consensus 8 ~mkIl~v~~~~~~~---~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T 3beo_A 8 RLKVMTIFGTRPEA---IKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGL 84 (375)
T ss_dssp CEEEEEEECSHHHH---HHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CceEEEEecCcHHH---HHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHHH
Confidence 47999998654322 2356788888876 4 777665532221122222 2234432 11 1 1 1110
Q ss_pred --h---hhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehh--hh---h-HHHHHHHH-hcCCEEEEecHHHH
Q 006050 306 --F---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--RE---Y-FDRAKLVL-DRVKLLVFLSESQT 373 (663)
Q Consensus 306 --f---k~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r--~~---y-f~r~k~vl-~rvk~lIflSes~~ 373 (663)
+ ....++|+||+++.....++....... . +.+++++.|..+ .. + ....+.++ ..++.++++|+...
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~-~-~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 162 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY-N-QIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSA 162 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH-T-TCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH-H-CCCEEEEecccccccccCCChhHhhhhHHhhhhheeeCCCHHHH
Confidence 1 123589999997642222222222221 1 233454444221 00 0 11112223 34899999999877
Q ss_pred HHHHHHhHhhcccCCCCcEEeecC-cchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecC
Q 006050 374 KQWLTWCEEEKLKLRSQPAVVPLS-VNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI 452 (663)
Q Consensus 374 k~w~~~~~~~~i~l~s~~~VVp~g-Vndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri 452 (663)
+.+. +.++.. .++.++|++ ++.. .+... + ... ..+++++ +++..+++++|++
T Consensus 163 ~~~~----~~g~~~-~~i~vi~n~~~d~~-~~~~~-------~-~~~-----------~~~~~~~--~~~~~vl~~~gr~ 215 (375)
T 3beo_A 163 TNLQ----KENKDE-SRIFITGNTAIDAL-KTTVK-------E-TYS-----------HPVLEKL--GNNRLVLMTAHRR 215 (375)
T ss_dssp HHHH----HTTCCG-GGEEECCCHHHHHH-HHHCC-------S-SCC-----------CHHHHTT--TTSEEEEEECCCG
T ss_pred HHHH----HcCCCc-ccEEEECChhHhhh-hhhhh-------h-hhh-----------HHHHHhc--cCCCeEEEEeccc
Confidence 6643 345432 357899998 4432 22110 0 000 1234444 4555677899999
Q ss_pred CCC-CCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcc
Q 006050 453 NPG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (663)
Q Consensus 453 ~p~-KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p 531 (663)
.+. ||++.|++|++.+.++.|+.
T Consensus 216 ~~~~K~~~~li~a~~~l~~~~~~~-------------------------------------------------------- 239 (375)
T 3beo_A 216 ENLGEPMRNMFRAIKRLVDKHEDV-------------------------------------------------------- 239 (375)
T ss_dssp GGTTHHHHHHHHHHHHHHHHCTTE--------------------------------------------------------
T ss_pred ccchhHHHHHHHHHHHHHhhCCCe--------------------------------------------------------
Confidence 875 99999999999997766542
Q ss_pred cccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCCcEEEc
Q 006050 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (663)
Q Consensus 532 ~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~ 611 (663)
.+++|. |+ ... .++.++.+.. ..++|+|+
T Consensus 240 -------------------------------------------~~i~~~-g~---~~~-~~~~~~~~~~---~~~~v~~~ 268 (375)
T 3beo_A 240 -------------------------------------------QVVYPV-HM---NPV-VRETANDILG---DYGRIHLI 268 (375)
T ss_dssp -------------------------------------------EEEEEC-CS---CHH-HHHHHHHHHT---TCTTEEEE
T ss_pred -------------------------------------------EEEEeC-CC---CHH-HHHHHHHHhh---ccCCEEEe
Confidence 244553 32 112 2333444432 23689997
Q ss_pred CCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC-CCc
Q 006050 612 PATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK-KLL 660 (663)
Q Consensus 612 G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~-~~l 660 (663)
|... ++..+|++||++|+|| |.+++||||||+|||+++. ++.
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~ 313 (375)
T 3beo_A 269 EPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTER 313 (375)
T ss_dssp CCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSC
T ss_pred CCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCC
Confidence 7654 8999999999999999 6789999999999999964 654
No 21
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.73 E-value=1.4e-17 Score=153.49 Aligned_cols=122 Identities=22% Similarity=0.334 Sum_probs=98.8
Q ss_pred HHHHHHHhCCCCCCEEEEEEecCC-CCCCHHHHHHHHHHhH--HhCCCCChhhhhhcccccccccccccccccccccccc
Q 006050 430 RDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMI--EQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQ 506 (663)
Q Consensus 430 r~~vR~elGL~~~~~lVl~VGri~-p~KGqdlLLeA~~~l~--e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~ 506 (663)
+..+|+++|++++ .+|+++|++. +.||++.+++|+..+. ++.|+.
T Consensus 24 ~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~------------------------------- 71 (200)
T 2bfw_A 24 KKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM------------------------------- 71 (200)
T ss_dssp HHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE-------------------------------
T ss_pred HHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe-------------------------------
Confidence 3568899999754 5899999999 9999999999999984 333221
Q ss_pred ccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCC
Q 006050 507 MSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSN 586 (663)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n 586 (663)
+ ++++|. ++
T Consensus 72 ------------------------------------------------------~-------------l~i~G~-~~--- 80 (200)
T 2bfw_A 72 ------------------------------------------------------R-------------FIIIGK-GD--- 80 (200)
T ss_dssp ------------------------------------------------------E-------------EEEECC-BC---
T ss_pred ------------------------------------------------------E-------------EEEECC-CC---
Confidence 0 256665 21
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEE-cCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 587 KVPYVKEILEFLSQHSNLSKAMLW-TPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 587 ~~~y~k~~L~~l~~~~gLs~~V~~-~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
.++ .+.++.+++.++ +|+| +|..+ ++..+|++||++|+||. .|+||++++||||||+|||+++.+++.
T Consensus 81 -~~~-~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 151 (200)
T 2bfw_A 81 -PEL-EGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 151 (200)
T ss_dssp -HHH-HHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred -hHH-HHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEEEeCCCChH
Confidence 123 344777888776 8999 99998 99999999999999999 899999999999999999999987653
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.71 E-value=3.2e-16 Score=170.00 Aligned_cols=234 Identities=13% Similarity=0.112 Sum_probs=145.3
Q ss_pred CccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehh--hhhHH---HHHHHH---hcCCEEEEecHHHHHHHHHHhHh
Q 006050 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--REYFD---RAKLVL---DRVKLLVFLSESQTKQWLTWCEE 382 (663)
Q Consensus 311 k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r--~~yf~---r~k~vl---~rvk~lIflSes~~k~w~~~~~~ 382 (663)
..|+|++|..-.. .+..+++.. ....+++|..|... .+.|. ..+.++ -.++.+.|.+....+.+...|..
T Consensus 123 ~~DiV~vHdyhl~-~l~~~lr~~-~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~ 200 (482)
T 1uqt_A 123 DDDIIWIHDYHLL-PFAHELRKR-GVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSN 200 (482)
T ss_dssp TTCEEEEESGGGT-THHHHHHHT-TCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHH-HHHHHHHHh-CCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHH
Confidence 5699999863211 122333322 12345777777531 11111 111222 34577888877666666555542
Q ss_pred h-c--------ccC---CCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEe
Q 006050 383 E-K--------LKL---RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLS 450 (663)
Q Consensus 383 ~-~--------i~l---~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VG 450 (663)
. + +.. ..++.++|+||+.+.+..... .| +. +. ++.+|++++ ++++|+++|
T Consensus 201 ~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~-----~~----~~-----~~-~~~lr~~~~---~~~vil~Vg 262 (482)
T 1uqt_A 201 LTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAA-----GP----LP-----PK-LAQLKAELK---NVQNIFSVE 262 (482)
T ss_dssp HSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHH-----SC----CC-----HH-HHHHHHHTT---TCEEEEEEC
T ss_pred HhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhc-----Cc----ch-----HH-HHHHHHHhC---CCEEEEEEe
Confidence 1 1 111 124678999998765432100 00 00 01 345788887 678999999
Q ss_pred cCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCc
Q 006050 451 SINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (663)
Q Consensus 451 ri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (663)
|+.+.||++.+|+||+.++++.|+. +
T Consensus 263 Rl~~~Kgi~~ll~A~~~ll~~~p~~-----~------------------------------------------------- 288 (482)
T 1uqt_A 263 RLDYSKGLPERFLAYEALLEKYPQH-----H------------------------------------------------- 288 (482)
T ss_dssp CBCGGGCHHHHHHHHHHHHHHCGGG-----T-------------------------------------------------
T ss_pred CCcccCCHHHHHHHHHHHHHhCccc-----c-------------------------------------------------
Confidence 9999999999999999999887763 0
Q ss_pred ccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhH--HHHHHHHHHHhCC----C
Q 006050 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPY--VKEILEFLSQHSN----L 604 (663)
Q Consensus 531 p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y--~k~~L~~l~~~~g----L 604 (663)
.++ .++++|. ++..+..+| +++.++.++.+.| .
T Consensus 289 ---------------------------~~v-------------~Lv~vG~-p~~~~~~~~~~l~~~l~~l~~~in~~~g~ 327 (482)
T 1uqt_A 289 ---------------------------GKI-------------RYTQIAP-TSRGDVQAYQDIRHQLENEAGRINGKYGQ 327 (482)
T ss_dssp ---------------------------TTE-------------EEEEECC-BCSTTSHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred ---------------------------CcE-------------EEEEEEC-CCccchHHHHHHHHHHHHHHHHHhhhccc
Confidence 000 1366675 222223333 3444666665532 2
Q ss_pred CC--cEE-EcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCC-----CEEEeCCCCcc
Q 006050 605 SK--AML-WTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-----PMLEAQKKLLS 661 (663)
Q Consensus 605 s~--~V~-~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~Gl-----PVVatd~~~l~ 661 (663)
.+ .|+ |.|..+ +++.+|++|||||+||. .|+||+|++||||||+ |||+|+.+|..
T Consensus 328 ~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~ 392 (482)
T 1uqt_A 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (482)
T ss_dssp TTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG
T ss_pred CCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCH
Confidence 21 365 567654 89999999999999999 9999999999999997 89999976643
No 23
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.71 E-value=1.2e-16 Score=165.61 Aligned_cols=254 Identities=11% Similarity=0.117 Sum_probs=158.2
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC-ChhHHhcCCeE--EEeCCCCch-----hhhhcCccEEEEC
Q 006050 247 LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPELARRKIK--VLEDRGEPS-----FKTSMKADLVIAG 318 (663)
Q Consensus 247 LI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg-L~~eL~~~gIk--Vl~~~~~~s-----fk~~~k~DLVian 318 (663)
+.+|..|. |..+++..|+++|.+.| +|.+.+.+..+. +..++. .++. +. ...+.. +-...++|+||..
T Consensus 43 iwih~~s~-G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p~~~~~~l~~~l~~~~pDiv~~~ 118 (374)
T 2xci_A 43 LWVHTASI-GEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKS-DFYDCLHP-LPLDNPFSVKRFEELSKPKALIVV 118 (374)
T ss_dssp EEEECSSH-HHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CCCSSHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEcCCH-HHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhc-ccccceeE-CCCCCHHHHHHHHHHhCCCEEEEE
Confidence 46788774 66789999999999999 887655433221 122222 3554 33 322221 2234579999864
Q ss_pred -chhhHHHHHHHHHhCCCCCccEEEEEeehhhhhHHHHHHHHhcCCEEEEecHHHHHHHHHHhHhhcccCCCCcEEeecC
Q 006050 319 -SAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLS 397 (663)
Q Consensus 319 -Sav~aswi~~yi~~~pa~~~~vvwwi~E~r~~yf~r~k~vl~rvk~lIflSes~~k~w~~~~~~~~i~l~s~~~VVp~g 397 (663)
+.. |.. ++..... +++.+........ ..+.++.+++.++++|+...+.+ .+.++. ++.++|++
T Consensus 119 ~~~~---~~~-~~~~~~~---p~~~~~~~~~~~~--~~~~~~~~~d~ii~~S~~~~~~l----~~~g~~---ki~vi~n~ 182 (374)
T 2xci_A 119 EREF---WPS-LIIFTKV---PKILVNAYAKGSL--IEKILSKKFDLIIMRTQEDVEKF----KTFGAK---RVFSCGNL 182 (374)
T ss_dssp SCCC---CHH-HHHHCCS---CEEEEEECCCCCH--HHHHHHTTCSEEEESCHHHHHHH----HTTTCC---SEEECCCG
T ss_pred CccC---cHH-HHHHHhC---CEEEEEeecCchH--HHHHHHHhCCEEEECCHHHHHHH----HHcCCC---eEEEcCCC
Confidence 222 221 1221111 3433322111111 22456788999999999887664 334553 57788875
Q ss_pred cchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCCh
Q 006050 398 VNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDD 477 (663)
Q Consensus 398 Vndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~ 477 (663)
.-+ .. .+ + . ++ + .++++++.|+ ..||++.|++|++.+.++.|+.
T Consensus 183 ~f~-----~~------~~---~-~-------------~~--l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~-- 226 (374)
T 2xci_A 183 KFI-----CQ------KG---K-G-------------IK--L--KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSL-- 226 (374)
T ss_dssp GGC-----CC------CC---S-C-------------CC--C--SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTC--
T ss_pred ccC-----CC------cC---h-h-------------hh--h--cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCc--
Confidence 211 00 00 0 0 00 1 1245666664 4689999999999997666552
Q ss_pred hhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCC
Q 006050 478 SKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGH 557 (663)
Q Consensus 478 ~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~ 557 (663)
T Consensus 227 -------------------------------------------------------------------------------- 226 (374)
T 2xci_A 227 -------------------------------------------------------------------------------- 226 (374)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCC--------CcEEEcCCcchHHHHHHHccEEEE
Q 006050 558 LRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS--------KAMLWTPATTRVASLYSAADVYVI 629 (663)
Q Consensus 558 ~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs--------~~V~~~G~~~dv~~lysaADV~V~ 629 (663)
.++++|. |+ +. .+.++++++++|+. +.|.+.|...+++.+|++||++++
T Consensus 227 ----------------~lvivG~-g~-----~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl 283 (374)
T 2xci_A 227 ----------------KLILVPR-HI-----EN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIV 283 (374)
T ss_dssp ----------------EEEEEES-SG-----GG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEE
T ss_pred ----------------EEEEECC-CH-----HH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEE
Confidence 1367774 33 11 22377788888887 579999999999999999999998
Q ss_pred cCCCCCCCCcHHHHHHHHcCCCEEEe-CCCCc
Q 006050 630 NSQGLGETFGRVTIEAMAFGVPMLEA-QKKLL 660 (663)
Q Consensus 630 pS~~~~E~FG~ViiEAMA~GlPVVat-d~~~l 660 (663)
||. +.|++|++++||||||+|||++ ++++.
T Consensus 284 ~ss-~~e~gg~~~lEAmA~G~PVI~~~~~~~~ 314 (374)
T 2xci_A 284 GGT-FVNIGGHNLLEPTCWGIPVIYGPYTHKV 314 (374)
T ss_dssp CSS-SSSSCCCCCHHHHTTTCCEEECSCCTTS
T ss_pred CCc-ccCCCCcCHHHHHHhCCCEEECCCccCh
Confidence 874 2578999999999999999975 65654
No 24
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.66 E-value=2e-16 Score=142.01 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=56.4
Q ss_pred HHHHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCC-CEEE-eCCCCccC
Q 006050 593 EILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-PMLE-AQKKLLSI 662 (663)
Q Consensus 593 ~~L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~Gl-PVVa-td~~~l~~ 662 (663)
+.++.+++++++ +|.| |+.+ ++..+|++||++|+||. .|+||++++||||||+ |||+ ++.+++.+
T Consensus 45 ~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~ 113 (166)
T 3qhp_A 45 KKIKLLAQKLGV--KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQ 113 (166)
T ss_dssp HHHHHHHHHHTC--EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGG
T ss_pred HHHHHHHHHcCC--eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhh
Confidence 447778888887 8999 9975 89999999999999999 9999999999999998 9999 55666543
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.65 E-value=1.5e-16 Score=146.67 Aligned_cols=65 Identities=22% Similarity=0.316 Sum_probs=58.2
Q ss_pred HHHHHH--hCCCCCcEEEcCCcch--HHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 595 LEFLSQ--HSNLSKAMLWTPATTR--VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 595 L~~l~~--~~gLs~~V~~~G~~~d--v~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
++.+++ .++++++|.|+|..++ +..+|++||++|+||. .|+||++++||||||+|||+++.+++.
T Consensus 65 l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~ 133 (177)
T 2f9f_A 65 AERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFK 133 (177)
T ss_dssp HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHH
T ss_pred HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHH
Confidence 455666 6789999999999985 9999999999999999 999999999999999999999987643
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.65 E-value=1.2e-15 Score=153.60 Aligned_cols=269 Identities=14% Similarity=0.073 Sum_probs=151.7
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEEcCCCCC-hhHHhcCCeEE-EeCCC-----Cc---------h
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGL-MPELARRKIKV-LEDRG-----EP---------S 305 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~-G~~V~vVvLs~~GgL-~~eL~~~gIkV-l~~~~-----~~---------s 305 (663)
+||++++.+.+.. ..+..|+++|.+. ||+|.+++....... .+.+...++.. ++... .. .
T Consensus 6 mkIl~v~~~~~~~---~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 6 KRVVLAFGTRPEA---TKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQ 82 (376)
T ss_dssp EEEEEEECSHHHH---HHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEEEEeccHHH---HHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHH
Confidence 6899998654322 2356789999988 799877653221111 12334455543 22111 00 0
Q ss_pred ---hhhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehh-hh----hHH-H-HHHHHhcCCEEEEecHHHHHH
Q 006050 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-RE----YFD-R-AKLVLDRVKLLVFLSESQTKQ 375 (663)
Q Consensus 306 ---fk~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r-~~----yf~-r-~k~vl~rvk~lIflSes~~k~ 375 (663)
+....++|+||++......|.....+.. . +.+++++.+... .. +.. . ...+...++.+++.|+...+.
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~-~-~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 160 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFAVAWAAFL-E-GIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKAN 160 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHHHHHHHHH-T-TCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCChHHHHHHHHHHHH-h-CCCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCHHHHHH
Confidence 1124589999996432222322222221 1 223433221111 00 001 1 122334578888888876655
Q ss_pred HHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhCCCCCCEEEEEEecCCCC
Q 006050 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPG 455 (663)
Q Consensus 376 w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elGL~~~~~lVl~VGri~p~ 455 (663)
+ .+.++. +.++.++++++.|...+... +..+|+++ .++..+++++||+...
T Consensus 161 l----~~~g~~-~~ki~vi~n~~~d~~~~~~~----------------------~~~~~~~~--~~~~~vl~~~gr~~~~ 211 (376)
T 1v4v_A 161 L----LKEGKR-EEGILVTGQTGVDAVLLAAK----------------------LGRLPEGL--PEGPYVTVTMHRRENW 211 (376)
T ss_dssp H----HTTTCC-GGGEEECCCHHHHHHHHHHH----------------------HCCCCTTC--CSSCEEEECCCCGGGG
T ss_pred H----HHcCCC-cceEEEECCchHHHHhhhhh----------------------hhHHHHhc--CCCCEEEEEeCcccch
Confidence 3 334554 23567788765443221100 01122333 3456677889999888
Q ss_pred CCHHHHHHHHHHhHHhCCCCChhhhhhccccccccccccccccccccccccccccccccccccccccccccccCcccccc
Q 006050 456 KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKN 535 (663)
Q Consensus 456 KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~ 535 (663)
||++.|++|++.+.++.|+.
T Consensus 212 k~~~~ll~a~~~l~~~~~~~------------------------------------------------------------ 231 (376)
T 1v4v_A 212 PLLSDLAQALKRVAEAFPHL------------------------------------------------------------ 231 (376)
T ss_dssp GGHHHHHHHHHHHHHHCTTS------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCe------------------------------------------------------------
Confidence 99999999999997766552
Q ss_pred cCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEE-eecCCCCCChhHHHHHHHHHHHhCCCCCcEEEcCCc
Q 006050 536 LLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILI-GSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT 614 (663)
Q Consensus 536 ~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~Kdlklli-G~~g~~~n~~~y~k~~L~~l~~~~gLs~~V~~~G~~ 614 (663)
..+++ |. + .+ .++.++.+++. .++|+|+|..
T Consensus 232 --------------------------------------~lv~~~g~-~-----~~-~~~~l~~~~~~---~~~v~~~g~~ 263 (376)
T 1v4v_A 232 --------------------------------------TFVYPVHL-N-----PV-VREAVFPVLKG---VRNFVLLDPL 263 (376)
T ss_dssp --------------------------------------EEEEECCS-C-----HH-HHHHHHHHHTT---CTTEEEECCC
T ss_pred --------------------------------------EEEEECCC-C-----HH-HHHHHHHHhcc---CCCEEEECCC
Confidence 01332 32 1 11 24446666542 3689999543
Q ss_pred c--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC-CCCc
Q 006050 615 T--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ-KKLL 660 (663)
Q Consensus 615 ~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd-~~~l 660 (663)
. ++..+|++||++|+|| | |. ++||||||+|||+++ +++.
T Consensus 264 g~~~~~~~~~~ad~~v~~S----~--g~-~lEA~a~G~PvI~~~~~~~~ 305 (376)
T 1v4v_A 264 EYGSMAALMRASLLLVTDS----G--GL-QEEGAALGVPVVVLRNVTER 305 (376)
T ss_dssp CHHHHHHHHHTEEEEEESC----H--HH-HHHHHHTTCCEEECSSSCSC
T ss_pred CHHHHHHHHHhCcEEEECC----c--CH-HHHHHHcCCCEEeccCCCcc
Confidence 2 8999999999999999 2 33 789999999999974 5543
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.60 E-value=4.2e-15 Score=162.94 Aligned_cols=181 Identities=11% Similarity=0.097 Sum_probs=128.3
Q ss_pred HhcCCEEEEecHHHHHHHHHHhHhh--cccCC------------CCcEEeecCcchhhhhhhccccCCCCCCCChhhHHH
Q 006050 359 LDRVKLLVFLSESQTKQWLTWCEEE--KLKLR------------SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMRE 424 (663)
Q Consensus 359 l~rvk~lIflSes~~k~w~~~~~~~--~i~l~------------s~~~VVp~gVndela~vagi~~slntp~~s~ek~~e 424 (663)
+-.++.+.|-+..-...+...|... +.... .++.++|+||+.+.+.... . +
T Consensus 205 ll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~----------~-----~ 269 (496)
T 3t5t_A 205 MLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRN----------P-----Q 269 (496)
T ss_dssp HTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC--------------C-----C
T ss_pred HHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhh----------H-----H
Confidence 3468999999998888888878753 32211 1356788888765432110 0 0
Q ss_pred hhHHHHHHHHHHhCCCCCCEEEEEEecCCCCCCHHHHHHHHHHhHHhCCCCChhhhhhcccccccccccccccccccccc
Q 006050 425 KRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGL 504 (663)
Q Consensus 425 kr~~lr~~vR~elGL~~~~~lVl~VGri~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~ 504 (663)
.++.+|+++| +..+|++|||+++.||++.+|+|| .++++.|+.. ++
T Consensus 270 ----~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~--~v------------------------ 315 (496)
T 3t5t_A 270 ----LPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLE--KT------------------------ 315 (496)
T ss_dssp ----CCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCT--TE------------------------
T ss_pred ----HHHHHHHHhC---CceEEEEcccCccccCHHHHHHHH-HHHHhCcccc--eE------------------------
Confidence 0134677777 588999999999999999999999 9999888740 00
Q ss_pred ccccccccccccccccccccccccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCC
Q 006050 505 LQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSK 584 (663)
Q Consensus 505 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~ 584 (663)
.+++||. ++.
T Consensus 316 ---------------------------------------------------------------------~Lv~Vg~-psr 325 (496)
T 3t5t_A 316 ---------------------------------------------------------------------RMLVRMN-PNR 325 (496)
T ss_dssp ---------------------------------------------------------------------EEEEEEE-CCC
T ss_pred ---------------------------------------------------------------------EEEEEEC-CCC
Confidence 1355664 222
Q ss_pred CCChhH--HHHHHHHHHHhCC----CCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcC---CCEE
Q 006050 585 SNKVPY--VKEILEFLSQHSN----LSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFG---VPML 653 (663)
Q Consensus 585 ~n~~~y--~k~~L~~l~~~~g----Ls~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~G---lPVV 653 (663)
.+..+| +++.++.++.+.| .. .|+|+|..+ ++..+|++|||+|+||. .||||+|.+|||||| .|+|
T Consensus 326 ~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lV 402 (496)
T 3t5t_A 326 LYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVI 402 (496)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEE
T ss_pred CCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEE
Confidence 223333 2444666766543 32 799999865 89999999999999999 999999999999996 8999
Q ss_pred EeCCCCcc
Q 006050 654 EAQKKLLS 661 (663)
Q Consensus 654 atd~~~l~ 661 (663)
.|+..|.+
T Consensus 403 lSe~aGa~ 410 (496)
T 3t5t_A 403 LSETCGAA 410 (496)
T ss_dssp EETTBTTH
T ss_pred EeCCCCCH
Confidence 99887643
No 28
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.59 E-value=3.8e-14 Score=160.64 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=53.7
Q ss_pred HHHHHHhCCCCCc------EEEc-CCcc--------hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCC
Q 006050 595 LEFLSQHSNLSKA------MLWT-PATT--------RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKL 659 (663)
Q Consensus 595 L~~l~~~~gLs~~------V~~~-G~~~--------dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~ 659 (663)
+...+++++|.+. |.|. ++.+ ++.++|++||+||+||. .|+||++++||||||+|||+|+++|
T Consensus 475 Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 475 ILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 4445566777766 4555 4443 58999999999999999 9999999999999999999999998
Q ss_pred cc
Q 006050 660 LS 661 (663)
Q Consensus 660 l~ 661 (663)
+.
T Consensus 553 ~~ 554 (725)
T 3nb0_A 553 FG 554 (725)
T ss_dssp HH
T ss_pred hh
Confidence 63
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.30 E-value=5.2e-10 Score=117.17 Aligned_cols=283 Identities=17% Similarity=0.148 Sum_probs=153.0
Q ss_pred cccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEEcCCCC--ChhHHhcCCeE---EEeC--CC-Cch---
Q 006050 238 RFVWSRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGG--LMPELARRKIK---VLED--RG-EPS--- 305 (663)
Q Consensus 238 ~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~-G~~V~vVvLs~~Gg--L~~eL~~~gIk---Vl~~--~~-~~s--- 305 (663)
.-|.++||++|+-+-+ | -..+..|.++|.++ |+++.+++ +...- +.+.+...+|+ -+.. .+ ...
T Consensus 21 ~~~~m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~-tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~ 96 (396)
T 3dzc_A 21 QSNAMKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCV-TGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVT 96 (396)
T ss_dssp ---CCEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEE-CCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHH
T ss_pred HhCCCCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEE-ecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHH
Confidence 3356679999854432 1 13456788899887 78876555 21111 11224456663 1111 11 110
Q ss_pred ---------hhhhcCccEEEECchhhHHHHHHHHHhCCCCCccEEEEEeehh--h---hhHHHH-HHH-HhcCCEEEEec
Q 006050 306 ---------FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--R---EYFDRA-KLV-LDRVKLLVFLS 369 (663)
Q Consensus 306 ---------fk~~~k~DLVianSav~aswi~~yi~~~pa~~~~vvwwi~E~r--~---~yf~r~-k~v-l~rvk~lIflS 369 (663)
+-...+||+||.+......|.....+. ..+. +++......+ . .+.... +.+ ...++.+++.+
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~-~~~I-Pv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~s 174 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAY-YQQI-PVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPT 174 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHH-TTTC-CEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESS
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHH-HhCC-CEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCC
Confidence 112468999998643222222222222 1222 2432211000 0 010111 122 23457777777
Q ss_pred HHHHHHHHHHhHhhcccCCCCcEEeecCcchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHhC-CCCCCEEE-E
Q 006050 370 ESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG-LTDQDMLV-L 447 (663)
Q Consensus 370 es~~k~w~~~~~~~~i~l~s~~~VVp~gVndela~vagi~~slntp~~s~ek~~ekr~~lr~~vR~elG-L~~~~~lV-l 447 (663)
+...+. ...+|++. .++.++++.+.|.+.+.. ... +....+++.+|+++| ++.++.++ +
T Consensus 175 e~~~~~----l~~~G~~~-~ki~vvGn~~~d~~~~~~-------------~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv 235 (396)
T 3dzc_A 175 DTSRAN----LLQENYNA-ENIFVTGNTVIDALLAVR-------------EKI-HTDMDLQATLESQFPMLDASKKLILV 235 (396)
T ss_dssp HHHHHH----HHHTTCCG-GGEEECCCHHHHHHHHHH-------------HHH-HHCHHHHHHHHHTCTTCCTTSEEEEE
T ss_pred HHHHHH----HHHcCCCc-CcEEEECCcHHHHHHHhh-------------hhc-ccchhhHHHHHHHhCccCCCCCEEEE
Confidence 766555 34467642 356777775544432211 000 000112467889999 55555544 4
Q ss_pred EEec-CCCCCCHHHHHHHHHHhHHhCCCCChhhhhhcccccccccccccccccccccccccccccccccccccccccccc
Q 006050 448 SLSS-INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFT 526 (663)
Q Consensus 448 ~VGr-i~p~KGqdlLLeA~~~l~e~~P~~~~~k~~~~~~~~~~~~~~~~~h~lr~~~~l~~~~~~~~~~~~~~~~~~~~~ 526 (663)
+.+| -+.+|++..+++|+..+.++.|+. +
T Consensus 236 ~~hR~~~~~~~~~~ll~A~~~l~~~~~~~-----~--------------------------------------------- 265 (396)
T 3dzc_A 236 TGHRRESFGGGFERICQALITTAEQHPEC-----Q--------------------------------------------- 265 (396)
T ss_dssp ECSCBCCCTTHHHHHHHHHHHHHHHCTTE-----E---------------------------------------------
T ss_pred EECCcccchhHHHHHHHHHHHHHHhCCCc-----e---------------------------------------------
Confidence 5545 355688999999999998776652 0
Q ss_pred ccCcccccccCCCCcccccCCccccccCCCCCcceEEEecccccccceEEEEeecCCCCCChhHHHHHHHHHHHhCCCCC
Q 006050 527 QLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSK 606 (663)
Q Consensus 527 ~~~~p~~k~~~~~~~f~~~~~~~~~~~~~~~~r~kvl~~gr~~~~KdlklliG~~g~~~n~~~y~k~~L~~l~~~~gLs~ 606 (663)
.++.. |. + +..++.++.+ .+..+
T Consensus 266 ------------------------------------------------~v~~~--g~---~-~~~~~~l~~~---~~~~~ 288 (396)
T 3dzc_A 266 ------------------------------------------------ILYPV--HL---N-PNVREPVNKL---LKGVS 288 (396)
T ss_dssp ------------------------------------------------EEEEC--CB---C-HHHHHHHHHH---TTTCT
T ss_pred ------------------------------------------------EEEEe--CC---C-hHHHHHHHHH---HcCCC
Confidence 12221 21 1 2234445443 34457
Q ss_pred cEEEcCCc--chHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe-CCCC
Q 006050 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA-QKKL 659 (663)
Q Consensus 607 ~V~~~G~~--~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat-d~~~ 659 (663)
+|+++++. .++..+|++||++|.+| + | +++||||+|+|||++ +.++
T Consensus 289 ~v~~~~~lg~~~~~~l~~~ad~vv~~S---G---g-~~~EA~a~G~PvV~~~~~~~ 337 (396)
T 3dzc_A 289 NIVLIEPQQYLPFVYLMDRAHIILTDS---G---G-IQEEAPSLGKPVLVMRETTE 337 (396)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESC---S---G-GGTTGGGGTCCEEECCSSCS
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC---c---c-HHHHHHHcCCCEEEccCCCc
Confidence 89998887 48999999999999999 2 4 348999999999998 5554
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.25 E-value=5.4e-10 Score=113.54 Aligned_cols=49 Identities=20% Similarity=0.216 Sum_probs=42.9
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
.++++|.++|+. ++..+|++||++|.+|- +.+++||||+|+|||++...
T Consensus 289 ~~~~~v~~~~~~-~~~~~l~~ad~~v~~~g------~~t~~Ea~a~G~P~v~~p~~ 337 (412)
T 3otg_A 289 EVPANVRLESWV-PQAALLPHVDLVVHHGG------SGTTLGALGAGVPQLSFPWA 337 (412)
T ss_dssp CCCTTEEEESCC-CHHHHGGGCSEEEESCC------HHHHHHHHHHTCCEEECCCS
T ss_pred cCCCcEEEeCCC-CHHHHHhcCcEEEECCc------hHHHHHHHHhCCCEEecCCc
Confidence 367899999999 79999999999998873 37899999999999997654
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.07 E-value=1e-08 Score=106.01 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=43.0
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
+....+..+ .++.+.|+.++++++|++||++|.-+ + +.++.||||+|+|+|.....
T Consensus 226 ~~~~~~~~~--~~~~v~~f~~dm~~~l~~aDlvI~ra---G---~~Tv~E~~a~G~P~Ilip~p 281 (365)
T 3s2u_A 226 TAERYRTVA--VEADVAPFISDMAAAYAWADLVICRA---G---ALTVSELTAAGLPAFLVPLP 281 (365)
T ss_dssp HHHHHHHTT--CCCEEESCCSCHHHHHHHCSEEEECC---C---HHHHHHHHHHTCCEEECC--
T ss_pred ccceecccc--cccccccchhhhhhhhccceEEEecC---C---cchHHHHHHhCCCeEEeccC
Confidence 334444444 46778899999999999999999655 1 68889999999999976543
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.05 E-value=6.2e-09 Score=109.64 Aligned_cols=58 Identities=17% Similarity=0.164 Sum_probs=45.3
Q ss_pred HHHHHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe-CCCC
Q 006050 592 KEILEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA-QKKL 659 (663)
Q Consensus 592 k~~L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat-d~~~ 659 (663)
++.++.+. +..++|+++++.. ++..+|++||++|.+| |-+++|||++|+|||++ +.+.
T Consensus 271 ~~~l~~~~---~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------Gg~~~EA~a~g~PvV~~~~~~~ 331 (403)
T 3ot5_A 271 REKAMAIL---GGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLRDTTE 331 (403)
T ss_dssp HHHHHHHH---TTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------HHHHHHGGGTTCCEEECCSSCS
T ss_pred HHHHHHHh---CCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------ccHHHHHHHhCCCEEEecCCCc
Confidence 44444432 3446899999986 9999999999999988 34558999999999998 5543
No 33
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.93 E-value=1.9e-08 Score=102.77 Aligned_cols=48 Identities=21% Similarity=0.262 Sum_probs=40.8
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
.++++|+++|+. +...+|+.||++|..+ -+.+++|||++|+|+|+...
T Consensus 281 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~g------G~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 281 PLPEGVLAAGQF-PLSAIMPACDVVVHHG------GHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp -CCTTEEEESCC-CHHHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCC
T ss_pred cCCCcEEEeCcC-CHHHHHhhCCEEEecC------CHHHHHHHHHhCCCEEecCC
Confidence 367899999998 5899999999999765 26789999999999999643
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.82 E-value=2.8e-07 Score=94.85 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=42.3
Q ss_pred CCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 604 Ls~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
++++|+++|+.++. .+|++||++|..+- +++++|||++|+|+|++...
T Consensus 281 ~~~~v~~~~~~~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 281 LPDNVEVHDWVPQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp CCTTEEEESSCCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCS
T ss_pred CCCCeEEEecCCHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCc
Confidence 57899999999988 89999999998772 37899999999999998753
No 35
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.78 E-value=7.2e-08 Score=97.76 Aligned_cols=48 Identities=10% Similarity=0.230 Sum_probs=39.3
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+++++|++.|+.+ ...++++||++|..+- +.+++|||++|+|+|+...
T Consensus 267 ~~~~~v~~~~~~~-~~~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 267 DLPDNARIAESVP-LNLFLRTCELVICAGG------SGTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp TCCTTEEECCSCC-GGGTGGGCSEEEECCC------HHHHHHHHHTTCCEEECCC
T ss_pred cCCCCEEEeccCC-HHHHHhhCCEEEeCCC------HHHHHHHHHhCCCEEecCC
Confidence 4678999999975 4567799999997662 4689999999999999643
No 36
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.76 E-value=1.6e-07 Score=96.00 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=40.4
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
+++++|.+.|+. ++..+|+.||++|..+- +.+++|||++|+|+|+.
T Consensus 280 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~~G------~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 280 TLPRNVRAVGWT-PLHTLLRTCTAVVHHGG------GGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp SCCTTEEEESSC-CHHHHHTTCSEEEECCC------HHHHHHHHHHTCCEEEC
T ss_pred cCCCcEEEEccC-CHHHHHhhCCEEEECCC------HHHHHHHHHhCCCEEEc
Confidence 467899999999 89999999999997652 46899999999999994
No 37
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.67 E-value=1.3e-06 Score=90.90 Aligned_cols=57 Identities=7% Similarity=-0.076 Sum_probs=46.3
Q ss_pred CCCcEEEcCCcc--hHHHHHHHccEEEEcCCC-----CCCCCcHHHHHHHHcCCCEEEeCCCCcc
Q 006050 604 LSKAMLWTPATT--RVASLYSAADVYVINSQG-----LGETFGRVTIEAMAFGVPMLEAQKKLLS 661 (663)
Q Consensus 604 Ls~~V~~~G~~~--dv~~lysaADV~V~pS~~-----~~E~FG~ViiEAMA~GlPVVatd~~~l~ 661 (663)
++ +|+|+|..+ +++.+|+.+|+.++...+ +..++|..++||||||+|||+++.+.+.
T Consensus 213 l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~ 276 (339)
T 3rhz_A 213 PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQ 276 (339)
T ss_dssp CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTT
T ss_pred cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHH
Confidence 55 899999987 899999988887776221 1135689999999999999999988765
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.64 E-value=1.3e-06 Score=88.05 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=40.3
Q ss_pred CCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC
Q 006050 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ 656 (663)
Q Consensus 604 Ls~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd 656 (663)
++++|++.|+.++. .+|++||++|..+- ..+++|||++|+|+|+..
T Consensus 279 ~~~~v~~~~~~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 279 LPPNVEAHQWIPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp CCTTEEEESCCCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECG
T ss_pred CCCcEEEecCCCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeC
Confidence 67899999999988 99999999998883 357899999999999753
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.52 E-value=8.6e-07 Score=93.33 Aligned_cols=46 Identities=24% Similarity=0.323 Sum_probs=38.9
Q ss_pred CCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 605 SKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 605 s~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
.++|++++... ++..+|++||+++.+| |.++.|||++|+|||....
T Consensus 262 ~~~v~l~~~lg~~~~~~l~~~adlvvt~S-------Ggv~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 262 GDKIRFLPAFSFTDYVKLQMNAFCILSDS-------GTITEEASILNLPALNIRE 309 (385)
T ss_dssp GGGEEECCCCCHHHHHHHHHHCSEEEECC-------TTHHHHHHHTTCCEEECSS
T ss_pred CCCEEEEcCCCHHHHHHHHHhCcEEEECC-------ccHHHHHHHcCCCEEEcCC
Confidence 36899988765 8999999999999888 3368999999999998754
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.40 E-value=1.3e-05 Score=81.22 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=39.2
Q ss_pred CCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 604 Ls~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++++|.+ |+.+ ..++|++||++|..+- +.+++|||++|+|+|+...
T Consensus 262 ~~~~v~~-~~~~-~~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 307 (384)
T 2p6p_A 262 EVPQARV-GWTP-LDVVAPTCDLLVHHAG------GVSTLTGLSAGVPQLLIPK 307 (384)
T ss_dssp HCTTSEE-ECCC-HHHHGGGCSEEEECSC------TTHHHHHHHTTCCEEECCC
T ss_pred CCCceEE-cCCC-HHHHHhhCCEEEeCCc------HHHHHHHHHhCCCEEEccC
Confidence 4678999 9885 6889999999999762 3589999999999999865
No 41
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.38 E-value=8.7e-05 Score=75.78 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=40.5
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ 656 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd 656 (663)
.++++|++.++.++. .+|+.||++|..+- ..+++|||++|+|+|+..
T Consensus 294 ~~~~~v~~~~~~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p 340 (415)
T 3rsc_A 294 DLPPNVEAHRWVPHV-KVLEQATVCVTHGG------MGTLMEALYWGRPLVVVP 340 (415)
T ss_dssp CCCTTEEEESCCCHH-HHHHHEEEEEESCC------HHHHHHHHHTTCCEEECC
T ss_pred CCCCcEEEEecCCHH-HHHhhCCEEEECCc------HHHHHHHHHhCCCEEEeC
Confidence 467899999999987 99999999998872 357899999999999853
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.38 E-value=6e-07 Score=101.33 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=48.2
Q ss_pred HhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 600 QHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 600 ~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
...|++++|.|+|..+ +....|+.|||++-|+. . +.|.+++|||+||+|||+....
T Consensus 493 ~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y-~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 493 IKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFP--F-GNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSS--S-CCSHHHHHHHHTTCCEEEECCS
T ss_pred HHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--c-cCChHHHHHHHcCCCEEeccCC
Confidence 3467888999999987 67799999999999995 4 5599999999999999997644
No 43
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.99 E-value=0.0005 Score=71.28 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=40.3
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+++++|.+.++.+. ..++..||++|..+- . .++.|||++|+|+|+...
T Consensus 265 ~~~~~v~~~~~~~~-~~ll~~~d~~v~~gG-----~-~t~~Eal~~GvP~v~~p~ 312 (404)
T 3h4t_A 265 DEGDDCLVVGEVNH-QVLFGRVAAVVHHGG-----A-GTTTAVTRAGAPQVVVPQ 312 (404)
T ss_dssp SCCTTEEEESSCCH-HHHGGGSSEEEECCC-----H-HHHHHHHHHTCCEEECCC
T ss_pred cCCCCEEEecCCCH-HHHHhhCcEEEECCc-----H-HHHHHHHHcCCCEEEcCC
Confidence 35789999999876 789999999998872 2 578999999999998643
No 44
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.93 E-value=0.00058 Score=69.01 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=38.9
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
.++++|.+.+..+ ...+|..+|+||.-. -..++.|||++|+|+|+...
T Consensus 285 ~~~~~v~~~~~~p-~~~lL~~~~~~v~h~------G~~s~~Eal~~GvP~v~~P~ 332 (400)
T 4amg_A 285 ELPANVRVVEWIP-LGALLETCDAIIHHG------GSGTLLTALAAGVPQCVIPH 332 (400)
T ss_dssp CCCTTEEEECCCC-HHHHHTTCSEEEECC------CHHHHHHHHHHTCCEEECCC
T ss_pred cCCCCEEEEeecC-HHHHhhhhhheeccC------CccHHHHHHHhCCCEEEecC
Confidence 5778999988875 568899999988654 24688999999999998543
No 45
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.65 E-value=0.0001 Score=66.96 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=40.2
Q ss_pred CCCcEEEcCCcchHHHHH--HHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 604 LSKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 604 Ls~~V~~~G~~~dv~~ly--saADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++++|++.|+.++ ..++ ++||++|..+ -+.++.|||++|+|+|+...
T Consensus 66 ~~~~v~~~~~~~~-~~~l~~~~ad~~I~~~------G~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 66 LGLNTRLYKWIPQ-NDLLGHPKTRAFITHG------GANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp CCTTEEEESSCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCC
T ss_pred CCCcEEEecCCCH-HHHhcCCCcCEEEEcC------CccHHHHHHHcCCCEEeccc
Confidence 5689999999987 5677 9999999754 25899999999999999875
No 46
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.44 E-value=0.0021 Score=74.53 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=46.6
Q ss_pred CCCC--cEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 603 NLSK--AMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 603 gLs~--~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
..++ +|.|+..-+ -...+|++||++.+||+--.|+.|..-+=||..|.+-|++-.|
T Consensus 590 ~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 590 EVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp TTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESST
T ss_pred ccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCC
Confidence 5677 787776543 4568899999999999866899999999999999999987544
No 47
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=97.23 E-value=0.0035 Score=72.65 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=47.4
Q ss_pred CCCC--cEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCCC
Q 006050 603 NLSK--AMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKKL 659 (663)
Q Consensus 603 gLs~--~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~~ 659 (663)
..++ +|.|+..-+ -...+|++||++.+||.--.|+.|..-+=||..|.+-|++-.|.
T Consensus 600 ~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGa 660 (796)
T 1l5w_A 600 LVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA 660 (796)
T ss_dssp TTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTT
T ss_pred ccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCe
Confidence 5677 788887544 45688999999999998668999999999999999999876543
No 48
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=96.95 E-value=0.011 Score=68.80 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=45.4
Q ss_pred CCC--cEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 604 LSK--AMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 604 Ls~--~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
+++ +|.|+..-+ -...+|++||++.+||+--.|+.|..-+=||..|.+-|++--|
T Consensus 625 v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 625 VGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp TGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred cCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecC
Confidence 466 777776443 4557899999999999866899999999999999999997644
No 49
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=96.85 E-value=0.0022 Score=66.83 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=41.5
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+++++|++.++.++ ..+|.+||++|..+ -+.++.|||++|+|+|+...
T Consensus 316 ~~~~~v~~~~~~~~-~~ll~~ad~~V~~~------G~~t~~Ea~~~G~P~i~~p~ 363 (441)
T 2yjn_A 316 NIPDNVRTVGFVPM-HALLPTCAATVHHG------GPGSWHTAAIHGVPQVILPD 363 (441)
T ss_dssp SCCSSEEECCSCCH-HHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCC
T ss_pred cCCCCEEEecCCCH-HHHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCC
Confidence 46789999999987 78999999999854 25789999999999999865
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.27 E-value=0.011 Score=67.39 Aligned_cols=63 Identities=14% Similarity=0.196 Sum_probs=50.7
Q ss_pred HHHHHHHHHhCCCC-CcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 592 KEILEFLSQHSNLS-KAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 592 k~~L~~l~~~~gLs-~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++.|...+++.|+. ++|.|.+..+ +-...|+.+||++=|-- . +=|.++.||+.+|+|||+-..
T Consensus 565 ~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p--~-~g~tT~~eal~~GvPvvt~~g 630 (723)
T 4gyw_A 565 EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPL--C-NGHTTGMDVLWAGTPMVTMPG 630 (723)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEBCCC
T ss_pred HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCC--c-CCHHHHHHHHHcCCCEEEccC
Confidence 55577778888885 7899999876 66788899999998764 3 447899999999999997553
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.99 E-value=0.022 Score=57.08 Aligned_cols=42 Identities=21% Similarity=0.282 Sum_probs=33.8
Q ss_pred cEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 607 AMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 607 ~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+.+.|.++ +...+++.||++|-+.- |.+-+ |.|+|+|+|+-
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTNDS------GLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecCC------HHHHH-HHHcCCCEEEE
Confidence 346778765 99999999999999964 44545 99999999973
No 52
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.42 E-value=0.028 Score=57.40 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=43.0
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ 656 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd 656 (663)
++..++.. .++...+++++++++|++||+.|.+. |.++.|++++|+|+|.-.
T Consensus 200 l~~~~~~~---~~v~v~~~~~~m~~~m~~aDlvI~~g-------G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 200 LQKFAKLH---NNIRLFIDHENIAKLMNESNKLIISA-------SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp HHHHHHTC---SSEEEEESCSCHHHHHHTEEEEEEES-------SHHHHHHHHTTCCEEEEC
T ss_pred HHHHHhhC---CCEEEEeCHHHHHHHHHHCCEEEECC-------cHHHHHHHHcCCCEEEEe
Confidence 55555543 37999999999999999999999843 469999999999998753
No 53
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=95.01 E-value=0.027 Score=57.96 Aligned_cols=47 Identities=15% Similarity=0.274 Sum_probs=40.6
Q ss_pred CCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 604 Ls~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++++|++.++.++. .+|+.||++|..+- ..+++|||++|+|+|+...
T Consensus 303 ~~~~v~~~~~~~~~-~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~i~~p~ 349 (424)
T 2iya_A 303 VPPNVEVHQWVPQL-DILTKASAFITHAG------MGSTMEALSNAVPMVAVPQ 349 (424)
T ss_dssp CCTTEEEESSCCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCC
T ss_pred CCCCeEEecCCCHH-HHHhhCCEEEECCc------hhHHHHHHHcCCCEEEecC
Confidence 57889999999887 89999999987651 4789999999999999865
No 54
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=94.19 E-value=0.047 Score=56.33 Aligned_cols=48 Identities=10% Similarity=0.088 Sum_probs=40.2
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+++++|.+.++.+. .++|++||++|..+- ..+++|||++|+|+|+...
T Consensus 282 ~~~~~v~~~~~~~~-~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~i~~p~ 329 (415)
T 1iir_A 282 DDGADCFAIGEVNH-QVLFGRVAAVIHHGG------AGTTHVAARAGAPQILLPQ 329 (415)
T ss_dssp SCGGGEEECSSCCH-HHHGGGSSEEEECCC------HHHHHHHHHHTCCEEECCC
T ss_pred CCCCCEEEeCcCCh-HHHHhhCCEEEeCCC------hhHHHHHHHcCCCEEECCC
Confidence 35678999999987 467899999998762 3789999999999999765
No 55
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=93.77 E-value=0.067 Score=55.09 Aligned_cols=48 Identities=13% Similarity=0.152 Sum_probs=40.2
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
.++++|.+.++.+ ..++|++||++|..+ | ..++.|||++|+|+|+...
T Consensus 283 ~~~~~v~~~~~~~-~~~ll~~~d~~v~~~-----G-~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 283 DDRDDCFAIDEVN-FQALFRRVAAVIHHG-----S-AGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp CCCTTEEEESSCC-HHHHGGGSSEEEECC-----C-HHHHHHHHHHTCCEEECCC
T ss_pred CCCCCEEEeccCC-hHHHhccCCEEEecC-----C-hhHHHHHHHcCCCEEEccC
Confidence 3567899999987 578999999999866 2 4699999999999998654
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.38 E-value=0.46 Score=48.94 Aligned_cols=53 Identities=15% Similarity=0.341 Sum_probs=40.0
Q ss_pred HHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+++.+..+ ...+.+.|.++ +...+++.||++|-+-- |.+-+ |.|+|+|+|+-
T Consensus 232 ~~~i~~~~~-~~~~~l~g~~sl~e~~ali~~a~~~i~~Ds------G~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 232 VQPVVEQME-TKPIVATGKFQLGPLAAAMNRCNLLITNDS------GPMHV-GISQGVPIVAL 286 (349)
T ss_dssp HHHHHHTCS-SCCEECTTCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHTTTCCEEEE
T ss_pred HHHHHHhcc-cccEEeeCCCCHHHHHHHHHhCCEEEECCC------CHHHH-HHhcCCCEEEE
Confidence 455555543 24567778776 89999999999999843 55666 88999999984
No 57
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=83.85 E-value=0.85 Score=45.28 Aligned_cols=45 Identities=9% Similarity=0.229 Sum_probs=38.1
Q ss_pred cEEEcCCcchHHHHHH-HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 607 AMLWTPATTRVASLYS-AADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 607 ~V~~~G~~~dv~~lys-aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++...++.+++..+|+ +||++|.=. | ..++.||+++|+|.|.-..
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsha-----G-agTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISHA-----G-TGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEESS-----C-HHHHHHHHHTTCCCCEECC
T ss_pred eEEEeeccchHHHHHHhcCCEEEECC-----c-HHHHHHHHHhCCCEEEEcC
Confidence 5777899999999999 999999866 2 4588999999999987543
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=82.95 E-value=2.1 Score=42.56 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=37.8
Q ss_pred HHHHHHhCCCCCcEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+++.+.. + .+.+.|.++ +...+++.||++|-+-- |.+-+ |.|+|+|+|+-
T Consensus 226 ~~~i~~~~--~-~~~l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 226 AKRLAEGF--A-YVEVLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITV 278 (326)
T ss_dssp HHHHHTTC--T-TEEECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred HHHHHhhC--C-cccccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEE
Confidence 44454432 3 467788766 99999999999999953 55666 66899999974
No 59
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=79.15 E-value=2.6 Score=43.14 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=37.8
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEe
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE 299 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~ 299 (663)
|..+||+++... ..|--.-++.||.+|.++||+|++++. +...+.+...|+.+++
T Consensus 10 m~~~~Il~~~~~--~~GHv~p~l~la~~L~~~Gh~V~~~~~---~~~~~~~~~~g~~~~~ 64 (424)
T 2iya_A 10 VTPRHISFFNIP--GHGHVNPSLGIVQELVARGHRVSYAIT---DEFAAQVKAAGATPVV 64 (424)
T ss_dssp -CCCEEEEECCS--CHHHHHHHHHHHHHHHHTTCEEEEEEC---GGGHHHHHHHTCEEEE
T ss_pred cccceEEEEeCC--CCcccchHHHHHHHHHHCCCeEEEEeC---HHHHHHHHhCCCEEEe
Confidence 345788887322 335556689999999999999998763 2334556666777764
No 60
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=73.91 E-value=9.5 Score=38.85 Aligned_cols=72 Identities=22% Similarity=0.246 Sum_probs=45.8
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhh-cCccEEEECch
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTS-MKADLVIAGSA 320 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~-~k~DLVianSa 320 (663)
.+||.+| ..||+ -|-.+|..|.++|++|++.-........++|...||++........+ . ..+|+|+..++
T Consensus 4 ~~~i~~i----GiGg~--Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l--~~~~~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHII----GIGGT--FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQL--DEFKADVYVIGNV 75 (326)
T ss_dssp CCEEEEE----SCCSH--HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGG--GSCCCSEEEECTT
T ss_pred CcEEEEE----EECHH--HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHc--CCCCCCEEEECCC
Confidence 3566665 34554 34468889999999998754322223456788899998754222111 2 36899998765
Q ss_pred h
Q 006050 321 V 321 (663)
Q Consensus 321 v 321 (663)
+
T Consensus 76 i 76 (326)
T 3eag_A 76 A 76 (326)
T ss_dssp C
T ss_pred c
Confidence 4
No 61
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=73.62 E-value=37 Score=40.18 Aligned_cols=56 Identities=11% Similarity=0.134 Sum_probs=47.1
Q ss_pred CCCC--cEEEcCCcc--hHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCCC
Q 006050 603 NLSK--AMLWTPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQKK 658 (663)
Q Consensus 603 gLs~--~V~~~G~~~--dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~~ 658 (663)
.+.+ +|.|++.-. -...++.+|||....|.--.|.-|-.=+=+|.-|.+-|+|--|
T Consensus 683 ~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDG 742 (879)
T 1ygp_A 683 SIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDG 742 (879)
T ss_dssp GGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCT
T ss_pred hhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccc
Confidence 3556 788888754 5667899999999999866899999999999999999998644
No 62
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=71.48 E-value=73 Score=35.77 Aligned_cols=47 Identities=11% Similarity=0.159 Sum_probs=37.9
Q ss_pred CCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC
Q 006050 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ 656 (663)
Q Consensus 603 gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd 656 (663)
++++.+.-.....++.++|.+||+++.= ++-++.|++..+.|||-..
T Consensus 595 ~~~~~~~~~~~~~di~~ll~~aD~lITD-------ySSv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 595 GYENFAIDVSNYNDVSELFLISDCLITD-------YSSVMFDYGILKRPQFFFA 641 (729)
T ss_dssp TCTTTEEECTTCSCHHHHHHTCSEEEES-------SCTHHHHHGGGCCCEEEEC
T ss_pred ccCCcEEeCCCCcCHHHHHHHhCEEEee-------chHHHHhHHhhCCCEEEec
Confidence 3456677777667999999999998853 3458999999999999873
No 63
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=71.17 E-value=8.1 Score=40.26 Aligned_cols=73 Identities=19% Similarity=0.129 Sum_probs=43.6
Q ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCC-----CCChhHHhcCCeEEEeCCCCc-------hh
Q 006050 239 FVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR-----GGLMPELARRKIKVLEDRGEP-------SF 306 (663)
Q Consensus 239 ~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~-----GgL~~eL~~~gIkVl~~~~~~-------sf 306 (663)
+|+++||+++ | .+-.-..+...|.+.|++|.+|+...+ ..+.+...+.||+++...... .+
T Consensus 19 ~~~~mrIvf~------G-~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~ 91 (329)
T 2bw0_A 19 YFQSMKIAVI------G-QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV 91 (329)
T ss_dssp --CCCEEEEE------C-CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHH
T ss_pred cCCCCEEEEE------c-CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHH
Confidence 4667899888 3 343334556788888999887764221 223344556899987643211 11
Q ss_pred ---hhhcCccEEEEC
Q 006050 307 ---KTSMKADLVIAG 318 (663)
Q Consensus 307 ---k~~~k~DLVian 318 (663)
-...++|+++.-
T Consensus 92 ~~~l~~~~~Dliv~a 106 (329)
T 2bw0_A 92 VAKYQALGAELNVLP 106 (329)
T ss_dssp HHHHHTTCCSEEEES
T ss_pred HHHHHhcCCCEEEEe
Confidence 134689999864
No 64
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=69.35 E-value=17 Score=34.15 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=44.4
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCe-EEEeCCCCchh-hhhcCccEEEEC
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKI-KVLEDRGEPSF-KTSMKADLVIAG 318 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gI-kVl~~~~~~sf-k~~~k~DLVian 318 (663)
.+|+||+. ||.--.-..++++|++.|++|.+++ +...-.+++...++ .++.......+ .....+|.|+.+
T Consensus 20 ~~~~ilVt------GatG~iG~~l~~~L~~~G~~V~~~~--R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVV------GANGKVARYLLSELKNKGHEPVAMV--RNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEE--SSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEE------CCCChHHHHHHHHHHhCCCeEEEEE--CChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 35666554 3334456788999999999988765 44434556666788 77653322222 223478999876
Q ss_pred ch
Q 006050 319 SA 320 (663)
Q Consensus 319 Sa 320 (663)
..
T Consensus 92 ag 93 (236)
T 3e8x_A 92 AG 93 (236)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 65
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=68.10 E-value=4.8 Score=41.71 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=37.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED 300 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~ 300 (663)
.+||+++.. ..+|--.-++.||.+|.++||+|.+++. ....+.+...|++++..
T Consensus 20 ~mrIl~~~~--~~~GHv~p~l~la~~L~~~GheV~~~~~---~~~~~~v~~~G~~~~~i 73 (441)
T 2yjn_A 20 HMRVVFSSM--ASKSHLFGLVPLAWAFRAAGHEVRVVAS---PALTEDITAAGLTAVPV 73 (441)
T ss_dssp CCEEEEECC--SCHHHHTTTHHHHHHHHHTTCEEEEEEC---GGGHHHHHTTTCCEEEC
T ss_pred ccEEEEEcC--CCcchHhHHHHHHHHHHHCCCeEEEEeC---chhHHHHHhCCCceeec
Confidence 478888822 2223334578999999999999998762 23455566788887653
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=62.91 E-value=9.8 Score=39.03 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=34.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEe
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE 299 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~ 299 (663)
|||+++. ....|--.-++.||++|.++||+|.+++... ..+.+...|++++.
T Consensus 1 M~Il~~~--~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~---~~~~v~~~g~~~~~ 52 (415)
T 1iir_A 1 MRVLLAT--CGSRGDTEPLVALAVRVRDLGADVRMCAPPD---CAERLAEVGVPHVP 52 (415)
T ss_dssp CEEEEEC--CSCHHHHHHHHHHHHHHHHTTCEEEEEECGG---GHHHHHHTTCCEEE
T ss_pred CeEEEEc--CCCchhHHHHHHHHHHHHHCCCeEEEEcCHH---HHHHHHHcCCeeee
Confidence 4777763 2233444568999999999999999886332 34445556766553
No 67
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=60.76 E-value=32 Score=31.16 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=41.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHh--cCCeEEEeCC
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA--RRKIKVLEDR 301 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~--~~gIkVl~~~ 301 (663)
||++.|+..-...|--...++||..|.+.|..|.++-+...+.+...+. ..++.+++..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~ 61 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAA 61 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecC
Confidence 4677776665556777778999999999999999887765554444332 2446666543
No 68
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=59.13 E-value=7.5 Score=39.83 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=35.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEe
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE 299 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~ 299 (663)
|||+++... ..|--.-++.||.+|.++||+|.+++.. ...+.+...|+++++
T Consensus 1 MrIl~~~~~--~~GH~~p~l~la~~L~~~Gh~V~~~~~~---~~~~~v~~~g~~~~~ 52 (416)
T 1rrv_A 1 MRVLLSVCG--TRGDVEIGVALADRLKALGVQTRMCAPP---AAEERLAEVGVPHVP 52 (416)
T ss_dssp CEEEEEEES--CHHHHHHHHHHHHHHHHTTCEEEEEECG---GGHHHHHHHTCCEEE
T ss_pred CeEEEEecC--CCccHHHHHHHHHHHHHCCCeEEEEeCH---HHHHHHHHcCCeeee
Confidence 478877432 2344456899999999999999988632 234445556776654
No 69
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=58.19 E-value=9.6 Score=40.60 Aligned_cols=45 Identities=18% Similarity=0.190 Sum_probs=34.0
Q ss_pred CcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 606 KAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 606 ~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++++..+..+.. .+|+ ++|+||.-. | .+.++||+++|+|+|+-..
T Consensus 325 ~~~~v~~w~pq~-~vL~h~~~~~fvth~-----G-~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 325 GYGMVVPWAPQA-EVLAHEAVGAFVTHC-----G-WNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEEECC-----C-HHHHHHHHHHTCCEEECCC
T ss_pred CceEEecCCCHH-HHhcCCcCCEEEecC-----C-cchHHHHHHhCceEEecCC
Confidence 467777777764 6788 677887755 2 4588999999999998643
No 70
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=57.69 E-value=26 Score=38.30 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=46.7
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECchh
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSav 321 (663)
.++|.+| ..||. -|-.+|..|.++|++|++.-........++|+..||++........+ ...+|+|+..+++
T Consensus 19 ~~~i~~i----GiGg~--Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~--~~~~d~vV~Spgi 90 (524)
T 3hn7_A 19 GMHIHIL----GICGT--FMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHL--QPAPDLVVVGNAM 90 (524)
T ss_dssp CCEEEEE----TTTSH--HHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGG--CSCCSEEEECTTC
T ss_pred CCEEEEE----EecHh--hHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHc--CCCCCEEEECCCc
Confidence 4666665 45565 45678899999999998654222223456788899998754222111 2368999987765
No 71
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=52.58 E-value=13 Score=39.54 Aligned_cols=48 Identities=17% Similarity=0.053 Sum_probs=33.9
Q ss_pred CCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 605 s~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+++++..+..+.. .+|+.+++-++=++ +=.+.+.||+++|+|+|+-..
T Consensus 352 ~~~~~v~~~~pq~-~~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 352 ADRGLIASWCPQD-KVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp TTTEEEESCCCHH-HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEeecCHH-HHhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCc
Confidence 4577788877766 48877776333333 224588999999999998653
No 72
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.21 E-value=18 Score=35.86 Aligned_cols=84 Identities=12% Similarity=0.240 Sum_probs=45.8
Q ss_pred ccccCCccccccccC--CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHh-cCCeEEEeCCCC
Q 006050 227 SGTCDRKGDFARFVW--SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA-RRKIKVLEDRGE 303 (663)
Q Consensus 227 ~~~c~~k~~~~~~~~--~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~-~~gIkVl~~~~~ 303 (663)
+|..+-..-|.-++. .+++|+| ||++ .....++.|.+.|++|.++... ...-..++. ..+|.++.....
T Consensus 14 ~~~~~~~~~~Pifl~L~gk~VLVV------GgG~-va~~ka~~Ll~~GA~VtVvap~-~~~~l~~l~~~~~i~~i~~~~~ 85 (223)
T 3dfz_A 14 SGHIEGRHMYTVMLDLKGRSVLVV------GGGT-IATRRIKGFLQEGAAITVVAPT-VSAEINEWEAKGQLRVKRKKVG 85 (223)
T ss_dssp --------CCEEEECCTTCCEEEE------CCSH-HHHHHHHHHGGGCCCEEEECSS-CCHHHHHHHHTTSCEEECSCCC
T ss_pred cCcccccCccccEEEcCCCEEEEE------CCCH-HHHHHHHHHHHCCCEEEEECCC-CCHHHHHHHHcCCcEEEECCCC
Confidence 344444445554433 5788887 5553 5667788999999999876422 111122333 345777654332
Q ss_pred chhhhhcCccEEEECch
Q 006050 304 PSFKTSMKADLVIAGSA 320 (663)
Q Consensus 304 ~sfk~~~k~DLVianSa 320 (663)
. .....+|+|++.+.
T Consensus 86 ~--~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 86 E--EDLLNVFFIVVATN 100 (223)
T ss_dssp G--GGSSSCSEEEECCC
T ss_pred H--hHhCCCCEEEECCC
Confidence 2 22457999998763
No 73
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=50.89 E-value=16 Score=39.38 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=34.7
Q ss_pred CCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeC
Q 006050 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQ 656 (663)
Q Consensus 605 s~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd 656 (663)
+++++..+..+. ..+++.+||-++-+++ | -+.++||+++|+|+|+-.
T Consensus 326 ~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~---G-~~S~~Eal~~GvP~i~~P 372 (454)
T 3hbf_A 326 KTKGKIVAWAPQ-VEILKHSSVGVFLTHS---G-WNSVLECIVGGVPMISRP 372 (454)
T ss_dssp TTTEEEESSCCH-HHHHHSTTEEEEEECC---C-HHHHHHHHHHTCCEEECC
T ss_pred CCceEEEeeCCH-HHHHhhcCcCeEEecC---C-cchHHHHHHcCCCEecCc
Confidence 346777777776 4889999965555551 2 458899999999999854
No 74
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=49.77 E-value=17 Score=38.64 Aligned_cols=45 Identities=22% Similarity=0.241 Sum_probs=33.8
Q ss_pred CcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 606 KAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 606 ~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
++++..+..+.. .+|+ ++|+||.-. | .+.++||+++|+|+|+-..
T Consensus 332 ~~~~v~~w~pq~-~vL~h~~~~~fvth~-----G-~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 332 GKGMICGWAPQV-EVLAHKAIGGFVSHC-----G-WNSILESMWFGVPILTWPI 378 (463)
T ss_dssp CSEEEESSCCHH-HHHHSTTEEEEEECC-----C-HHHHHHHHHTTCCEEECCC
T ss_pred CCEEEEccCCHH-HHhCCCccCeEEecC-----C-chhHHHHHHcCCCeeeccc
Confidence 467777777766 4675 677888765 2 4688999999999998643
No 75
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=49.57 E-value=40 Score=32.24 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=41.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGS 319 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianS 319 (663)
++|||++ ||-..--.|+.+|.++|++|.+++ +...-...+...+++++...... +. ...+|.|+...
T Consensus 5 ~~~ilVt-------GaG~iG~~l~~~L~~~g~~V~~~~--r~~~~~~~~~~~~~~~~~~D~~d-~~-~~~~d~vi~~a 71 (286)
T 3ius_A 5 TGTLLSF-------GHGYTARVLSRALAPQGWRIIGTS--RNPDQMEAIRASGAEPLLWPGEE-PS-LDGVTHLLIST 71 (286)
T ss_dssp CCEEEEE-------TCCHHHHHHHHHHGGGTCEEEEEE--SCGGGHHHHHHTTEEEEESSSSC-CC-CTTCCEEEECC
T ss_pred cCcEEEE-------CCcHHHHHHHHHHHHCCCEEEEEE--cChhhhhhHhhCCCeEEEecccc-cc-cCCCCEEEECC
Confidence 4666655 233344678899999999998765 43333455666788877532211 22 45789887643
No 76
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=48.47 E-value=26 Score=37.23 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=44.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCC--CCChhHHhcCCeEEEeCCCCchhhhhcC-ccEEEEC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR--GGLMPELARRKIKVLEDRGEPSFKTSMK-ADLVIAG 318 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~--GgL~~eL~~~gIkVl~~~~~~sfk~~~k-~DLVian 318 (663)
.+||++| ..||+- |..|+.|.++|++|++.-.... ....++|...||++......... ... +|+|+..
T Consensus 9 ~k~v~vi----G~G~sG---~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~--~~~~~d~vv~s 79 (451)
T 3lk7_A 9 NKKVLVL----GLARSG---EAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLEL--LDEDFCYMIKN 79 (451)
T ss_dssp TCEEEEE----CCTTTH---HHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGG--GGSCEEEEEEC
T ss_pred CCEEEEE----eeCHHH---HHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHh--hcCCCCEEEEC
Confidence 5777776 334433 4469999999999986532110 12345788899998754332211 134 8999987
Q ss_pred chh
Q 006050 319 SAV 321 (663)
Q Consensus 319 Sav 321 (663)
+++
T Consensus 80 pgi 82 (451)
T 3lk7_A 80 PGI 82 (451)
T ss_dssp TTS
T ss_pred CcC
Confidence 654
No 77
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=44.96 E-value=34 Score=31.36 Aligned_cols=61 Identities=15% Similarity=0.037 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-CchhhhhcCccEEEECch
Q 006050 258 PLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-EPSFKTSMKADLVIAGSA 320 (663)
Q Consensus 258 p~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~~sfk~~~k~DLVianSa 320 (663)
-..-..++++|.+.|++|.+++ +...-.+++...++.++.... +........+|.|+.+..
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~--R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 10 GRAGSAIVAEARRRGHEVLAVV--RDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEE--ecccccccccCCCceEEecccccccHhhcccCCEEEECCc
Confidence 3456788999999999998765 333223344456777764321 111134457899887643
No 78
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=44.10 E-value=44 Score=32.31 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEcC----CcchHHHHHHHccEEEEcCCCCCCCCc-----------HHHHHHHHcCCCE
Q 006050 588 VPYVKEILEFLSQHSNLSKAMLWTP----ATTRVASLYSAADVYVINSQGLGETFG-----------RVTIEAMAFGVPM 652 (663)
Q Consensus 588 ~~y~k~~L~~l~~~~gLs~~V~~~G----~~~dv~~lysaADV~V~pS~~~~E~FG-----------~ViiEAMA~GlPV 652 (663)
.+|.+. +....+++|. .+..+. ..++..+.+..||++++|- ++++- -++-|+...|+|+
T Consensus 43 ~~~~~s-~~~a~~~lG~--~v~~~~i~~~~~~~~~~~l~~ad~I~l~G---G~~~~l~~~L~~~gl~~~l~~~~~~G~p~ 116 (206)
T 3l4e_A 43 TFYVEA-GKKALESLGL--LVEELDIATESLGEITTKLRKNDFIYVTG---GNTFFLLQELKRTGADKLILEEIAAGKLY 116 (206)
T ss_dssp CHHHHH-HHHHHHHTTC--EEEECCTTTSCHHHHHHHHHHSSEEEECC---SCHHHHHHHHHHHTHHHHHHHHHHTTCEE
T ss_pred HHHHHH-HHHHHHHcCC--eEEEEEecCCChHHHHHHHHhCCEEEECC---CCHHHHHHHHHHCChHHHHHHHHHcCCeE
Confidence 457666 5555666787 477773 4557778999999999987 55542 2567777889999
Q ss_pred EEeCCCC
Q 006050 653 LEAQKKL 659 (663)
Q Consensus 653 Vatd~~~ 659 (663)
+++-.|.
T Consensus 117 ~G~sAGa 123 (206)
T 3l4e_A 117 IGESAGA 123 (206)
T ss_dssp EEETHHH
T ss_pred EEECHHH
Confidence 9987653
No 79
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=43.71 E-value=36 Score=35.27 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=43.1
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCC--C--C-------ChhHHhcCCeEEEeCCCCc--h-
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR--G--G-------LMPELARRKIKVLEDRGEP--S- 305 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~--G--g-------L~~eL~~~gIkVl~~~~~~--s- 305 (663)
|.++||+|+ |.|-......+.|.+.||+|..|+...+ . | +.+...+.||+++...... .
T Consensus 5 ~~~mrivf~-------Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~ 77 (318)
T 3q0i_A 5 SQSLRIVFA-------GTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDES 77 (318)
T ss_dssp --CCEEEEE-------CCSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHH
T ss_pred ccCCEEEEE-------ecCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHH
Confidence 346899988 3344444555778888999987764321 1 1 2344567899998643221 1
Q ss_pred --hhhhcCccEEEEC
Q 006050 306 --FKTSMKADLVIAG 318 (663)
Q Consensus 306 --fk~~~k~DLVian 318 (663)
.-...++|++++-
T Consensus 78 ~~~l~~~~~Dliv~~ 92 (318)
T 3q0i_A 78 KQQLAALNADLMVVV 92 (318)
T ss_dssp HHHHHTTCCSEEEES
T ss_pred HHHHHhcCCCEEEEe
Confidence 1235689999864
No 80
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=42.60 E-value=39 Score=32.86 Aligned_cols=73 Identities=18% Similarity=0.072 Sum_probs=41.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-Cc-hhh--------hhcC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-EP-SFK--------TSMK 311 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~~-sfk--------~~~k 311 (663)
..|.++|+ ||+--.-..+|+.|.+.|++|.++.. ....+.+++...++..+.... +. +.. ...+
T Consensus 26 ~~k~vlVT-----Gas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 26 SSAPILIT-----GASQRVGLHCALRLLEHGHRVIISYR-TEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp -CCCEEES-----STTSHHHHHHHHHHHHTTCCEEEEES-SCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 34556662 33333457899999999999876653 233345556555666654321 11 111 1236
Q ss_pred ccEEEECch
Q 006050 312 ADLVIAGSA 320 (663)
Q Consensus 312 ~DLVianSa 320 (663)
+|+++.+..
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 898887653
No 81
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=42.42 E-value=1e+02 Score=28.03 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=42.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHH-HHHHHHH-CCCeEEEEEEcCCCCChhHH-hcCCeEEEeCCCCchhhhhcCccEEEECc
Q 006050 243 RKFILIFHELSMTGAPLSMME-LATELLS-CGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEPSFKTSMKADLVIAGS 319 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smme-LA~~L~s-~G~~V~vVvLs~~GgL~~eL-~~~gIkVl~~~~~~sfk~~~k~DLVianS 319 (663)
+||++|..+ .+|.-..+.+ ++..|.+ .|++|.++-+... ..+.+ ...+... .............+|.|+..+
T Consensus 2 mkilii~~S--~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~aD~ii~gs 76 (198)
T 3b6i_A 2 AKVLVLYYS--MYGHIETMARAVAEGASKVDGAEVVVKRVPET--MPPQLFEKAGGKT-QTAPVATPQELADYDAIIFGT 76 (198)
T ss_dssp CEEEEEECC--SSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC--SCHHHHHHTTCCC-CCSCBCCGGGGGGCSEEEEEE
T ss_pred CeEEEEEeC--CCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc--Cchhhhhhccccc-ccCchhhHHHHHHCCEEEEEe
Confidence 588888877 5787766655 7777777 8999998877643 22222 1112100 000011134456789998776
Q ss_pred h
Q 006050 320 A 320 (663)
Q Consensus 320 a 320 (663)
+
T Consensus 77 P 77 (198)
T 3b6i_A 77 P 77 (198)
T ss_dssp E
T ss_pred C
Confidence 4
No 82
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=40.12 E-value=25 Score=35.01 Aligned_cols=75 Identities=9% Similarity=0.059 Sum_probs=42.3
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC-----ChhHHhcCCeEEEeCCC-C-chhhh-hc-
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-----LMPELARRKIKVLEDRG-E-PSFKT-SM- 310 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg-----L~~eL~~~gIkVl~~~~-~-~sfk~-~~- 310 (663)
|.+++||++ ||.-..--.++++|.+.|++|.+++-+.... ...++...++.++.... + .++.. ..
T Consensus 8 M~~~~IlVt------GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~ 81 (346)
T 3i6i_A 8 SPKGRVLIA------GATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE 81 (346)
T ss_dssp ---CCEEEE------CTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCeEEEE------CCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence 344566655 3333455778899999999998776332111 11244567888875432 1 22222 23
Q ss_pred -CccEEEECch
Q 006050 311 -KADLVIAGSA 320 (663)
Q Consensus 311 -k~DLVianSa 320 (663)
.+|.||...+
T Consensus 82 ~~~d~Vi~~a~ 92 (346)
T 3i6i_A 82 HEIDIVVSTVG 92 (346)
T ss_dssp TTCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7999987543
No 83
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=39.14 E-value=1.2e+02 Score=29.80 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChh---HHhc-------CCeEEEeCCC-C-chhhh
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP---ELAR-------RKIKVLEDRG-E-PSFKT 308 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~---eL~~-------~gIkVl~~~~-~-~sfk~ 308 (663)
.+++||+. ||.--.-..|+..|.+.|++|.+++-... .... .+.. .++.++.... + ..+..
T Consensus 24 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLIT------GVAGFIGSNLLEKLLKLNQVVIGLDNFST-GHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECCSS-CCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEE------CCCcHHHHHHHHHHHHCCCEEEEEeCCCC-CchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 45666554 44444667899999999999987763322 2222 2222 5777765322 1 12222
Q ss_pred -hcCccEEEECch
Q 006050 309 -SMKADLVIAGSA 320 (663)
Q Consensus 309 -~~k~DLVianSa 320 (663)
..++|.|+...+
T Consensus 97 ~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 97 VMKGVDHVLHQAA 109 (351)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhcCCCEEEECCc
Confidence 237899886543
No 84
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=38.95 E-value=60 Score=29.44 Aligned_cols=59 Identities=15% Similarity=0.257 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-CchhhhhcCccEEEECc
Q 006050 258 PLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-EPSFKTSMKADLVIAGS 319 (663)
Q Consensus 258 p~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~~sfk~~~k~DLVianS 319 (663)
--.-..++++|.+.|++|.+++ +...-..++. .++.++.... +........+|+|+.+.
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~--R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~a 69 (221)
T 3ew7_A 10 GRAGSRILEEAKNRGHEVTAIV--RNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAY 69 (221)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE--SCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred chhHHHHHHHHHhCCCEEEEEE--cCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECC
Confidence 3455788999999999998765 3332223333 6777764321 11113445789998654
No 85
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=38.21 E-value=40 Score=36.44 Aligned_cols=70 Identities=17% Similarity=0.255 Sum_probs=44.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECchhh
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVC 322 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSav~ 322 (663)
++|.+| ..||.-+ -.+|+.|.++|++|++.-. +......+|...||++....... ....+|+|+..+++.
T Consensus 23 ~~v~vi----GiG~sG~--s~~A~~l~~~G~~V~~~D~-~~~~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 23 RHIHFV----GIGGAGM--GGIAEVLANEGYQISGSDL-APNSVTQHLTALGAQIYFHHRPE---NVLDASVVVVSTAIS 92 (494)
T ss_dssp CEEEEE----TTTSTTH--HHHHHHHHHTTCEEEEECS-SCCHHHHHHHHTTCEEESSCCGG---GGTTCSEEEECTTSC
T ss_pred CEEEEE----EEcHhhH--HHHHHHHHhCCCeEEEEEC-CCCHHHHHHHHCCCEEECCCCHH---HcCCCCEEEECCCCC
Confidence 566655 4455432 3479999999999986421 22234567888999987542221 234689999877653
No 86
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=36.94 E-value=45 Score=32.18 Aligned_cols=37 Identities=11% Similarity=-0.017 Sum_probs=24.1
Q ss_pred cccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 238 RFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 238 ~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
.-|...|+++|+ ||+--.-..+|.+|++.|++|.++.
T Consensus 21 ~~m~~~k~vlIT-----Gas~gIG~a~a~~l~~~G~~V~~~~ 57 (272)
T 4e3z_A 21 QSMSDTPVVLVT-----GGSRGIGAAVCRLAARQGWRVGVNY 57 (272)
T ss_dssp ---CCSCEEEET-----TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhccCCCEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEc
Confidence 445566778872 3333345789999999999986553
No 87
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=35.91 E-value=75 Score=30.90 Aligned_cols=33 Identities=18% Similarity=0.023 Sum_probs=22.4
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
.+++||+. ||+--.-..++.+|.+.|++|.++.
T Consensus 2 ~~~~vlVt------GatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 2 SGKRALIT------GIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEE------CCCChHHHHHHHHHHHCCCEEEEEE
Confidence 34565543 4434456788999999999987764
No 88
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=35.44 E-value=64 Score=27.10 Aligned_cols=38 Identities=11% Similarity=0.212 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCC-CHHHHHHHHHHHHHHC-CC-eEEEEEE
Q 006050 243 RKFILIFHELSMT-GAPLSMMELATELLSC-GA-TVSAVVL 280 (663)
Q Consensus 243 kKILLI~heLs~g-GAp~smmeLA~~L~s~-G~-~V~vVvL 280 (663)
+|+++|+++-..+ ......+.+|..+.+. |+ +|.++..
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~ 42 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLM 42 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEE
Confidence 4788887765433 3445578999999988 99 9977653
No 89
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=35.01 E-value=50 Score=30.40 Aligned_cols=37 Identities=27% Similarity=0.321 Sum_probs=27.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHH-HHHHHHH-CCCeEEEEEEc
Q 006050 243 RKFILIFHELSMTGAPLSMME-LATELLS-CGATVSAVVLS 281 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smme-LA~~L~s-~G~~V~vVvLs 281 (663)
+||++|..+ ++|.-..+.+ ++..|.+ .|++|.++.+.
T Consensus 5 ~kiliiy~S--~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 5 GKVLVIYDT--RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp EEEEEEECC--SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CEEEEEEEC--CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 588888876 6787766655 7778887 89998877654
No 90
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=34.92 E-value=66 Score=32.08 Aligned_cols=83 Identities=10% Similarity=0.074 Sum_probs=42.1
Q ss_pred ccCCccccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEEcCCCCChhHHhcCCeEEEeCCCC---c
Q 006050 229 TCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGLMPELARRKIKVLEDRGE---P 304 (663)
Q Consensus 229 ~c~~k~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~-G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~---~ 304 (663)
-|..++.... |.+++||++ ||.--.-..|+.+|.+. |++|.+++-+ ...+.......++.++..... .
T Consensus 12 ~~~~~~~~~~-m~~~~vlVt------GatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~v~~~~~Dl~~d~~ 83 (372)
T 3slg_A 12 LEAQTQGPGS-MKAKKVLIL------GVNGFIGHHLSKRILETTDWEVFGMDMQ-TDRLGDLVKHERMHFFEGDITINKE 83 (372)
T ss_dssp ------------CCCEEEEE------SCSSHHHHHHHHHHHHHSSCEEEEEESC-CTTTGGGGGSTTEEEEECCTTTCHH
T ss_pred hhhhhcCCcc-cCCCEEEEE------CCCChHHHHHHHHHHhCCCCEEEEEeCC-hhhhhhhccCCCeEEEeCccCCCHH
Confidence 3666666554 345666654 44444567888999988 9999877632 233333333468887753322 1
Q ss_pred hhh-hhcCccEEEECc
Q 006050 305 SFK-TSMKADLVIAGS 319 (663)
Q Consensus 305 sfk-~~~k~DLVianS 319 (663)
.+. ...++|.|+...
T Consensus 84 ~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 84 WVEYHVKKCDVILPLV 99 (372)
T ss_dssp HHHHHHHHCSEEEECB
T ss_pred HHHHHhccCCEEEEcC
Confidence 222 223689988643
No 91
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=34.90 E-value=60 Score=29.61 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=29.3
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHH-HHHHHHHCCCeEEEEEEcC
Q 006050 240 VWSRKFILIFHELSMTGAPLSMME-LATELLSCGATVSAVVLSK 282 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smme-LA~~L~s~G~~V~vVvLs~ 282 (663)
|..+||++|..+. +|.-..+.+ +++.|.+.|++|.++-+..
T Consensus 3 M~M~kilii~~S~--~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSR--HGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCS--SSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCC--CChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 3446899998874 776665554 7788888999998876543
No 92
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=34.75 E-value=41 Score=34.78 Aligned_cols=71 Identities=18% Similarity=0.184 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCC---C-C-------ChhHHhcCCeEEEeCCCCc--h--
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR---G-G-------LMPELARRKIKVLEDRGEP--S-- 305 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~---G-g-------L~~eL~~~gIkVl~~~~~~--s-- 305 (663)
+++||+|+-. |-..+...+.|.+.||+|..|+...+ | + +.+...+.||+|+...... .
T Consensus 1 ~~mrivf~Gt-------p~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~ 73 (314)
T 3tqq_A 1 MSLKIVFAGT-------PQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQ 73 (314)
T ss_dssp CCCEEEEEEC-------SGGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHH
T ss_pred CCcEEEEECC-------CHHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHH
Confidence 4678888822 22223445777788999988764321 1 1 1234456899998643221 1
Q ss_pred -hhhhcCccEEEEC
Q 006050 306 -FKTSMKADLVIAG 318 (663)
Q Consensus 306 -fk~~~k~DLVian 318 (663)
.-...++|++++-
T Consensus 74 ~~l~~~~~Dliv~~ 87 (314)
T 3tqq_A 74 EKLIAMNADVMVVV 87 (314)
T ss_dssp HHHHTTCCSEEEEE
T ss_pred HHHHhcCCCEEEEc
Confidence 1235689999863
No 93
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=34.69 E-value=1.3e+02 Score=30.24 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=39.0
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+.+++.++.+ ...++..+++. .+|++++.+- ...---.+.+|+..|++|++-
T Consensus 43 ~~~~~~~~~~~------~~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl~E 97 (330)
T 3e9m_A 43 AQKMAKELAIP------VAYGSYEELCKDETIDIIYIPTY--NQGHYSAAKLALSQGKPVLLE 97 (330)
T ss_dssp HHHHHHHTTCC------CCBSSHHHHHHCTTCSEEEECCC--GGGHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHcCCC------ceeCCHHHHhcCCCCCEEEEcCC--CHHHHHHHHHHHHCCCeEEEe
Confidence 55667777664 23468888888 7898888876 445555678999999999863
No 94
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=34.52 E-value=47 Score=31.84 Aligned_cols=43 Identities=23% Similarity=0.140 Sum_probs=34.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG 285 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg 285 (663)
+.+++.|+..-...|.-...++||..|+ +|..|.++-+...++
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 4677777766666677788899999999 999999988776554
No 95
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=33.89 E-value=44 Score=35.73 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=29.6
Q ss_pred CCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEeCC
Q 006050 612 PATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEAQK 657 (663)
Q Consensus 612 G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVatd~ 657 (663)
+..+.. .+|+.+||-++-+++ | -+.++||+++|+|+|+-..
T Consensus 345 ~w~Pq~-~vL~h~~v~~fvtHg---G-~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 345 FWAPQA-QVLAHPSTGGFLTHC---G-WNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp SCCCHH-HHHHSTTEEEEEECC---C-HHHHHHHHHHTCCEEECCC
T ss_pred CccCHH-HHhCCCCcCeEEecc---c-chhHHHHHHcCCCEEeccc
Confidence 455554 899999975554541 3 3588999999999998543
No 96
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=33.86 E-value=35 Score=36.30 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=27.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEc
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs 281 (663)
.+|+++. - -..|--.-|++||++|.++||+|++++..
T Consensus 9 ~~vl~~p-~-p~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 9 PHVVMIP-Y-PVQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CEEEEEC-C-SSHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CEEEEec-C-ccchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4665553 2 23566667999999999999999998744
No 97
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=33.50 E-value=1.7e+02 Score=28.42 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=40.0
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECc
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianS 319 (663)
|+||+. ||+--.-..|+..|.+.|++|.+++- ...-.+++...++.++.... + .++.. ...+|.|+...
T Consensus 14 M~ilVt------GatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a 85 (342)
T 2x4g_A 14 VKYAVL------GATGLLGHHAARAIRAAGHDLVLIHR--PSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSA 85 (342)
T ss_dssp CEEEEE------STTSHHHHHHHHHHHHTTCEEEEEEC--TTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred CEEEEE------CCCcHHHHHHHHHHHHCCCEEEEEec--ChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 465544 44444567889999999999987753 22223445445777664322 1 22322 23689987654
No 98
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=32.53 E-value=81 Score=33.27 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECch
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSA 320 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSa 320 (663)
..+||++| |.++ +-|..|+.|.++||+|+..-.........+|. .|+++........ ....+|+|+..+.
T Consensus 4 ~~~~v~vi------G~G~-~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~--~~~~~d~vV~s~g 73 (439)
T 2x5o_A 4 QGKNVVII------GLGL-TGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDE--WLMAADLIVASPG 73 (439)
T ss_dssp TTCCEEEE------CCHH-HHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHH--HHHTCSEEEECTT
T ss_pred CCCEEEEE------eecH-HHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHH--HhccCCEEEeCCC
Confidence 35777766 4333 44555899999999998654221111224566 8998864332211 1126899988765
Q ss_pred h
Q 006050 321 V 321 (663)
Q Consensus 321 v 321 (663)
+
T Consensus 74 i 74 (439)
T 2x5o_A 74 I 74 (439)
T ss_dssp S
T ss_pred C
Confidence 4
No 99
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.43 E-value=44 Score=32.39 Aligned_cols=25 Identities=24% Similarity=0.190 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 255 TGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
||+--.--.|+++|.++||+|.+++
T Consensus 7 GatGfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 7 GGTGFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4445566789999999999998765
No 100
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.37 E-value=31 Score=33.77 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=21.9
Q ss_pred cccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 238 RFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 238 ~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
..|...|+++|+ ||+--.-..+|+.|++.|++|.++.
T Consensus 19 ~~m~~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~ 55 (279)
T 3sju_A 19 SHMSRPQTAFVT-----GVSSGIGLAVARTLAARGIAVYGCA 55 (279)
T ss_dssp ------CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEe-----CCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 345556777773 3333345789999999999987654
No 101
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.12 E-value=67 Score=30.19 Aligned_cols=63 Identities=8% Similarity=0.042 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHHHHHCC-CeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECc
Q 006050 255 TGAPLSMMELATELLSCG-ATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G-~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianS 319 (663)
||+--.-..+++.|++.| ++|.+++ +...-.+++...++.++.... + ..+.. ...+|+|+.+.
T Consensus 30 GatG~iG~~l~~~L~~~G~~~V~~~~--R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 30 GAGGQIARHVINQLADKQTIKQTLFA--RQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp TTTSHHHHHHHHHHTTCTTEEEEEEE--SSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred eCCcHHHHHHHHHHHhCCCceEEEEE--cChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 333345578899999999 8887665 332222233345677664322 1 12222 24678887543
No 102
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=31.07 E-value=81 Score=33.86 Aligned_cols=69 Identities=19% Similarity=0.170 Sum_probs=43.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHh-cCCeEEEeCCCCchhhhhcCccEEEECch
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA-RRKIKVLEDRGEPSFKTSMKADLVIAGSA 320 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~-~~gIkVl~~~~~~sfk~~~k~DLVianSa 320 (663)
.+++|+| ||+. +-...++.|.+.|++|.++... ...-..++. ..+|.++....... ....+|+|++.+.
T Consensus 12 ~~~vlVv------GgG~-va~~k~~~L~~~ga~V~vi~~~-~~~~~~~l~~~~~i~~~~~~~~~~--~l~~~~lVi~at~ 81 (457)
T 1pjq_A 12 DRDCLIV------GGGD-VAERKARLLLEAGARLTVNALT-FIPQFTVWANEGMLTLVEGPFDET--LLDSCWLAIAATD 81 (457)
T ss_dssp TCEEEEE------CCSH-HHHHHHHHHHHTTBEEEEEESS-CCHHHHHHHTTTSCEEEESSCCGG--GGTTCSEEEECCS
T ss_pred CCEEEEE------CCCH-HHHHHHHHHHhCcCEEEEEcCC-CCHHHHHHHhcCCEEEEECCCCcc--ccCCccEEEEcCC
Confidence 5777776 5443 6778889999999999877522 111122332 25688776433222 2347899998764
No 103
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.74 E-value=33 Score=33.74 Aligned_cols=49 Identities=22% Similarity=0.058 Sum_probs=22.8
Q ss_pred cccccCC--ccccccccC-CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 226 RSGTCDR--KGDFARFVW-SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 226 ~~~~c~~--k~~~~~~~~-~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
.+++|+. +--|...|. ..|+++|+ ||+--.-..+|..|++.|+.|.++.
T Consensus 8 ~~~~~~~~~~~~~~~m~~~~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 8 SSGVDLGTENLYFQSMMNQPSPVALIT-----GAGSGIGRATALALAADGVTVGALG 59 (283)
T ss_dssp -------------------CCCEEEEE-----SCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccccccchhhhhhhcCCCCCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3677776 333333332 35677773 3333345789999999999987654
No 104
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=30.65 E-value=1.8e+02 Score=26.93 Aligned_cols=40 Identities=23% Similarity=0.300 Sum_probs=30.7
Q ss_pred CCeEEEEeCCCCCCCHHHHHHH-HHHHHHHCCCeEEEEEEcCC
Q 006050 242 SRKFILIFHELSMTGAPLSMME-LATELLSCGATVSAVVLSKR 283 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smme-LA~~L~s~G~~V~vVvLs~~ 283 (663)
.+||++|..+. +|.-..+.+ ++..|.+.|++|.++-+...
T Consensus 6 mmkilii~~S~--~g~T~~la~~i~~~l~~~g~~v~~~~l~~~ 46 (211)
T 1ydg_A 6 PVKLAIVFYSS--TGTGYAMAQEAAEAGRAAGAEVRLLKVRET 46 (211)
T ss_dssp CCEEEEEECCS--SSHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CCeEEEEEECC--CChHHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 57999998776 777666654 77888889999998877543
No 105
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.42 E-value=53 Score=32.16 Aligned_cols=34 Identities=26% Similarity=0.087 Sum_probs=22.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
...|.++|+ ||+--.-..+|..|.+.|++|.++.
T Consensus 2 l~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~ 35 (264)
T 3tfo_A 2 VMDKVILIT-----GASGGIGEGIARELGVAGAKILLGA 35 (264)
T ss_dssp CTTCEEEES-----STTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEe-----CCccHHHHHHHHHHHHCCCEEEEEE
Confidence 345666762 3332345789999999999987654
No 106
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=30.34 E-value=56 Score=31.06 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=22.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
..|.++|+ ||+--.-..+|..|.+.|++|.++.
T Consensus 3 ~~k~~lVT-----Gas~gIG~~ia~~l~~~G~~V~~~~ 35 (246)
T 3osu_A 3 MTKSALVT-----GASRGIGRSIALQLAEEGYNVAVNY 35 (246)
T ss_dssp CSCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEe
Confidence 44666662 3333345789999999999987654
No 107
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=30.27 E-value=85 Score=31.97 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=29.4
Q ss_pred cccCCCeEEEEeCCCCCCCHHHHHHH-HHHHHHHCCCeEEEEEEcC
Q 006050 238 RFVWSRKFILIFHELSMTGAPLSMME-LATELLSCGATVSAVVLSK 282 (663)
Q Consensus 238 ~~~~~kKILLI~heLs~gGAp~smme-LA~~L~s~G~~V~vVvLs~ 282 (663)
-.|.+||||+|.-.-...+--..+.+ .+..|.+.|++|.++-|..
T Consensus 18 ~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 18 LYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp ----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred chhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 45778999999755554444444444 6678899999999887654
No 108
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=30.22 E-value=91 Score=30.07 Aligned_cols=62 Identities=18% Similarity=0.074 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHCC-CeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECch
Q 006050 259 LSMMELATELLSCG-ATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGSA 320 (663)
Q Consensus 259 ~smmeLA~~L~s~G-~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianSa 320 (663)
..-..++++|.+.| ++|.+++-+....-.+.+...++.++.... + .++.. ...+|.|+.+..
T Consensus 16 ~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 16 AQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred hHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 45567888999889 999876532211112445567888775322 2 22322 345899887643
No 109
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=29.96 E-value=49 Score=35.47 Aligned_cols=64 Identities=22% Similarity=0.273 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECchh
Q 006050 252 LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (663)
Q Consensus 252 Ls~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSav 321 (663)
...+|.-.+-+ |+.|.++|++|+..-. ......++|+..|+++........+ ..+|+|+..+++
T Consensus 18 i~I~G~G~sgl--A~~l~~~G~~V~g~D~-~~~~~~~~L~~~gi~~~~g~~~~~~---~~~d~vV~spgi 81 (469)
T 1j6u_A 18 VGIGGIGMSAV--ALHEFSNGNDVYGSNI-EETERTAYLRKLGIPIFVPHSADNW---YDPDLVIKTPAV 81 (469)
T ss_dssp ETTTSHHHHHH--HHHHHHTTCEEEEECS-SCCHHHHHHHHTTCCEESSCCTTSC---CCCSEEEECTTC
T ss_pred EEEcccCHHHH--HHHHHhCCCEEEEEcC-CCCHHHHHHHhCCCEEECCCCHHHC---CCCCEEEECCCc
Confidence 35688876544 9999999999986432 2223445788899998753211112 368999988764
No 110
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=29.84 E-value=1e+02 Score=29.95 Aligned_cols=67 Identities=6% Similarity=0.007 Sum_probs=45.8
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCC-----------CCcHHHHHHHHcCCCEEEe
Q 006050 587 KVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGE-----------TFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 587 ~~~y~k~~L~~l~~~~gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E-----------~FG~ViiEAMA~GlPVVat 655 (663)
...|... .....+++|. .+..+-..++..+.+..||.+++|- ++ ++--.+-|+...|+|++++
T Consensus 46 ~~~~~~~-~~~al~~lG~--~~~~v~~~~d~~~~l~~ad~I~lpG---G~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~ 119 (229)
T 1fy2_A 46 WDEYTDK-TAEVLAPLGV--NVTGIHRVADPLAAIEKAEIIIVGG---GNTFQLLKESRERGLLAPMADRVKRGALYIGW 119 (229)
T ss_dssp HHHHHHH-HHHHHGGGTC--EEEETTSSSCHHHHHHHCSEEEECC---SCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHH-HHHHHHHCCC--EEEEEeccccHHHHHhcCCEEEECC---CcHHHHHHHHHHCChHHHHHHHHHcCCEEEEE
Confidence 3456665 4444566675 4555544456778899999999998 33 3444677788899999998
Q ss_pred CCCC
Q 006050 656 QKKL 659 (663)
Q Consensus 656 d~~~ 659 (663)
-.|.
T Consensus 120 sAG~ 123 (229)
T 1fy2_A 120 SAGA 123 (229)
T ss_dssp THHH
T ss_pred CHHH
Confidence 7653
No 111
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.45 E-value=63 Score=28.87 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=38.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEE
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKT-SMKADLVIA 317 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVia 317 (663)
.+++|+++ ||.--.-..++++|.+.|++|.++.-+ ...+ +++...++.++.... + .++.. ...+|.|+.
T Consensus 2 ~~~~ilVt------GatG~iG~~l~~~l~~~g~~V~~~~r~-~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 73 (206)
T 1hdo_A 2 AVKKIAIF------GATGQTGLTTLAQAVQAGYEVTVLVRD-SSRL-PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (206)
T ss_dssp CCCEEEEE------STTSHHHHHHHHHHHHTTCEEEEEESC-GGGS-CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEE------cCCcHHHHHHHHHHHHCCCeEEEEEeC-hhhc-ccccCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 34565544 333345678899999999999876532 1112 122234666654322 1 12222 245788876
Q ss_pred Cc
Q 006050 318 GS 319 (663)
Q Consensus 318 nS 319 (663)
+.
T Consensus 74 ~a 75 (206)
T 1hdo_A 74 LL 75 (206)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 112
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=29.38 E-value=1e+02 Score=33.90 Aligned_cols=80 Identities=23% Similarity=0.256 Sum_probs=51.2
Q ss_pred cccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC-Chh---H-Hhc----CCeEEEeCCCCc
Q 006050 234 GDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMP---E-LAR----RKIKVLEDRGEP 304 (663)
Q Consensus 234 ~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg-L~~---e-L~~----~gIkVl~~~~~~ 304 (663)
.|+.....++|+++. |.+..++.|++.|.++|.+|..+....... +.+ + +.. .+..|+......
T Consensus 352 ~d~~~~l~Gkrv~i~-------gd~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~~~d~~ 424 (519)
T 1qgu_B 352 LDSHTWLHGKKFGLY-------GDPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINCDLW 424 (519)
T ss_dssp HHHHHHHTTCEEEEE-------SCHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESCCHH
T ss_pred HHHHHHcCCCEEEEE-------CCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEECCCHH
Confidence 345556678898887 346788999999999999998776554331 111 1 222 256777653322
Q ss_pred hh---hhhcCccEEEECch
Q 006050 305 SF---KTSMKADLVIAGSA 320 (663)
Q Consensus 305 sf---k~~~k~DLVianSa 320 (663)
.+ ....++|+++.++.
T Consensus 425 ~l~~~i~~~~pDLiig~~~ 443 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY 443 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG
T ss_pred HHHHHHhhcCCCEEEECcc
Confidence 22 23457999999874
No 113
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=28.93 E-value=1.4e+02 Score=27.43 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=34.8
Q ss_pred HHHHHHHHHHH-HCCCeEEEEEEcCCCC-ChhHH--hcCCeEEEeCCC-C-chhh-hhcCccEEEECch
Q 006050 259 LSMMELATELL-SCGATVSAVVLSKRGG-LMPEL--ARRKIKVLEDRG-E-PSFK-TSMKADLVIAGSA 320 (663)
Q Consensus 259 ~smmeLA~~L~-s~G~~V~vVvLs~~Gg-L~~eL--~~~gIkVl~~~~-~-~sfk-~~~k~DLVianSa 320 (663)
-.-..+++.|. +.|++|.++. +... -.+++ ...++.++.... + ..+. ....+|+|+.+..
T Consensus 16 ~iG~~~~~~l~~~~g~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 16 QIAQXLTATLLTYTDMHITLYG--RQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEE--SSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred HHHHHHHHHHHhcCCceEEEEe--cCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 34567888999 8999987765 3222 22334 345676664322 1 1222 2346899987653
No 114
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=28.77 E-value=1e+02 Score=30.72 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=30.5
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC
Q 006050 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG 285 (663)
Q Consensus 244 KILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg 285 (663)
|+-+++..-...|--..++++|.+|.+.|+.|.++.+...|.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q~~ 47 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGR 47 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCTTC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCCCC
Confidence 344444454556777788999999999999998887665443
No 115
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=28.70 E-value=1.7e+02 Score=29.55 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=39.5
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
.+.+++.++++..+.. .++..+++. .+|++++.+- ...-.-.+.+|+.+|++|++
T Consensus 44 ~~~~a~~~~~~~~~~~---~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~V~~ 100 (362)
T 1ydw_A 44 AKAFATANNYPESTKI---HGSYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKHILL 100 (362)
T ss_dssp HHHHHHHTTCCTTCEE---ESSHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHhCCCCCCee---eCCHHHHhcCCCCCEEEEcCC--hHHHHHHHHHHHHCCCeEEE
Confidence 5667777776422222 246778887 5899999886 55555677899999999997
No 116
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=28.69 E-value=82 Score=28.82 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=29.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHH-HHHHHHHCCCeEEEEEEcC
Q 006050 242 SRKFILIFHELSMTGAPLSMME-LATELLSCGATVSAVVLSK 282 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smme-LA~~L~s~G~~V~vVvLs~ 282 (663)
.+||++|..+ +|.-..+.+ ++..|.+.|++|.++.+..
T Consensus 4 mmkilii~~S---~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG---YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC---SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC---ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 3689999888 676665554 7777888899999887654
No 117
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=28.46 E-value=55 Score=33.88 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=45.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCC--C---------ChhHHhcCCeEEEeCCCCchhhhhc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--G---------LMPELARRKIKVLEDRGEPSFKTSM 310 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~G--g---------L~~eL~~~gIkVl~~~~~~sfk~~~ 310 (663)
.+++++| ||+ ..-+|+|..|.+.|.+|+++.....- . +.+.+.+.||+++.......+....
T Consensus 146 ~~~vvVI------GgG-~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~ 218 (385)
T 3klj_A 146 KGKAFII------GGG-ILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLI 218 (385)
T ss_dssp HSCEEEE------CCS-HHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHH
T ss_pred CCeEEEE------CCC-HHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEE
Confidence 5788887 333 36789999999999999977432210 0 2234667899988654333323345
Q ss_pred CccEEEECc
Q 006050 311 KADLVIAGS 319 (663)
Q Consensus 311 k~DLVianS 319 (663)
.+|+|+..+
T Consensus 219 ~~D~vv~a~ 227 (385)
T 3klj_A 219 RSSCVITAV 227 (385)
T ss_dssp HHSEEEECC
T ss_pred ecCeEEECc
Confidence 678887643
No 118
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=27.97 E-value=64 Score=31.13 Aligned_cols=34 Identities=15% Similarity=-0.000 Sum_probs=22.5
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vV 278 (663)
|...|.++|+ ||+--.-..+|+.|++.|++|.++
T Consensus 1 M~~~k~vlVT-----Gas~gIG~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 1 MEQNKCALVT-----GSSRGVGKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp --CCCEEEES-----SCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEe-----cCCchHHHHHHHHHHHCCCEEEEE
Confidence 3455677772 333334578999999999998764
No 119
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=27.87 E-value=1.1e+02 Score=29.50 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHCCCeEEEEEEcCCCC-C--------hhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECc
Q 006050 260 SMMELATELLSCGATVSAVVLSKRGG-L--------MPELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 260 smmeLA~~L~s~G~~V~vVvLs~~Gg-L--------~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianS 319 (663)
.-..+++.|.+.|++|.+++ +... . ..++...++.++.... + .++.. ...+|.|+...
T Consensus 16 iG~~l~~~L~~~g~~V~~l~--R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a 85 (308)
T 1qyc_A 16 IGRHVAKASLDLGHPTFLLV--RESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTV 85 (308)
T ss_dssp THHHHHHHHHHTTCCEEEEC--CCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEE--CCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEECC
Confidence 34567888999999987654 3321 1 1234457888775322 1 22322 23588887654
No 120
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=27.44 E-value=92 Score=31.09 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCch-----hhhhcCccEEEECchh
Q 006050 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS-----FKTSMKADLVIAGSAV 321 (663)
Q Consensus 260 smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~s-----fk~~~k~DLVianSav 321 (663)
.-..+|+++..+|++|.++. ++..+.+. ...++.+++...... ......+|++|.+.++
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~--~~~~~~~~-~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLIT--TKRALKPE-PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--CTTSCCCC-CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred HHHHHHHHHHHCCCEEEEEe--CCcccccc-CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCcc
Confidence 45678999999999998765 33333221 123666665432211 1122357777766543
No 121
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=26.90 E-value=20 Score=34.20 Aligned_cols=42 Identities=10% Similarity=0.147 Sum_probs=30.7
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEE-EEEEc
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVS-AVVLS 281 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~-vVvLs 281 (663)
|..+||++|.-+...++--..+.+.+.+....|++|. ++-+.
T Consensus 4 M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~~~idL~ 46 (199)
T 4hs4_A 4 TSPLHFVTLLGSLRKASFNAAVARALPEIAPEGIAITPLGSIG 46 (199)
T ss_dssp -CCEEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEEECCCGG
T ss_pred CCCCEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEEEEEehh
Confidence 4568999999999888877777776555556788887 55443
No 122
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=26.58 E-value=88 Score=30.69 Aligned_cols=41 Identities=27% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK 282 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~ 282 (663)
..|++.|+..-...|--....+||..|++.|..|.++-+..
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 35677776555555777778999999999999998887665
No 123
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.48 E-value=2.2e+02 Score=28.31 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHH--CCCeEEEEEEcCCC-----------CChhHHhcCCeEEEeCCC-C-chhhh--hcCccEEEE
Q 006050 255 TGAPLSMMELATELLS--CGATVSAVVLSKRG-----------GLMPELARRKIKVLEDRG-E-PSFKT--SMKADLVIA 317 (663)
Q Consensus 255 gGAp~smmeLA~~L~s--~G~~V~vVvLs~~G-----------gL~~eL~~~gIkVl~~~~-~-~sfk~--~~k~DLVia 317 (663)
||+--.-..|+..|++ .|++|.++.-.... .-...+...++.++.... + ..+.. ..++|+|+.
T Consensus 17 GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~D~vih 96 (362)
T 3sxp_A 17 GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFH 96 (362)
T ss_dssp TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCCSEEEE
T ss_pred CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCCCEEEE
Confidence 4444456788999999 99999887643220 112233344556554222 2 22322 357899886
Q ss_pred Cc
Q 006050 318 GS 319 (663)
Q Consensus 318 nS 319 (663)
+.
T Consensus 97 ~A 98 (362)
T 3sxp_A 97 QA 98 (362)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 124
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=26.43 E-value=1.4e+02 Score=29.93 Aligned_cols=67 Identities=22% Similarity=0.189 Sum_probs=40.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEe-CCCCc---------hhhhhc-
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE-DRGEP---------SFKTSM- 310 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~-~~~~~---------sfk~~~- 310 (663)
++||.+| ..|+ .-.-+|..|.+.|++|.++. +.. .+.+.+.|+.+.. ..+.. ......
T Consensus 2 ~mkI~Ii-----GaGa--iG~~~a~~L~~~g~~V~~~~--r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~ 70 (320)
T 3i83_A 2 SLNILVI-----GTGA--IGSFYGALLAKTGHCVSVVS--RSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET 70 (320)
T ss_dssp -CEEEEE-----SCCH--HHHHHHHHHHHTTCEEEEEC--STT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS
T ss_pred CCEEEEE-----CcCH--HHHHHHHHHHhCCCeEEEEe--CCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC
Confidence 4688877 3344 33567888999999998764 332 3677777876654 21211 112223
Q ss_pred CccEEEECc
Q 006050 311 KADLVIAGS 319 (663)
Q Consensus 311 k~DLVianS 319 (663)
.+|+|+...
T Consensus 71 ~~DlVilav 79 (320)
T 3i83_A 71 KPDCTLLCI 79 (320)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEEec
Confidence 789998753
No 125
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=26.38 E-value=1.7e+02 Score=27.13 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=41.6
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhh---cCccEEE
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTS---MKADLVI 316 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~---~k~DLVi 316 (663)
|+++||+++..+ +=.+..+......|...|++|.++....+... ....|+.+.++ .++... ..+|+|+
T Consensus 1 mm~~~v~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v---~~~~g~~v~~d---~~l~~~~~~~~~D~li 71 (197)
T 2rk3_A 1 MASKRALVILAK---GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPV---QCSRDVVICPD---ASLEDAKKEGPYDVVV 71 (197)
T ss_dssp -CCCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEETTCSSCE---ECTTSCEECCS---EEHHHHHTTCCCSEEE
T ss_pred CCCCEEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEEcCCCCcc---ccCCCCEEeCC---cCHHHcCCccCCCEEE
Confidence 467888877654 22334456667778889999988763321111 12356665433 334443 6789988
Q ss_pred ECc
Q 006050 317 AGS 319 (663)
Q Consensus 317 anS 319 (663)
.-.
T Consensus 72 vpG 74 (197)
T 2rk3_A 72 LPG 74 (197)
T ss_dssp ECC
T ss_pred ECC
Confidence 643
No 126
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.28 E-value=1.6e+02 Score=28.94 Aligned_cols=46 Identities=11% Similarity=0.088 Sum_probs=34.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChh
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP 288 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~ 288 (663)
+.+++.|+ .-...|--...++||..|++.|..|.+|-+...+.+..
T Consensus 40 ~~~vI~v~-~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~~~ 85 (307)
T 3end_A 40 GAKVFAVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDSTF 85 (307)
T ss_dssp CCEEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTTH
T ss_pred CceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence 46777777 54444666677899999999999999998876555443
No 127
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=26.21 E-value=2.1e+02 Score=28.09 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC---ChhHHhcCCeEEEeCCCCchhhhhcCccEEEECch
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRGG---LMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSA 320 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg---L~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSa 320 (663)
||.--.-..|+..|.+.|++|.++.-...+. +...+...++.++...... .....+|.|+...+
T Consensus 34 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~d~vih~A~ 100 (343)
T 2b69_A 34 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE--PLYIEVDQIYHLAS 100 (343)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS--CCCCCCSEEEECCS
T ss_pred cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCC--hhhcCCCEEEECcc
Confidence 3334456788999999999998765322221 1111123456666432111 11346899876543
No 128
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.17 E-value=86 Score=32.00 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=39.1
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHH--ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysa--ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
.+.+++.++++. ..++..+++.. .|++++.+- ...-.-.+++||.+|++|++
T Consensus 59 a~~~a~~~~~~~------~~~~~~~ll~~~~iD~V~i~tp--~~~h~~~~~~al~~Gk~V~~ 112 (383)
T 3oqb_A 59 VEALAKRFNIAR------WTTDLDAALADKNDTMFFDAAT--TQARPGLLTQAINAGKHVYC 112 (383)
T ss_dssp HHHHHHHTTCCC------EESCHHHHHHCSSCCEEEECSC--SSSSHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHhCCCc------ccCCHHHHhcCCCCCEEEECCC--chHHHHHHHHHHHCCCeEEE
Confidence 566788887751 23688888876 788888775 45555677999999999994
No 129
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=26.16 E-value=1.4e+02 Score=29.44 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhc-CCeEEEeCC-CC-chhhhh---cCccEEEECc
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDR-GE-PSFKTS---MKADLVIAGS 319 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~-~gIkVl~~~-~~-~sfk~~---~k~DLVianS 319 (663)
||+--.-..++.+|.+.|++|.++.-.. ....+.+.. .++.++... .+ .++... .++|+|+.+.
T Consensus 28 GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 28 GICGQIGSHIAELLLERGDKVVGIDNFA-TGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECCS-SCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEECCC-ccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 3334456788999999999998775322 222222222 366665432 22 122222 2489988654
No 130
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=26.15 E-value=1e+02 Score=31.68 Aligned_cols=69 Identities=17% Similarity=0.170 Sum_probs=40.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCC--C---------CChhHHhcCCeEEEeCCCC--chh--
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR--G---------GLMPELARRKIKVLEDRGE--PSF-- 306 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~--G---------gL~~eL~~~gIkVl~~~~~--~sf-- 306 (663)
++||+|+.. +-......+.|.+.||+|.+|+...+ . ...+...+.||+++..... ..+
T Consensus 3 ~mrIvf~Gt-------~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 75 (314)
T 1fmt_A 3 SLRIIFAGT-------PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQ 75 (314)
T ss_dssp CCEEEEEEC-------SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHH
T ss_pred CCEEEEEec-------CHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHH
Confidence 478888732 22333444666677999987764421 1 1334456789999864321 111
Q ss_pred -hhhcCccEEEE
Q 006050 307 -KTSMKADLVIA 317 (663)
Q Consensus 307 -k~~~k~DLVia 317 (663)
-...++|++++
T Consensus 76 ~l~~~~~Dliv~ 87 (314)
T 1fmt_A 76 LVAELQADVMVV 87 (314)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcCCCEEEE
Confidence 23568999976
No 131
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=26.08 E-value=63 Score=27.63 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=26.8
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vV 278 (663)
++..++++|....+...-.+..++..|.+.|+.|.++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~ 39 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERP 39 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEe
Confidence 4567888998764443334568999999999987654
No 132
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=25.27 E-value=1.5e+02 Score=27.30 Aligned_cols=73 Identities=11% Similarity=0.032 Sum_probs=39.0
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCC--eEEEEEEcCCCCChhHHhcCCeEEEeCCC--Cchhhh-hcCccE
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGA--TVSAVVLSKRGGLMPELARRKIKVLEDRG--EPSFKT-SMKADL 314 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~--~V~vVvLs~~GgL~~eL~~~gIkVl~~~~--~~sfk~-~~k~DL 314 (663)
|..+++|+. ||+--.-..++.+|.++|+ +|.++.-+ ...+. ++...++.++.... ...+.. ...+|+
T Consensus 16 m~~~~vlVt------Gasg~iG~~l~~~L~~~G~~~~V~~~~r~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFIL------GASGETGRVLLKEILEQGLFSKVTLIGRR-KLTFD-EEAYKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEE------CTTSHHHHHHHHHHHHHTCCSEEEEEESS-CCCCC-SGGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEE------CCCcHHHHHHHHHHHcCCCCCEEEEEEcC-CCCcc-ccccCCceEEecCcCCHHHHHHHhcCCCE
Confidence 344555443 3333355778999999999 98876532 22222 22223555553221 112222 236899
Q ss_pred EEECch
Q 006050 315 VIAGSA 320 (663)
Q Consensus 315 VianSa 320 (663)
|+.+..
T Consensus 88 vi~~ag 93 (242)
T 2bka_A 88 GFCCLG 93 (242)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 987654
No 133
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=25.20 E-value=1.1e+02 Score=29.20 Aligned_cols=20 Identities=15% Similarity=0.084 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHCCCeEEEEE
Q 006050 260 SMMELATELLSCGATVSAVV 279 (663)
Q Consensus 260 smmeLA~~L~s~G~~V~vVv 279 (663)
.-..+|..|.+.|++|.++.
T Consensus 19 IG~~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 19 IGRAIAERFAVEGADIAIAD 38 (249)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEc
Confidence 45789999999999987664
No 134
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.97 E-value=55 Score=31.92 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=29.1
Q ss_pred CCCeEEEEeCCCCCCCHHH-HHHHHHHHHHHCCCeEEEEEEcCCC
Q 006050 241 WSRKFILIFHELSMTGAPL-SMMELATELLSCGATVSAVVLSKRG 284 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~-smmeLA~~L~s~G~~V~vVvLs~~G 284 (663)
.++||++.+.. ++|.. ...+|++.|.+.|++|++|. ++..
T Consensus 6 ~~k~I~lgiTG---s~aa~~k~~~ll~~L~~~g~eV~vv~-T~~A 46 (201)
T 3lqk_A 6 AGKHVGFGLTG---SHCTYHEVLPQMERLVELGAKVTPFV-THTV 46 (201)
T ss_dssp TTCEEEEECCS---CGGGGGGTHHHHHHHHHTTCEEEEEC-SSCS
T ss_pred CCCEEEEEEEC---hHHHHHHHHHHHHHHhhCCCEEEEEE-ChhH
Confidence 46788888433 34444 67899999999999999764 5543
No 135
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=24.90 E-value=90 Score=32.31 Aligned_cols=70 Identities=21% Similarity=0.288 Sum_probs=41.7
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCC--C---------ChhHHhcCCeEEEeCCCCc--h---
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--G---------LMPELARRKIKVLEDRGEP--S--- 305 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~G--g---------L~~eL~~~gIkVl~~~~~~--s--- 305 (663)
++||+|+ |.|-..+...+.|.+.||+|.+|+...+. | +.+...+.||+|+...... .
T Consensus 4 mmrIvf~-------Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~ 76 (317)
T 3rfo_A 4 MIKVVFM-------GTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYE 76 (317)
T ss_dssp TSEEEEE-------CCSTTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHH
T ss_pred ceEEEEE-------eCCHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHH
Confidence 4789888 22223334456777789999887744321 1 2334566899998543211 1
Q ss_pred hhhhcCccEEEEC
Q 006050 306 FKTSMKADLVIAG 318 (663)
Q Consensus 306 fk~~~k~DLVian 318 (663)
.-...++|++++-
T Consensus 77 ~l~~~~~Dliv~~ 89 (317)
T 3rfo_A 77 KVLALEPDLIVTA 89 (317)
T ss_dssp HHHHHCCSEEEES
T ss_pred HHHhcCCCEEEEc
Confidence 1235689999864
No 136
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=24.88 E-value=2e+02 Score=27.64 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeC-CCCchhhhhcCccEEEECc
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED-RGEPSFKTSMKADLVIAGS 319 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~-~~~~sfk~~~k~DLVianS 319 (663)
||+--.-..|+.+|.++|++|.++. +...-..++...++.++.. -.+..+....+.|+|+...
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~--r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~d~vih~A 70 (312)
T 3ko8_A 7 GGAGFIGSHLVDKLVELGYEVVVVD--NLSSGRREFVNPSAELHVRDLKDYSWGAGIKGDVVFHFA 70 (312)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEC--CCSSCCGGGSCTTSEEECCCTTSTTTTTTCCCSEEEECC
T ss_pred CCCChHHHHHHHHHHhCCCEEEEEe--CCCCCchhhcCCCceEEECccccHHHHhhcCCCEEEECC
Confidence 3334456789999999999987664 3222223333456666532 1222233333348887654
No 137
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=24.76 E-value=54 Score=28.55 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEcCCcchHHHHHHHccEEEEcCC
Q 006050 590 YVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQ 632 (663)
Q Consensus 590 y~k~~L~~l~~~~gLs~~V~~~G~~~dv~~lysaADV~V~pS~ 632 (663)
.+-+.++..++..|++-.|.-.+ ..++.+.+..+|++++..+
T Consensus 18 ~l~~k~~~~~~~~gi~~~i~a~~-~~~~~~~~~~~Dvil~~pq 59 (106)
T 1e2b_A 18 LLVSKMRAQAEKYEVPVIIEAFP-ETLAGEKGQNADVVLLGPQ 59 (106)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEEC-SSSTTHHHHHCSEEEECTT
T ss_pred HHHHHHHHHHHHCCCCeEEEEec-HHHHHhhccCCCEEEEccc
Confidence 45556899999999975544433 3456667889999999987
No 138
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=24.50 E-value=1.7e+02 Score=28.68 Aligned_cols=50 Identities=12% Similarity=0.093 Sum_probs=29.6
Q ss_pred ccccccccCCCeEEEEeCCCCC----CCHHHHHHH-HHHHHHHCCCeEEEEEEcC
Q 006050 233 KGDFARFVWSRKFILIFHELSM----TGAPLSMME-LATELLSCGATVSAVVLSK 282 (663)
Q Consensus 233 k~~~~~~~~~kKILLI~heLs~----gGAp~smme-LA~~L~s~G~~V~vVvLs~ 282 (663)
|.-|-.....+|||+|.-.... ++.-..+++ ++..|.+.|++|.++-+..
T Consensus 16 ~~~~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~~ 70 (218)
T 3rpe_A 16 ENLYFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQ 70 (218)
T ss_dssp ---C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred cccccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECCC
Confidence 3444444445789999866643 344455655 5566778999999887653
No 139
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=24.43 E-value=45 Score=31.88 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=27.5
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCC
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG 284 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~G 284 (663)
+.+||++.+..- .|+ ....++++.|.+.|++|.++. ++..
T Consensus 4 m~k~IllgvTGs--~aa-~k~~~ll~~L~~~g~~V~vv~-T~~A 43 (175)
T 3qjg_A 4 MGENVLICLCGS--VNS-INISHYIIELKSKFDEVNVIA-STNG 43 (175)
T ss_dssp -CCEEEEEECSS--GGG-GGHHHHHHHHTTTCSEEEEEE-CTGG
T ss_pred CCCEEEEEEeCH--HHH-HHHHHHHHHHHHCCCEEEEEE-CcCH
Confidence 357888874331 233 347899999999999999765 5543
No 140
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=24.42 E-value=79 Score=31.21 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=29.5
Q ss_pred cCCCeEEEEeCCCC--------CCCHHH-HHHHHHHHHHHCCCeEEEEEEc
Q 006050 240 VWSRKFILIFHELS--------MTGAPL-SMMELATELLSCGATVSAVVLS 281 (663)
Q Consensus 240 ~~~kKILLI~heLs--------~gGAp~-smmeLA~~L~s~G~~V~vVvLs 281 (663)
|.++|||+|..+.. .+|-+. -++.-...|.+.|++|.+++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44679999987642 156654 3666777889999999988743
No 141
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=24.39 E-value=1.9e+02 Score=29.73 Aligned_cols=52 Identities=13% Similarity=0.161 Sum_probs=38.7
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHH--ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysa--ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+.+++.+|++ ..+++.+++.. .|++++.+- ...---.+++|+.+|++|++-
T Consensus 41 ~~~~a~~~g~~-------~~~~~~ell~~~~vD~V~i~tp--~~~H~~~~~~al~aGk~Vl~E 94 (387)
T 3moi_A 41 RERFGKEYGIP-------VFATLAEMMQHVQMDAVYIASP--HQFHCEHVVQASEQGLHIIVE 94 (387)
T ss_dssp HHHHHHHHTCC-------EESSHHHHHHHSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCC-------eECCHHHHHcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCceeee
Confidence 45566666653 23578888886 899999886 555555778999999999863
No 142
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.27 E-value=1.3e+02 Score=27.57 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=30.3
Q ss_pred CCeEEEEeCCCCCC-CHHHHHHHHHHHHHHCCCeE-EEEE
Q 006050 242 SRKFILIFHELSMT-GAPLSMMELATELLSCGATV-SAVV 279 (663)
Q Consensus 242 ~kKILLI~heLs~g-GAp~smmeLA~~L~s~G~~V-~vVv 279 (663)
++||++++..--.+ -.....+++|..+.+.|++| .++.
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf 51 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFF 51 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEE
Confidence 68999998887654 34456799999999999999 6654
No 143
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.23 E-value=1.4e+02 Score=26.23 Aligned_cols=41 Identities=24% Similarity=0.252 Sum_probs=29.3
Q ss_pred CeEEEEeCCCCCC-CHHHHHHHHHHHHHHCCCeE-EEEEEcCCC
Q 006050 243 RKFILIFHELSMT-GAPLSMMELATELLSCGATV-SAVVLSKRG 284 (663)
Q Consensus 243 kKILLI~heLs~g-GAp~smmeLA~~L~s~G~~V-~vVvLs~~G 284 (663)
||+++|+..-..+ -.-...+.+|..+.+.||+| .++. ..+|
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff-~~dG 43 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFF-YHDG 43 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEE-CGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEE-echH
Confidence 4788887765543 34456799999999999999 6554 4333
No 144
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=24.00 E-value=1.2e+02 Score=30.80 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=24.9
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs 281 (663)
.++||+| ||+ .+....+..|.+.|+.|.++...
T Consensus 13 ~k~VLVV------GgG-~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLI------GGG-EVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEE------EES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEE------CCc-HHHHHHHHHHHhCCCEEEEEcCC
Confidence 4666666 444 46788889999999999988644
No 145
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=23.98 E-value=89 Score=32.74 Aligned_cols=54 Identities=9% Similarity=0.061 Sum_probs=40.5
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHH-------ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA-------ADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysa-------ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
.+.+++++|++.. ...++..+++.. .|++++.+- ...-.-.+++|+.+|++|++
T Consensus 79 a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~ 139 (417)
T 3v5n_A 79 AEASGRELGLDPS----RVYSDFKEMAIREAKLKNGIEAVAIVTP--NHVHYAAAKEFLKRGIHVIC 139 (417)
T ss_dssp HHHHHHHHTCCGG----GBCSCHHHHHHHHHHCTTCCSEEEECSC--TTSHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCcc----cccCCHHHHHhcccccCCCCcEEEECCC--cHHHHHHHHHHHhCCCeEEE
Confidence 5667787877531 123578888887 899888886 55555677999999999986
No 146
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=23.94 E-value=1.5e+02 Score=32.73 Aligned_cols=80 Identities=21% Similarity=0.241 Sum_probs=49.8
Q ss_pred cccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC-----ChhHHhc----CCeEEEeCCCCc
Q 006050 234 GDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-----LMPELAR----RKIKVLEDRGEP 304 (663)
Q Consensus 234 ~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg-----L~~eL~~----~gIkVl~~~~~~ 304 (663)
.|+.....++|+.+. |.+.....|++.|.++|.+|..+....... +.+.+.. .+..|+......
T Consensus 356 ~d~~~~l~GKrvaI~-------gd~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~ 428 (523)
T 3u7q_B 356 TDSHTWLHGKRFALW-------GDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLW 428 (523)
T ss_dssp HHHHHHHTTCEEEEE-------CSHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHH
T ss_pred HHHHHhcCCCEEEEE-------CCchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHH
Confidence 344455678898876 456677899999999999998776543221 1122222 145666543222
Q ss_pred hh---hhhcCccEEEECch
Q 006050 305 SF---KTSMKADLVIAGSA 320 (663)
Q Consensus 305 sf---k~~~k~DLVianSa 320 (663)
.+ -...++|+++.++.
T Consensus 429 ~l~~~i~~~~pDLlig~s~ 447 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY 447 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHhcCCCEEEECcc
Confidence 22 23468999999974
No 147
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=23.72 E-value=96 Score=32.10 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=40.5
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHH-------ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA-------ADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysa-------ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
.+.+++++|++.. ...++..+++.. .|++++.+- ...-.-.+++|+.+|++|++
T Consensus 54 a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~i~tp--~~~H~~~~~~al~aGkhVl~ 114 (398)
T 3dty_A 54 GSAFGEQLGVDSE----RCYADYLSMFEQEARRADGIQAVSIATP--NGTHYSITKAALEAGLHVVC 114 (398)
T ss_dssp HHHHHHHTTCCGG----GBCSSHHHHHHHHTTCTTCCSEEEEESC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCcc----eeeCCHHHHHhcccccCCCCCEEEECCC--cHHHHHHHHHHHHCCCeEEE
Confidence 6677888887531 123588888887 898888876 44555677999999999997
No 148
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=23.69 E-value=1.1e+02 Score=29.20 Aligned_cols=20 Identities=20% Similarity=0.135 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHCCCeEEEEE
Q 006050 260 SMMELATELLSCGATVSAVV 279 (663)
Q Consensus 260 smmeLA~~L~s~G~~V~vVv 279 (663)
.-..+|..|++.|++|.++.
T Consensus 16 iG~~ia~~l~~~G~~V~~~~ 35 (255)
T 2q2v_A 16 IGLGIAQVLARAGANIVLNG 35 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 45789999999999987653
No 149
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=23.66 E-value=73 Score=30.84 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=38.1
Q ss_pred ccccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhhh-
Q 006050 233 KGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKTS- 309 (663)
Q Consensus 233 k~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~~- 309 (663)
..+|..+-.+++||+. ||+--.-..++.+|.+.|++|.++.-.... ..+ ++.++.... + ..+...
T Consensus 3 ~~~~~~~~~~~~vlVT------GatG~iG~~l~~~L~~~G~~V~~~~r~~~~---~~l---~~~~~~~Dl~d~~~~~~~~ 70 (321)
T 2pk3_A 3 GSHHHHHHGSMRALIT------GVAGFVGKYLANHLTEQNVEVFGTSRNNEA---KLP---NVEMISLDIMDSQRVKKVI 70 (321)
T ss_dssp ----------CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESCTTC---CCT---TEEEEECCTTCHHHHHHHH
T ss_pred CcccccccCcceEEEE------CCCChHHHHHHHHHHHCCCEEEEEecCCcc---ccc---eeeEEECCCCCHHHHHHHH
Confidence 3456666566776654 444445678899999999999876533222 112 666654221 1 222222
Q ss_pred --cCccEEEECch
Q 006050 310 --MKADLVIAGSA 320 (663)
Q Consensus 310 --~k~DLVianSa 320 (663)
.++|.|+.+.+
T Consensus 71 ~~~~~d~vih~A~ 83 (321)
T 2pk3_A 71 SDIKPDYIFHLAA 83 (321)
T ss_dssp HHHCCSEEEECCS
T ss_pred HhcCCCEEEEcCc
Confidence 34899886543
No 150
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=23.55 E-value=1.6e+02 Score=28.56 Aligned_cols=64 Identities=16% Similarity=0.101 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhhh---cCccEEEECch
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKTS---MKADLVIAGSA 320 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~~---~k~DLVianSa 320 (663)
||+--.-..++.+|.+.|++|.++.-.. ....+.+. .++.++.... + .++... ..+|.|+...+
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 8 GGAGYIGSHAVKKLVDEGLSVVVVDNLQ-TGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECCS-SCCGGGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCCC-cCchhhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 3333456788999999999998765322 22223332 2666654321 1 223222 26898876543
No 151
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.47 E-value=1.2e+02 Score=29.43 Aligned_cols=59 Identities=14% Similarity=0.082 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHCCCeEEEEEEcCCCCCh---hHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECc
Q 006050 260 SMMELATELLSCGATVSAVVLSKRGGLM---PELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 260 smmeLA~~L~s~G~~V~vVvLs~~GgL~---~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianS 319 (663)
.-..++++|++.|++|.+++-... ... .++...++.++.... + .++.. ...+|.|+...
T Consensus 23 iG~~l~~~L~~~g~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 23 IGNHMVKGSLKLGHPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp THHHHHHHHHHTTCCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHCCCcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 345678889999999987653221 222 234567888775322 1 22322 24689888654
No 152
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=23.34 E-value=77 Score=28.37 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEE
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvL 280 (663)
..+|+++|... |....+..++..|.++|+.|.++-+
T Consensus 32 ~p~vv~~HG~~--g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIF--GVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTT--CSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcC--ccCHHHHHHHHHHHHCCcEEEEecc
Confidence 56899999843 4445678899999999999876543
No 153
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=23.31 E-value=93 Score=28.25 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=29.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEc
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs 281 (663)
+.+|+++|....+.....+..++..|.+.|+.|.++-+.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 568889999765433455778999999999998766543
No 154
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=23.12 E-value=1.7e+02 Score=27.41 Aligned_cols=65 Identities=18% Similarity=0.241 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEcCCcc----------hHHHHHHHccEEEEcC---CCCCCCCcHHHHH---HHHcCCC
Q 006050 588 VPYVKEILEFLSQHSNLSKAMLWTPATT----------RVASLYSAADVYVINS---QGLGETFGRVTIE---AMAFGVP 651 (663)
Q Consensus 588 ~~y~k~~L~~l~~~~gLs~~V~~~G~~~----------dv~~lysaADV~V~pS---~~~~E~FG~ViiE---AMA~GlP 651 (663)
..+.++ +..+.+..|+. |.+ |... .=...+..||++|..- ++ .+.=.-+..| |.|.|+|
T Consensus 26 ~~~~~~-l~~~l~~~G~~--v~~-P~~~~~~~~~~i~~~d~~~i~~aD~vVA~ldpf~g-~~~D~GTafEiGyA~AlgKP 100 (161)
T 2f62_A 26 ASYYNK-VRELLKKENVM--PLI-PTDNEATEALDIRQKNIQMIKDCDAVIADLSPFRG-HEPDCGTAFEVGCAAALNKM 100 (161)
T ss_dssp HHHHHH-HHHHHHTTTCE--EEC-TTTTCCSSHHHHHHHHHHHHHHCSEEEEECCCCSS-SSCCHHHHHHHHHHHHTTCE
T ss_pred HHHHHH-HHHHHHHCCCE--EEC-CCccCcchHHHHHHHHHHHHHhCCEEEEEecCCCC-CCCCCcHHHHHHHHHHCCCE
Confidence 555555 67777777763 444 4431 1257899999887762 22 2344446666 6788999
Q ss_pred EEEeCC
Q 006050 652 MLEAQK 657 (663)
Q Consensus 652 VVatd~ 657 (663)
||+...
T Consensus 101 Vi~l~~ 106 (161)
T 2f62_A 101 VLTFTS 106 (161)
T ss_dssp EEEECS
T ss_pred EEEEEc
Confidence 999653
No 155
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=23.08 E-value=2.5e+02 Score=25.74 Aligned_cols=70 Identities=21% Similarity=0.297 Sum_probs=42.2
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhh--hcCccEEEEC
Q 006050 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKT--SMKADLVIAG 318 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~--~~k~DLVian 318 (663)
+++||+++..+ +=.+..+......|...|++|.++....++... ...|+++..+. .+.. ...+|+|+.-
T Consensus 4 m~kkv~ill~~---g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~---~~~g~~i~~d~---~l~~~~~~~~D~livp 74 (190)
T 4e08_A 4 MSKSALVILAP---GAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVK---CSRDVQILPDT---SLAQVASDKFDVVVLP 74 (190)
T ss_dssp CCCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEE---CTTSCEEECSE---ETGGGTTCCCSEEEEC
T ss_pred CCcEEEEEECC---CchHHHHHHHHHHHHHCCCEEEEEECCCCccee---cCCCcEEECCC---CHHHCCcccCCEEEEC
Confidence 45788887663 223344566667888899999988754322222 24677776543 2222 2368998864
Q ss_pred c
Q 006050 319 S 319 (663)
Q Consensus 319 S 319 (663)
.
T Consensus 75 G 75 (190)
T 4e08_A 75 G 75 (190)
T ss_dssp C
T ss_pred C
Confidence 3
No 156
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.87 E-value=94 Score=29.33 Aligned_cols=33 Identities=18% Similarity=0.020 Sum_probs=22.5
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
..|+++|+ ||+--.-..+|++|.+.|++|.++.
T Consensus 8 ~~k~vlIT-----Gas~giG~~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 8 ENKVGIVT-----GSGGGIGQAYAEALAREGAAVVVAD 40 (253)
T ss_dssp TTCEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEc
Confidence 34566663 3333345789999999999987654
No 157
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=22.86 E-value=1.3e+02 Score=29.97 Aligned_cols=67 Identities=22% Similarity=0.281 Sum_probs=39.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCc---------hhhhhcCc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP---------SFKTSMKA 312 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~---------sfk~~~k~ 312 (663)
++||.+| ..|+ .-.-+|..|.+.|++|.++. +.. .+.+.+.|+.+....+.. .......+
T Consensus 2 ~mkI~Ii-----GaGa--iG~~~a~~L~~~g~~V~~~~--r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 70 (312)
T 3hn2_A 2 SLRIAIV-----GAGA--LGLYYGALLQRSGEDVHFLL--RRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPM 70 (312)
T ss_dssp --CEEEE-----CCST--THHHHHHHHHHTSCCEEEEC--STT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCC
T ss_pred CCEEEEE-----CcCH--HHHHHHHHHHHCCCeEEEEE--cCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCC
Confidence 4677776 2233 22346788888999988654 333 477778888765432211 11223578
Q ss_pred cEEEECc
Q 006050 313 DLVIAGS 319 (663)
Q Consensus 313 DLVianS 319 (663)
|+|+...
T Consensus 71 D~vilav 77 (312)
T 3hn2_A 71 DLVLVGL 77 (312)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9998753
No 158
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=22.81 E-value=1.7e+02 Score=24.46 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=38.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhc-CCeEEEeCC-CCch-hhh--hcCccEEEE
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDR-GEPS-FKT--SMKADLVIA 317 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~-~gIkVl~~~-~~~s-fk~--~~k~DLVia 317 (663)
++|+++ | +-..-..+|..|.+.|++|.++. +.....+.+.. .++.++... .... +.. ..++|+|+.
T Consensus 5 m~i~Ii------G-~G~iG~~~a~~L~~~g~~v~~~d--~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIA------G-IGRVGYTLAKSLSEKGHDIVLID--IDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEE------C-CSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEE------C-CCHHHHHHHHHHHhCCCeEEEEE--CCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 567666 2 22244568889999999987664 32222334443 477665432 2211 211 347899987
Q ss_pred Cc
Q 006050 318 GS 319 (663)
Q Consensus 318 nS 319 (663)
.+
T Consensus 76 ~~ 77 (140)
T 1lss_A 76 VT 77 (140)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 159
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=22.81 E-value=2.6e+02 Score=27.05 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=38.1
Q ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCC--CeEEEEEEcCCCCChhHHh----cCCeEEEeCC-CC-chhhh-hc
Q 006050 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCG--ATVSAVVLSKRGGLMPELA----RRKIKVLEDR-GE-PSFKT-SM 310 (663)
Q Consensus 240 ~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G--~~V~vVvLs~~GgL~~eL~----~~gIkVl~~~-~~-~sfk~-~~ 310 (663)
|.+|+||+. ||+--.-..++.+|.+.| ++|.++.-....+-.+.+. ..++.++... .+ ..+.. ..
T Consensus 1 M~~m~vlVT------GatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 74 (336)
T 2hun_A 1 MHSMKLLVT------GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR 74 (336)
T ss_dssp --CCEEEEE------TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCeEEEE------CCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh
Confidence 445675543 333345577889999887 8887664322111112221 2356665432 11 12222 24
Q ss_pred CccEEEECch
Q 006050 311 KADLVIAGSA 320 (663)
Q Consensus 311 k~DLVianSa 320 (663)
.+|+|+.+.+
T Consensus 75 ~~d~vih~A~ 84 (336)
T 2hun_A 75 KVDGVVHLAA 84 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899886543
No 160
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.76 E-value=73 Score=34.40 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=44.3
Q ss_pred ccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeC-CCC-chhhhhcCccE
Q 006050 237 ARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED-RGE-PSFKTSMKADL 314 (663)
Q Consensus 237 ~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~-~~~-~sfk~~~k~DL 314 (663)
.....++|+.+. +| +...+.+++.|.++|.+|..+..........+..... |+.. ... ..+-...++|+
T Consensus 308 ~~~l~Gkrv~i~------~~-~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~--v~~~D~~~le~~i~~~~pDl 378 (458)
T 3pdi_B 308 HFMLSSARTAIA------AD-PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPS--VRVGDLEDLEHAARAGQAQL 378 (458)
T ss_dssp HHHHTTCEEEEE------CC-HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSC--EEESHHHHHHHHHHHHTCSE
T ss_pred HHhcCCCEEEEE------CC-cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCc--EEeCCHHHHHHHHHhcCCCE
Confidence 344567888875 33 4567889999999999998777654332222111112 3321 111 11223468999
Q ss_pred EEECch
Q 006050 315 VIAGSA 320 (663)
Q Consensus 315 VianSa 320 (663)
++.++.
T Consensus 379 lig~~~ 384 (458)
T 3pdi_B 379 VIGNSH 384 (458)
T ss_dssp EEECTT
T ss_pred EEEChh
Confidence 999874
No 161
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=22.74 E-value=1.1e+02 Score=28.29 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHH-HHHH-HHHCCCeEEEEEEcC
Q 006050 243 RKFILIFHELSMTGAPLSMME-LATE-LLSCGATVSAVVLSK 282 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smme-LA~~-L~s~G~~V~vVvLs~ 282 (663)
+||++|..+...+|.-..+.+ ++.. |.+.|++|.++-+..
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~ 44 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVID 44 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGG
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 689999988877887777766 6677 888899998877643
No 162
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=22.62 E-value=1.2e+02 Score=26.41 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=27.4
Q ss_pred CeEEEEeCCCCCCCHHHHH-HHHHHHHHHCCCeEEEEEEc
Q 006050 243 RKFILIFHELSMTGAPLSM-MELATELLSCGATVSAVVLS 281 (663)
Q Consensus 243 kKILLI~heLs~gGAp~sm-meLA~~L~s~G~~V~vVvLs 281 (663)
+|++++..+ ++|.-..+ -.++..|.+.|++|.++-+.
T Consensus 2 ~ki~I~y~S--~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS--STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC--SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC--CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 578888766 46766555 45889999999998877543
No 163
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=22.44 E-value=54 Score=32.19 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCCCCCCHHHH-HHHHHHHHHHCCCeEEEEEEcCCC
Q 006050 241 WSRKFILIFHELSMTGAPLS-MMELATELLSCGATVSAVVLSKRG 284 (663)
Q Consensus 241 ~~kKILLI~heLs~gGAp~s-mmeLA~~L~s~G~~V~vVvLs~~G 284 (663)
.++||++.+.. ++|..- ..+|++.|.+.|++|.+|. ++..
T Consensus 4 ~~k~IllgiTG---siaayk~~~~ll~~L~~~g~eV~vv~-T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTG---SHCTYEEVMPHLEKLIAEGAEVRPVV-SYTV 44 (207)
T ss_dssp TTCEEEEEECS---CGGGGTTSHHHHHHHHHTTCEEEEEE-CC--
T ss_pred CCCEEEEEEEC---hHHHHHHHHHHHHHHHhCCCEEEEEE-ehHH
Confidence 45789888554 344443 7899999999999999765 5443
No 164
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=22.38 E-value=83 Score=31.08 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=39.1
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHHHccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lysaADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+.+++.+|.+. .++..+++...|++++.+- ...-.-.+.+|+.+|++|++-
T Consensus 45 ~~~~a~~~~~~~-------~~~~~~ll~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl~E 96 (308)
T 3uuw_A 45 REKICSDYRIMP-------FDSIESLAKKCDCIFLHSS--TETHYEIIKILLNLGVHVYVD 96 (308)
T ss_dssp HHHHHHHHTCCB-------CSCHHHHHTTCSEEEECCC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCC-------cCCHHHHHhcCCEEEEeCC--cHhHHHHHHHHHHCCCcEEEc
Confidence 566777777641 3567777779999998886 555566778999999999863
No 165
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=22.33 E-value=1.4e+02 Score=30.59 Aligned_cols=56 Identities=20% Similarity=0.226 Sum_probs=33.5
Q ss_pred HHHHHHHHHCCCeEEEEEEcCCC--------CChhHHhcCCeEEEeCCCC--ch---hhhhcCccEEEE
Q 006050 262 MELATELLSCGATVSAVVLSKRG--------GLMPELARRKIKVLEDRGE--PS---FKTSMKADLVIA 317 (663)
Q Consensus 262 meLA~~L~s~G~~V~vVvLs~~G--------gL~~eL~~~gIkVl~~~~~--~s---fk~~~k~DLVia 317 (663)
....+.|.+.||+|.+|+..++. ...+...+.||+++..... .. .-...++|++++
T Consensus 13 ~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~ 81 (305)
T 2bln_A 13 CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFS 81 (305)
T ss_dssp HHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHhcCCCEEEE
Confidence 34446677779999877644322 1344456689998854321 11 123568999975
No 166
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=22.25 E-value=73 Score=29.80 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=29.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs 281 (663)
.+||++|.-+..-+|.-..+.+.+.+..+.|++|.++-+.
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~~~~~v~~~dl~ 41 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYD 41 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCS
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCc
Confidence 3689999988887787777776544444579998877664
No 167
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=22.12 E-value=1.7e+02 Score=28.87 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=42.8
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC--CCeEEEEEEcCCCC-ChhHHhcCCeEEEeCCC-C--------ch---h
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGG-LMPELARRKIKVLEDRG-E--------PS---F 306 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~--G~~V~vVvLs~~Gg-L~~eL~~~gIkVl~~~~-~--------~s---f 306 (663)
++||++++ |.+| ..+..+...|.+. +++|.+|+..++.. ..+...+.||+++.... . .. .
T Consensus 22 ~~rI~~l~---SG~g--~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLI---SGSG--TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEE---SSCC--HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHH
T ss_pred CcEEEEEE---eCCc--HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHH
Confidence 46888873 2233 3566677777766 67887776554332 23456678999974221 1 11 1
Q ss_pred hhhcCccEEEEC
Q 006050 307 KTSMKADLVIAG 318 (663)
Q Consensus 307 k~~~k~DLVian 318 (663)
-...++|+|+.-
T Consensus 97 l~~~~~Dliv~a 108 (229)
T 3auf_A 97 LQAYGVDLVCLA 108 (229)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhcCCCEEEEc
Confidence 134689999864
No 168
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=21.88 E-value=38 Score=33.12 Aligned_cols=47 Identities=19% Similarity=0.184 Sum_probs=26.9
Q ss_pred ccccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHH-CCCeEEEEEEcCC
Q 006050 233 KGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLS-CGATVSAVVLSKR 283 (663)
Q Consensus 233 k~~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s-~G~~V~vVvLs~~ 283 (663)
.+++..-+.++||++.+.. +.|-....+|++.|.+ .|++|.+|. ++.
T Consensus 10 ~~~~~~~l~~k~IllgvTG---siaa~k~~~lv~~L~~~~g~~V~vv~-T~~ 57 (206)
T 1qzu_A 10 PAAAPLMERKFHVLVGVTG---SVAALKLPLLVSKLLDIPGLEVAVVT-TER 57 (206)
T ss_dssp ------CCSSEEEEEEECS---SGGGGTHHHHHHHHC---CEEEEEEE-CTG
T ss_pred chhhhcccCCCEEEEEEeC---hHHHHHHHHHHHHHhcccCCEEEEEE-CHh
Confidence 3444444566888888543 2223345899999998 899999775 544
No 169
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.87 E-value=76 Score=27.63 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=21.5
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vV 278 (663)
..|++| ||+| .-+.+|..|++.|++|.++
T Consensus 3 ~dV~II------GaGp-aGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 3 VPIAII------GTGI-AGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEEE------CCSH-HHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEE------CcCH-HHHHHHHHHHHCCCCEEEE
Confidence 456666 4444 5688899999999998765
No 170
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=21.77 E-value=1.7e+02 Score=27.43 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=32.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcC
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK 282 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~ 282 (663)
.|++.|+..-...|.-...++||..|.++|+.|.++-+..
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3677776665566888888999999999999998887664
No 171
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=21.76 E-value=1.8e+02 Score=29.38 Aligned_cols=60 Identities=23% Similarity=0.210 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHCCCeEEEEEEcCCCCC-hhHHhc-CCeEEEeCC-C-C-chhhh-hcCccEEEECc
Q 006050 259 LSMMELATELLSCGATVSAVVLSKRGGL-MPELAR-RKIKVLEDR-G-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 259 ~smmeLA~~L~s~G~~V~vVvLs~~GgL-~~eL~~-~gIkVl~~~-~-~-~sfk~-~~k~DLVianS 319 (663)
..--.+++.|.+.|++|.+++-+ .... .+++.. .++.++... . + .++.. ...+|.|+.+.
T Consensus 16 ~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a 81 (352)
T 1xgk_A 16 RQGASLIRVAAAVGHHVRAQVHS-LKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT 81 (352)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESC-SCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEEECC-CChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcC
Confidence 34567888999999999876522 2222 134443 377776533 2 2 22332 34689888654
No 172
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=21.64 E-value=2.2e+02 Score=28.60 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHHHHHCC-CeEEEEEEcCCCCChhHHh-cCCeEEEeCCC-C-chhhh-hcCccEEEECch
Q 006050 255 TGAPLSMMELATELLSCG-ATVSAVVLSKRGGLMPELA-RRKIKVLEDRG-E-PSFKT-SMKADLVIAGSA 320 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G-~~V~vVvLs~~GgL~~eL~-~~gIkVl~~~~-~-~sfk~-~~k~DLVianSa 320 (663)
||+--.-..|+.+|.+.| ++|.+++-.. ....+.+. ..++.++.... + ..+.. ...+|.|+...+
T Consensus 39 GatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 39 GGAGFVGSNLVKRLLELGVNQVHVVDNLL-SAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp TTTSHHHHHHHHHHHHTTCSEEEEECCCT-TCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred CCccHHHHHHHHHHHHcCCceEEEEECCC-CCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 433445678899999999 9998764221 22222232 34676664321 1 12322 237899986543
No 173
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=21.64 E-value=1.2e+02 Score=29.90 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=22.4
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
..|.++|+ ||+--.-..+|+.|.+.|++|.++.
T Consensus 48 ~~k~vlVT-----Gas~GIG~aia~~la~~G~~V~~~~ 80 (294)
T 3r3s_A 48 KDRKALVT-----GGDSGIGRAAAIAYAREGADVAINY 80 (294)
T ss_dssp TTCEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEe-----CCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 44666663 3333345789999999999987653
No 174
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=21.57 E-value=2e+02 Score=27.99 Aligned_cols=73 Identities=18% Similarity=0.087 Sum_probs=38.9
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHh----cCCeEEEeCCC-C-chhhhh---cCc
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA----RRKIKVLEDRG-E-PSFKTS---MKA 312 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~----~~gIkVl~~~~-~-~sfk~~---~k~ 312 (663)
.++||+. ||+--.-..++.+|.+.|++|.+++-.........+. ..++.++.... + .++... .++
T Consensus 14 ~~~vlVT------GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (335)
T 1rpn_A 14 TRSALVT------GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQP 87 (335)
T ss_dssp -CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCeEEEE------CCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCC
Confidence 4566544 4444456789999999999998776332221111121 23566654321 1 222222 257
Q ss_pred cEEEECch
Q 006050 313 DLVIAGSA 320 (663)
Q Consensus 313 DLVianSa 320 (663)
|+|+...+
T Consensus 88 d~Vih~A~ 95 (335)
T 1rpn_A 88 QEVYNLAA 95 (335)
T ss_dssp SEEEECCS
T ss_pred CEEEECcc
Confidence 98876543
No 175
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=21.53 E-value=85 Score=31.47 Aligned_cols=53 Identities=11% Similarity=0.047 Sum_probs=39.5
Q ss_pred HHHHHHHhCCCCCcEEEcCCcchHHHHHHH--ccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 594 ILEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 594 ~L~~l~~~~gLs~~V~~~G~~~dv~~lysa--ADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
..+.+++++|++. ..++..++++. .|++++++- ...-.-.+++|+.+|++|++
T Consensus 61 ~a~~~a~~~g~~~------~y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 61 RAREMADRFSVPH------AFGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp HHHHHHHHHTCSE------EESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCe------eeCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEE
Confidence 3677888888752 13578888875 688888876 44545567999999999986
No 176
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=21.34 E-value=1.9e+02 Score=29.15 Aligned_cols=63 Identities=13% Similarity=-0.130 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCC-C-chhhh-hcCccEEEECc
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-E-PSFKT-SMKADLVIAGS 319 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~-~-~sfk~-~~k~DLVianS 319 (663)
||+--.-..|+.+|.+.|++|.++.-... .. ..+...++.++.... + .++.. ...+|.|+...
T Consensus 36 GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 36 GAGGFIASHIARRLKHEGHYVIASDWKKN-EH-MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESSCC-SS-SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCccHHHHHHHHHHHHCCCeEEEEECCCc-cc-hhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 33334567889999999999987653322 21 122334666664322 1 12222 24789887654
No 177
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.24 E-value=2.7e+02 Score=22.42 Aligned_cols=58 Identities=14% Similarity=0.062 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHCC-CeEEEEEEcCCCCChhHHhcCCeEEEeCCCC--chhh-hhcCccEEEECc
Q 006050 260 SMMELATELLSCG-ATVSAVVLSKRGGLMPELARRKIKVLEDRGE--PSFK-TSMKADLVIAGS 319 (663)
Q Consensus 260 smmeLA~~L~s~G-~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~--~sfk-~~~k~DLVianS 319 (663)
.-..++..|.+.| ++|.++. +...-.+++...++.++..... ..+. ....+|+|+...
T Consensus 16 iG~~~~~~l~~~g~~~v~~~~--r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 16 IGQMIAALLKTSSNYSVTVAD--HDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp HHHHHHHHHHHCSSEEEEEEE--SCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHHhCCCceEEEEe--CCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4456788899999 8876654 3332334455567766543221 1122 124688887654
No 178
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=21.24 E-value=1.4e+02 Score=27.65 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=33.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEEcCC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKR 283 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~-G~~V~vVvLs~~ 283 (663)
+.|++.|+..-...|--...++||..|++. |..|.++-+...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 467777776666667777889999999998 999998877654
No 179
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.18 E-value=1.5e+02 Score=28.75 Aligned_cols=71 Identities=14% Similarity=0.210 Sum_probs=42.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHC--CCeEEEEEEcCCCC-ChhHHhcCCeEEEeCCCC--c-------h---hh
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGG-LMPELARRKIKVLEDRGE--P-------S---FK 307 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~--G~~V~vVvLs~~Gg-L~~eL~~~gIkVl~~~~~--~-------s---fk 307 (663)
+||.+++ +.+| ..+..+...|.+. +++|.+|+..++.. ..+...+.||+++..... . . .-
T Consensus 4 ~ki~vl~---sG~g--~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 4 KRLAVFA---SGSG--TNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILREL 78 (212)
T ss_dssp EEEEEEC---CSSC--HHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred cEEEEEE---ECCc--HHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHH
Confidence 5776662 2333 3566777777776 68887776553332 334466789998742211 0 1 11
Q ss_pred hhcCccEEEEC
Q 006050 308 TSMKADLVIAG 318 (663)
Q Consensus 308 ~~~k~DLVian 318 (663)
...++|+|+.-
T Consensus 79 ~~~~~Dliv~a 89 (212)
T 3av3_A 79 KGRQIDWIALA 89 (212)
T ss_dssp HHTTCCEEEES
T ss_pred HhcCCCEEEEc
Confidence 34689999864
No 180
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=21.16 E-value=2.3e+02 Score=28.58 Aligned_cols=52 Identities=12% Similarity=0.241 Sum_probs=36.6
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEEe
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLEA 655 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVat 655 (663)
.+.+++.+++ ...++..+++. ..|++++.+- ...---.+.+|+.+|++|++-
T Consensus 52 ~~~~~~~~~~-------~~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~v~~E 105 (354)
T 3q2i_A 52 LKAAVERTGA-------RGHASLTDMLAQTDADIVILTTP--SGLHPTQSIECSEAGFHVMTE 105 (354)
T ss_dssp HHHHHHHHCC-------EEESCHHHHHHHCCCSEEEECSC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCC-------ceeCCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHCCCCEEEe
Confidence 4555666553 12357778887 6899888876 444455678999999999863
No 181
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=21.02 E-value=2.5e+02 Score=27.86 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=36.7
Q ss_pred HHHHHHhCCCCCcEEEcCCcchHHHHHH--HccEEEEcCCCCCCCCcHHHHHHHHcCCCEEE
Q 006050 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPMLE 654 (663)
Q Consensus 595 L~~l~~~~gLs~~V~~~G~~~dv~~lys--aADV~V~pS~~~~E~FG~ViiEAMA~GlPVVa 654 (663)
++.+++.+|.+ . ..++..+++. .+|++++.+- ...---.+++|+..|++|++
T Consensus 47 ~~~~a~~~g~~---~---~~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 47 LEWAKNELGVE---T---TYTNYKDMIDTENIDAIFIVAP--TPFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp HHHHHHTTCCS---E---EESCHHHHHTTSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCC---c---ccCCHHHHhcCCCCCEEEEeCC--hHhHHHHHHHHHHCCCEEEE
Confidence 55666766653 1 1246778886 5899998886 44445567899999999987
No 182
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=20.84 E-value=1.9e+02 Score=28.94 Aligned_cols=26 Identities=19% Similarity=0.023 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEE
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVL 280 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvL 280 (663)
||+--.-..|+..|.+.|++|.+++-
T Consensus 35 GatG~IG~~l~~~L~~~g~~V~~~~r 60 (381)
T 1n7h_A 35 GITGQDGSYLTEFLLGKGYEVHGLIR 60 (381)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEec
Confidence 33344567889999999999987653
No 183
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=20.84 E-value=1.4e+02 Score=29.16 Aligned_cols=66 Identities=9% Similarity=0.082 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEcCCC--CChhHHh----cCCeEEEeCCC-C-chhhhh---cCccEEEECch
Q 006050 255 TGAPLSMMELATELLSCGATVSAVVLSKRG--GLMPELA----RRKIKVLEDRG-E-PSFKTS---MKADLVIAGSA 320 (663)
Q Consensus 255 gGAp~smmeLA~~L~s~G~~V~vVvLs~~G--gL~~eL~----~~gIkVl~~~~-~-~sfk~~---~k~DLVianSa 320 (663)
||.--.-..|+.+|.+.|+++.++++.+.. .....+. ..++.++.... + ..+..+ .++|+|+...+
T Consensus 31 GatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~ 107 (346)
T 4egb_A 31 GGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAA 107 (346)
T ss_dssp TTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEECCC
T ss_pred CCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 333445678899999999666666555432 2222222 24677764322 1 122222 24899886543
No 184
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=20.76 E-value=1.5e+02 Score=31.62 Aligned_cols=69 Identities=26% Similarity=0.347 Sum_probs=43.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHhcCCeEEEeCCCCchhhhhcCccEEEECchh
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~~~gIkVl~~~~~~sfk~~~k~DLVianSav 321 (663)
++|++| ..||. -|..+|+.|.+.|++|++.-.. .....++|...|+++....... ....+|+|+....+
T Consensus 19 ~~i~vi----G~G~s--G~s~~A~~l~~~G~~V~~~D~~-~~~~~~~l~~~gi~~~~g~~~~---~~~~a~~vv~s~~i 87 (475)
T 1p3d_A 19 QQIHFI----GIGGA--GMSGIAEILLNEGYQISGSDIA-DGVVTQRLAQAGAKIYIGHAEE---HIEGASVVVVSSAI 87 (475)
T ss_dssp CEEEEE----TTTST--THHHHHHHHHHHTCEEEEEESC-CSHHHHHHHHTTCEEEESCCGG---GGTTCSEEEECTTS
T ss_pred CEEEEE----eecHH--HHHHHHHHHHhCCCEEEEECCC-CCHHHHHHHhCCCEEECCCCHH---HcCCCCEEEECCCC
Confidence 566655 44443 2234788889999999865432 2334457888999987543221 12468999987654
No 185
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=20.73 E-value=1.8e+02 Score=29.77 Aligned_cols=33 Identities=12% Similarity=-0.019 Sum_probs=22.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEE
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvL 280 (663)
.|.++|+ ||+--.-..+|..|++.|++|.++..
T Consensus 45 gk~vlVT-----Gas~GIG~aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 45 GCTVFIT-----GASRGIGKAIALKAAKDGANIVIAAK 77 (346)
T ss_dssp TCEEEEE-----TTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEe-----CCChHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566662 22222447899999999999877653
No 186
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=20.63 E-value=1.3e+02 Score=26.57 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=27.9
Q ss_pred CCeEEEEeCCCCC---CCHHHHHHHHHHHHHHCCCeEEEEEE
Q 006050 242 SRKFILIFHELSM---TGAPLSMMELATELLSCGATVSAVVL 280 (663)
Q Consensus 242 ~kKILLI~heLs~---gGAp~smmeLA~~L~s~G~~V~vVvL 280 (663)
++.+++++|.... .........++..|.++|+.|.++-+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEec
Confidence 3678999997532 22334567899999999999876643
No 187
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=20.60 E-value=1.3e+02 Score=28.73 Aligned_cols=32 Identities=19% Similarity=0.110 Sum_probs=21.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVv 279 (663)
.|+++|+ ||+--.-..+|..|.+.|++|.++.
T Consensus 7 ~k~vlVT-----Gas~GIG~aia~~l~~~G~~V~~~~ 38 (252)
T 3h7a_A 7 NATVAVI-----GAGDYIGAEIAKKFAAEGFTVFAGR 38 (252)
T ss_dssp SCEEEEE-----CCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEe
Confidence 4566663 3332345789999999999987654
No 188
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.50 E-value=1.8e+02 Score=27.95 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=33.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCC
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG 284 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~G 284 (663)
..+++.|+..-...|--....+||..|.+.|..|.++-+...+
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4577777666555677777899999999999999888765544
No 189
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=20.38 E-value=2.9e+02 Score=24.27 Aligned_cols=69 Identities=22% Similarity=0.079 Sum_probs=39.9
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCCChhHHh-cCCeEEEeCC-CCch-hhh--hcCccEEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA-RRKIKVLEDR-GEPS-FKT--SMKADLVI 316 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~GgL~~eL~-~~gIkVl~~~-~~~s-fk~--~~k~DLVi 316 (663)
.++|+++ |+ -..-..+|..|.+.|++|.++. +...-.+.+. ..|+.++... .... +.. ...+|+|+
T Consensus 19 ~~~v~Ii------G~-G~iG~~la~~L~~~g~~V~vid--~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 19 SKYIVIF------GC-GRLGSLIANLASSSGHSVVVVD--KNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCEEEEE------CC-SHHHHHHHHHHHHTTCEEEEEE--SCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCcEEEE------CC-CHHHHHHHHHHHhCCCeEEEEE--CCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4677766 22 2244568889999999987664 3333334444 5677666432 2211 221 34689998
Q ss_pred ECc
Q 006050 317 AGS 319 (663)
Q Consensus 317 anS 319 (663)
..+
T Consensus 90 ~~~ 92 (155)
T 2g1u_A 90 AFT 92 (155)
T ss_dssp ECS
T ss_pred EEe
Confidence 754
No 190
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.26 E-value=1.2e+02 Score=29.44 Aligned_cols=71 Identities=11% Similarity=0.117 Sum_probs=41.7
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCC--eEEEEEEcCCCC-ChhHHhcCCeEEEeCCC-C--------ch---hh
Q 006050 243 RKFILIFHELSMTGAPLSMMELATELLSCGA--TVSAVVLSKRGG-LMPELARRKIKVLEDRG-E--------PS---FK 307 (663)
Q Consensus 243 kKILLI~heLs~gGAp~smmeLA~~L~s~G~--~V~vVvLs~~Gg-L~~eL~~~gIkVl~~~~-~--------~s---fk 307 (663)
+||++++ |.+| ..+..+...|.+.++ +|.+|+..++.. ..+...+.||+++.... . .. .-
T Consensus 2 ~rI~vl~---SG~g--~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLV---SGRG--SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEE---CSCC--HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CEEEEEE---eCCc--HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH
Confidence 4777662 2334 356677788888777 776666444332 33445678999874211 0 11 11
Q ss_pred hhcCccEEEEC
Q 006050 308 TSMKADLVIAG 318 (663)
Q Consensus 308 ~~~k~DLVian 318 (663)
...++|+|+.-
T Consensus 77 ~~~~~Dliv~a 87 (216)
T 2ywr_A 77 KKKGVELVVLA 87 (216)
T ss_dssp HHTTCCEEEES
T ss_pred HhcCCCEEEEe
Confidence 24689999864
No 191
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=20.15 E-value=1.3e+02 Score=26.39 Aligned_cols=39 Identities=18% Similarity=0.025 Sum_probs=27.8
Q ss_pred CCeEEEEeCCCC---CCCHHHHHHHHHHHHHHCCCeEEEEEE
Q 006050 242 SRKFILIFHELS---MTGAPLSMMELATELLSCGATVSAVVL 280 (663)
Q Consensus 242 ~kKILLI~heLs---~gGAp~smmeLA~~L~s~G~~V~vVvL 280 (663)
++.+++++|... .+........++..|.+.|+.|.++-+
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEec
Confidence 467899999842 233334557899999999999876543
No 192
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.01 E-value=1.5e+02 Score=26.76 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=42.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEEcCCCCChhHHhcCCeEEEe-CCCCch-hhh---hcCccEE
Q 006050 242 SRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGLMPELARRKIKVLE-DRGEPS-FKT---SMKADLV 315 (663)
Q Consensus 242 ~kKILLI~heLs~gGAp~smmeLA~~L~s~-G~~V~vVvLs~~GgL~~eL~~~gIkVl~-~~~~~s-fk~---~~k~DLV 315 (663)
+++|+++ | +-..-..+|..|.+. |++|.++. +...-.+++...|+.++. +..+.. +.. ..++|+|
T Consensus 39 ~~~v~Ii------G-~G~~G~~~a~~L~~~~g~~V~vid--~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLIL------G-MGRIGTGAYDELRARYGKISLGIE--IREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEE------C-CSHHHHHHHHHHHHHHCSCEEEEE--SCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEE------C-CCHHHHHHHHHHHhccCCeEEEEE--CCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 5677776 2 223556788899998 99988764 333334556667887664 222222 222 3468999
Q ss_pred EECc
Q 006050 316 IAGS 319 (663)
Q Consensus 316 ianS 319 (663)
+..+
T Consensus 110 i~~~ 113 (183)
T 3c85_A 110 LLAM 113 (183)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8754
No 193
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.01 E-value=2e+02 Score=30.75 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=48.7
Q ss_pred ccccccCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEEcCCCC-ChhH----HhcC---CeEEEeCCCCch-
Q 006050 235 DFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPE----LARR---KIKVLEDRGEPS- 305 (663)
Q Consensus 235 ~~~~~~~~kKILLI~heLs~gGAp~smmeLA~~L~s~G~~V~vVvLs~~Gg-L~~e----L~~~---gIkVl~~~~~~s- 305 (663)
|+.....++|+++. ++ +-....|++.|.++|.+|..+....... +.++ +... ...|+.......
T Consensus 305 d~~~~l~gkrv~i~------~~-~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l 377 (458)
T 1mio_B 305 DAQQYLQGKKVALL------GD-PDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDV 377 (458)
T ss_dssp HTHHHHTTCEEEEE------EC-HHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHH
T ss_pred HHHHHcCCCEEEEE------cC-chHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHH
Confidence 34444577888876 33 4678899999999999998776554332 1111 3333 345665422111
Q ss_pred --hhhhcCccEEEECch
Q 006050 306 --FKTSMKADLVIAGSA 320 (663)
Q Consensus 306 --fk~~~k~DLVianSa 320 (663)
+....++|+++.++.
T Consensus 378 ~~~i~~~~pDl~ig~~~ 394 (458)
T 1mio_B 378 HQWIKNEGVDLLISNTY 394 (458)
T ss_dssp HHHHHHSCCSEEEESGG
T ss_pred HHHHHhcCCCEEEeCcc
Confidence 223458999999874
Done!