Query 006051
Match_columns 663
No_of_seqs 409 out of 4098
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 14:40:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006051.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006051hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ltla_ b.40.4.11 (A:) DNA rep 100.0 3E-42 2.2E-46 342.1 24.7 234 7-272 4-238 (239)
2 d1g8pa_ c.37.1.20 (A:) ATPase 100.0 1.2E-30 8.5E-35 273.0 18.9 261 313-609 6-306 (333)
3 d1in4a2 c.37.1.20 (A:17-254) H 99.7 1.8E-16 1.3E-20 156.1 17.7 220 314-608 9-234 (238)
4 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 2E-15 1.4E-19 148.6 22.5 223 313-608 8-235 (239)
5 d1ny5a2 c.37.1.20 (A:138-384) 99.7 1E-16 7.4E-21 158.3 11.7 211 348-603 24-245 (247)
6 d1lv7a_ c.37.1.20 (A:) AAA dom 99.7 3.6E-16 2.6E-20 154.9 15.2 221 314-608 12-252 (256)
7 d1ixza_ c.37.1.20 (A:) AAA dom 99.6 1E-16 7.6E-21 158.1 6.7 215 315-605 10-246 (247)
8 d1r6bx3 c.37.1.20 (X:437-751) 99.6 7.7E-15 5.6E-19 150.0 14.8 220 310-557 18-257 (315)
9 d1qvra3 c.37.1.20 (A:536-850) 99.5 2.2E-14 1.6E-18 146.4 13.5 221 309-557 18-262 (315)
10 d1njfa_ c.37.1.20 (A:) delta p 99.5 2.5E-13 1.8E-17 133.3 18.9 206 315-605 13-237 (239)
11 d1e32a2 c.37.1.20 (A:201-458) 99.5 9.5E-15 6.9E-19 145.3 8.1 165 314-509 4-186 (258)
12 d1ofha_ c.37.1.20 (A:) HslU {H 99.5 7E-14 5.1E-18 142.6 11.2 178 310-501 10-208 (309)
13 d1um8a_ c.37.1.20 (A:) ClpX {H 99.4 4.3E-13 3.1E-17 139.1 15.1 246 308-582 11-329 (364)
14 d1sxjc2 c.37.1.20 (C:12-238) R 99.4 1.5E-13 1.1E-17 133.7 10.6 204 314-605 14-225 (227)
15 d1iqpa2 c.37.1.20 (A:2-232) Re 99.4 7.2E-13 5.2E-17 129.2 11.5 199 313-604 23-229 (231)
16 d1sxjd2 c.37.1.20 (D:26-262) R 99.3 4.3E-12 3.1E-16 123.8 14.6 209 314-605 12-235 (237)
17 d1sxjb2 c.37.1.20 (B:7-230) Re 99.3 6E-12 4.4E-16 121.9 15.3 202 314-605 15-222 (224)
18 d1r7ra3 c.37.1.20 (A:471-735) 99.3 2.4E-13 1.8E-17 135.4 1.2 161 313-503 6-187 (265)
19 d1r6bx2 c.37.1.20 (X:169-436) 99.2 4.4E-11 3.2E-15 117.7 14.0 198 313-558 17-238 (268)
20 d1sxje2 c.37.1.20 (E:4-255) Re 99.1 7.8E-11 5.7E-15 115.8 12.2 145 314-495 11-191 (252)
21 d1fnna2 c.37.1.20 (A:1-276) CD 99.1 9.2E-10 6.7E-14 108.8 17.6 241 309-608 10-273 (276)
22 d1d2na_ c.37.1.20 (A:) Hexamer 99.1 1.1E-11 8.3E-16 121.5 2.7 121 347-493 40-173 (246)
23 d1qvra2 c.37.1.20 (A:149-535) 99.0 5.3E-10 3.9E-14 116.0 11.8 203 313-564 21-247 (387)
24 d1w5sa2 c.37.1.20 (A:7-293) CD 99.0 3.7E-10 2.7E-14 112.4 8.0 56 545-606 230-285 (287)
25 d1sxja2 c.37.1.20 (A:295-547) 98.9 4.2E-09 3E-13 103.2 15.2 123 313-435 13-149 (253)
26 d1w44a_ c.37.1.11 (A:) NTPase 98.9 3.2E-10 2.3E-14 114.0 6.0 130 348-495 124-262 (321)
27 d1g41a_ c.37.1.20 (A:) HslU {H 98.9 3.5E-09 2.6E-13 111.8 13.8 71 308-379 8-81 (443)
28 d1jbka_ c.37.1.20 (A:) ClpB, A 98.9 5.5E-10 4E-14 103.8 4.3 138 314-490 22-182 (195)
29 d1a5ta2 c.37.1.20 (A:1-207) de 98.8 3.3E-09 2.4E-13 100.8 9.3 137 318-491 6-164 (207)
30 d1l8qa2 c.37.1.20 (A:77-289) C 98.4 5.7E-07 4.2E-11 85.2 10.7 162 349-584 38-210 (213)
31 d2gnoa2 c.37.1.20 (A:11-208) g 98.3 2.3E-07 1.7E-11 86.9 6.2 112 347-487 15-132 (198)
32 d1svma_ c.37.1.20 (A:) Papillo 98.1 2.9E-06 2.1E-10 86.7 9.1 32 348-379 155-186 (362)
33 d1gvnb_ c.37.1.21 (B:) Plasmid 97.5 3.4E-05 2.5E-09 75.0 5.2 34 346-379 31-64 (273)
34 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.4 0.00012 8.7E-09 66.1 7.1 25 349-373 2-26 (178)
35 d1tuea_ c.37.1.20 (A:) Replica 97.4 9.8E-05 7.2E-09 67.5 6.1 97 348-462 54-152 (205)
36 d1u0ja_ c.37.1.20 (A:) Rep 40 97.1 0.0022 1.6E-07 61.8 13.3 149 348-542 105-254 (267)
37 d1kaga_ c.37.1.2 (A:) Shikimat 97.0 0.00013 9.4E-09 64.5 3.3 30 348-377 3-32 (169)
38 d1rkba_ c.37.1.1 (A:) Adenylat 96.9 0.00015 1.1E-08 64.9 2.4 30 348-377 5-34 (173)
39 d1lw7a2 c.37.1.1 (A:220-411) T 96.9 0.0002 1.5E-08 64.6 3.1 30 348-377 8-37 (192)
40 d2bdta1 c.37.1.25 (A:1-176) Hy 96.8 0.00027 2E-08 63.0 2.9 28 350-377 5-32 (176)
41 d1y63a_ c.37.1.1 (A:) Probable 96.6 0.00047 3.4E-08 61.6 3.6 27 347-373 5-31 (174)
42 d1viaa_ c.37.1.2 (A:) Shikimat 96.6 0.00031 2.2E-08 62.6 2.2 30 349-378 2-31 (161)
43 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.6 0.0003 2.2E-08 63.3 2.2 24 348-371 2-25 (189)
44 d1qhxa_ c.37.1.3 (A:) Chloramp 96.5 0.00053 3.9E-08 61.2 3.2 30 349-378 5-34 (178)
45 d2iyva1 c.37.1.2 (A:2-166) Shi 96.5 0.00057 4.1E-08 60.9 2.9 31 348-378 2-32 (165)
46 d1e6ca_ c.37.1.2 (A:) Shikimat 96.4 0.00062 4.5E-08 61.0 3.0 30 348-377 3-32 (170)
47 d1zp6a1 c.37.1.25 (A:6-181) Hy 96.4 0.00056 4.1E-08 61.1 2.7 31 348-378 5-35 (176)
48 d1zina1 c.37.1.1 (A:1-125,A:16 96.3 0.00062 4.5E-08 61.5 2.4 29 349-377 2-30 (182)
49 d1zaka1 c.37.1.1 (A:3-127,A:15 96.2 0.0006 4.4E-08 62.2 1.5 30 347-376 3-32 (189)
50 d1knqa_ c.37.1.17 (A:) Glucona 96.2 0.0011 8.1E-08 58.8 3.3 30 348-377 7-36 (171)
51 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.2 0.00085 6.2E-08 61.2 2.4 30 348-377 4-33 (190)
52 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.1 0.0012 8.6E-08 60.3 3.2 31 348-378 7-37 (189)
53 d1m8pa3 c.37.1.15 (A:391-573) 96.1 0.00096 7E-08 59.6 2.4 26 348-373 7-32 (183)
54 d2cdna1 c.37.1.1 (A:1-181) Ade 96.1 0.00096 7E-08 60.3 2.3 29 349-377 2-30 (181)
55 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.1 0.001 7.3E-08 60.2 2.3 29 349-377 2-30 (182)
56 d1ly1a_ c.37.1.1 (A:) Polynucl 96.0 0.0016 1.2E-07 56.5 3.3 23 350-372 5-27 (152)
57 d1ukza_ c.37.1.1 (A:) Uridylat 95.9 0.0015 1.1E-07 59.8 2.5 30 349-378 10-39 (196)
58 d1qf9a_ c.37.1.1 (A:) UMP/CMP 95.8 0.0015 1.1E-07 59.6 2.5 30 348-377 7-36 (194)
59 d1e4va1 c.37.1.1 (A:1-121,A:15 95.8 0.0014 1E-07 59.0 2.2 29 349-377 2-30 (179)
60 d1akya1 c.37.1.1 (A:3-130,A:16 95.8 0.0015 1.1E-07 58.9 2.4 30 348-377 3-32 (180)
61 d1teva_ c.37.1.1 (A:) UMP/CMP 95.8 0.0015 1.1E-07 59.6 2.3 30 348-377 2-31 (194)
62 d3adka_ c.37.1.1 (A:) Adenylat 95.8 0.0015 1.1E-07 59.8 2.0 31 348-378 9-39 (194)
63 d1w36d1 c.37.1.19 (D:2-360) Ex 95.8 0.004 2.9E-07 62.7 5.5 42 310-366 141-182 (359)
64 d1x6va3 c.37.1.4 (A:34-228) Ad 95.7 0.0014 9.9E-08 59.6 1.4 26 348-373 20-45 (195)
65 d1ckea_ c.37.1.1 (A:) CMP kina 95.3 0.0028 2.1E-07 58.8 2.2 30 350-379 6-35 (225)
66 d1yj5a2 c.37.1.1 (A:351-522) 5 95.3 0.0034 2.5E-07 56.2 2.5 26 347-372 14-39 (172)
67 d1a1va1 c.37.1.14 (A:190-325) 95.1 0.024 1.7E-06 47.9 7.5 28 407-434 92-119 (136)
68 d1q3ta_ c.37.1.1 (A:) CMP kina 95.1 0.004 2.9E-07 57.9 2.5 32 348-379 4-35 (223)
69 d1bifa1 c.37.1.7 (A:37-249) 6- 94.9 0.0044 3.2E-07 56.8 2.2 23 349-371 4-26 (213)
70 d2fnaa2 c.37.1.20 (A:1-283) Ar 94.5 0.013 9.5E-07 55.7 4.7 28 348-375 30-57 (283)
71 d1np6a_ c.37.1.10 (A:) Molybdo 94.4 0.0071 5.1E-07 53.1 2.2 23 349-371 4-26 (170)
72 d1gkya_ c.37.1.1 (A:) Guanylat 94.3 0.01 7.4E-07 53.6 3.1 28 348-375 2-29 (186)
73 d1khta_ c.37.1.1 (A:) Adenylat 94.2 0.0074 5.4E-07 53.8 2.0 23 349-371 3-25 (190)
74 d2a5yb3 c.37.1.20 (B:109-385) 94.0 0.013 9.7E-07 56.5 3.6 49 313-370 19-67 (277)
75 d1lvga_ c.37.1.1 (A:) Guanylat 93.8 0.014 1E-06 52.8 3.1 27 349-375 2-28 (190)
76 d1g6oa_ c.37.1.11 (A:) Hexamer 93.8 0.025 1.8E-06 55.7 5.1 87 348-437 167-260 (323)
77 d1upta_ c.37.1.8 (A:) ADP-ribo 93.7 0.013 9.7E-07 51.0 2.6 24 347-370 5-28 (169)
78 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.6 0.012 9.1E-07 50.8 2.3 21 349-369 2-22 (160)
79 d1yksa1 c.37.1.14 (A:185-324) 93.1 0.12 8.7E-06 42.9 7.9 20 345-364 5-24 (140)
80 d1ksha_ c.37.1.8 (A:) ADP-ribo 93.0 0.016 1.2E-06 50.7 2.0 22 348-369 3-24 (165)
81 d1nksa_ c.37.1.1 (A:) Adenylat 93.0 0.015 1.1E-06 51.8 1.8 23 350-372 4-26 (194)
82 d1znwa1 c.37.1.1 (A:20-201) Gu 92.8 0.022 1.6E-06 51.0 2.6 25 349-373 4-28 (182)
83 d1rz3a_ c.37.1.6 (A:) Hypothet 92.6 0.02 1.4E-06 51.4 2.1 26 347-372 22-47 (198)
84 d2qtvb1 c.37.1.8 (B:24-189) SA 92.4 0.024 1.7E-06 48.9 2.2 21 349-369 2-22 (166)
85 d1m7ga_ c.37.1.4 (A:) Adenosin 92.2 0.026 1.9E-06 51.9 2.2 24 348-371 25-48 (208)
86 d1szpa2 c.37.1.11 (A:145-395) 92.1 0.033 2.4E-06 51.8 2.9 25 345-369 32-56 (251)
87 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.8 0.024 1.7E-06 50.2 1.5 23 347-369 13-35 (186)
88 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.7 0.029 2.1E-06 49.4 2.0 22 348-369 16-37 (177)
89 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.7 0.031 2.3E-06 48.8 2.2 22 348-369 3-24 (164)
90 d2atva1 c.37.1.8 (A:5-172) Ras 91.7 0.032 2.3E-06 49.0 2.2 23 347-369 2-24 (168)
91 d1n0wa_ c.37.1.11 (A:) DNA rep 91.4 0.05 3.6E-06 49.2 3.4 28 344-371 20-47 (242)
92 d2a5ja1 c.37.1.8 (A:9-181) Rab 91.3 0.037 2.7E-06 48.8 2.2 22 348-369 4-25 (173)
93 d1kgda_ c.37.1.1 (A:) Guanylat 91.3 0.048 3.5E-06 48.6 3.0 27 349-375 5-31 (178)
94 d1tf7a2 c.37.1.11 (A:256-497) 91.2 0.053 3.9E-06 50.4 3.4 24 347-370 26-49 (242)
95 d1zd9a1 c.37.1.8 (A:18-181) AD 90.9 0.04 2.9E-06 48.0 2.1 22 348-369 3-24 (164)
96 d2erya1 c.37.1.8 (A:10-180) r- 90.7 0.044 3.2E-06 48.1 2.1 22 348-369 6-27 (171)
97 d1kaoa_ c.37.1.8 (A:) Rap2a {H 90.6 0.046 3.3E-06 47.8 2.2 22 348-369 4-25 (167)
98 d1z0fa1 c.37.1.8 (A:8-173) Rab 90.6 0.047 3.4E-06 47.7 2.2 22 348-369 5-26 (166)
99 d1z08a1 c.37.1.8 (A:17-183) Ra 90.5 0.047 3.4E-06 47.7 2.2 21 349-369 5-25 (167)
100 d1z0ja1 c.37.1.8 (A:2-168) Rab 90.4 0.046 3.4E-06 47.8 2.0 22 348-369 5-26 (167)
101 d2fh5b1 c.37.1.8 (B:63-269) Si 90.3 0.05 3.6E-06 49.4 2.2 22 349-370 2-23 (207)
102 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.3 0.045 3.3E-06 48.2 1.8 23 347-369 16-38 (176)
103 d1pzna2 c.37.1.11 (A:96-349) D 90.2 0.058 4.2E-06 50.3 2.7 24 347-370 36-59 (254)
104 d2fn4a1 c.37.1.8 (A:24-196) r- 90.2 0.048 3.5E-06 48.0 1.9 22 348-369 7-28 (173)
105 d1s96a_ c.37.1.1 (A:) Guanylat 90.2 0.072 5.3E-06 48.5 3.2 26 348-373 3-28 (205)
106 d1ctqa_ c.37.1.8 (A:) cH-p21 R 90.1 0.047 3.4E-06 47.7 1.8 22 348-369 4-25 (166)
107 d3raba_ c.37.1.8 (A:) Rab3a {R 90.1 0.055 4E-06 47.4 2.2 22 348-369 6-27 (169)
108 d1ky3a_ c.37.1.8 (A:) Rab-rela 90.1 0.053 3.9E-06 47.6 2.1 22 348-369 3-24 (175)
109 d1e0sa_ c.37.1.8 (A:) ADP-ribo 90.1 0.036 2.6E-06 48.8 0.9 22 348-369 13-34 (173)
110 d2erxa1 c.37.1.8 (A:6-176) di- 90.0 0.049 3.6E-06 47.7 1.8 22 348-369 3-24 (171)
111 d1c1ya_ c.37.1.8 (A:) Rap1A {H 90.0 0.056 4.1E-06 47.2 2.2 22 348-369 4-25 (167)
112 d1v5wa_ c.37.1.11 (A:) Meiotic 90.0 0.09 6.6E-06 48.9 3.8 27 344-370 34-60 (258)
113 d2f9la1 c.37.1.8 (A:8-182) Rab 89.8 0.059 4.3E-06 47.5 2.2 22 348-369 5-26 (175)
114 d1r2qa_ c.37.1.8 (A:) Rab5a {H 89.8 0.061 4.4E-06 47.1 2.2 22 348-369 7-28 (170)
115 d1z06a1 c.37.1.8 (A:32-196) Ra 89.7 0.061 4.4E-06 46.8 2.2 22 348-369 3-24 (165)
116 d2gj8a1 c.37.1.8 (A:216-376) P 89.7 0.052 3.8E-06 46.9 1.7 23 348-370 2-24 (161)
117 d2ew1a1 c.37.1.8 (A:4-174) Rab 89.7 0.057 4.2E-06 47.4 2.0 22 348-369 6-27 (171)
118 d1uj2a_ c.37.1.6 (A:) Uridine- 89.7 0.07 5.1E-06 48.6 2.7 27 348-374 3-29 (213)
119 d2f7sa1 c.37.1.8 (A:5-190) Rab 89.6 0.058 4.2E-06 48.0 2.0 22 348-369 6-27 (186)
120 d1x3sa1 c.37.1.8 (A:2-178) Rab 89.6 0.062 4.5E-06 47.4 2.2 22 348-369 8-29 (177)
121 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 89.6 0.063 4.6E-06 47.0 2.2 22 348-369 4-25 (170)
122 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 89.5 0.063 4.6E-06 47.7 2.1 22 348-369 3-24 (184)
123 d1nrjb_ c.37.1.8 (B:) Signal r 89.5 0.066 4.8E-06 48.4 2.3 23 348-370 4-26 (209)
124 d1yzqa1 c.37.1.8 (A:14-177) Ra 89.4 0.062 4.5E-06 46.7 2.0 21 349-369 2-22 (164)
125 d1xtqa1 c.37.1.8 (A:3-169) GTP 89.3 0.06 4.4E-06 47.0 1.8 22 348-369 5-26 (167)
126 d1tf7a1 c.37.1.11 (A:14-255) C 89.3 0.07 5.1E-06 49.0 2.4 24 345-368 24-47 (242)
127 d1g16a_ c.37.1.8 (A:) Rab-rela 89.2 0.064 4.7E-06 46.7 1.9 22 348-369 3-24 (166)
128 d1uaaa1 c.37.1.19 (A:2-307) DE 89.2 0.065 4.7E-06 51.6 2.1 23 348-370 15-38 (306)
129 d2onka1 c.37.1.12 (A:1-240) Mo 89.2 0.068 4.9E-06 49.8 2.1 23 350-372 27-49 (240)
130 d2i1qa2 c.37.1.11 (A:65-322) D 89.1 0.07 5.1E-06 49.4 2.3 28 344-371 31-58 (258)
131 d2pmka1 c.37.1.12 (A:467-707) 89.1 0.061 4.4E-06 50.4 1.7 29 344-372 26-54 (241)
132 d1sgwa_ c.37.1.12 (A:) Putativ 89.0 0.062 4.6E-06 48.8 1.7 27 346-372 26-52 (200)
133 d1u8za_ c.37.1.8 (A:) Ras-rela 88.9 0.076 5.6E-06 46.4 2.2 22 348-369 5-26 (168)
134 d3d31a2 c.37.1.12 (A:1-229) Su 88.9 0.071 5.2E-06 49.4 2.0 25 348-372 27-51 (229)
135 d1moza_ c.37.1.8 (A:) ADP-ribo 88.9 0.05 3.7E-06 48.2 0.9 22 347-368 17-38 (182)
136 d2awna2 c.37.1.12 (A:4-235) Ma 88.9 0.08 5.8E-06 49.1 2.4 27 346-372 25-51 (232)
137 d1mh1a_ c.37.1.8 (A:) Rac {Hum 88.8 0.076 5.5E-06 47.1 2.2 22 348-369 6-27 (183)
138 d1xjca_ c.37.1.10 (A:) Molybdo 88.8 0.075 5.5E-06 46.3 2.1 22 350-371 4-25 (165)
139 d1l2ta_ c.37.1.12 (A:) MJ0796 88.7 0.071 5.2E-06 49.4 1.9 26 346-371 30-55 (230)
140 d2gjsa1 c.37.1.8 (A:91-258) Ra 88.7 0.072 5.2E-06 46.6 1.9 22 349-370 3-24 (168)
141 d2bmea1 c.37.1.8 (A:6-179) Rab 88.6 0.076 5.5E-06 46.6 2.0 22 348-369 6-27 (174)
142 d2g3ya1 c.37.1.8 (A:73-244) GT 88.6 0.078 5.7E-06 46.6 2.0 22 348-369 4-25 (172)
143 d1mkya1 c.37.1.8 (A:2-172) Pro 88.5 0.079 5.8E-06 46.3 2.0 20 350-369 3-22 (171)
144 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 88.5 0.078 5.7E-06 46.7 2.0 22 348-369 3-24 (177)
145 d1p9ra_ c.37.1.11 (A:) Extrace 88.4 0.68 5E-05 46.4 9.4 73 349-421 160-239 (401)
146 d1x1ra1 c.37.1.8 (A:10-178) Ra 88.4 0.085 6.2E-06 46.2 2.1 22 348-369 5-26 (169)
147 d3b60a1 c.37.1.12 (A:329-581) 88.4 0.072 5.3E-06 50.2 1.7 28 345-372 39-66 (253)
148 d1wmsa_ c.37.1.8 (A:) Rab9a {H 88.3 0.089 6.4E-06 46.2 2.2 22 348-369 7-28 (174)
149 d2cxxa1 c.37.1.8 (A:2-185) GTP 88.2 0.072 5.2E-06 47.1 1.6 21 349-369 2-22 (184)
150 d1svia_ c.37.1.8 (A:) Probable 88.2 0.074 5.4E-06 47.7 1.6 22 348-369 24-45 (195)
151 d2g6ba1 c.37.1.8 (A:58-227) Ra 87.9 0.096 7E-06 45.7 2.2 22 348-369 7-28 (170)
152 d1g2912 c.37.1.12 (1:1-240) Ma 87.9 0.093 6.7E-06 48.9 2.1 27 346-372 28-54 (240)
153 d1kkma_ c.91.1.2 (A:) HPr kina 87.9 0.1 7.3E-06 46.1 2.3 23 348-370 15-37 (176)
154 d1yrba1 c.37.1.10 (A:1-244) AT 87.8 0.096 7E-06 48.4 2.2 22 350-371 3-24 (244)
155 d2atxa1 c.37.1.8 (A:9-193) Rho 87.7 0.09 6.6E-06 46.8 1.9 22 348-369 10-31 (185)
156 d1oxxk2 c.37.1.12 (K:1-242) Gl 87.6 0.086 6.3E-06 49.2 1.7 28 345-372 29-56 (242)
157 d1jj7a_ c.37.1.12 (A:) Peptide 87.5 0.088 6.4E-06 49.5 1.8 28 345-372 38-65 (251)
158 d2bmja1 c.37.1.8 (A:66-240) Ce 87.5 0.11 7.8E-06 45.9 2.2 24 347-370 5-28 (175)
159 d1vmaa2 c.37.1.10 (A:82-294) G 87.4 0.14 1E-05 46.7 3.1 24 345-368 9-32 (213)
160 d1mv5a_ c.37.1.12 (A:) Multidr 87.4 0.09 6.5E-06 49.2 1.7 28 345-372 26-53 (242)
161 d1v43a3 c.37.1.12 (A:7-245) Hy 87.3 0.1 7.6E-06 48.5 2.1 25 348-372 33-57 (239)
162 d3dhwc1 c.37.1.12 (C:1-240) Me 87.2 0.084 6.1E-06 49.2 1.4 25 348-372 32-56 (240)
163 d1mkya2 c.37.1.8 (A:173-358) P 87.2 0.13 9.3E-06 45.5 2.6 23 347-369 8-30 (186)
164 d1r0wa_ c.37.1.12 (A:) Cystic 87.0 0.1 7.6E-06 49.9 2.0 29 344-372 59-87 (281)
165 d1m7ba_ c.37.1.8 (A:) RhoE (RN 86.9 0.11 8E-06 45.9 2.0 22 348-369 3-24 (179)
166 d2ngra_ c.37.1.8 (A:) CDC42 {H 86.9 0.11 7.8E-06 46.5 1.9 22 348-369 4-25 (191)
167 d1j8yf2 c.37.1.10 (F:87-297) G 86.9 0.11 8.1E-06 47.4 2.0 23 346-368 11-33 (211)
168 d2fu5c1 c.37.1.8 (C:3-175) Rab 86.8 0.07 5.1E-06 46.9 0.6 22 348-369 7-28 (173)
169 d1puia_ c.37.1.8 (A:) Probable 86.8 0.063 4.6E-06 47.3 0.2 23 347-369 16-38 (188)
170 d1okkd2 c.37.1.10 (D:97-303) G 86.7 0.13 9.1E-06 46.9 2.2 22 348-369 7-28 (207)
171 d1knxa2 c.91.1.2 (A:133-309) H 86.6 0.11 8.2E-06 45.8 1.8 23 348-370 16-38 (177)
172 d1zcba2 c.37.1.8 (A:47-75,A:20 86.5 0.11 8.2E-06 46.3 1.8 21 348-368 3-23 (200)
173 d1pjra1 c.37.1.19 (A:1-318) DE 86.4 0.11 8.1E-06 50.3 1.9 22 349-370 26-48 (318)
174 d1i2ma_ c.37.1.8 (A:) Ran {Hum 86.2 0.081 5.9E-06 46.4 0.6 22 348-369 4-25 (170)
175 d1ls1a2 c.37.1.10 (A:89-295) G 86.2 0.14 1E-05 46.6 2.3 20 350-369 13-32 (207)
176 d2bcgy1 c.37.1.8 (Y:3-196) GTP 86.2 0.13 9.3E-06 46.1 2.0 22 348-369 7-28 (194)
177 d1h65a_ c.37.1.8 (A:) Chloropl 86.1 0.11 8.3E-06 48.9 1.7 23 347-369 32-54 (257)
178 d1wf3a1 c.37.1.8 (A:3-180) GTP 86.1 0.13 9.2E-06 45.3 1.9 21 349-369 7-27 (178)
179 d1udxa2 c.37.1.8 (A:157-336) O 86.0 0.11 7.9E-06 45.8 1.4 21 349-369 3-23 (180)
180 d1ko7a2 c.91.1.2 (A:130-298) H 86.0 0.14 1E-05 44.9 2.1 23 348-370 16-38 (169)
181 d1htaa_ a.22.1.2 (A:) Archaeal 85.8 1.5 0.00011 31.6 7.6 64 526-607 4-67 (68)
182 d2qy9a2 c.37.1.10 (A:285-495) 85.6 0.16 1.1E-05 46.3 2.3 21 348-368 10-30 (211)
183 d1htwa_ c.37.1.18 (A:) Hypothe 85.6 0.2 1.5E-05 43.2 2.9 26 348-373 34-59 (158)
184 d1svsa1 c.37.1.8 (A:32-60,A:18 85.5 0.31 2.3E-05 42.9 4.4 22 348-369 3-24 (195)
185 d1b0ua_ c.37.1.12 (A:) ATP-bin 85.3 0.13 9.4E-06 48.5 1.6 29 344-372 25-53 (258)
186 d1xzpa2 c.37.1.8 (A:212-371) T 85.3 0.064 4.7E-06 46.2 -0.6 22 349-370 2-23 (160)
187 d1uf9a_ c.37.1.1 (A:) Dephosph 85.3 0.16 1.1E-05 45.2 2.1 23 348-370 4-26 (191)
188 d2fz4a1 c.37.1.19 (A:24-229) D 85.2 0.83 6.1E-05 40.9 7.3 25 349-373 87-111 (206)
189 d1qhla_ c.37.1.12 (A:) Cell di 85.1 0.14 9.8E-06 45.5 1.6 22 350-371 27-48 (222)
190 d1egaa1 c.37.1.8 (A:4-182) GTP 85.1 0.15 1.1E-05 44.6 1.9 21 349-369 7-27 (179)
191 d1l7vc_ c.37.1.12 (C:) ABC tra 84.9 0.17 1.3E-05 46.8 2.3 27 345-371 23-49 (231)
192 d2vp4a1 c.37.1.1 (A:12-208) De 84.8 0.14 1E-05 45.7 1.6 28 348-375 10-37 (197)
193 d2hyda1 c.37.1.12 (A:324-578) 84.3 0.095 6.9E-06 49.4 0.1 26 346-371 43-68 (255)
194 d1wb9a2 c.37.1.12 (A:567-800) 84.2 0.74 5.4E-05 42.4 6.5 22 348-369 42-63 (234)
195 g1f2t.1 c.37.1.12 (A:,B:) Rad5 84.0 0.18 1.3E-05 47.7 2.0 21 348-369 25-45 (292)
196 d1sq5a_ c.37.1.6 (A:) Pantothe 83.9 0.2 1.4E-05 48.5 2.3 28 345-372 78-105 (308)
197 d1ku5a_ a.22.1.2 (A:) Archaeal 83.6 2.1 0.00015 30.5 7.5 63 526-606 3-65 (66)
198 d2gmga1 a.4.5.82 (A:1-105) Hyp 83.6 0.23 1.7E-05 39.1 2.1 25 150-187 69-93 (105)
199 d1nlfa_ c.37.1.11 (A:) Hexamer 83.3 0.19 1.4E-05 47.4 1.8 22 348-369 30-51 (274)
200 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 83.1 0.23 1.7E-05 44.0 2.3 24 348-371 3-26 (200)
201 d1nija1 c.37.1.10 (A:2-223) Hy 83.1 0.43 3.2E-05 43.6 4.3 21 350-370 6-26 (222)
202 d1lnza2 c.37.1.8 (A:158-342) O 83.1 0.17 1.2E-05 44.7 1.3 21 349-369 3-23 (185)
203 d1vpla_ c.37.1.12 (A:) Putativ 83.0 0.2 1.4E-05 46.6 1.8 27 346-372 27-53 (238)
204 d1g6ha_ c.37.1.12 (A:) MJ1267 83.0 0.18 1.3E-05 47.3 1.6 29 344-372 27-55 (254)
205 d1u94a1 c.37.1.11 (A:6-268) Re 82.5 0.36 2.6E-05 45.5 3.5 24 347-370 54-77 (263)
206 d1ji0a_ c.37.1.12 (A:) Branche 82.5 0.21 1.5E-05 46.5 1.7 27 346-372 31-57 (240)
207 d1lkoa2 g.41.5.1 (A:148-191) R 82.4 1.2 8.7E-05 29.0 4.9 36 144-193 4-41 (44)
208 d1azta2 c.37.1.8 (A:35-65,A:20 81.7 0.24 1.8E-05 45.3 1.9 22 348-369 7-28 (221)
209 d1u0la2 c.37.1.8 (A:69-293) Pr 81.7 0.35 2.5E-05 44.3 2.9 20 349-368 97-116 (225)
210 d1vhta_ c.37.1.1 (A:) Dephosph 81.5 0.27 2E-05 44.5 2.1 27 350-377 6-32 (208)
211 d4tmka_ c.37.1.1 (A:) Thymidyl 81.0 0.27 2E-05 44.4 1.9 23 349-371 4-26 (210)
212 d1gsia_ c.37.1.1 (A:) Thymidyl 80.8 0.31 2.2E-05 43.7 2.2 22 350-371 3-24 (208)
213 d1cr2a_ c.37.1.11 (A:) Gene 4 80.7 0.37 2.7E-05 45.4 2.9 22 348-369 36-57 (277)
214 d2ocpa1 c.37.1.1 (A:37-277) De 80.6 0.42 3.1E-05 43.9 3.2 29 348-376 3-31 (241)
215 d1odfa_ c.37.1.6 (A:) Hypothet 80.2 0.33 2.4E-05 46.3 2.3 24 347-370 27-50 (286)
216 d1jjva_ c.37.1.1 (A:) Dephosph 80.0 0.3 2.2E-05 44.0 1.8 27 350-377 5-31 (205)
217 d2p67a1 c.37.1.10 (A:1-327) LA 79.6 0.33 2.4E-05 47.3 2.1 23 348-370 55-77 (327)
218 d1ewqa2 c.37.1.12 (A:542-765) 79.4 1.9 0.00014 39.2 7.3 20 350-369 38-57 (224)
219 d1xpua3 c.37.1.11 (A:129-417) 79.2 0.41 3E-05 45.5 2.6 22 349-370 45-66 (289)
220 d2jdid3 c.37.1.11 (D:82-357) C 79.1 1.3 9.4E-05 41.6 6.1 22 349-370 70-91 (276)
221 d1nn5a_ c.37.1.1 (A:) Thymidyl 79.0 0.39 2.8E-05 43.5 2.3 22 350-371 6-27 (209)
222 d1e9ra_ c.37.1.11 (A:) Bacteri 78.8 0.37 2.7E-05 48.7 2.3 22 347-368 50-71 (433)
223 d2qm8a1 c.37.1.10 (A:5-327) Me 78.7 1.3 9.1E-05 42.9 6.1 23 348-370 52-74 (323)
224 g1ii8.1 c.37.1.12 (A:,B:) Rad5 78.6 0.36 2.6E-05 46.5 2.0 20 350-369 26-45 (369)
225 g1xew.1 c.37.1.12 (X:,Y:) Smc 77.7 0.3 2.2E-05 47.3 1.1 21 351-371 30-50 (329)
226 d1xx6a1 c.37.1.24 (A:2-142) Th 77.3 5.4 0.00039 33.1 9.1 90 345-437 6-108 (141)
227 d1p5zb_ c.37.1.1 (B:) Deoxycyt 77.1 0.26 1.9E-05 45.2 0.4 24 350-373 5-28 (241)
228 d1gm5a3 c.37.1.19 (A:286-549) 76.9 1.1 8.2E-05 41.8 5.0 40 318-369 87-126 (264)
229 d1deka_ c.37.1.1 (A:) Deoxynuc 76.6 0.5 3.6E-05 43.4 2.3 23 350-372 4-26 (241)
230 d1t9ha2 c.37.1.8 (A:68-298) Pr 75.6 0.29 2.1E-05 45.0 0.3 19 350-368 100-118 (231)
231 d1tq4a_ c.37.1.8 (A:) Interfer 74.9 0.45 3.3E-05 47.7 1.6 23 347-369 56-78 (400)
232 d1g8fa3 c.37.1.15 (A:390-511) 74.6 1.8 0.00013 35.0 4.9 22 348-369 7-28 (122)
233 d1mo6a1 c.37.1.11 (A:1-269) Re 73.3 1.1 7.7E-05 42.2 3.7 23 348-370 61-83 (269)
234 d1wb1a4 c.37.1.8 (A:1-179) Elo 73.0 0.55 4E-05 41.0 1.5 24 347-370 5-28 (179)
235 d1tmka_ c.37.1.1 (A:) Thymidyl 72.8 0.97 7.1E-05 40.8 3.2 25 349-373 5-29 (214)
236 d1xp8a1 c.37.1.11 (A:15-282) R 72.2 0.97 7.1E-05 42.4 3.1 24 348-371 58-81 (268)
237 d2huec1 a.22.1.1 (C:20-101) Hi 71.5 4.5 0.00033 30.2 6.3 65 525-607 9-73 (82)
238 d1e69a_ c.37.1.12 (A:) Smc hea 70.7 0.51 3.7E-05 45.0 0.8 22 350-371 27-48 (308)
239 d2p6ra3 c.37.1.19 (A:1-202) He 70.7 1.1 7.7E-05 39.9 2.9 18 348-365 41-58 (202)
240 d2eyqa3 c.37.1.19 (A:546-778) 70.0 1.5 0.00011 40.1 3.9 40 318-369 59-98 (233)
241 d1wp9a1 c.37.1.19 (A:1-200) pu 69.9 0.89 6.5E-05 40.1 2.2 21 348-368 24-44 (200)
242 d1g7sa4 c.37.1.8 (A:1-227) Ini 69.5 1 7.3E-05 41.1 2.5 27 343-370 2-28 (227)
243 d1w1wa_ c.37.1.12 (A:) Smc hea 68.7 0.87 6.3E-05 45.3 2.0 20 351-370 29-48 (427)
244 d1brfa_ g.41.5.1 (A:) Rubredox 67.7 3.1 0.00023 28.2 4.1 13 147-159 1-13 (53)
245 d1a7ja_ c.37.1.6 (A:) Phosphor 67.2 0.52 3.8E-05 44.8 -0.1 24 349-372 6-29 (288)
246 d2b8ta1 c.37.1.24 (A:11-149) T 66.7 10 0.00073 31.2 8.3 20 351-370 6-26 (139)
247 d1tzyb_ a.22.1.1 (B:) Histone 65.9 8.8 0.00064 29.1 6.9 62 533-609 7-70 (92)
248 d1x6ha1 g.37.1.1 (A:44-80) Tra 64.2 0.89 6.5E-05 27.2 0.6 13 147-159 3-15 (37)
249 d1gkub1 c.37.1.16 (B:1-250) He 64.2 1.6 0.00012 39.7 2.8 19 348-366 59-77 (237)
250 d1puja_ c.37.1.8 (A:) Probable 64.0 2.9 0.00021 39.0 4.7 23 347-369 112-134 (273)
251 d1nnqa2 g.41.5.1 (A:135-171) R 60.5 4.5 0.00033 25.2 3.5 22 147-178 4-25 (37)
252 d1yuza2 g.41.5.1 (A:167-202) N 59.9 4.1 0.0003 25.2 3.2 22 147-178 4-25 (36)
253 d1xbta1 c.37.1.24 (A:18-150) T 59.9 10 0.00075 30.8 7.0 23 346-369 2-25 (133)
254 d2c78a3 c.37.1.8 (A:9-212) Elo 58.7 1.8 0.00013 38.7 1.9 23 347-369 3-25 (204)
255 d1qdea_ c.37.1.19 (A:) Initiat 58.3 6.8 0.0005 34.7 6.0 16 348-363 48-63 (212)
256 d1s24a_ g.41.5.1 (A:) Two-iron 56.9 7.4 0.00054 26.5 4.5 13 147-159 3-15 (56)
257 d1p6xa_ c.37.1.1 (A:) Thymidin 56.7 1.9 0.00014 41.7 1.8 25 348-372 7-31 (333)
258 d1oywa2 c.37.1.19 (A:1-206) Re 56.5 2.8 0.00021 36.9 3.0 21 348-368 41-61 (206)
259 d1q0ua_ c.37.1.19 (A:) Probabl 54.9 2.7 0.0002 37.2 2.6 16 348-363 39-54 (209)
260 d1ni3a1 c.37.1.8 (A:11-306) Yc 54.9 2.6 0.00019 39.8 2.5 26 345-370 8-33 (296)
261 d1jfib_ a.22.1.3 (B:) Negative 54.2 26 0.0019 28.3 8.6 70 525-611 4-73 (135)
262 d2jdia3 c.37.1.11 (A:95-379) C 53.5 3.1 0.00023 39.1 2.7 21 349-369 70-90 (285)
263 d1n0ua2 c.37.1.8 (A:3-343) Elo 53.2 6.4 0.00047 37.8 5.2 35 403-437 115-149 (341)
264 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 53.1 1.8 0.00013 45.3 1.1 22 348-369 25-47 (623)
265 d1t6na_ c.37.1.19 (A:) Spliceo 52.8 8 0.00058 34.0 5.5 16 348-363 39-54 (207)
266 d1c9ka_ c.37.1.11 (A:) Adenosy 52.8 2.6 0.00019 36.7 2.0 28 350-377 2-29 (180)
267 d1f1ea_ a.22.1.2 (A:) Archaeal 51.6 27 0.002 28.8 8.5 67 523-607 77-143 (151)
268 d1n1ja_ a.22.1.3 (A:) Nuclear 50.7 30 0.0022 25.5 7.8 68 526-609 3-70 (87)
269 d2qn6a3 c.37.1.8 (A:2-206) Ini 50.1 3.3 0.00024 36.6 2.2 26 344-369 5-30 (205)
270 d1x6ea2 g.37.1.1 (A:41-66) Zin 50.1 3.1 0.00022 23.7 1.3 12 149-160 3-14 (26)
271 d1e2ka_ c.37.1.1 (A:) Thymidin 47.6 2.7 0.0002 40.4 1.2 25 348-372 5-29 (329)
272 d1osna_ c.37.1.1 (A:) Thymidin 47.3 2.6 0.00019 40.6 1.1 25 348-372 6-30 (331)
273 d1v1qa_ b.40.4.3 (A:) Primosom 45.9 32 0.0024 26.6 7.6 49 222-275 54-106 (111)
274 d2bmfa2 c.37.1.14 (A:178-482) 45.8 4.7 0.00034 37.5 2.8 19 344-362 6-24 (305)
275 d1j3ba1 c.91.1.1 (A:212-529) P 45.8 2.7 0.0002 40.0 0.9 15 350-364 17-31 (318)
276 d2dy1a2 c.37.1.8 (A:8-274) Elo 45.4 4.3 0.00031 37.7 2.3 25 348-372 3-27 (267)
277 d2g9na1 c.37.1.19 (A:21-238) I 44.7 5.1 0.00037 35.8 2.7 16 348-363 50-65 (218)
278 d1d2ea3 c.37.1.8 (A:55-250) El 44.1 4.5 0.00033 35.6 2.1 25 346-370 2-26 (196)
279 d1jfia_ a.22.1.3 (A:) Negative 44.1 16 0.0011 25.6 4.8 63 526-605 3-65 (66)
280 d2olra1 c.91.1.1 (A:228-540) P 44.1 3.4 0.00025 39.1 1.4 15 350-364 17-31 (313)
281 d1veca_ c.37.1.19 (A:) DEAD bo 43.9 4.6 0.00033 35.7 2.2 16 348-363 41-56 (206)
282 d1h3ob_ a.22.1.3 (B:) TAF(II)- 42.6 53 0.0039 23.4 9.3 63 526-605 4-66 (74)
283 d1n1jb_ a.22.1.3 (B:) Nuclear 42.4 29 0.0021 24.9 6.3 51 544-609 17-67 (78)
284 d2q78a1 d.38.1.7 (A:1-130) Unc 42.2 57 0.0041 26.0 8.7 85 38-144 14-98 (130)
285 d1dx8a_ g.41.5.1 (A:) Rubredox 42.1 6.8 0.00049 28.1 2.4 15 145-159 4-18 (70)
286 d2bv3a2 c.37.1.8 (A:7-282) Elo 40.9 5.1 0.00037 37.3 2.0 25 348-372 7-31 (276)
287 d1iroa_ g.41.5.1 (A:) Rubredox 40.8 16 0.0011 24.5 4.0 12 148-159 3-14 (53)
288 d1wxqa1 c.37.1.8 (A:1-319) GTP 40.7 4.4 0.00032 38.4 1.6 21 350-370 3-23 (319)
289 d1kk1a3 c.37.1.8 (A:6-200) Ini 40.4 5.1 0.00037 34.9 1.9 24 346-369 4-27 (195)
290 d1fx0a3 c.37.1.11 (A:97-372) C 39.6 6.8 0.0005 36.4 2.7 21 349-369 69-89 (276)
291 d1ii2a1 c.91.1.1 (A:201-523) P 39.3 4.5 0.00033 38.4 1.3 15 350-364 17-31 (323)
292 d2dlqa2 g.37.1.1 (A:35-62) GLI 38.5 3.4 0.00025 22.9 0.2 10 149-158 2-11 (28)
293 d1byia_ c.37.1.10 (A:) Dethiob 38.1 5.6 0.00041 34.8 1.8 22 349-370 3-25 (224)
294 d1f5na2 c.37.1.8 (A:7-283) Int 37.8 5.6 0.00041 37.1 1.8 22 349-370 34-55 (277)
295 d1hv8a1 c.37.1.19 (A:3-210) Pu 37.7 8.7 0.00063 33.8 3.1 19 348-366 43-61 (208)
296 d1s2ma1 c.37.1.19 (A:46-251) P 37.7 7.6 0.00055 34.1 2.6 16 348-363 39-54 (206)
297 d1jala1 c.37.1.8 (A:1-278) Ych 37.6 6.7 0.00048 36.4 2.3 23 348-370 3-25 (278)
298 d1dfxa2 g.41.5.2 (A:1-36) Desu 37.5 7.7 0.00056 23.6 1.7 15 147-161 5-19 (36)
299 d2ak3a2 g.41.2.1 (A:125-161) M 37.1 11 0.00083 23.2 2.6 14 148-161 2-15 (37)
300 d1vzia2 g.41.5.2 (A:1-37) Desu 37.0 8.3 0.0006 23.6 1.8 15 147-161 5-19 (37)
301 d1wrba1 c.37.1.19 (A:164-401) 36.8 9.1 0.00067 34.5 3.1 24 348-371 59-84 (238)
302 d1f1ea_ a.22.1.2 (A:) Archaeal 36.1 77 0.0056 25.8 8.9 67 526-609 2-68 (151)
303 d2j0sa1 c.37.1.19 (A:22-243) P 35.9 8.3 0.0006 34.5 2.6 16 348-363 55-70 (222)
304 d1dxga_ g.41.5.2 (A:) Desulfor 35.4 9.1 0.00066 23.3 1.8 14 148-161 6-19 (36)
305 d1ihua1 c.37.1.10 (A:1-296) Ar 35.2 7.1 0.00052 36.0 2.1 24 348-371 9-32 (296)
306 d1nnxa_ b.40.10.1 (A:) Hypothe 34.4 29 0.0021 26.8 5.3 42 221-272 62-105 (106)
307 d1a1ia2 g.37.1.1 (A:132-159) Z 34.3 7.5 0.00054 22.4 1.3 13 148-160 3-15 (28)
308 d1zina2 g.41.2.1 (A:126-160) M 33.7 17 0.0012 22.1 2.9 14 148-161 2-15 (35)
309 d1t5la1 c.37.1.19 (A:2-414) Nu 32.7 20 0.0014 35.2 5.0 46 321-379 18-63 (413)
310 d1q9ca_ a.22.1.3 (A:) Histone 32.3 1.1E+02 0.008 25.5 9.2 65 524-606 98-162 (172)
311 d1jwyb_ c.37.1.8 (B:) Dynamin 32.2 7.4 0.00054 36.4 1.6 21 349-369 26-46 (306)
312 d6rxna_ g.41.5.1 (A:) Rubredox 31.5 29 0.0021 22.3 4.0 12 148-159 3-14 (45)
313 d1x6ea1 g.37.1.1 (A:8-40) Zinc 31.1 8.8 0.00064 23.0 1.3 14 148-161 7-20 (33)
314 d1jnya3 c.37.1.8 (A:4-227) Elo 31.0 8.3 0.0006 34.4 1.7 22 347-368 3-24 (224)
315 d2bykb1 a.22.1.3 (B:11-99) Chr 30.8 42 0.0031 24.7 5.7 51 544-609 17-67 (89)
316 d1lkxa_ c.37.1.9 (A:) Myosin S 30.8 9.6 0.0007 40.3 2.4 23 347-369 86-108 (684)
317 d1goja_ c.37.1.9 (A:) Kinesin 30.7 12 0.00088 35.9 3.0 17 348-364 81-97 (354)
318 d2akab1 c.37.1.8 (B:6-304) Dyn 30.7 7.9 0.00057 36.0 1.5 21 349-369 28-48 (299)
319 d2dsxa1 g.41.5.1 (A:1-52) Rubr 30.7 26 0.0019 23.3 3.7 12 148-159 3-14 (52)
320 d1s3ga2 g.41.2.1 (A:126-160) M 30.2 20 0.0014 21.7 2.8 14 148-161 2-15 (35)
321 d1d0xa2 c.37.1.9 (A:2-33,A:80- 29.5 10 0.00076 40.2 2.4 23 347-369 125-147 (712)
322 d1bg2a_ c.37.1.9 (A:) Kinesin 29.1 14 0.001 34.9 3.1 17 348-364 77-93 (323)
323 d1v6ga2 g.39.1.3 (A:42-81) Act 29.0 6.2 0.00045 24.2 0.3 12 234-245 10-21 (40)
324 d2mysa2 c.37.1.9 (A:4-33,A:80- 26.7 11 0.00083 40.4 2.1 22 347-368 123-144 (794)
325 d1ihua2 c.37.1.10 (A:308-586) 26.2 13 0.00092 34.0 2.1 22 348-369 21-42 (279)
326 d1br2a2 c.37.1.9 (A:80-789) My 25.9 13 0.00096 39.4 2.4 23 347-369 91-113 (710)
327 d1kk8a2 c.37.1.9 (A:1-28,A:77- 25.2 13 0.00095 39.9 2.2 23 347-369 121-143 (789)
328 d1ls1a1 a.24.13.1 (A:1-88) Sig 25.2 32 0.0023 25.6 3.9 35 582-616 8-42 (88)
329 d1w7ja2 c.37.1.9 (A:63-792) My 25.1 14 0.001 39.4 2.4 23 347-369 94-116 (730)
330 d1x3zb1 a.189.1.1 (B:253-309) 25.0 20 0.0014 23.3 2.2 28 45-72 29-56 (57)
331 d1twfl_ g.41.9.2 (L:) RBP12 su 25.0 29 0.0021 22.3 3.0 29 147-188 3-31 (46)
332 d2zfia1 c.37.1.9 (A:4-352) Kin 24.5 19 0.0014 34.4 3.1 17 348-364 88-104 (349)
333 d1zunb3 c.37.1.8 (B:16-237) Su 24.1 17 0.0012 32.3 2.5 24 348-371 10-33 (222)
334 d1x88a1 c.37.1.9 (A:18-362) Ki 24.1 21 0.0015 33.9 3.3 17 348-364 82-98 (345)
335 d1r5ba3 c.37.1.8 (A:215-459) E 24.0 13 0.00097 33.5 1.7 23 347-369 24-46 (245)
336 d1w36b1 c.37.1.19 (B:1-485) Ex 23.9 12 0.00088 36.9 1.5 23 348-370 17-40 (485)
337 d1c4oa1 c.37.1.19 (A:2-409) Nu 23.6 44 0.0032 32.4 5.7 52 314-378 7-59 (408)
338 d1sdma_ c.37.1.9 (A:) Kinesin 23.1 17 0.0012 34.9 2.5 17 348-364 76-92 (364)
339 d1x6ha2 g.37.1.1 (A:8-43) Tran 23.1 15 0.0011 22.3 1.3 15 147-161 7-21 (36)
340 d2ncda_ c.37.1.9 (A:) Kinesin 22.6 18 0.0013 34.9 2.5 17 348-364 126-142 (368)
341 d1rifa_ c.37.1.23 (A:) DNA hel 22.4 24 0.0018 32.4 3.4 21 349-369 130-150 (282)
342 d2f4mb1 a.189.1.1 (B:275-332) 22.3 20 0.0015 24.5 1.9 28 44-71 29-56 (58)
343 d1akya2 g.41.2.1 (A:131-168) M 22.3 33 0.0024 21.1 2.8 14 148-161 2-15 (38)
344 d2adra1 g.37.1.1 (A:102-130) A 22.1 9.6 0.0007 22.1 0.2 12 149-160 3-14 (29)
345 d1srka_ g.37.1.1 (A:) Zinc fin 22.0 16 0.0012 22.1 1.3 13 148-160 7-19 (35)
346 g1f2t.1 c.37.1.12 (A:,B:) Rad5 21.6 30 0.0022 31.0 3.9 29 407-435 223-252 (292)
347 d1v8ka_ c.37.1.9 (A:) Kinesin 21.5 18 0.0013 34.8 2.1 17 348-364 115-131 (362)
348 d1f60a3 c.37.1.8 (A:2-240) Elo 21.3 17 0.0012 32.6 1.9 26 345-370 4-29 (239)
349 d2ct1a1 g.37.1.1 (A:44-71) Tra 21.1 10 0.00076 21.0 0.2 12 148-159 2-13 (28)
350 d1a1ia3 g.37.1.1 (A:160-187) Z 21.1 19 0.0014 20.3 1.3 12 148-159 3-14 (28)
351 d2ct1a2 g.37.1.1 (A:8-43) Tran 21.1 17 0.0013 22.1 1.3 13 148-160 8-20 (36)
352 d1ry6a_ c.37.1.9 (A:) Kinesin 20.3 15 0.0011 34.7 1.3 18 348-365 86-103 (330)
No 1
>d1ltla_ b.40.4.11 (A:) DNA replication initiator (cdc21/cdc54) N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=100.00 E-value=3e-42 Score=342.15 Aligned_cols=234 Identities=26% Similarity=0.395 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHH-HHhHHHHHHhhcCCCCCCceeEEEechhhcccCHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhhhh
Q 006051 7 PAHLKALAEFVI-RHHSDQLRSITLSPDPKLHYPLYIDFAELLDEDPEIAHLVFSKPADYLRFFEDAAIWAHKIVFDELK 85 (663)
Q Consensus 7 ~~~~~~f~~Fl~-~~~~~~i~~~~~~~~~~~~~~l~Vd~~~L~~~dp~La~~l~~~P~~~l~~~~~a~~~~~~~~~~~~~ 85 (663)
.+.+..|.+||. ++|.+++.+++... +. ..+|.|||.||..|||+|++.|+++|.+++++|++|+.++. .
T Consensus 4 ~~~l~~f~e~~~~~~y~~~i~~~~~~~-~~-~~sl~Vd~~~L~~~~~~L~~~l~~~P~~~l~~~~~ai~~~~-----~-- 74 (239)
T d1ltla_ 4 SKTLTKFEEFFSLQDYKDRVFEAIEKY-PN-VRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNID-----R-- 74 (239)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHHHHHT-TS-CCEEEEEHHHHHHHCTTHHHHHHHSHHHHHHHHHHHHTTTC-----T--
T ss_pred HHHHHHHHHHhchHhHHHHHHHHHHcC-CC-CcEEEEEHHHHHhhCHHHHHHHHHCHHHHHHHHHHHHHhHH-----h--
Confidence 466778999984 56899999887653 22 45799999999999999999999999999999999986531 1
Q ss_pred hhhhhcccceEEEEEeeCCCCCCCCCCCcccccccccCCCcEEEEeeEEEEecCceeEEEEEEEEecCCCCeeeeccccc
Q 006051 86 SCEKRVEKKFIHVRINVSGSPLECPETFPSIGRVRVKHHGVLLTLKGTVIRSGATKMYEGERTYMCRKCKHMFPVYPELE 165 (663)
Q Consensus 86 ~~~~~~~~~~~~vri~~~~~p~~~p~~~~~ir~l~~~~igklv~i~G~V~r~s~vk~~~~~~~f~C~~C~~~~~~~~~~~ 165 (663)
......+++|+. + +| ...++|+|++.++||||+|+|+|+|+|.|+|++.+++|+|.+||+.+.+..
T Consensus 75 ----~~~~~~i~vr~~--~----~~-~~~~ir~l~s~~igkLv~v~GiV~r~s~v~~~~~~~~~~C~~C~~~~~~~~--- 140 (239)
T d1ltla_ 75 ----LRKNVDLNIRFS--G----IS-NVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQ--- 140 (239)
T ss_dssp ----TCCCCCCEEEEE--C----CS-CBCCGGGCCGGGTTSEEEEEEEEEEECCCEEEEEEEEEEETTTCCEEEEEC---
T ss_pred ----hccCceEEEEEc--C----CC-CccchhccchhhhccEEEEEEEEEEeCCEEEEEEEEEEECCCCCceEEEEe---
Confidence 112335788887 2 33 345689999999999999999999999999999999999999999877643
Q ss_pred ccccccCCCCCCCCCCCCCCCCceEEecCeeeEeeeeEEEEeecccccCCCCcceEEEEEEecCcccceeeCCEEEEEEE
Q 006051 166 TRNSIVLPSHCPSQRSKPCEGTNFQFVENSIICHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVIVTGI 245 (663)
Q Consensus 166 ~~~~~~~p~~Cp~~~~~~C~~~~f~~~~~~s~~~d~Q~ikiQE~~~~~~~g~~Prsi~V~L~~dLv~~~~pGd~V~v~GI 245 (663)
..+.+..|..|| .|++++|.++.+.|.|+|||+|+|||.|++++.|++||+++|+|++||||+|+|||+|.|+||
T Consensus 141 ~~~~~~~p~~C~-----~C~~~~f~~~~~~s~~~d~Q~i~iQE~~e~~~~G~~Pr~i~v~l~~dlvd~~~pGd~V~i~GI 215 (239)
T d1ltla_ 141 STNMITEPSLCS-----ECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGT 215 (239)
T ss_dssp SSSSCCCCSCCT-----TTCCCCEEECGGGCEEEEEEEEEEECCSTTCCSSCCCCEEEEEEEGGGTTCCCTTCEEEEEEE
T ss_pred cCCeecCCccCC-----CCCCcccEEccCcceEeeeEEEEEecccccCCCCCCCcEEEEEEeccccCccCCCCEEEEEEE
Confidence 346678899997 498889999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCcCcccccceEEEeeeeee
Q 006051 246 LTAKWSPDLKDVRCDLDPVLIANHVRR 272 (663)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~a~~i~~ 272 (663)
++...... .+.++.++.||||+.
T Consensus 216 ~~~~~~~~----~~~~~~~i~a~~Ie~ 238 (239)
T d1ltla_ 216 LRTVRDER----TKRFKNFIYGNYTEF 238 (239)
T ss_dssp EEEEEETT----TTEEEEEEEEEECCB
T ss_pred EEEeecCC----CCceEEEEEEEEEEE
Confidence 98764422 235788999999874
No 2
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.97 E-value=1.2e-30 Score=273.02 Aligned_cols=261 Identities=23% Similarity=0.213 Sum_probs=187.3
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceE----------------
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVI---------------- 376 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~---------------- 376 (663)
+++|+||+.+|+|++++++.. +..|+||+||||||||++||.++.++|.-..
T Consensus 6 f~~I~Gq~~~kral~laa~~~------------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~ 73 (333)
T d1g8pa_ 6 FSAIVGQEDMKLALLLTAVDP------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPD 73 (333)
T ss_dssp GGGSCSCHHHHHHHHHHHHCG------------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCT
T ss_pred hhhccCcHHHHHHHHHHHhcc------------CCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccccccc
Confidence 458999999999999999832 1168999999999999999999998754222
Q ss_pred -----------------EeCCCcccCCceEEEe----ecCchhHhhhhhhhhccCCeeecccccccChhhHHhHHHHHHh
Q 006051 377 -----------------TTGLGSTSAGLTVTAV----KDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQ 435 (663)
Q Consensus 377 -----------------~~~~~~~~~gl~~~~~----~~~~~~~~~~g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~ 435 (663)
....+.+..++..... ...|.+..++|.+.+|++||+||||+++++++.+++|+++||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~ 153 (333)
T d1g8pa_ 74 WATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQS 153 (333)
T ss_dssp TCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred hhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcC
Confidence 2122222222222111 1127788899999999999999999999999999999999999
Q ss_pred ceeeeeccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCC
Q 006051 436 QTISVAKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSE 515 (663)
Q Consensus 436 ~~i~i~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~ 515 (663)
|+++++++|....+|++|.++||+||+. ..+++++++|||+.+.+.++.+.+....+..+.........
T Consensus 154 ~~v~i~r~g~~~~~p~~f~liaa~Np~~-----------~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 222 (333)
T d1g8pa_ 154 GENVVERDGLSIRHPARFVLVGSGNPEE-----------GDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPK 222 (333)
T ss_dssp SEEEECCTTCCEEEECCEEEEEEECSCS-----------CCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHH
T ss_pred CeEEecccCceecCCCCEEEEEecCccc-----------cccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChH
Confidence 9999999999999999999999999972 25788999999999988777665554443332211111000
Q ss_pred CCCCCCCCCCC--CHHHHHHHH-HHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccC
Q 006051 516 EKDTEPLTDIW--PLAMLRRYI-YFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMF 592 (663)
Q Consensus 516 ~~~~~~~~~~~--~~~~l~~~i-~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~ 592 (663)
.....+ ....++.-+ ..........+++++...+...+...+. .++|....++|+|+++|+|++
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~--------~S~R~~~~llrvArtiA~L~g 289 (333)
T d1g8pa_ 223 -----AFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS--------DGLRGELTLLRSARALAALEG 289 (333)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSS--------CSHHHHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCC--------CChHHHHHHHHHHHHHHHHcC
Confidence 000000 011122222 2222223345677777666666544322 368999999999999999999
Q ss_pred CCccChhhHHHHHHHHH
Q 006051 593 RNEVTRLDAITAILCIE 609 (663)
Q Consensus 593 ~~~V~~~Dv~~Ai~l~~ 609 (663)
++.|+.+|+.+|+.++-
T Consensus 290 r~~V~~~di~~a~~lvL 306 (333)
T d1g8pa_ 290 ATAVGRDHLKRVATMAL 306 (333)
T ss_dssp CSBCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 99999999999998763
No 3
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.69 E-value=1.8e-16 Score=156.07 Aligned_cols=220 Identities=22% Similarity=0.249 Sum_probs=144.3
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEee
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVK 393 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~~ 393 (663)
.+|+|++.+|+.+...+-.+..+ -....|+||+||||||||++|+++++.....+........ .
T Consensus 9 ~divGqe~~~~~l~~~i~~~~~~-------~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~---------~ 72 (238)
T d1in4a2 9 DEFIGQENVKKKLSLALEAAKMR-------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVL---------V 72 (238)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHHH-------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTC---------C
T ss_pred HHcCChHHHHHHHHHHHHHHHhc-------CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCccc---------c
Confidence 47899999998887665432110 0123589999999999999999999988776654321110 0
Q ss_pred cCchhHhhhhhhh-hccCCeeecccccccChhhHHhHHHHHHhceeeeecc--C---ceeecCCcEEEEEeeCCCCCCCC
Q 006051 394 DGGEWMLEAGALV-LADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKA--G---LVTTLSTRTIIFGATNPKGHYDP 467 (663)
Q Consensus 394 ~~~~~~~~~g~l~-~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~--g---~~~~~~~~~~iiaatN~~g~~d~ 467 (663)
..+. ..+.+. ...++++|+||++.+.+..++.+...|+.+.+..... + .......++.+|++||...
T Consensus 73 ~~~~---~~~~~~~~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~---- 145 (238)
T d1in4a2 73 KQGD---MAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSG---- 145 (238)
T ss_dssp SHHH---HHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGG----
T ss_pred cHHH---HHHHHHhhccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCc----
Confidence 1111 122222 2457899999999999999999999999877543211 1 1111235778889888752
Q ss_pred CCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCccC
Q 006051 468 NLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPILT 547 (663)
Q Consensus 468 ~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ls 547 (663)
.+.+++++||+.++.+..+...+. ..++..........++
T Consensus 146 --------~~~~~~~~r~~~~~~~~~~~~~~~--------------------------------~~~l~~~~~~~~~~~~ 185 (238)
T d1in4a2 146 --------LLSSPLRSRFGIILELDFYTVKEL--------------------------------KEIIKRAASLMDVEIE 185 (238)
T ss_dssp --------GSCHHHHTTCSEEEECCCCCHHHH--------------------------------HHHHHHHHHHTTCCBC
T ss_pred --------cccccceeeeeEEEEecCCCHHHH--------------------------------HHHHHHhhhhccchhh
Confidence 355689999998877644333222 2222222222344677
Q ss_pred HHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHH
Q 006051 548 KEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCI 608 (663)
Q Consensus 548 ~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~ 608 (663)
+++.+.+..+ ..+++|...++++.+...|.....+.|+.+++.+|+..+
T Consensus 186 ~~~l~~i~~~------------s~gd~R~ai~~l~~~~~~~~~~~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 186 DAAAEMIAKR------------SRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 234 (238)
T ss_dssp HHHHHHHHHT------------STTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHh------------CCCCHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHhh
Confidence 7777766544 245789998888888777777788899999999998765
No 4
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.67 E-value=2e-15 Score=148.63 Aligned_cols=223 Identities=25% Similarity=0.276 Sum_probs=145.5
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEe
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAV 392 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~ 392 (663)
+.+++|++.+|+.+...+-.... +-....|+||+||||||||++|+++++.....+........
T Consensus 8 ~ddivGq~~~~~~L~~~i~~~~~-------~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~--------- 71 (239)
T d1ixsb2 8 LDEYIGQERLKQKLRVYLEAAKA-------RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAI--------- 71 (239)
T ss_dssp GGGSCSCHHHHHHHHHHHHHHTT-------SSSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTC---------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHh-------cCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCcc---------
Confidence 34789999999988766543211 01223689999999999999999999988877655432111
Q ss_pred ecCchhHhhhhhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccC-----ceeecCCcEEEEEeeCCCCCCCC
Q 006051 393 KDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAG-----LVTTLSTRTIIFGATNPKGHYDP 467 (663)
Q Consensus 393 ~~~~~~~~~~g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g-----~~~~~~~~~~iiaatN~~g~~d~ 467 (663)
...+...... .-...++.|++|||++.++...+..++.+|+...+...... ....-+.++.+++++|...
T Consensus 72 ~~~~~~~~~~-~~~~~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 146 (239)
T d1ixsb2 72 EKPGDLAAIL-ANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG---- 146 (239)
T ss_dssp CSHHHHHHHH-HTTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCS----
T ss_pred ccchhhHHHH-HhhccCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCcc----
Confidence 0001111010 01223567999999999999999999999998765443211 1223356778888888653
Q ss_pred CCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCccC
Q 006051 468 NLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPILT 547 (663)
Q Consensus 468 ~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ls 547 (663)
...++.++|+...+.+.. ++.+....+...+. ......++
T Consensus 147 --------~~~~~~l~~~~~~~~~~~-~~~~~~~~i~~~~~-------------------------------~~~~i~~~ 186 (239)
T d1ixsb2 147 --------LITAPLLSRFGIVEHLEY-YTPEELAQGVMRDA-------------------------------RLLGVRIT 186 (239)
T ss_dssp --------SCSCGGGGGCSEEEECCC-CCHHHHHHHHHHHH-------------------------------GGGCCCBC
T ss_pred --------cccchhhcccceeeEeec-cChhhhhHHHHHHH-------------------------------HHhCCccc
Confidence 223467888877776633 33222222221221 12234567
Q ss_pred HHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHH
Q 006051 548 KEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCI 608 (663)
Q Consensus 548 ~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~ 608 (663)
+++.+.|... ..+++|...++++.+...|.....+.|+.+++.+|+..+
T Consensus 187 ~~~l~~ia~~------------s~gd~R~a~~~l~~~~~~a~~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 187 EEAALEIGRR------------SRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAAL 235 (239)
T ss_dssp HHHHHHHHHH------------TTSSHHHHHHHHHHHHHHHTTSCCSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHH------------cCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHhhh
Confidence 7766666654 234689999999998889999999999999999988654
No 5
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.66 E-value=1e-16 Score=158.32 Aligned_cols=211 Identities=20% Similarity=0.263 Sum_probs=134.3
Q ss_pred cccccccCCCchHHHHHHHHHHhcCC---ceEEeCCCcccCCceEEEeecC------chhHhhhhhhhhccCCeeecccc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNR---SVITTGLGSTSAGLTVTAVKDG------GEWMLEAGALVLADGGLCCIDEF 418 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~---~~~~~~~~~~~~gl~~~~~~~~------~~~~~~~g~l~~a~~gvl~iDEi 418 (663)
.||||.||+||||+.+|++++..++. +++...+...........+++. +......|.+..|+||++||||+
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~a~gGtL~l~~i 103 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEI 103 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESG
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHHhcCcccCCcCCcccccCCHHHccCCCEEEEeCh
Confidence 78999999999999999999987654 3444333221111000000100 11112367888999999999999
Q ss_pred cccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChh
Q 006051 419 DSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPE 498 (663)
Q Consensus 419 d~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~ 498 (663)
+.++...|..|..+++++.+. +.|.......++++|++||.. . .....+..+.+.|+.|+....+-.++-.+.
T Consensus 104 ~~L~~~~Q~~L~~~l~~~~~~--~~~~~~~~~~~~RlI~~s~~~----l-~~l~~~~~f~~~L~~~l~~~~i~lPpLreR 176 (247)
T d1ny5a2 104 GELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN----I-KELVKEGKFREDLYYRLGVIEIEIPPLRER 176 (247)
T ss_dssp GGCCHHHHHHHHHHHHHSEEC--CBTCCSBEECCCEEEEEESSC----H-HHHHHTTSSCHHHHHHHTTEEEECCCGGGC
T ss_pred HhCCHHHHHHHHHHHHhCCEE--ECCCCCceecCeEEEEecCCC----H-HHHHHcCCCcHHHHhhcCeeeecCCChhhc
Confidence 999999999999999998863 344444556678899999863 0 011112245567888876543221211111
Q ss_pred HHH--HHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhH
Q 006051 499 WDA--VVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRM 576 (663)
Q Consensus 499 ~d~--~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~ 576 (663)
.+. .+..++ ++++..... .-.+.+|++|.+.|..| +||+|+|+
T Consensus 177 ~~Di~~l~~~~-----------------------l~~~~~~~~-~~~~~ls~~al~~L~~~-----------~WPGNl~E 221 (247)
T d1ny5a2 177 KEDIIPLANHF-----------------------LKKFSRKYA-KEVEGFTKSAQELLLSY-----------PWYGNVRE 221 (247)
T ss_dssp HHHHHHHHHHH-----------------------HHHHHHHTT-CCCCEECHHHHHHHHHS-----------CCTTHHHH
T ss_pred hhhHhhhhhhh-----------------------hhhhhhhcC-CCCCCCCHHHHHHHHhC-----------CCCCHHHH
Confidence 111 112222 222322221 12356999999999998 89999999
Q ss_pred HHHHHHHHHHHHhccCCCccChhhHHH
Q 006051 577 LESLIRLAQAHARLMFRNEVTRLDAIT 603 (663)
Q Consensus 577 Le~lirla~a~A~l~~~~~V~~~Dv~~ 603 (663)
|+++++.+-+.+. .+.|+.+|+-.
T Consensus 222 L~~~l~~a~~~~~---~~~I~~~dl~~ 245 (247)
T d1ny5a2 222 LKNVIERAVLFSE---GKFIDRGELSC 245 (247)
T ss_dssp HHHHHHHHHHHCC---SSEECHHHHHH
T ss_pred HHHHHHHHHHhCC---CCeECHHHccc
Confidence 9999997765553 56889988753
No 6
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.66 E-value=3.6e-16 Score=154.86 Aligned_cols=221 Identities=20% Similarity=0.139 Sum_probs=132.2
Q ss_pred cccCchhHHHHHHHHHH--hCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEE
Q 006051 314 PQVFGLFTVKLAVALTL--IGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTA 391 (663)
Q Consensus 314 p~i~G~~~~K~aill~l--~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~ 391 (663)
.+|.|++.+|+.|.-.+ +...... .....+.+.++||+||||||||++|+++|+.++.+++....+.......
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~~~~~~~~--~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~~~--- 86 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEYLREPSRF--QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFV--- 86 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHHHHCGGGC-------CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTSCC---
T ss_pred HHHhchHHHHHHHHHHHHHHHCHHHH--HHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhcch---
Confidence 48999999888775322 1111111 1222345578999999999999999999999999888865543322111
Q ss_pred eecCchhHhh-h-hhhhhccCCeeecccccccChh--------------hHHhHHHHHHhceeeeeccCceeecCCcEEE
Q 006051 392 VKDGGEWMLE-A-GALVLADGGLCCIDEFDSMREH--------------DRATIHEAMEQQTISVAKAGLVTTLSTRTII 455 (663)
Q Consensus 392 ~~~~~~~~~~-~-g~l~~a~~gvl~iDEid~l~~~--------------~~~~L~~~me~~~i~i~k~g~~~~~~~~~~i 455 (663)
+.++..+. . .......++|+||||+|.+... ..+.++..|+.-. -+.++.+
T Consensus 87 --g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~-----------~~~~v~v 153 (256)
T d1lv7a_ 87 --GVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFE-----------GNEGIIV 153 (256)
T ss_dssp --CCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCC-----------SSSCEEE
T ss_pred --hHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCC-----------CCCCEEE
Confidence 11111111 0 0111235679999999986321 1234555554211 1346799
Q ss_pred EEeeCCCCCCCCCCccccccCCChhhhh--hhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHH
Q 006051 456 FGATNPKGHYDPNLSLSVNTTLSGPLLS--RFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRR 533 (663)
Q Consensus 456 iaatN~~g~~d~~~~~~~~~~l~~aLl~--RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~ 533 (663)
|||||.+.. ++++|++ |||..+.+ +.|+.+.+..+.++.+.....
T Consensus 154 IatTn~~~~------------ld~al~R~gRfd~~i~i-~~P~~~~R~~il~~~l~~~~~-------------------- 200 (256)
T d1lv7a_ 154 IAATNRPDV------------LDPALLRPGRFDRQVVV-GLPDVRGREQILKVHMRRVPL-------------------- 200 (256)
T ss_dssp EEEESCTTT------------SCGGGGSTTSSCEEEEC-CCCCHHHHHHHHHHHHTTSCB--------------------
T ss_pred EEeCCCccc------------CCHhHcCCCCCCEEEEC-CCcCHHHHHHHHHHhccCCCc--------------------
Confidence 999998744 4558886 99999988 445655555555444422110
Q ss_pred HHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHH
Q 006051 534 YIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCI 608 (663)
Q Consensus 534 ~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~ 608 (663)
.+... ...|.+ . ....|.+.+..+++-|...|..+.+..|+..|+..|+.-+
T Consensus 201 ---------~~~~~---~~~la~------~-----t~G~s~adi~~l~~~A~~~a~~~~~~~i~~~d~~~Al~rv 252 (256)
T d1lv7a_ 201 ---------APDID---AAIIAR------G-----TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 252 (256)
T ss_dssp ---------CTTCC---HHHHHH------T-----CTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred ---------CcccC---HHHHHH------h-----CCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 00000 011111 0 1235678899999988777777788899999999998654
No 7
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.62 E-value=1e-16 Score=158.13 Aligned_cols=215 Identities=21% Similarity=0.177 Sum_probs=128.0
Q ss_pred ccCchhHHHHHHHHHH--hCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEe
Q 006051 315 QVFGLFTVKLAVALTL--IGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAV 392 (663)
Q Consensus 315 ~i~G~~~~K~aill~l--~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~ 392 (663)
+|.|++.+|+.|.-.+ +.........| .+.+.++||+||||||||++|+++++.++.+++....+.....
T Consensus 10 di~G~~~~k~~l~~~i~~l~~~~~~~~~g--~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~------ 81 (247)
T d1ixza_ 10 DVAGAEEAKEELKEIVEFLKNPSRFHEMG--ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM------ 81 (247)
T ss_dssp GCCSCHHHHHHHHHHHHHHHCHHHHHHTT--CCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS------
T ss_pred HHccHHHHHHHHHHHHHHHHCHHHHHHcC--CCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc------
Confidence 6889999888764321 11111111112 2344679999999999999999999999888876532211000
Q ss_pred ecCchhHhh-hhhhh---hccCCeeecccccccChh--------------hHHhHHHHHHhceeeeeccCceeecCCcEE
Q 006051 393 KDGGEWMLE-AGALV---LADGGLCCIDEFDSMREH--------------DRATIHEAMEQQTISVAKAGLVTTLSTRTI 454 (663)
Q Consensus 393 ~~~~~~~~~-~g~l~---~a~~gvl~iDEid~l~~~--------------~~~~L~~~me~~~i~i~k~g~~~~~~~~~~ 454 (663)
..|+.... .-.+. ...++|+||||+|.+... ..+.++..|+.- .-+.++.
T Consensus 82 -~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~-----------~~~~~vi 149 (247)
T d1ixza_ 82 -FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIV 149 (247)
T ss_dssp -CTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTC-----------CTTCCEE
T ss_pred -cccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCC-----------CCCCCEE
Confidence 00111100 01111 235679999999986321 123345555421 1145678
Q ss_pred EEEeeCCCCCCCCCCccccccCCChhhhh--hhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHH
Q 006051 455 IFGATNPKGHYDPNLSLSVNTTLSGPLLS--RFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLR 532 (663)
Q Consensus 455 iiaatN~~g~~d~~~~~~~~~~l~~aLl~--RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~ 532 (663)
||||||.+. .+++++++ |||..+.+ +.|+.+....+.++.+...... .... +
T Consensus 150 vi~tTn~~~------------~ld~al~R~~Rf~~~i~~-~~P~~~eR~~il~~~l~~~~~~---------~~~~---~- 203 (247)
T d1ixza_ 150 VMAATNRPD------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLA---------EDVD---L- 203 (247)
T ss_dssp EEEEESCGG------------GSCGGGGSTTSSCEEEEC-CSCCHHHHHHHHHHHHTTSCBC---------TTCC---H-
T ss_pred EEEeCCCcc------------ccCHhHcCCCCCcEEEEE-CCcCHHHHHHHHHHHhcccCCc---------cccC---H-
Confidence 999999864 34558884 99998888 5556555555555555332110 0001 1
Q ss_pred HHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 533 RYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 533 ~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+.|.+ . ....|.+.+..+++.|...|-.+.++.|+.+|+..|+
T Consensus 204 -------------------~~la~------~-----t~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 204 -------------------ALLAK------R-----TPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp -------------------HHHHH------T-----CTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred -------------------HHHHH------H-----CCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHhh
Confidence 11110 0 1234678889999988877777788999999999986
No 8
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.57 E-value=7.7e-15 Score=150.02 Aligned_cols=220 Identities=15% Similarity=0.134 Sum_probs=137.6
Q ss_pred hccccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceE
Q 006051 310 RGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTV 389 (663)
Q Consensus 310 ~si~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~ 389 (663)
+.+--.|+||+.+++++..++.... ......-++..++||+||||+|||.||+.+|+..+.+++...++.....-..
T Consensus 18 ~~L~~~viGQ~~a~~~v~~~v~~~~---~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~ 94 (315)
T d1r6bx3 18 DRLKMLVFGQDKAIEALTEAIKMAR---AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTV 94 (315)
T ss_dssp HHHTTTSCSCHHHHHHHHHHHHHHH---TTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCC
T ss_pred HHhCCeecChHHHHHHHHHHHHHHH---ccCCCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhh
Confidence 3445578999999999987764210 0011112333479999999999999999999999999888776654322111
Q ss_pred EEeecC--chh-----HhhhhhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCC
Q 006051 390 TAVKDG--GEW-----MLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPK 462 (663)
Q Consensus 390 ~~~~~~--~~~-----~~~~g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~ 462 (663)
+.+.+. |.. ..-.+.+.....+|+++||+++++++.++.|+++++.|.++.. .|... -..++.+|.|+|-.
T Consensus 95 ~~l~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~-~Gr~v-df~n~iiI~Tsnig 172 (315)
T d1r6bx3 95 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN-NGRKA-DFRNVVLVMTTNAG 172 (315)
T ss_dssp SSSCCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEET-TTEEE-ECTTEEEEEEECSS
T ss_pred hhhcccCCCccccccCChhhHHHHhCccchhhhcccccccchHhhhhHHhhccceecCC-CCCcc-CccceEEEeccchh
Confidence 112221 111 0112234456779999999999999999999999999998643 34333 34677899999963
Q ss_pred CC-C---------CCCC-ccc--cccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHH
Q 006051 463 GH-Y---------DPNL-SLS--VNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLA 529 (663)
Q Consensus 463 g~-~---------d~~~-~~~--~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~ 529 (663)
.. . +... ... ....++|.|++|+|.++.+.....++..+++ ...+..
T Consensus 173 ~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~-~~~l~~------------------- 232 (315)
T d1r6bx3 173 VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV-DKFIVE------------------- 232 (315)
T ss_dssp CC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHH-HHHHHH-------------------
T ss_pred hHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHH-HHHHHH-------------------
Confidence 10 0 0000 000 1124889999999998888665544443333 222211
Q ss_pred HHHHHHHHHHccCCCccCHHHHHHHHHH
Q 006051 530 MLRRYIYFVKGYFKPILTKEAEKVISSY 557 (663)
Q Consensus 530 ~l~~~i~~~r~~~~p~ls~ea~~~l~~~ 557 (663)
+.+- +....+...++++|.+.|...
T Consensus 233 -~~~~--l~~~~i~l~~~~~a~~~l~~~ 257 (315)
T d1r6bx3 233 -LQVQ--LDQKGVSLEVSQEARNWLAEK 257 (315)
T ss_dssp -HHHH--HHHTTEEEEECHHHHHHHHHH
T ss_pred -HHHH--HHhcCcchhhHHHHHHHHHHh
Confidence 1111 222345667899998887764
No 9
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.53 E-value=2.2e-14 Score=146.37 Aligned_cols=221 Identities=15% Similarity=0.128 Sum_probs=134.7
Q ss_pred hhccccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhc---CCceEEeCCCcccC
Q 006051 309 LRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLS---NRSVITTGLGSTSA 385 (663)
Q Consensus 309 ~~si~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~---~~~~~~~~~~~~~~ 385 (663)
-+.+--.|+||+.+++++..++..... ......++...+||+||||+|||.+|+.+|+.. ..+++..+++....
T Consensus 18 ~~~L~~~v~GQ~~ai~~v~~~i~~~~~---~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 18 EEELHKRVVGQDEAIRAVADAIRRARA---GLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp HHHHHHHSCSCHHHHHHHHHHHHHHGG---GCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCS
T ss_pred HHHhcCeEeCHHHHHHHHHHHHHHHhc---CCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEecccccc
Confidence 334455789999999888766642100 001112333468999999999999999999975 55677766655433
Q ss_pred CceEEEeecC-----ch--hHhhhhhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEe
Q 006051 386 GLTVTAVKDG-----GE--WMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGA 458 (663)
Q Consensus 386 gl~~~~~~~~-----~~--~~~~~g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaa 458 (663)
....+.+.+. |. ...-...+.....+|+++|||++++++.++.|+++|+.|.++.. .|... ...++.+|+|
T Consensus 95 ~~~~~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~-~gr~v-~~~~~i~i~t 172 (315)
T d1qvra3 95 KHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS-HGRTV-DFRNTVIILT 172 (315)
T ss_dssp SGGGGGC--------------CHHHHHHHCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCS-SSCCE-ECTTEEEEEE
T ss_pred chhhhhhcCCCCCCcCcccCChHHHHHHhCCCcEEEEehHhhcCHHHHHHHHHHhccCceeCC-CCcEe-cCcceEEEEe
Confidence 2221111111 10 00012233345579999999999999999999999999988643 23333 3467899999
Q ss_pred eCCCC--------CCCCCCc------cccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCC
Q 006051 459 TNPKG--------HYDPNLS------LSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTD 524 (663)
Q Consensus 459 tN~~g--------~~d~~~~------~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~ 524 (663)
+|-.. .+..... ......+.|+|++|||.++.+.....++..+++...+-.
T Consensus 173 snlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~--------------- 237 (315)
T d1qvra3 173 SNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSY--------------- 237 (315)
T ss_dssp CCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHH---------------
T ss_pred cccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHH---------------
Confidence 99621 0110000 011245899999999999988666655555444322211
Q ss_pred CCCHHHHHHHHHHHHccCCCccCHHHHHHHHHH
Q 006051 525 IWPLAMLRRYIYFVKGYFKPILTKEAEKVISSY 557 (663)
Q Consensus 525 ~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~ 557 (663)
+++ .+..+.+...+++++.+.|...
T Consensus 238 ------l~~--rl~~~~i~l~i~~~~~~~L~~~ 262 (315)
T d1qvra3 238 ------LRA--RLAEKRISLELTEAAKDFLAER 262 (315)
T ss_dssp ------HHH--HHHTTTCEEEECHHHHHHHHHH
T ss_pred ------HHH--HHHhccccccccHHHHHHHHHh
Confidence 111 1233446667889988877653
No 10
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.50 E-value=2.5e-13 Score=133.31 Aligned_cols=206 Identities=20% Similarity=0.162 Sum_probs=126.3
Q ss_pred ccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcc----------c
Q 006051 315 QVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGST----------S 384 (663)
Q Consensus 315 ~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~----------~ 384 (663)
++.|++.++..+.-.+..+ +.+.++||+||||+|||++|+.+++.........+.... .
T Consensus 13 dlig~~~~~~~L~~~i~~~-----------~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 13 DVVGQEHVLTALANGLSLG-----------RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp GSCSCHHHHHHHHHHHHTT-----------CCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred HccChHHHHHHHHHHHHcC-----------CCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcC
Confidence 8899999999988877664 122458999999999999999999864322111000000 0
Q ss_pred CCceEEEeecC---chh----HhhhhhhhhccC--CeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEE
Q 006051 385 AGLTVTAVKDG---GEW----MLEAGALVLADG--GLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTII 455 (663)
Q Consensus 385 ~gl~~~~~~~~---~~~----~~~~g~l~~a~~--gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~i 455 (663)
.......+... +.. ..+........+ -|++|||+|.|+...+++|+..||+. +.++.+
T Consensus 82 ~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~-------------~~~~~~ 148 (239)
T d1njfa_ 82 RFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKF 148 (239)
T ss_dssp CCTTEEEEETTCSSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSC-------------CTTEEE
T ss_pred CCCeEEEecchhcCCHHHHHHHHHHHHhccccCCCEEEEEECcccCCHHHHHHHHHHHhcC-------------CCCeEE
Confidence 00000111110 100 011101111222 38999999999999999999999963 345678
Q ss_pred EEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHH
Q 006051 456 FGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYI 535 (663)
Q Consensus 456 iaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i 535 (663)
|.+||.. ..+.+++.|||.. +.+.. ++.+.+++++
T Consensus 149 il~tn~~------------~~i~~~i~SRc~~-i~~~~--------------------------------~~~~~i~~~l 183 (239)
T d1njfa_ 149 LLATTDP------------QKLPVTILSRCLQ-FHLKA--------------------------------LDVEQIRHQL 183 (239)
T ss_dssp EEEESCG------------GGSCHHHHTTSEE-EECCC--------------------------------CCHHHHHHHH
T ss_pred EEEcCCc------------cccChhHhhhhcc-ccccc--------------------------------CcHHHhhhHH
Confidence 8888864 2566799999953 33322 2333333333
Q ss_pred HHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 536 YFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 536 ~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
...-..-...+++++.+.|.++ ..+++|.+.+++..+.+.+ .+.|+.+||.+++
T Consensus 184 ~~i~~~e~~~~~~~~l~~i~~~------------s~Gd~R~ain~l~~~~~~~----~~~I~~~~v~~~l 237 (239)
T d1njfa_ 184 EHILNEEHIAHEPRALQLLARA------------AEGSLRDALSLTDQAIASG----DGQVSTQAVSAML 237 (239)
T ss_dssp HHHHHHHTCCBCHHHHHHHHHH------------TTTCHHHHHHHHHHHHHHT----TTSBCHHHHHHHH
T ss_pred HHHHhhhccCCCHHHHHHHHHH------------cCCCHHHHHHHHHHHHHhC----CCCcCHHHHHHHh
Confidence 2222223456888888877664 2357898888887654433 4789999998765
No 11
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=9.5e-15 Score=145.26 Aligned_cols=165 Identities=19% Similarity=0.163 Sum_probs=99.1
Q ss_pred cccCchhHHHHHHHHHHhCC---ceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEE
Q 006051 314 PQVFGLFTVKLAVALTLIGG---VQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVT 390 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g---~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~ 390 (663)
.+|.|++.+|+.|.-.+... .......| ...+.++||+||||||||++++++++.+..+++....+.......
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g--~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~-- 79 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIG--VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA-- 79 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCC--CCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCT--
T ss_pred hhhccHHHHHHHHHHHHHHHhcCHHHHHhCC--CCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccccc--
Confidence 47899998887775543211 11111112 233467999999999999999999999999888764322111100
Q ss_pred EeecCchhHhh-h-hhhhhccCCeeecccccccChhhH-----------HhHHHHHHhceeeeeccCceeecCCcEEEEE
Q 006051 391 AVKDGGEWMLE-A-GALVLADGGLCCIDEFDSMREHDR-----------ATIHEAMEQQTISVAKAGLVTTLSTRTIIFG 457 (663)
Q Consensus 391 ~~~~~~~~~~~-~-g~l~~a~~gvl~iDEid~l~~~~~-----------~~L~~~me~~~i~i~k~g~~~~~~~~~~iia 457 (663)
+.+...+. . .......++|+||||+|.+..... ..++..++. ...+.++.|||
T Consensus 80 ---g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vlvi~ 145 (258)
T d1e32a2 80 ---GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG-----------LKQRAHVIVMA 145 (258)
T ss_dssp ---THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHT-----------CCCSSCEEEEE
T ss_pred ---ccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhcccccc-----------ccccCCccEEE
Confidence 00111111 0 011123568999999999853321 122222221 12355689999
Q ss_pred eeCCCCCCCCCCccccccCCChhhhh--hhhhhhhhcCCCChhHHHHHHHHHhh
Q 006051 458 ATNPKGHYDPNLSLSVNTTLSGPLLS--RFDIVLVLLDTKNPEWDAVVSSHILA 509 (663)
Q Consensus 458 atN~~g~~d~~~~~~~~~~l~~aLl~--RFdli~~l~d~~~~~~d~~i~~~il~ 509 (663)
|||.+.. +++++++ |||..+.+ +.|+.+.+..+.++.++
T Consensus 146 tTn~~~~------------ld~al~r~gRfd~~i~~-~~P~~~~R~~il~~~l~ 186 (258)
T d1e32a2 146 ATNRPNS------------IDPALRRFGRFDREVDI-GIPDATGRLEILQIHTK 186 (258)
T ss_dssp EESCGGG------------SCGGGTSTTSSCEEEEC-CCCCHHHHHHHHHHTTT
T ss_pred eCCCccc------------cchhhhhcccccceeEC-CCCCHHHHHHHhhhhcc
Confidence 9998744 4458888 99999988 56666665555555543
No 12
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.46 E-value=7e-14 Score=142.60 Aligned_cols=178 Identities=20% Similarity=0.273 Sum_probs=101.0
Q ss_pred hccccccCchhHHHHHHHHHHhCCceeecCCCCcc---ccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCC
Q 006051 310 RGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKV---RGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAG 386 (663)
Q Consensus 310 ~si~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~---r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~g 386 (663)
+.+--.|+||+.+|+++..++.....+. .-+... +++.++||+||||||||.||+++|+.+..+++....+.....
T Consensus 10 ~~L~~~ViGQd~A~~~l~~av~~~~~r~-~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~ 88 (309)
T d1ofha_ 10 SELDQHIIGQADAKRAVAIALRNRWRRM-QLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEV 88 (309)
T ss_dssp HHHHTTCCSCHHHHHHHHHHHHHHHHTT-SSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSC
T ss_pred HHhcCcccChHHHHHHHHHHHHHHHHHh-ccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccc
Confidence 3344578999999999987762100000 001111 144789999999999999999999999888877655432100
Q ss_pred ceEEEeecC----chhHhhhhhhh--hccCCeeecccccccChh------------hHHhHHHHHHhceeeeeccCceee
Q 006051 387 LTVTAVKDG----GEWMLEAGALV--LADGGLCCIDEFDSMREH------------DRATIHEAMEQQTISVAKAGLVTT 448 (663)
Q Consensus 387 l~~~~~~~~----~~~~~~~g~l~--~a~~gvl~iDEid~l~~~------------~~~~L~~~me~~~i~i~k~g~~~~ 448 (663)
- .+.... +.....++... ...++|+||||+|++.+. .++.|+..|+...++. +.... .
T Consensus 89 ~--~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~-~~~~i-~ 164 (309)
T d1ofha_ 89 G--YVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST-KHGMV-K 164 (309)
T ss_dssp C--SGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEE-TTEEE-E
T ss_pred e--eEeeeccccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEec-CCeEE-E
Confidence 0 000111 11112222211 123689999999998654 3455777776544432 22111 1
Q ss_pred cCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHH
Q 006051 449 LSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDA 501 (663)
Q Consensus 449 ~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~ 501 (663)
..++.++++.+.. . .....+.|+++.|||.++.+..+...+..+
T Consensus 165 -~s~ilfi~~ga~~----~----~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~ 208 (309)
T d1ofha_ 165 -TDHILFIASGAFQ----V----ARPSDLIPELQGRLPIRVELTALSAADFER 208 (309)
T ss_dssp -CTTCEEEEEECCS----S----SCGGGSCHHHHHTCCEEEECCCCCHHHHHH
T ss_pred -ccceeEEeccchh----h----cCcccchhhhhhhhheeeeccCCCHHHHHH
Confidence 2344556553321 0 011346789999999988885544444333
No 13
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.43 E-value=4.3e-13 Score=139.08 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=136.3
Q ss_pred HhhccccccCchhHHHHHHHHHHhCCceee-----cC-------------CCCccccccccccccCCCchHHHHHHHHHH
Q 006051 308 ILRGICPQVFGLFTVKLAVALTLIGGVQHV-----DA-------------SGTKVRGESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 308 l~~si~p~i~G~~~~K~aill~l~~g~~~~-----~~-------------~~~~~r~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
|.+.+.-.|+||+.+|+++..++..-.++. .. .+..-++..|+||+||+|+|||.+||++|+
T Consensus 11 i~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~ 90 (364)
T d1um8a_ 11 LKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAK 90 (364)
T ss_dssp HHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred HHHHhCCeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHh
Confidence 444455579999999999998874210000 00 001123567899999999999999999999
Q ss_pred hcCCceEEeCCCcc-cCCceEEEeecC-chh-HhhhhhhhhccCCeeecccccc--------------cChhhHHhHHHH
Q 006051 370 LSNRSVITTGLGST-SAGLTVTAVKDG-GEW-MLEAGALVLADGGLCCIDEFDS--------------MREHDRATIHEA 432 (663)
Q Consensus 370 ~~~~~~~~~~~~~~-~~gl~~~~~~~~-~~~-~~~~g~l~~a~~gvl~iDEid~--------------l~~~~~~~L~~~ 432 (663)
.+..++........ ..|.......+. ... ...+|.+..+..||+++||+++ ..++.++.|++.
T Consensus 91 ~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqi 170 (364)
T d1um8a_ 91 HLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKI 170 (364)
T ss_dssp HTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHH
T ss_pred hcccceeehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhh
Confidence 99888876654432 222221111000 111 1113345567889999999999 556789999999
Q ss_pred HHhceeeeeccCceeecCCcEEEEEeeCCC----C------------------CCCCCCc-------c--------cccc
Q 006051 433 MEQQTISVAKAGLVTTLSTRTIIFGATNPK----G------------------HYDPNLS-------L--------SVNT 475 (663)
Q Consensus 433 me~~~i~i~k~g~~~~~~~~~~iiaatN~~----g------------------~~d~~~~-------~--------~~~~ 475 (663)
|+.+.+.+...+....-..++.++.++|-. | .|..... . ....
T Consensus 171 ld~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T d1um8a_ 171 VEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTY 250 (364)
T ss_dssp HHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHT
T ss_pred hcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhh
Confidence 998777664433222222233344444430 0 0110000 0 0123
Q ss_pred CCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHH-HccCCCccCHHHHHHH
Q 006051 476 TLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFV-KGYFKPILTKEAEKVI 554 (663)
Q Consensus 476 ~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-r~~~~p~ls~ea~~~l 554 (663)
.+.|.|+.|||.++.+.....++..+++. ... ...+++|-... .+.+.-.++++|.+.|
T Consensus 251 ~f~PEf~gRi~~iv~f~~L~~~~l~~Il~-----~~~---------------~~l~kq~~~~l~~~gi~L~~td~a~~~l 310 (364)
T d1um8a_ 251 GLIPELIGRLPVLSTLDSISLEAMVDILQ-----KPK---------------NALIKQYQQLFKMDEVDLIFEEEAIKEI 310 (364)
T ss_dssp TCCHHHHTTCCEEEECCCCCHHHHHHHHH-----SST---------------TCHHHHHHHHHHTTTCEEEECHHHHHHH
T ss_pred hhHHHHHHHhcchhhHhhhhHHHHHHHHH-----HHH---------------HHHHHHHHHHHHhCCcEEEECHHHHHHH
Confidence 47899999999999986665555444332 111 02344554332 2356778999999988
Q ss_pred HHHHHHHHhcccCCCccccHhHHHHHHH
Q 006051 555 SSYYQLQRRSATQNAARTTVRMLESLIR 582 (663)
Q Consensus 555 ~~~y~~~r~~~~~~~~~~t~R~Le~lir 582 (663)
.+..... .+-.|.|.++|.
T Consensus 311 a~~g~d~---------~~GAR~L~riie 329 (364)
T d1um8a_ 311 AQLALER---------KTGARGLRAIIE 329 (364)
T ss_dssp HHHHHHT---------TCTGGGHHHHHH
T ss_pred HHhccCC---------CCCchHHHHHHH
Confidence 8643221 223677777764
No 14
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.43 E-value=1.5e-13 Score=133.74 Aligned_cols=204 Identities=21% Similarity=0.182 Sum_probs=129.5
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCC-----ceEEeCCCcccCCce
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNR-----SVITTGLGSTSAGLT 388 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~-----~~~~~~~~~~~~gl~ 388 (663)
.+++|++.+++.+.-.+-.+ ...|+||+||||+|||++++++++.... .++..... ...+..
T Consensus 14 ~divg~~~~~~~L~~~i~~~------------~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~-~~~~~~ 80 (227)
T d1sxjc2 14 DEVYGQNEVITTVRKFVDEG------------KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNAS-DDRGID 80 (227)
T ss_dssp GGCCSCHHHHHHHHHHHHTT------------CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTT-SCCSHH
T ss_pred HHccCcHHHHHHHHHHHHcC------------CCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEeccc-ccCCee
Confidence 47899999999887777553 1247999999999999999999986421 11221111 100000
Q ss_pred EEEeecCchhHhhh---hhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCCC
Q 006051 389 VTAVKDGGEWMLEA---GALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGHY 465 (663)
Q Consensus 389 ~~~~~~~~~~~~~~---g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~~ 465 (663)
......... ..+.....-+++|||++.+....+.+|+.+|+... ..+.++.++|..
T Consensus 81 -----~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~-------------~~~~~~~~~~~~--- 139 (227)
T d1sxjc2 81 -----VVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYT-------------KNTRFCVLANYA--- 139 (227)
T ss_dssp -----HHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTT-------------TTEEEEEEESCG---
T ss_pred -----eeecchhhccccccccCCCeEEEEEeccccchhhHHHHHHHHhhhcc-------------cceeeccccCcH---
Confidence 000000000 00011122499999999999999999999998642 355777888865
Q ss_pred CCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCc
Q 006051 466 DPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPI 545 (663)
Q Consensus 466 d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ 545 (663)
..+.+++++||.. +.+.. ++.+.+.+++...-..-.-.
T Consensus 140 ---------~~i~~~i~sr~~~-i~~~~--------------------------------~~~~~i~~~l~~I~~~e~i~ 177 (227)
T d1sxjc2 140 ---------HKLTPALLSQCTR-FRFQP--------------------------------LPQEAIERRIANVLVHEKLK 177 (227)
T ss_dssp ---------GGSCHHHHTTSEE-EECCC--------------------------------CCHHHHHHHHHHHHHTTTCC
T ss_pred ---------HHhHHHHHHHHhh-hcccc--------------------------------cccccccccccccccccccc
Confidence 2566789999853 33322 34445555554332233446
Q ss_pred cCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 546 LTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 546 ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+++++.+.|.+.. .+++|.+.+++..+...+.....+.|+.++|.+|+
T Consensus 178 i~~~~l~~i~~~s------------~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 178 LSPNAEKALIELS------------NGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 225 (227)
T ss_dssp BCHHHHHHHHHHH------------TTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHT
T ss_pred CCHHHHHHHHHHc------------CCcHHHHHHHHHHHHHhcCCCCCCeeCHHHHHHHh
Confidence 7888887777652 24688887877766666666667889999998875
No 15
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.38 E-value=7.2e-13 Score=129.19 Aligned_cols=199 Identities=17% Similarity=0.173 Sum_probs=123.0
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCC-----ceEEeCCCcccCCc
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNR-----SVITTGLGSTSAGL 387 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~-----~~~~~~~~~~~~gl 387 (663)
..+|.|++.++..+.-.+-.+ ...|+||+||||+|||++|+++++.... .++....+. ..+
T Consensus 23 ~~diig~~~~~~~l~~~i~~~------------~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~-~~~- 88 (231)
T d1iqpa2 23 LDDIVGQEHIVKRLKHYVKTG------------SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASD-ERG- 88 (231)
T ss_dssp TTTCCSCHHHHHHHHHHHHHT------------CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTC-HHH-
T ss_pred HHHccCcHHHHHHHHHHHHcC------------CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCc-ccc-
Confidence 358999999999988888654 1257999999999999999999985432 222211110 000
Q ss_pred eEEEeecCchhHhhh---hhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCC
Q 006051 388 TVTAVKDGGEWMLEA---GALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGH 464 (663)
Q Consensus 388 ~~~~~~~~~~~~~~~---g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~ 464 (663)
........... .........|+++||++.+....+..|+..|+... ..+.+++++|..
T Consensus 89 ----~~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~-------------~~~~~i~~~n~~-- 149 (231)
T d1iqpa2 89 ----INVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-- 149 (231)
T ss_dssp ----HHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTT-------------TTEEEEEEESCG--
T ss_pred ----hhHHHHHHHHHHhhhhccCCCceEEeehhhhhcchhHHHHHhhhcccCC-------------cceEEEeccCCh--
Confidence 00000000000 11122456799999999999999999999998754 345788888875
Q ss_pred CCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCC
Q 006051 465 YDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKP 544 (663)
Q Consensus 465 ~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p 544 (663)
..+.+++.+||.. +.+.. +. .+.+..++...-.....
T Consensus 150 ----------~~i~~~l~sR~~~-i~~~~-~~-------------------------------~~~~~~~l~~~~~~e~i 186 (231)
T d1iqpa2 150 ----------SKIIEPIQSRCAI-FRFRP-LR-------------------------------DEDIAKRLRYIAENEGL 186 (231)
T ss_dssp ----------GGSCHHHHHTEEE-EECCC-CC-------------------------------HHHHHHHHHHHHHTTTC
T ss_pred ----------hhchHhHhCcccc-ccccc-cc-------------------------------hhhHHHHHHHHHHHhCC
Confidence 2456799999964 33322 22 22222222221112234
Q ss_pred ccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHH
Q 006051 545 ILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITA 604 (663)
Q Consensus 545 ~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~A 604 (663)
.+++++.+.|.+.+ .+++|.+.++++.+ +. +.+.++.++|..+
T Consensus 187 ~i~~~~l~~I~~~~------------~gdiR~ai~~Lq~~---~~--~~~~it~e~v~~v 229 (231)
T d1iqpa2 187 ELTEEGLQAILYIA------------EGDMRRAINILQAA---AA--LDKKITDENVFMV 229 (231)
T ss_dssp EECHHHHHHHHHHH------------TTCHHHHHHHHHHH---HT--TCSEECHHHHHHH
T ss_pred CCCHHHHHHHHHHc------------CCCHHHHHHHHHHH---HH--cCCCcCHHHHHhh
Confidence 57788777776652 23578877776644 22 3678899888654
No 16
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.34 E-value=4.3e-12 Score=123.83 Aligned_cols=209 Identities=17% Similarity=0.138 Sum_probs=124.0
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhc------CCceEEeCCCcccCCc
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLS------NRSVITTGLGSTSAGL 387 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~------~~~~~~~~~~~~~~gl 387 (663)
.+++|++.+++.+.-.+-++ ...|+||+||||+|||++++++++.. ....+..+.+. ..+.
T Consensus 12 ~diig~~~~~~~l~~~i~~~------------~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~-~~~~ 78 (237)
T d1sxjd2 12 DEVTAQDHAVTVLKKTLKSA------------NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD-ERGI 78 (237)
T ss_dssp TTCCSCCTTHHHHHHHTTCT------------TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSS-CCCH
T ss_pred HHccCcHHHHHHHHHHHHcC------------CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccc-cccc
Confidence 47899999988887776543 12579999999999999999999853 12222222111 1111
Q ss_pred eE--EEeecCchhH-hhhh-----hhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEee
Q 006051 388 TV--TAVKDGGEWM-LEAG-----ALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGAT 459 (663)
Q Consensus 388 ~~--~~~~~~~~~~-~~~g-----~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaat 459 (663)
.. ....+..... ...+ ........|++|||++.+....++.++..++... ..+.++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~-------------~~~~~i~~~ 145 (237)
T d1sxjd2 79 SIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS-------------GVTRFCLIC 145 (237)
T ss_dssp HHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTT-------------TTEEEEEEE
T ss_pred hHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHHHHHHhhcccccc-------------ccccccccc
Confidence 00 0000000000 0000 0011123489999999999999999999888643 344666677
Q ss_pred CCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 006051 460 NPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVK 539 (663)
Q Consensus 460 N~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r 539 (663)
|.. ..+.+++.+||- .+.+.. ++.+.+.+++...-
T Consensus 146 ~~~------------~~~~~~l~sr~~-~i~f~~--------------------------------~~~~~~~~~L~~i~ 180 (237)
T d1sxjd2 146 NYV------------TRIIDPLASQCS-KFRFKA--------------------------------LDASNAIDRLRFIS 180 (237)
T ss_dssp SCG------------GGSCHHHHHHSE-EEECCC--------------------------------CCHHHHHHHHHHHH
T ss_pred ccc------------ccccccccchhh-hhcccc--------------------------------ccccccchhhhhhh
Confidence 654 245578999983 344422 23333444443322
Q ss_pred ccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccC-CCccChhhHHHHH
Q 006051 540 GYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMF-RNEVTRLDAITAI 605 (663)
Q Consensus 540 ~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~-~~~V~~~Dv~~Ai 605 (663)
..-...+++++.+.|.+.. .+++|...++++.+...+.... .+.|+.++|.++.
T Consensus 181 ~~e~i~i~~~~l~~ia~~s------------~gd~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 181 EQENVKCDDGVLERILDIS------------AGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 235 (237)
T ss_dssp HTTTCCCCHHHHHHHHHHT------------SSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHH
T ss_pred hhhcCcCCHHHHHHHHHHc------------CCCHHHHHHHHHHHHHhchhcCCCCccCHHHHHHhh
Confidence 2223357888887776651 3468887777776666665443 4678999998775
No 17
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.34 E-value=6e-12 Score=121.94 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=121.9
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCc-----eEEeCCCcccCCce
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRS-----VITTGLGSTSAGLT 388 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~-----~~~~~~~~~~~gl~ 388 (663)
.++.|++.++..+.-.+-.+ ...|+||+||||+|||++|+.+++..... ++...... ..+..
T Consensus 15 ~d~ig~~~~~~~L~~~~~~~------------~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~-~~~~~ 81 (224)
T d1sxjb2 15 SDIVGNKETIDRLQQIAKDG------------NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD-DRGID 81 (224)
T ss_dssp GGCCSCTHHHHHHHHHHHSC------------CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTS-CCSHH
T ss_pred HHhcCCHHHHHHHHHHHHcC------------CCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccc-cCCce
Confidence 47899999998888877654 12579999999999999999999754321 22222111 10000
Q ss_pred EEEeecC-chhHhhhhhhhhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCCCCC
Q 006051 389 VTAVKDG-GEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGHYDP 467 (663)
Q Consensus 389 ~~~~~~~-~~~~~~~g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~~d~ 467 (663)
..... ................++++||++.+....+.+|+..|+... ..+.++.++|..
T Consensus 82 --~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~-------------~~~~~i~~~~~~----- 141 (224)
T d1sxjb2 82 --VVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS-------------NSTRFAFACNQS----- 141 (224)
T ss_dssp --HHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTT-------------TTEEEEEEESCG-----
T ss_pred --ehhhHHHHHHHhhccCCCcceEEEEEecccccchhHHHHHhhhccccc-------------cceeeeeccCch-----
Confidence 00000 000000000011234599999999999999999999998743 355777778764
Q ss_pred CCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCccC
Q 006051 468 NLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPILT 547 (663)
Q Consensus 468 ~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ls 547 (663)
..+.+++++||.. +.+.. .+.+.+.+++...-+.-...++
T Consensus 142 -------~~i~~~l~sr~~~-i~~~~--------------------------------~~~~~i~~~l~~i~~~e~~~i~ 181 (224)
T d1sxjb2 142 -------NKIIEPLQSQCAI-LRYSK--------------------------------LSDEDVLKRLLQIIKLEDVKYT 181 (224)
T ss_dssp -------GGSCHHHHTTSEE-EECCC--------------------------------CCHHHHHHHHHHHHHHHTCCBC
T ss_pred -------hhhhhHHHHHHHH-hhhcc--------------------------------cchhhhHHHHHHHHHhcccCCC
Confidence 2566799999954 44422 3334444444332222244678
Q ss_pred HHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 548 KEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 548 ~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+++.+.|.... .+++|.+.++++.+.+ ..+.++.++|.+++
T Consensus 182 ~~~l~~I~~~s------------~Gd~R~ai~~Lq~~~~-----~~~~i~~~~i~~~~ 222 (224)
T d1sxjb2 182 NDGLEAIIFTA------------EGDMRQAINNLQSTVA-----GHGLVNADNVFKIV 222 (224)
T ss_dssp HHHHHHHHHHH------------TTCHHHHHHHHHHHHH-----HHSSBCHHHHHHHH
T ss_pred HHHHHHHHHHc------------CCcHHHHHHHHHHHHH-----cCCCcCHHHHHHHh
Confidence 88777776552 3457777666664322 23567877776544
No 18
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.28 E-value=2.4e-13 Score=135.36 Aligned_cols=161 Identities=20% Similarity=0.182 Sum_probs=92.5
Q ss_pred ccccCchhHHHHHHHHHHhCCce---eecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceE
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQ---HVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTV 389 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~---~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~ 389 (663)
+-+|.|++.+|+.|.-.+..... .....| .....+|||+||||||||++++++|..++.+++....+......
T Consensus 6 f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g--~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~-- 81 (265)
T d1r7ra3 6 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFG--MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW-- 81 (265)
T ss_dssp CSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCC--CCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC--
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCC--CCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhcc--
Confidence 34688888777776654432111 111112 23346799999999999999999999999998876532211100
Q ss_pred EEeecCchhHhh--hhhhhhccCCeeecccccccChhh--------------HHhHHHHHHhceeeeeccCceeecCCcE
Q 006051 390 TAVKDGGEWMLE--AGALVLADGGLCCIDEFDSMREHD--------------RATIHEAMEQQTISVAKAGLVTTLSTRT 453 (663)
Q Consensus 390 ~~~~~~~~~~~~--~g~l~~a~~gvl~iDEid~l~~~~--------------~~~L~~~me~~~i~i~k~g~~~~~~~~~ 453 (663)
.+..+..+. ........++|++|||+|.+-... .+.++..|+. .. -+.++
T Consensus 82 ---~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~---------~~--~~~~v 147 (265)
T d1r7ra3 82 ---FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDG---------MS--TKKNV 147 (265)
T ss_dssp ---TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC-----------------CC
T ss_pred ---ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhC---------cC--CCCCE
Confidence 011111111 011112357899999999874321 1222222221 11 12356
Q ss_pred EEEEeeCCCCCCCCCCccccccCCChhhhh--hhhhhhhhcCCCChhHHHHH
Q 006051 454 IIFGATNPKGHYDPNLSLSVNTTLSGPLLS--RFDIVLVLLDTKNPEWDAVV 503 (663)
Q Consensus 454 ~iiaatN~~g~~d~~~~~~~~~~l~~aLl~--RFdli~~l~d~~~~~~d~~i 503 (663)
.+|||||.... +++++++ |||..+.+..+..++...++
T Consensus 148 ~vi~ttn~~~~------------ld~al~r~gRf~~~i~~~~p~~~~R~~il 187 (265)
T d1r7ra3 148 FIIGATNRPDI------------IDPAILRPGRLDQLIYIPLPDEKSRVAIL 187 (265)
T ss_dssp EEEECCBSCTT------------TSCGGGSSTTSEEEEECCCCCCHHHHHHH
T ss_pred EEEEeCCCchh------------CCHHHhCCCCccEEEEecchHHHHHHHHH
Confidence 89999998744 4458876 99999988555544444433
No 19
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.21 E-value=4.4e-11 Score=117.68 Aligned_cols=198 Identities=18% Similarity=0.169 Sum_probs=111.8
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHh----------cCCceEEeCCCc
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKL----------SNRSVITTGLGS 382 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~----------~~~~~~~~~~~~ 382 (663)
.+.++|.+.-...++-.|... ...|+||+||||+|||.+++.+++. ..+.++....++
T Consensus 17 ld~~igRd~Ei~~l~~iL~r~------------~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~ 84 (268)
T d1r6bx2 17 IDPLIGREKELERAIQVLCRR------------RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 84 (268)
T ss_dssp SCCCCSCHHHHHHHHHHHTSS------------SSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC-
T ss_pred CCcccChHHHHHHHHHHHhcC------------ccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeech
Confidence 345789887777777767542 2368999999999999999999974 233455544443
Q ss_pred ccCCceEEEeecCchhHhhhhhh----hhccCCeeecccccccCh---------hhHHhHHHHHHhceeeeeccCceeec
Q 006051 383 TSAGLTVTAVKDGGEWMLEAGAL----VLADGGLCCIDEFDSMRE---------HDRATIHEAMEQQTISVAKAGLVTTL 449 (663)
Q Consensus 383 ~~~gl~~~~~~~~~~~~~~~g~l----~~a~~gvl~iDEid~l~~---------~~~~~L~~~me~~~i~i~k~g~~~~~ 449 (663)
..+|. +..|+|...--.+ ..+.+.|+||||++.+-. +.-+.|..++..|.+
T Consensus 85 liag~-----~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i----------- 148 (268)
T d1r6bx2 85 LLAGT-----KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI----------- 148 (268)
T ss_dssp --CCC-----CCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCC-----------
T ss_pred HhccC-----ccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhCCCC-----------
Confidence 33322 2235665432222 234557999999998721 122333344554444
Q ss_pred CCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHH
Q 006051 450 STRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLA 529 (663)
Q Consensus 450 ~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~ 529 (663)
.+||+|.|. .+..-+.-.++|.+||..+. + +.++.+....|...+...... ...-.++.+
T Consensus 149 ----~vIgatT~e-------ey~~~~e~d~al~rrF~~I~-V-~Eps~e~t~~IL~~~~~~~e~-------~h~v~~~~~ 208 (268)
T d1r6bx2 149 ----RVIGSTTYQ-------EFSNIFEKDRALARRFQKID-I-TEPSIEETVQIINGLKPKYEA-------HHDVRYTAK 208 (268)
T ss_dssp ----EEEEEECHH-------HHHCCCCCTTSSGGGEEEEE-C-CCCCHHHHHHHHHHHHHHHHH-------HHTCCCCHH
T ss_pred ----eEEEeCCHH-------HHHHHHhhcHHHHhhhcccc-c-CCCCHHHHHHHHHHhhHHHhc-------cCCEEeChH
Confidence 899999985 12222344568999998655 3 444444433333322221110 011235666
Q ss_pred HHHHHHHHHHccCCC-ccCHHHHHHHHHHH
Q 006051 530 MLRRYIYFVKGYFKP-ILTKEAEKVISSYY 558 (663)
Q Consensus 530 ~l~~~i~~~r~~~~p-~ls~ea~~~l~~~y 558 (663)
.++..+.++.+++.- .+++.|.++|....
T Consensus 209 al~~~v~ls~ryi~~~~~PdKAIdllDea~ 238 (268)
T d1r6bx2 209 AVRAAVELAVKYINDRHLPDKAIDVIDEAG 238 (268)
T ss_dssp HHHHHHHHHHHHCTTSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 666666666655432 25556666655443
No 20
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.15 E-value=7.8e-11 Score=115.77 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=84.8
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCce---EEeCC----------
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSV---ITTGL---------- 380 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~---~~~~~---------- 380 (663)
.++.|++.+++.+.-.+..+ +...|+||+||||||||++++++++...... .....
T Consensus 11 ~diig~~~~~~~L~~~~~~~-----------~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (252)
T d1sxje2 11 NALSHNEELTNFLKSLSDQP-----------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRK 79 (252)
T ss_dssp GGCCSCHHHHHHHHTTTTCT-----------TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC---------------
T ss_pred HHccCcHHHHHHHHHHHHcC-----------CCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccch
Confidence 37899999988886555432 1225799999999999999999998531100 00000
Q ss_pred ---CcccCCceEEEeec-----Cch--h-Hhhh----hhh--------hhccCCeeecccccccChhhHHhHHHHHHhce
Q 006051 381 ---GSTSAGLTVTAVKD-----GGE--W-MLEA----GAL--------VLADGGLCCIDEFDSMREHDRATIHEAMEQQT 437 (663)
Q Consensus 381 ---~~~~~gl~~~~~~~-----~~~--~-~~~~----g~l--------~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~ 437 (663)
.............. ... . .... ..+ ......+++|||+|.+....++.|+..|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~- 158 (252)
T d1sxje2 80 LELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKY- 158 (252)
T ss_dssp ---CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHS-
T ss_pred hhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccccchhhhcccccc-
Confidence 00000000000000 000 0 0000 000 0112348999999999999999999999863
Q ss_pred eeeeccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCC
Q 006051 438 ISVAKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTK 495 (663)
Q Consensus 438 i~i~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~ 495 (663)
+.++.+|++||... .+.+++++||. ++.+..+.
T Consensus 159 ------------~~~~~~Il~tn~~~------------~i~~~l~sR~~-~i~~~~~~ 191 (252)
T d1sxje2 159 ------------SKNIRLIMVCDSMS------------PIIAPIKSQCL-LIRCPAPS 191 (252)
T ss_dssp ------------TTTEEEEEEESCSC------------SSCHHHHTTSE-EEECCCCC
T ss_pred ------------cccccceeeecccc------------chhhhhhcchh-eeeecccc
Confidence 34567888898752 46679999994 55553333
No 21
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.10 E-value=9.2e-10 Score=108.77 Aligned_cols=241 Identities=10% Similarity=-0.020 Sum_probs=130.6
Q ss_pred hhccccc-cCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCc----eEEeCCCcc
Q 006051 309 LRGICPQ-VFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRS----VITTGLGST 383 (663)
Q Consensus 309 ~~si~p~-i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~----~~~~~~~~~ 383 (663)
..+-.|+ +.|.+.-.+.+.-.|..+... .-....|+||+||||||||++++.+++.+... ++.......
T Consensus 10 ~~~y~p~~l~~Re~ei~~l~~~l~~~l~~------~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~ 83 (276)
T d1fnna2 10 SPSYVPKRLPHREQQLQQLDILLGNWLRN------PGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIY 83 (276)
T ss_dssp STTCCCSCCTTCHHHHHHHHHHHHHHHHS------TTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhC------CCCCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhh
Confidence 3444554 778776555555444321110 01234689999999999999999999875421 111111100
Q ss_pred c------------CCceEEEeecCchhHhhhhhh-----hhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCce
Q 006051 384 S------------AGLTVTAVKDGGEWMLEAGAL-----VLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLV 446 (663)
Q Consensus 384 ~------------~gl~~~~~~~~~~~~~~~g~l-----~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~ 446 (663)
. .+.... ..........+.+ ......+.++|+++.+.......+...++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-------- 153 (276)
T d1fnna2 84 RNFTAIIGEIARSLNIPFP--RRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADK-------- 153 (276)
T ss_dssp CSHHHHHHHHHHHTTCCCC--SSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHH--------
T ss_pred hhhhhhhhhhHHhhhhhhh--hhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhcccc--------
Confidence 0 000000 0000000001111 112345778999999887766666555443211
Q ss_pred eecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhh-hhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCC
Q 006051 447 TTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIV-LVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDI 525 (663)
Q Consensus 447 ~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli-~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~ 525 (663)
.....+.+++++|....+ ..+.+++.+|+... +.+..+..++...++..
T Consensus 154 -~~~~~~~~i~~~~~~~~~---------~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~-------------------- 203 (276)
T d1fnna2 154 -LGAFRIALVIVGHNDAVL---------NNLDPSTRGIMGKYVIRFSPYTKDQIFDILLD-------------------- 203 (276)
T ss_dssp -HSSCCEEEEEEESSTHHH---------HTSCHHHHHHHTTCEEECCCCBHHHHHHHHHH--------------------
T ss_pred -ccccceEEeecCCchhhh---------hhcchhhhhhhcchhccccchhHHHHHHHHHH--------------------
Confidence 113456788888875211 13456777776533 22322222222222211
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
.+..+ .....+++++.+.|.++..... ......+++|...++++.|...|..+.+..|+.+|+.+|.
T Consensus 204 --------r~~~~--~~~~~~~~~~l~~ia~~~~~~~---~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~ 270 (276)
T d1fnna2 204 --------RAKAG--LAEGSYSEDILQMIADITGAQT---PLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSS 270 (276)
T ss_dssp --------HHHHH--BCTTSSCHHHHHHHHHHHSBSS---TTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred --------HHHHh--cccccccHHHHHHHHHHhhhhh---hhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHH
Confidence 11111 1234577888877776532110 1113457899999999999999999999999999999998
Q ss_pred HHH
Q 006051 606 LCI 608 (663)
Q Consensus 606 ~l~ 608 (663)
+-+
T Consensus 271 ~~~ 273 (276)
T d1fnna2 271 KEV 273 (276)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 22
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.09 E-value=1.1e-11 Score=121.51 Aligned_cols=121 Identities=15% Similarity=0.184 Sum_probs=72.6
Q ss_pred ccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEeecCchhHhhhhhhh---hccCCeeecccccccCh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALV---LADGGLCCIDEFDSMRE 423 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l~---~a~~gvl~iDEid~l~~ 423 (663)
..+|||+||||||||++|+++|+.++.+++.........|... ......+ ...+. ...++|+||||+|.+..
T Consensus 40 ~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~----~~~~~~i-~~if~~A~~~~p~il~iDEid~l~~ 114 (246)
T d1d2na_ 40 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSE----TAKCQAM-KKIFDDAYKSQLSCVVVDDIERLLD 114 (246)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCH----HHHHHHH-HHHHHHHHTSSEEEEEECCHHHHTT
T ss_pred CeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccc----cchhhhh-hhhhhhhhhcccceeehhhhhhHhh
Confidence 3679999999999999999999999999887644332222210 0000001 11222 23458999999998632
Q ss_pred ----------hhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcC
Q 006051 424 ----------HDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLD 493 (663)
Q Consensus 424 ----------~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d 493 (663)
.....|+..|+... ....++.||||||.+...|+ ..+.+||+..+.+++
T Consensus 115 ~~~~~~~~~~~~~~~ll~~l~~~~----------~~~~~v~vi~tTn~~~~ld~-----------~~~~~rF~~~i~~P~ 173 (246)
T d1d2na_ 115 YVPIGPRFSNLVLQALLVLLKKAP----------PQGRKLLIIGTTSRKDVLQE-----------MEMLNAFSTTIHVPN 173 (246)
T ss_dssp CBTTTTBCCHHHHHHHHHHTTCCC----------STTCEEEEEEEESCHHHHHH-----------TTCTTTSSEEEECCC
T ss_pred hcccccchhHHHHHHHHHHhcCCC----------ccccceeeeeccCChhhccc-----------hhhcCccceEEecCC
Confidence 12234444444221 11345789999997522111 136789998887633
No 23
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.01 E-value=5.3e-10 Score=115.97 Aligned_cols=203 Identities=19% Similarity=0.212 Sum_probs=117.9
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHh----------cCCceEEeCCCc
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKL----------SNRSVITTGLGS 382 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~----------~~~~~~~~~~~~ 382 (663)
.+-++|.+.-...++-.|.. ++..|+||+||||+|||.++..+|+. .++.++....+.
T Consensus 21 ld~~~gr~~ei~~~~~~L~r------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~ 88 (387)
T d1qvra2 21 LDPVIGRDEEIRRVIQILLR------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGS 88 (387)
T ss_dssp SCCCCSCHHHHHHHHHHHHC------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC--
T ss_pred CCCCcCcHHHHHHHHHHHhc------------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhh
Confidence 34577888666666666653 23478999999999999999888863 223456555544
Q ss_pred ccCCceEEEeecCchhHhhhhhh----hhccC-CeeecccccccC--------hhhHHhHHHHHHhceeeeeccCceeec
Q 006051 383 TSAGLTVTAVKDGGEWMLEAGAL----VLADG-GLCCIDEFDSMR--------EHDRATIHEAMEQQTISVAKAGLVTTL 449 (663)
Q Consensus 383 ~~~gl~~~~~~~~~~~~~~~g~l----~~a~~-gvl~iDEid~l~--------~~~~~~L~~~me~~~i~i~k~g~~~~~ 449 (663)
..+|.. ..|+|...--.+ ..+.+ .|+||||+..+- .+.-+.|..+|..|.+
T Consensus 89 l~ag~~-----~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~----------- 152 (387)
T d1qvra2 89 LLAGAK-----YRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGEL----------- 152 (387)
T ss_dssp --------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCC-----------
T ss_pred hhcccC-----cchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhCCCc-----------
Confidence 333322 225554332222 12333 379999999972 2344567778887776
Q ss_pred CCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHH
Q 006051 450 STRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEGGLSEEKDTEPLTDIWPLA 529 (663)
Q Consensus 450 ~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~ 529 (663)
.+||||.|. .++. +.-.++|.+||..+. + +.|+.+....|...+...... ...-.++.+
T Consensus 153 ----~~I~~tT~~-------ey~~-~e~d~al~rrF~~v~-v-~ep~~~~~~~il~~~~~~~e~-------~h~v~~~~~ 211 (387)
T d1qvra2 153 ----RLIGATTLD-------EYRE-IEKDPALERRFQPVY-V-DEPTVEETISILRGLKEKYEV-------HHGVRISDS 211 (387)
T ss_dssp ----CEEEEECHH-------HHHH-HTTCTTTCSCCCCEE-E-CCCCHHHHHHHHHHHHHHHHH-------HTTCEECHH
T ss_pred ----ceeeecCHH-------HHHH-hcccHHHHHhccccc-C-CCCcHHHHHHHHHHHHHHHHh-------ccCCcccHH
Confidence 789999885 1111 233578999998655 3 455544444443333322211 112347889
Q ss_pred HHHHHHHHHHccCCCc-cCHHHHHHHHHHHHHHHhc
Q 006051 530 MLRRYIYFVKGYFKPI-LTKEAEKVISSYYQLQRRS 564 (663)
Q Consensus 530 ~l~~~i~~~r~~~~p~-ls~ea~~~l~~~y~~~r~~ 564 (663)
.+...+..+.+++.-. +++.|.++|.......|..
T Consensus 212 ai~~~v~ls~ryi~~r~~PdKAidlld~a~a~~~i~ 247 (387)
T d1qvra2 212 AIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMA 247 (387)
T ss_dssp HHHHHHHHHHHHCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcccccccccChhhHHHHHHHHHHHHHhh
Confidence 9999999998876544 7888999999887766653
No 24
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.96 E-value=3.7e-10 Score=112.37 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=43.7
Q ss_pred ccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHH
Q 006051 545 ILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAIL 606 (663)
Q Consensus 545 ~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~ 606 (663)
.+++++.+++.+...... ...+.+|....+++.|...|..+.+..|+++||.+|+.
T Consensus 230 ~~~~~al~~ia~~~~~~~------~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~ 285 (287)
T d1w5sa2 230 VWEPRHLELISDVYGEDK------GGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVS 285 (287)
T ss_dssp SCCHHHHHHHHHHHCGGG------TSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccc------cCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 477888888776532111 23457999999999999999999999999999999984
No 25
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.95 E-value=4.2e-09 Score=103.16 Aligned_cols=123 Identities=16% Similarity=0.132 Sum_probs=69.8
Q ss_pred ccccCchhHHHHHHHHHHhCCce--ee--cCCCC-ccccccccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCc
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQ--HV--DASGT-KVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGL 387 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~--~~--~~~~~-~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl 387 (663)
+.++.|++..++.|.-.+..... +. ...+. ......++||+||||||||++|+++|+.....++....+....+.
T Consensus 13 ~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~~~ 92 (253)
T d1sxja2 13 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKT 92 (253)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCHH
T ss_pred HHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchhhH
Confidence 35889999888887766532100 00 00011 112235899999999999999999999988877765443221110
Q ss_pred eE-EEeecC---chhH---hhhh--hhhhccCCeeecccccccChhhHHhHHHHHHh
Q 006051 388 TV-TAVKDG---GEWM---LEAG--ALVLADGGLCCIDEFDSMREHDRATIHEAMEQ 435 (663)
Q Consensus 388 ~~-~~~~~~---~~~~---~~~g--~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~ 435 (663)
.. ...... ..+. .... ........++++||++.+....+..+...++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~ 149 (253)
T d1sxja2 93 LLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF 149 (253)
T ss_dssp HHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhhhhHHHhhh
Confidence 00 000000 0000 0000 00112345899999999998888777776654
No 26
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.92 E-value=3.2e-10 Score=113.98 Aligned_cols=130 Identities=12% Similarity=0.178 Sum_probs=64.3
Q ss_pred cccccccCCCchHHHHHHHHHHhcC--CceEEeCCCcccCCceEEEeecCchhHhhhhhhh-h-ccCCeeecccccccCh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN--RSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALV-L-ADGGLCCIDEFDSMRE 423 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~--~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l~-~-a~~gvl~iDEid~l~~ 423 (663)
-++||+||||||||.+|+++|..++ .+++....+..... .. |+.......+. . ..++|+||||||.+..
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~-----~~--G~~e~~~~~~f~~a~~~~ilf~DEid~~~~ 196 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSG-----YN--TDFNVFVDDIARAMLQHRVIVIDSLKNVIG 196 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTT-----CB--CCHHHHHHHHHHHHHHCSEEEEECCTTTC-
T ss_pred ceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhc-----cc--chHHHHHHHHHHHHhhccEEEeehhhhhcc
Confidence 3566689999999999999999864 34444322211111 11 22221211221 1 2468999999999865
Q ss_pred hhHHhHHHHHHhceeee---eccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhh--hhhhhhhhhcCCC
Q 006051 424 HDRATIHEAMEQQTISV---AKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLL--SRFDIVLVLLDTK 495 (663)
Q Consensus 424 ~~~~~L~~~me~~~i~i---~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl--~RFdli~~l~d~~ 495 (663)
.........+.++.++- .-+|. ..+..+.|||||||. .+|+ .+.++++ .|||..+.+..+.
T Consensus 197 ~r~~~~~~~~~~r~v~~lL~e~dg~--~~~~~v~viaatN~~-~~~~--------~i~~~~~r~~Rf~~~v~v~~pd 262 (321)
T d1w44a_ 197 AAGGNTTSGGISRGAFDLLSDIGAM--AASRGCVVIASLNPT-SNDD--------KIVELVKEASRSNSTSLVISTD 262 (321)
T ss_dssp ----------CCHHHHHHHHHHHHH--HHHHTCEEEEECCCC-CCCH--------HHHHHHHHHHHHSCSEEEEECS
T ss_pred ccccCCCCCcchhhhhhhhhhcccc--ccCCCeEEEEeCCCc-cccc--------chhhhhhccCcccceeecCCCC
Confidence 43222221111111100 00000 113457899999974 1111 1222333 4999998874443
No 27
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.91 E-value=3.5e-09 Score=111.85 Aligned_cols=71 Identities=25% Similarity=0.392 Sum_probs=51.9
Q ss_pred HhhccccccCchhHHHHHHHHHHhCCceeec---CCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 308 ILRGICPQVFGLFTVKLAVALTLIGGVQHVD---ASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 308 l~~si~p~i~G~~~~K~aill~l~~g~~~~~---~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
|.+.+---|+||+.+|+++..++..-.++.. .....+ .+.||||+||||||||.|||.+|+.+..||+...
T Consensus 8 i~~~Ld~yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei-~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~d 81 (443)
T d1g41a_ 8 IVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEV-TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 81 (443)
T ss_dssp HHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTC-CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhcCcccCcHHHHHHHHHHHHHHHHHhhccccccccc-ccccEEEECCCCCCHHHHHHHHHHHhCCCEEEee
Confidence 3344445689999999999999965322211 111112 2469999999999999999999999988887764
No 28
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.85 E-value=5.5e-10 Score=103.77 Aligned_cols=138 Identities=22% Similarity=0.299 Sum_probs=89.9
Q ss_pred cccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHh----------cCCceEEeCCCcc
Q 006051 314 PQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKL----------SNRSVITTGLGST 383 (663)
Q Consensus 314 p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~----------~~~~~~~~~~~~~ 383 (663)
+.++|.+.-...++..|... ...|++|+||||+|||.+++.+|+. ..+.++....++.
T Consensus 22 d~~igRd~Ei~~l~~iL~r~------------~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~L 89 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQRR------------TKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 89 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTSS------------SSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHH
T ss_pred CCCcCcHHHHHHHHHHHhcc------------CCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHH
Confidence 45778887777777666542 2368999999999999999999973 2345555444333
Q ss_pred cCCceEEEeecCchhHhhhhhhh--h-cc--CCeeecccccccCh--------hhHHhHHHHHHhceeeeeccCceeecC
Q 006051 384 SAGLTVTAVKDGGEWMLEAGALV--L-AD--GGLCCIDEFDSMRE--------HDRATIHEAMEQQTISVAKAGLVTTLS 450 (663)
Q Consensus 384 ~~gl~~~~~~~~~~~~~~~g~l~--~-a~--~gvl~iDEid~l~~--------~~~~~L~~~me~~~i~i~k~g~~~~~~ 450 (663)
.+|.. ..|+|...--.+. + +. +.|+||||+..+-. +.-+.|..+|+.|.+
T Consensus 90 iAg~~-----~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l------------ 152 (195)
T d1jbka_ 90 VAGAK-----YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGEL------------ 152 (195)
T ss_dssp HTTTC-----SHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHTTSC------------
T ss_pred hccCC-----ccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhCCCc------------
Confidence 22221 1255544332221 1 23 34999999999722 234678888888776
Q ss_pred CcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhh
Q 006051 451 TRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLV 490 (663)
Q Consensus 451 ~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~ 490 (663)
.+||||.|. .++..+.-.++|.+||..+.+
T Consensus 153 ---~~IgatT~e-------ey~~~~e~d~aL~rrF~~I~V 182 (195)
T d1jbka_ 153 ---HCVGATTLD-------EYRQYIEKDAALERRFQKVFV 182 (195)
T ss_dssp ---CEEEEECHH-------HHHHHTTTCHHHHTTEEEEEC
T ss_pred ---eEEecCCHH-------HHHHHHHcCHHHHhcCCEeec
Confidence 789999985 222334556799999987654
No 29
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.83 E-value=3.3e-09 Score=100.79 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=79.6
Q ss_pred chhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCc----eEEeCCC--------cccC
Q 006051 318 GLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRS----VITTGLG--------STSA 385 (663)
Q Consensus 318 G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~----~~~~~~~--------~~~~ 385 (663)
+++.+.+.+.-.+..+ +.++.+||+||||+|||++|+.+++..-.. .-.++.. ....
T Consensus 6 w~~~~~~~l~~~~~~~-----------~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 74 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAG-----------RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHP 74 (207)
T ss_dssp GGHHHHHHHHHHHHTT-----------CCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCT
T ss_pred ccHHHHHHHHHHHHcC-----------CcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhcccc
Confidence 4555555555555443 223459999999999999999999853210 0000000 0000
Q ss_pred CceEEEe-ecCchh---Hhh--hhhh----hhccCCeeecccccccChhhHHhHHHHHHhceeeeeccCceeecCCcEEE
Q 006051 386 GLTVTAV-KDGGEW---MLE--AGAL----VLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTII 455 (663)
Q Consensus 386 gl~~~~~-~~~~~~---~~~--~g~l----~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~i 455 (663)
.+..... ...+.. ..+ ...+ ..+...|++|||+|.|..+.+++|+..||+- +.++.+
T Consensus 75 ~~~~~~~~~~~~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep-------------~~~~~f 141 (207)
T d1a5ta2 75 DYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEP-------------PAETWF 141 (207)
T ss_dssp TEEEECCCTTCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSC-------------CTTEEE
T ss_pred ccchhhhhhcccccccchhhHHhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhh-------------ccccee
Confidence 1110000 000000 000 0111 1233459999999999999999999999973 456678
Q ss_pred EEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhh
Q 006051 456 FGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVL 491 (663)
Q Consensus 456 iaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l 491 (663)
|.+||.. ..+.++++||+ ..+.+
T Consensus 142 Il~t~~~------------~~ll~tI~SRc-~~i~~ 164 (207)
T d1a5ta2 142 FLATREP------------ERLLATLRSRC-RLHYL 164 (207)
T ss_dssp EEEESCG------------GGSCHHHHTTS-EEEEC
T ss_pred eeeecCh------------hhhhhhhccee-EEEec
Confidence 8888764 25778999999 44444
No 30
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.39 E-value=5.7e-07 Score=85.24 Aligned_cols=162 Identities=19% Similarity=0.245 Sum_probs=86.4
Q ss_pred ccccccCCCchHHHHHHHHHHhcCC---ceEEeCCCcccCCceEEEeecCchhHhhhhhh-----hhccCCeeecccccc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNR---SVITTGLGSTSAGLTVTAVKDGGEWMLEAGAL-----VLADGGLCCIDEFDS 420 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~---~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l-----~~a~~gvl~iDEid~ 420 (663)
+++|+||||||||+|++++++.+.. .++.... ..........+..+.. ......++|||+++.
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~dll~iDDi~~ 108 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSA---------DDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQF 108 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEH---------HHHHHHHHHHHHHTCHHHHHHHHHTCSEEEEECGGG
T ss_pred cEEEECCCCCcHHHHHHHHHHHhccCccceEEech---------HHHHHHHHHHHHccchhhHHHHHhhccchhhhhhhh
Confidence 4899999999999999999976432 1111000 0000000000001111 123567999999999
Q ss_pred cC--hhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeC-CCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCCh
Q 006051 421 MR--EHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATN-PKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNP 497 (663)
Q Consensus 421 l~--~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN-~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~ 497 (663)
+. +..+..|...++.-. ..+..+|.|++ ++..+ ..+.+.|.||+.--..+.-.++.
T Consensus 109 i~~~~~~~~~lf~lin~~~------------~~~~~iiits~~~p~~l---------~~~~~dL~SRL~~g~~~~i~p~d 167 (213)
T d1l8qa2 109 LSGKERTQIEFFHIFNTLY------------LLEKQIILASDRHPQKL---------DGVSDRLVSRFEGGILVEIELDN 167 (213)
T ss_dssp GTTCHHHHHHHHHHHHHHH------------HTTCEEEEEESSCGGGC---------TTSCHHHHHHHHTSEEEECCCCH
T ss_pred hcCchHHHHHHHHHHHHHh------------hccceEEEecCCcchhc---------cccchHHHHHhhCceEEEECCCc
Confidence 85 445666777666422 11224445554 43222 12456899998754433212332
Q ss_pred hHHHHHHHHHhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHH
Q 006051 498 EWDAVVSSHILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRML 577 (663)
Q Consensus 498 ~~d~~i~~~il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~L 577 (663)
+....+ |+++ ++ .-...+++++.++|... . -++|.|
T Consensus 168 ~~~~~i---------------------------L~~~---a~-~rgl~l~~~v~~yl~~~------------~-~~~R~L 203 (213)
T d1l8qa2 168 KTRFKI---------------------------IKEK---LK-EFNLELRKEVIDYLLEN------------T-KNVREI 203 (213)
T ss_dssp HHHHHH---------------------------HHHH---HH-HTTCCCCHHHHHHHHHH------------C-SSHHHH
T ss_pred HHHHHH---------------------------HHHH---HH-HcCCCCCHHHHHHHHHh------------c-CcHHHH
Confidence 221111 2222 21 12456899988888754 1 158999
Q ss_pred HHHHHHH
Q 006051 578 ESLIRLA 584 (663)
Q Consensus 578 e~lirla 584 (663)
+++++.-
T Consensus 204 ~~~l~~l 210 (213)
T d1l8qa2 204 EGKIKLI 210 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988753
No 31
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.33 E-value=2.3e-07 Score=86.93 Aligned_cols=112 Identities=11% Similarity=0.105 Sum_probs=69.6
Q ss_pred ccccccccCCCchHHHHHHHHHHhcCC------ceEEeCCCcccCCceEEEeecCchhHhhhhhhhhccCCeeecccccc
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSNR------SVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDS 420 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~~------~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l~~a~~gvl~iDEid~ 420 (663)
..++||+||||+|||++|+.+++.... .++.....+.. .....+++-..+..... ..+..-|++|||++.
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~--I~Id~IR~i~~~~~~~~--~~~~~KviIId~ad~ 90 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGEN--IGIDDIRTIKDFLNYSP--ELYTRKYVIVHDCER 90 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSC--BCHHHHHHHHHHHTSCC--SSSSSEEEEETTGGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCC--CCHHHHHHHHHHHhhCc--ccCCCEEEEEeCccc
Confidence 379999999999999999999985321 13332211100 00000010000000000 112334999999999
Q ss_pred cChhhHHhHHHHHHhceeeeeccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhh
Q 006051 421 MREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDI 487 (663)
Q Consensus 421 l~~~~~~~L~~~me~~~i~i~k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdl 487 (663)
|..+.+++|+..||+- |.++.+|.+||.. ..+.++++||+-.
T Consensus 91 l~~~aqNaLLK~LEEP-------------p~~t~fiLit~~~------------~~ll~TI~SRC~~ 132 (198)
T d2gnoa2 91 MTQQAANAFLKALEEP-------------PEYAVIVLNTRRW------------HYLLPTIKSRVFR 132 (198)
T ss_dssp BCHHHHHHTHHHHHSC-------------CTTEEEEEEESCG------------GGSCHHHHTTSEE
T ss_pred cchhhhhHHHHHHhCC-------------CCCceeeeccCCh------------hhCHHHHhcceEE
Confidence 9999999999999962 3455677777654 2577899999943
No 32
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=98.10 E-value=2.9e-06 Score=86.72 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=29.0
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
..+||+||||||||++++++++.++.+++...
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in 186 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELCGGKALNVN 186 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEECCS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcCCCEEEEE
Confidence 57999999999999999999999999887753
No 33
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=97.50 E-value=3.4e-05 Score=75.03 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=28.9
Q ss_pred cccccccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
.+..|||+||||||||++|+++|..+..+++...
T Consensus 31 ~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~ 64 (273)
T d1gvnb_ 31 SPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVID 64 (273)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEEC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEe
Confidence 3467999999999999999999998877766543
No 34
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.38 E-value=0.00012 Score=66.09 Aligned_cols=25 Identities=24% Similarity=0.624 Sum_probs=22.5
Q ss_pred ccccccCCCchHHHHHHHHHHhcCC
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
+|+|+||||+|||+|++.++...+.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCC
Confidence 6899999999999999999987654
No 35
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.36 E-value=9.8e-05 Score=67.47 Aligned_cols=97 Identities=23% Similarity=0.230 Sum_probs=58.5
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEeecCchhHhhhhhhhhccCCeeecccccccChhhHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRA 427 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l~~a~~gvl~iDEid~l~~~~~~ 427 (663)
.-++|+|||+||||.++.++.+.+...++.... ....+.+. .+++..++++||+........+
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~vis~~N-------------~~s~F~Lq----~l~~~kv~l~dD~t~~~~~~~d 116 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGAVISFVN-------------STSHFWLE----PLTDTKVAMLDDATTTCWTYFD 116 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCEECCCCC-------------SSSCGGGG----GGTTCSSEEEEEECHHHHHHHH
T ss_pred eEEEEECCCCccHHHHHHHHHHHhCCEEEeccC-------------CCCCcccc----cccCCeEEEEeccccchHHHHH
Confidence 468999999999999999999987543322111 11112211 2456789999998776655444
Q ss_pred h-HHHHHHhceeeeeccC-ceeecCCcEEEEEeeCCC
Q 006051 428 T-IHEAMEQQTISVAKAG-LVTTLSTRTIIFGATNPK 462 (663)
Q Consensus 428 ~-L~~~me~~~i~i~k~g-~~~~~~~~~~iiaatN~~ 462 (663)
. +..+++-..+++...+ ........ .+|.|+|..
T Consensus 117 ~~lK~ll~G~~vsvd~KhK~~vqi~~p-PliITsN~~ 152 (205)
T d1tuea_ 117 TYMRNALDGNPISIDRKHKPLIQLKCP-PILLTTNIH 152 (205)
T ss_dssp HHCHHHHHTCCEEEC----CCEEECCC-CEEEEESSC
T ss_pred HHHHhccCCCeeeeecccCCcccccCC-CEEEEcCCC
Confidence 4 4556666667665332 12222222 467788865
No 36
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.12 E-value=0.0022 Score=61.79 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=84.2
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEeCCCcccCCceEEEeecCchhHhhhhhhhhccCCeeecccccccChhhHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRA 427 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~g~l~~a~~gvl~iDEid~l~~~~~~ 427 (663)
.-++|+|||+||||.++.++.++.+......... ..+ ..-.+.+.-++++||...- ....+
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~lg~~~~~~~~~--------------~~f----~l~~l~~k~~~~~~e~~~~-~~~~~ 165 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTVPFYGCVNWTN--------------ENF----PFNDCVDKMVIWWEEGKMT-AKVVE 165 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSCEEECCTTC--------------SSC----TTGGGSSCSEEEECSCCEE-TTTHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHhcchhhccccC--------------CCc----cccccCCCEEEEEeCCCcc-ccHHH
Confidence 4578899999999999999999986532111110 111 1112445678999998654 34455
Q ss_pred hHHHHHHhceeeee-ccCceeecCCcEEEEEeeCCCCCCCCCCccccccCCChhhhhhhhhhhhhcCCCChhHHHHHHHH
Q 006051 428 TIHEAMEQQTISVA-KAGLVTTLSTRTIIFGATNPKGHYDPNLSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSH 506 (663)
Q Consensus 428 ~L~~~me~~~i~i~-k~g~~~~~~~~~~iiaatN~~g~~d~~~~~~~~~~l~~aLl~RFdli~~l~d~~~~~~d~~i~~~ 506 (663)
.+..++.-..|++. |......+.....+|.++|..-..... -.....-..+|.+|+-. +.+....+
T Consensus 166 ~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~--~~~~~~~~~~l~~R~~~-~~F~~~~p---------- 232 (267)
T d1u0ja_ 166 SAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDG--NSTTFEHQQPLQDRMFK-FELTRRLD---------- 232 (267)
T ss_dssp HHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEET--TEEECTTHHHHHTTEEE-EECCSCCC----------
T ss_pred HHHHhcCCCceEeecccCCCcEeeCCeEEEEeCCCcccccCC--CccccccchHhhhhEEE-EECCCcCC----------
Confidence 67777766667665 334445566666777777753110000 00001123578888743 32311111
Q ss_pred HhhhcCCCCCCCCCCCCCCCCHHHHHHHHHHHHccC
Q 006051 507 ILAEGGLSEEKDTEPLTDIWPLAMLRRYIYFVKGYF 542 (663)
Q Consensus 507 il~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~r~~~ 542 (663)
.....++.+.++.|+.+++...
T Consensus 233 --------------~~~~~i~~~e~k~f~~W~~~~~ 254 (267)
T d1u0ja_ 233 --------------HDFGKVTKQEVKDFFRWAKDHV 254 (267)
T ss_dssp --------------TTSCCCCHHHHHHHHHHHHHTC
T ss_pred --------------CccCCCCHHHHHHHHHHHHhcC
Confidence 1123477889999999998653
No 37
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.04 E-value=0.00013 Score=64.47 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=27.0
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.+|.|+||||+|||++++.+|+.++.+++.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 379999999999999999999998887764
No 38
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.91 E-value=0.00015 Score=64.86 Aligned_cols=30 Identities=37% Similarity=0.495 Sum_probs=26.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.+|+|+|+||+|||++++.+++..+.+++.
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 579999999999999999999988777665
No 39
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.88 E-value=0.0002 Score=64.59 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=26.3
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
..|+++|+||||||+|++.+++.++.+++.
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~~~~~i~ 37 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAW 37 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 579999999999999999999988766543
No 40
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.76 E-value=0.00027 Score=62.99 Aligned_cols=28 Identities=29% Similarity=0.326 Sum_probs=25.0
Q ss_pred cccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
|+|+|+||+|||++|+.+++..+..++.
T Consensus 5 I~i~G~~GsGKTTva~~L~~~~~~~~~~ 32 (176)
T d2bdta1 5 YIITGPAGVGKSTTCKRLAAQLDNSAYI 32 (176)
T ss_dssp EEEECSTTSSHHHHHHHHHHHSSSEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCCEEE
Confidence 8899999999999999999988776654
No 41
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.64 E-value=0.00047 Score=61.55 Aligned_cols=27 Identities=30% Similarity=0.540 Sum_probs=24.3
Q ss_pred ccccccccCCCchHHHHHHHHHHhcCC
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
+.+|+|+|+||+|||++++.+++.++.
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 378999999999999999999998754
No 42
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=96.63 E-value=0.00031 Score=62.60 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=27.3
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
||.|+|+||+|||++++.+|+.++.+++..
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 589999999999999999999998888764
No 43
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.0003 Score=63.28 Aligned_cols=24 Identities=33% Similarity=0.715 Sum_probs=21.7
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.||+|+||||||||+|++.+++.+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 489999999999999999999754
No 44
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.53 E-value=0.00053 Score=61.21 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=26.3
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
-|+|.|+||+|||++|+.+++.++.+++..
T Consensus 5 iI~l~G~~GsGKsTva~~L~~~l~~~~~~~ 34 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAF 34 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSSSCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCeEEe
Confidence 488899999999999999999998776653
No 45
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.47 E-value=0.00057 Score=60.94 Aligned_cols=31 Identities=35% Similarity=0.457 Sum_probs=27.4
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
.+|.|+|+||+|||++++.+|+.++.+++..
T Consensus 2 p~IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 3588889999999999999999999888753
No 46
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.43 E-value=0.00062 Score=60.98 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=26.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.+|.|+|+||+|||++++.+|+.++.+++.
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id 32 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVD 32 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEe
Confidence 358899999999999999999999888775
No 47
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.42 E-value=0.00056 Score=61.09 Aligned_cols=31 Identities=35% Similarity=0.508 Sum_probs=26.7
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
.-|+|.|+||+|||++++.+++.++.+++..
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~ 35 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHF 35 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEe
Confidence 3488999999999999999999888777654
No 48
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.34 E-value=0.00062 Score=61.47 Aligned_cols=29 Identities=28% Similarity=0.369 Sum_probs=25.4
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+|+|+||||+|||++++.+++..+...+.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceec
Confidence 58999999999999999999987766554
No 49
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.19 E-value=0.0006 Score=62.19 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=25.7
Q ss_pred ccccccccCCCchHHHHHHHHHHhcCCceE
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSNRSVI 376 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~~~~~ 376 (663)
+.+|+|.||||+|||++++.+++-.+-..+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 467999999999999999999998765544
No 50
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.19 E-value=0.0011 Score=58.83 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=24.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.-++|+|+||+|||++++.+++.++...+.
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~ 36 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLD 36 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeec
Confidence 346679999999999999999987765554
No 51
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.18 E-value=0.00085 Score=61.15 Aligned_cols=30 Identities=27% Similarity=0.285 Sum_probs=25.4
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+.|+|+||||+|||++++.+|+..+-..+.
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~ 33 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLA 33 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence 578899999999999999999987655544
No 52
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.13 E-value=0.0012 Score=60.33 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=26.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
..|+|+||||+|||++++.+++..+...+.+
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~is~ 37 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHLSS 37 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEEEH
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHCCeEEcH
Confidence 6799999999999999999999877655543
No 53
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.11 E-value=0.00096 Score=59.58 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=23.1
Q ss_pred cccccccCCCchHHHHHHHHHHhcCC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
.-|+|+|+||+|||++|+.+++.++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 67999999999999999999987643
No 54
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.10 E-value=0.00096 Score=60.27 Aligned_cols=29 Identities=31% Similarity=0.402 Sum_probs=24.9
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+|+|.||||+|||++++.+++..+-..+.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~ 30 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIS 30 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 68999999999999999999987655544
No 55
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.07 E-value=0.001 Score=60.24 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=25.2
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+|+|+||||+|||++++.+++..+-..+.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceee
Confidence 58899999999999999999987665554
No 56
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.98 E-value=0.0016 Score=56.51 Aligned_cols=23 Identities=30% Similarity=0.512 Sum_probs=19.8
Q ss_pred cccccCCCchHHHHHHHHHHhcC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
|+|+|+||+|||++|+.+.+..+
T Consensus 5 Iii~G~pGsGKTTla~~L~~~~~ 27 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAKNP 27 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHHST
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 78899999999999998876544
No 57
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.88 E-value=0.0015 Score=59.83 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.3
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
-|+|+||||+|||++|+.+++..+-..+.+
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEeh
Confidence 478899999999999999999886655553
No 58
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.84 E-value=0.0015 Score=59.58 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=25.0
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.-|+++||||+|||++++.+++..+-..+.
T Consensus 7 ~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 458999999999999999999977654443
No 59
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.83 E-value=0.0014 Score=58.98 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=25.2
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+|+|+||||+|||++++.+++..+...+.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 58899999999999999999987766554
No 60
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.81 E-value=0.0015 Score=58.88 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=25.7
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
..|+|+||||+|||++++.+++..+...+.
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~ 32 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLA 32 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCceEe
Confidence 568999999999999999999987665554
No 61
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.80 E-value=0.0015 Score=59.55 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=25.0
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
.-|+|.||||+|||+.|+.+++..+-..+.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i~ 31 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLS 31 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceEc
Confidence 458999999999999999999977654443
No 62
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.77 E-value=0.0015 Score=59.78 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=25.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
.-|+|+||||+|||++++.+++..+-..+.+
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~is~ 39 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHLST 39 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeEec
Confidence 4588999999999999999999876655543
No 63
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=95.76 E-value=0.004 Score=62.69 Aligned_cols=42 Identities=26% Similarity=0.315 Sum_probs=30.8
Q ss_pred hccccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHH
Q 006051 310 RGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKF 366 (663)
Q Consensus 310 ~si~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ 366 (663)
..++|..-+.+.-|.|+..++.+ .-.++.|+||||||+++..
T Consensus 141 ~~~~~~~~~~~~Q~~A~~~al~~---------------~~~vI~G~pGTGKTt~i~~ 182 (359)
T d1w36d1 141 DKLFPVSDEINWQKVAAAVALTR---------------RISVISGGPGTGKTTTVAK 182 (359)
T ss_dssp HTTCCCTTSCCHHHHHHHHHHTB---------------SEEEEECCTTSTHHHHHHH
T ss_pred HHhccCcccccHHHHHHHHHHcC---------------CeEEEEcCCCCCceehHHH
Confidence 33445544556788899988855 3478899999999987644
No 64
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.69 E-value=0.0014 Score=59.60 Aligned_cols=26 Identities=19% Similarity=0.184 Sum_probs=22.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcCC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
.-|+|+|+||+|||++|+.+++.+..
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~ 45 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVC 45 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 46889999999999999999986543
No 65
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.30 E-value=0.0028 Score=58.75 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=25.5
Q ss_pred cccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
|.+.||||+||+++++.+++-.+-..+.+|
T Consensus 6 I~I~GppGSGKgT~ak~La~~~gl~~iStG 35 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKAMAEALQWHLLDSG 35 (225)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEECHH
Confidence 566799999999999999998887776644
No 66
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.26 E-value=0.0034 Score=56.21 Aligned_cols=26 Identities=31% Similarity=0.456 Sum_probs=21.1
Q ss_pred ccccccccCCCchHHHHHHHHHHhcC
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+.=|+++|+||+|||++++.++...+
T Consensus 14 p~liil~G~pGsGKST~a~~l~~~~~ 39 (172)
T d1yj5a2 14 PEVVVAVGFPGAGKSTFIQEHLVSAG 39 (172)
T ss_dssp CCEEEEECCTTSSHHHHHHHHTGGGT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 45688899999999999998865433
No 67
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.08 E-value=0.024 Score=47.93 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=20.7
Q ss_pred hccCCeeecccccccChhhHHhHHHHHH
Q 006051 407 LADGGLCCIDEFDSMREHDRATIHEAME 434 (663)
Q Consensus 407 ~a~~gvl~iDEid~l~~~~~~~L~~~me 434 (663)
+.+-+++++||++.++.+....+..+++
T Consensus 92 ~~~~~~vIiDE~H~~~~~~~~~~~~~l~ 119 (136)
T d1a1va1 92 GGAYDIIICDECHSTDATSILGIGTVLD 119 (136)
T ss_dssp GCCCSEEEEETTTCCSHHHHHHHHHHHH
T ss_pred hhcCCEEEEecccccCHHHHHHHHHHHH
Confidence 3456899999999998876555655554
No 68
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.06 E-value=0.004 Score=57.85 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=26.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
+.|-+.||||+|||++|+.+++-.+-+.+.+|
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg~~~istG 35 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFGFTYLDTG 35 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHCCEEEEHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCcEECHH
Confidence 44667799999999999999999888777654
No 69
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.88 E-value=0.0044 Score=56.82 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.5
Q ss_pred ccccccCCCchHHHHHHHHHHhc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
=|+|+|.||+|||++|+.+++..
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l 26 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYL 26 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999999754
No 70
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.50 E-value=0.013 Score=55.68 Aligned_cols=28 Identities=29% Similarity=0.292 Sum_probs=23.5
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCce
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSV 375 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~ 375 (663)
.+++++||+|+|||+|++.+++..+...
T Consensus 30 ~~i~i~G~~G~GKTsLl~~~~~~~~~~~ 57 (283)
T d2fnaa2 30 PITLVLGLRRTGKSSIIKIGINELNLPY 57 (283)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHTCCE
T ss_pred CEEEEEcCCCCcHHHHHHHHHHHCCCCe
Confidence 5799999999999999999887665443
No 71
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=94.36 E-value=0.0071 Score=53.12 Aligned_cols=23 Identities=30% Similarity=0.278 Sum_probs=20.3
Q ss_pred ccccccCCCchHHHHHHHHHHhc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.+.++|+||+|||+|++.+++.+
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l 26 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPAL 26 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 47899999999999999998753
No 72
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.27 E-value=0.01 Score=53.58 Aligned_cols=28 Identities=32% Similarity=0.369 Sum_probs=24.2
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCce
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSV 375 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~ 375 (663)
.+|.|+||+|+|||+|++.+++..|..+
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 3589999999999999999998877544
No 73
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.25 E-value=0.0074 Score=53.78 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=20.6
Q ss_pred ccccccCCCchHHHHHHHHHHhc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
-|++.|+||+|||++++.+++.+
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l 25 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNL 25 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999864
No 74
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=94.03 E-value=0.013 Score=56.47 Aligned_cols=49 Identities=20% Similarity=0.017 Sum_probs=35.5
Q ss_pred ccccCchhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHh
Q 006051 313 CPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 313 ~p~i~G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
-|.+||.+.-..-|.-.|..+... ....|.|+|..|+|||+||+.+.+.
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~~~---------~~~~v~I~GmgGiGKTtLA~~v~~~ 67 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMCDL---------DSFFLFLHGRAGSGKSVIASQALSK 67 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTTS---------SSEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCceeCcHHHHHHHHHHHHhccCC---------CceEEEEECCCCCCHHHHHHHHHHh
Confidence 567899997776676666532110 1246889999999999999998764
No 75
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.84 E-value=0.014 Score=52.83 Aligned_cols=27 Identities=30% Similarity=0.383 Sum_probs=23.3
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCce
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSV 375 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~ 375 (663)
+|.|+||+|+|||+|++.+++..+..+
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCce
Confidence 588999999999999999998766543
No 76
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=93.79 E-value=0.025 Score=55.69 Aligned_cols=87 Identities=13% Similarity=0.182 Sum_probs=49.5
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCc--eEEe-CCCccc--CCceEEEeecCchhHhh--hhhhhhccCCeeecccccc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRS--VITT-GLGSTS--AGLTVTAVKDGGEWMLE--AGALVLADGGLCCIDEFDS 420 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~--~~~~-~~~~~~--~gl~~~~~~~~~~~~~~--~g~l~~a~~gvl~iDEid~ 420 (663)
.|||++|++|+|||++++++....|.. +++. ...... ..-....+...++.... -......++..++++|+-.
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR~ 246 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRS 246 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCCS
T ss_pred CCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCccCc
Confidence 689999999999999999999887642 2222 111111 01111112221221111 1112345778999999963
Q ss_pred cChhhHHhHHHHHHhce
Q 006051 421 MREHDRATIHEAMEQQT 437 (663)
Q Consensus 421 l~~~~~~~L~~~me~~~ 437 (663)
++.. .+++++..|.
T Consensus 247 --~ea~-~~l~a~~tGh 260 (323)
T d1g6oa_ 247 --SEAY-DFYNVLCSGH 260 (323)
T ss_dssp --THHH-HHHHHHHTTC
T ss_pred --hhHH-HHHHHHHhcC
Confidence 3443 4678888764
No 77
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=93.66 E-value=0.013 Score=50.99 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=21.1
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.++|+|+|+||+|||+|++++..-
T Consensus 5 e~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 5 EMRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHhCC
Confidence 478999999999999999988753
No 78
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.61 E-value=0.012 Score=50.77 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=19.1
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|+++|+||+|||+|++.+..
T Consensus 2 kivlvG~~~vGKSsLi~~l~~ 22 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKL 22 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 589999999999999999875
No 79
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=93.11 E-value=0.12 Score=42.93 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=16.3
Q ss_pred ccccccccccCCCchHHHHH
Q 006051 345 RGESHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~la 364 (663)
+...+++|.+|||+|||..+
T Consensus 5 ~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp STTCEEEECCCTTSSTTTTH
T ss_pred HcCCcEEEEcCCCCChhHHH
Confidence 44578999999999999554
No 80
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=93.03 E-value=0.016 Score=50.72 Aligned_cols=22 Identities=32% Similarity=0.403 Sum_probs=19.9
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+|+++|+||+|||+|++.+..
T Consensus 3 ~ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 3 LRLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHcC
Confidence 6799999999999999998754
No 81
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=92.97 E-value=0.015 Score=51.81 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=20.5
Q ss_pred cccccCCCchHHHHHHHHHHhcC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+++.|+||+|||++++.+++.++
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~ 26 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999998754
No 82
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.78 E-value=0.022 Score=50.95 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=22.2
Q ss_pred ccccccCCCchHHHHHHHHHHhcCC
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
-|.|+||+|+|||++++.+.+..|.
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~~~ 28 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERIPN 28 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCC
Confidence 4789999999999999999988764
No 83
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.61 E-value=0.02 Score=51.39 Aligned_cols=26 Identities=15% Similarity=0.103 Sum_probs=22.2
Q ss_pred ccccccccCCCchHHHHHHHHHHhcC
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+.-|-+.|++|+|||++|+.+++.++
T Consensus 22 ~~iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 35577999999999999999998654
No 84
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.36 E-value=0.024 Score=48.86 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=19.1
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|+|+|+||+|||+|+..+..
T Consensus 2 KI~liG~~nvGKSSLln~l~~ 22 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKN 22 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 389999999999999999876
No 85
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=92.16 E-value=0.026 Score=51.86 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=21.2
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.-|+|+|.||+|||++|+.+++.+
T Consensus 25 ~vIwltGlsGsGKTTia~~L~~~l 48 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLAVELEHQL 48 (208)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHH
Confidence 569999999999999999998643
No 86
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.08 E-value=0.033 Score=51.77 Aligned_cols=25 Identities=36% Similarity=0.250 Sum_probs=20.6
Q ss_pred ccccccccccCCCchHHHHHHHHHH
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
....-++|+||||+|||+++-.++.
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~ 56 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAV 56 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTT
T ss_pred cCCeEEEEEcCCCCCHHHHHHHHHH
Confidence 3446799999999999999877664
No 87
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.79 E-value=0.024 Score=50.17 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=20.0
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
...|+|+|+||+|||+|+.++..
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 36799999999999999988754
No 88
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.73 E-value=0.029 Score=49.39 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=20.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+|+++|+||+|||+|+..+..
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 6899999999999999998875
No 89
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.72 E-value=0.031 Score=48.83 Aligned_cols=22 Identities=27% Similarity=0.496 Sum_probs=19.3
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|+||+|||+|+..+..
T Consensus 3 iKv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 3 IKMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 5699999999999999987664
No 90
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.69 E-value=0.032 Score=49.02 Aligned_cols=23 Identities=30% Similarity=0.427 Sum_probs=20.1
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
++.|+++|++|+|||+|++.+..
T Consensus 2 eiKi~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 2 EVKLAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHHHHHh
Confidence 36799999999999999988775
No 91
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.40 E-value=0.05 Score=49.18 Aligned_cols=28 Identities=25% Similarity=0.211 Sum_probs=22.2
Q ss_pred cccccccccccCCCchHHHHHHHHHHhc
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
++...-++++||||+|||+++-.++...
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3344679999999999999988877543
No 92
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.32 E-value=0.037 Score=48.85 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 4 ~KivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 4 FKYIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHhc
Confidence 3589999999999999998764
No 93
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.28 E-value=0.048 Score=48.55 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=23.3
Q ss_pred ccccccCCCchHHHHHHHHHHhcCCce
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNRSV 375 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~~~ 375 (663)
.|.|+||+|+||++|++.+.+..|..+
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred cEEEECCCCCCHHHHHHHHHHhCCcCe
Confidence 588999999999999999998766544
No 94
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.18 E-value=0.053 Score=50.42 Aligned_cols=24 Identities=29% Similarity=0.421 Sum_probs=20.5
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..-++++||||+|||+++..++.-
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~ 49 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVEN 49 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHH
Confidence 357899999999999998887764
No 95
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=90.91 E-value=0.04 Score=48.02 Aligned_cols=22 Identities=36% Similarity=0.481 Sum_probs=19.9
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+|+|++|+|||+|+..+..
T Consensus 3 ~ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 3 MELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHc
Confidence 6799999999999999998865
No 96
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.66 E-value=0.044 Score=48.12 Aligned_cols=22 Identities=32% Similarity=0.419 Sum_probs=19.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+|+|+||+|||+|++.+..
T Consensus 6 ~Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 6 YRLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 5699999999999999988765
No 97
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.65 E-value=0.046 Score=47.77 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|+..+..
T Consensus 4 ~Ki~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 4 YKVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5699999999999999988775
No 98
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.59 E-value=0.047 Score=47.67 Aligned_cols=22 Identities=32% Similarity=0.533 Sum_probs=19.3
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 5 FKYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999988765
No 99
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.53 E-value=0.047 Score=47.72 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=18.8
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|+|+|++|+|||+|++.+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998765
No 100
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.39 E-value=0.046 Score=47.79 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=19.9
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 5 ~Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 5 LKVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 6799999999999999998875
No 101
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.31 E-value=0.05 Score=49.42 Aligned_cols=22 Identities=23% Similarity=0.208 Sum_probs=19.9
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+|+|+|+||+|||+|+..+..-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999998763
No 102
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.29 E-value=0.045 Score=48.18 Aligned_cols=23 Identities=39% Similarity=0.550 Sum_probs=20.1
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
...|+++|+||+|||+|++.+..
T Consensus 16 ~~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 16 EVRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp CEEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEEECCCCCCHHHHHHHHhc
Confidence 47899999999999999987743
No 103
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.22 E-value=0.058 Score=50.31 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=20.1
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..-++++||||+|||+++-.++..
T Consensus 36 G~~~li~G~pGsGKT~~~lq~~~~ 59 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQLAHTLAVM 59 (254)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHH
Confidence 356999999999999998877654
No 104
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.19 E-value=0.048 Score=48.05 Aligned_cols=22 Identities=32% Similarity=0.445 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 6799999999999999988764
No 105
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.15 E-value=0.072 Score=48.55 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=22.5
Q ss_pred cccccccCCCchHHHHHHHHHHhcCC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
.-++|+||+|+|||+|.+.+.+..|.
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p~ 28 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQPL 28 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSCT
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCCc
Confidence 34789999999999999999988764
No 106
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.15 E-value=0.047 Score=47.71 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=19.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|+..+..
T Consensus 4 ~Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 4 YKLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4699999999999999988765
No 107
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.12 E-value=0.055 Score=47.43 Aligned_cols=22 Identities=32% Similarity=0.558 Sum_probs=19.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 6 ~Ki~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 6 FKILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHc
Confidence 3499999999999999998865
No 108
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.09 E-value=0.053 Score=47.65 Aligned_cols=22 Identities=23% Similarity=0.582 Sum_probs=19.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|+||+|||+|++.+..
T Consensus 3 ~Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 3 LKVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHc
Confidence 4689999999999999998764
No 109
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=90.06 E-value=0.036 Score=48.84 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=20.0
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+|+++|+||+|||+|++.+..
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 7899999999999999998764
No 110
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.03 E-value=0.049 Score=47.74 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=19.1
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 3 ~Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 3 YRVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEEECCTTSSHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 4689999999999999987764
No 111
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.96 E-value=0.056 Score=47.19 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 4 ~KivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 4 YKLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHc
Confidence 4699999999999999998775
No 112
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.96 E-value=0.09 Score=48.88 Aligned_cols=27 Identities=19% Similarity=0.140 Sum_probs=22.0
Q ss_pred cccccccccccCCCchHHHHHHHHHHh
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+....-+++.|+||+|||+++..++..
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~ 60 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVT 60 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHH
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 334467999999999999999888764
No 113
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.82 E-value=0.059 Score=47.50 Aligned_cols=22 Identities=36% Similarity=0.658 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 5 ~Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 5 FKVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4699999999999999998765
No 114
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.75 E-value=0.061 Score=47.12 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 7 FKLVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 5689999999999999998875
No 115
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.72 E-value=0.061 Score=46.75 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 3 ~Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 3 FKIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4689999999999999998875
No 116
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=89.71 E-value=0.052 Score=46.88 Aligned_cols=23 Identities=30% Similarity=0.511 Sum_probs=20.3
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|+++|+||+|||+|++++...
T Consensus 2 ~kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 2 MKVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57999999999999999988753
No 117
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.70 E-value=0.057 Score=47.36 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=19.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 6 ~Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 6 FKIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999998875
No 118
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.65 E-value=0.07 Score=48.63 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=22.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRS 374 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~ 374 (663)
.=|-+.|++|+|||++++.+++.++..
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhchh
Confidence 346688999999999999999887654
No 119
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.65 E-value=0.058 Score=48.04 Aligned_cols=22 Identities=41% Similarity=0.631 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 6 ~Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 6 IKLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEEECCCCcCHHHHHHHHhc
Confidence 4699999999999999988764
No 120
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.60 E-value=0.062 Score=47.45 Aligned_cols=22 Identities=32% Similarity=0.594 Sum_probs=20.0
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|++|+|||+|++.+..
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5799999999999999998775
No 121
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.58 E-value=0.063 Score=46.99 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=19.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|++|+|||+|+..+..
T Consensus 4 iKi~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 4 IKLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 6799999999999999987664
No 122
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.53 E-value=0.063 Score=47.73 Aligned_cols=22 Identities=23% Similarity=0.594 Sum_probs=19.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|+..+..
T Consensus 3 ~Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 3 LKVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999988775
No 123
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.51 E-value=0.066 Score=48.37 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=20.6
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|+|+|+||+|||+|+.++...
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 46899999999999999999864
No 124
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.44 E-value=0.062 Score=46.68 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=18.8
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|+++|++|+|||+|++.+..
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 388999999999999998875
No 125
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.27 E-value=0.06 Score=46.97 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=19.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5699999999999999998765
No 126
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.26 E-value=0.07 Score=49.01 Aligned_cols=24 Identities=29% Similarity=0.271 Sum_probs=18.8
Q ss_pred ccccccccccCCCchHHHHHHHHH
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia 368 (663)
....-++++|+||+|||+++..++
T Consensus 24 ~~G~~~~I~G~~G~GKT~la~~~~ 47 (242)
T d1tf7a1 24 PIGRSTLVSGTSGTGKTLFSIQFL 47 (242)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHH
Confidence 334678999999999999986543
No 127
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.23 E-value=0.064 Score=46.72 Aligned_cols=22 Identities=41% Similarity=0.623 Sum_probs=19.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|+||+|||+|++.+..
T Consensus 3 ~Ki~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 3 MKILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4589999999999999998775
No 128
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=89.18 E-value=0.065 Score=51.61 Aligned_cols=23 Identities=26% Similarity=0.432 Sum_probs=17.2
Q ss_pred cccccccCCCchHHHH-HHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQF-LKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l-ar~ia~~ 370 (663)
.++|+.|+||||||++ +..++.+
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~l 38 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHL 38 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHHHH
Confidence 4689999999999975 4444443
No 129
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.17 E-value=0.068 Score=49.81 Aligned_cols=23 Identities=39% Similarity=0.683 Sum_probs=20.0
Q ss_pred cccccCCCchHHHHHHHHHHhcC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+-|+||.|+|||+|++.++.+.+
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~~ 49 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIVK 49 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSC
T ss_pred EEEECCCCChHHHHHHHHHcCCC
Confidence 44789999999999999998754
No 130
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=89.13 E-value=0.07 Score=49.37 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=22.3
Q ss_pred cccccccccccCCCchHHHHHHHHHHhc
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
++...-++|.|+||+|||+++-.++..+
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3344679999999999999988887543
No 131
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=89.11 E-value=0.061 Score=50.36 Aligned_cols=29 Identities=24% Similarity=0.444 Sum_probs=24.1
Q ss_pred cccccccccccCCCchHHHHHHHHHHhcC
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+...-.+.++|++|+|||+|++.+..+.+
T Consensus 26 i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 26 IKQGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 34446799999999999999999987654
No 132
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=89.05 E-value=0.062 Score=48.78 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=22.5
Q ss_pred cccccccccCCCchHHHHHHHHHHhcC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..--+.|+||.|+|||+|++.++.+.+
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcccc
Confidence 335678999999999999999987654
No 133
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=88.92 E-value=0.076 Score=46.44 Aligned_cols=22 Identities=27% Similarity=0.395 Sum_probs=19.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4589999999999999998764
No 134
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=88.91 E-value=0.071 Score=49.35 Aligned_cols=25 Identities=28% Similarity=0.582 Sum_probs=21.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
--+.|+||+|+|||++++.++.+..
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHhcCcC
Confidence 4588999999999999999998754
No 135
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=88.87 E-value=0.05 Score=48.25 Aligned_cols=22 Identities=32% Similarity=0.489 Sum_probs=19.6
Q ss_pred ccccccccCCCchHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia 368 (663)
...|+++|+||+|||+|++.+.
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHTC
T ss_pred eEEEEEECCCCCCHHHHHHHHh
Confidence 4789999999999999998764
No 136
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.87 E-value=0.08 Score=49.10 Aligned_cols=27 Identities=33% Similarity=0.586 Sum_probs=22.8
Q ss_pred cccccccccCCCchHHHHHHHHHHhcC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..--+-|+||+|+|||+|++.++.+..
T Consensus 25 ~Gei~~liGpsGsGKSTLl~~i~Gl~~ 51 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLLRMIAGLET 51 (232)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCC
Confidence 335688999999999999999988754
No 137
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.83 E-value=0.076 Score=47.13 Aligned_cols=22 Identities=27% Similarity=0.350 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|++|+|||+|++.+..
T Consensus 6 iKivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 6799999999999999987765
No 138
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=88.79 E-value=0.075 Score=46.28 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=18.5
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
+-++|.+|+|||+|+..+...+
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L 25 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAA 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 3489999999999999887643
No 139
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.70 E-value=0.071 Score=49.42 Aligned_cols=26 Identities=27% Similarity=0.486 Sum_probs=21.9
Q ss_pred cccccccccCCCchHHHHHHHHHHhc
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
..--+-|+||+|+|||+|++.++.+.
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCcchhhHhccCCC
Confidence 33578899999999999999988754
No 140
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.70 E-value=0.072 Score=46.58 Aligned_cols=22 Identities=36% Similarity=0.726 Sum_probs=19.0
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.|+++|++|+|||+|++.+...
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCcCHHHHHHHHhCC
Confidence 4889999999999999987653
No 141
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.62 E-value=0.076 Score=46.62 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 6 ~KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 6 FKFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3599999999999999998764
No 142
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.58 E-value=0.078 Score=46.58 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+|+|++|+|||+|++.+..
T Consensus 4 ~Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 4 YRVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999988764
No 143
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=88.53 E-value=0.079 Score=46.35 Aligned_cols=20 Identities=40% Similarity=0.698 Sum_probs=18.2
Q ss_pred cccccCCCchHHHHHHHHHH
Q 006051 350 LLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~ 369 (663)
|.++|+||+|||+|++++..
T Consensus 3 V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999998864
No 144
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.47 E-value=0.078 Score=46.70 Aligned_cols=22 Identities=36% Similarity=0.596 Sum_probs=19.0
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|+..+..
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~ 24 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSK 24 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999988765
No 145
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=88.36 E-value=0.68 Score=46.36 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=42.7
Q ss_pred ccccccCCCchHHHHHHHHHHhcC---CceEEeCCCc--ccCCceEEEeecC--chhHhhhhhhhhccCCeeeccccccc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSN---RSVITTGLGS--TSAGLTVTAVKDG--GEWMLEAGALVLADGGLCCIDEFDSM 421 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~---~~~~~~~~~~--~~~gl~~~~~~~~--~~~~~~~g~l~~a~~gvl~iDEid~l 421 (663)
-||+.||+|+|||+.+.++.+..+ +.+++..... ...+.....+... ..|..--..+...++-|++|+|+-..
T Consensus 160 liLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~ 239 (401)
T d1p9ra_ 160 IILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDL 239 (401)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSH
T ss_pred eEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcCCh
Confidence 399999999999999998887554 3344432111 1112222111111 22322233345679999999999764
No 146
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.36 E-value=0.085 Score=46.15 Aligned_cols=22 Identities=36% Similarity=0.466 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 5689999999999999998765
No 147
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=88.35 E-value=0.072 Score=50.24 Aligned_cols=28 Identities=25% Similarity=0.478 Sum_probs=23.2
Q ss_pred ccccccccccCCCchHHHHHHHHHHhcC
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+..-.+-|+||+|+|||+|++.+..+..
T Consensus 39 ~~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 39 PAGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp CTTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred cCCCEEEEECCCCChHHHHHHHHhcccC
Confidence 3346799999999999999999987643
No 148
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.26 E-value=0.089 Score=46.19 Aligned_cols=22 Identities=32% Similarity=0.563 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|+..+..
T Consensus 7 ~KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 7 FKVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 4699999999999999977765
No 149
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.24 E-value=0.072 Score=47.06 Aligned_cols=21 Identities=19% Similarity=0.387 Sum_probs=18.8
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|+|+|+||+|||+|+.++..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 388999999999999999864
No 150
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=88.16 E-value=0.074 Score=47.69 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=19.9
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|.|+|+||+|||+|++++.+
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHhcC
Confidence 3699999999999999999974
No 151
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.94 E-value=0.096 Score=45.74 Aligned_cols=22 Identities=36% Similarity=0.545 Sum_probs=19.1
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 7 fKi~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 7 FKVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3489999999999999997765
No 152
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=87.90 E-value=0.093 Score=48.92 Aligned_cols=27 Identities=30% Similarity=0.571 Sum_probs=22.6
Q ss_pred cccccccccCCCchHHHHHHHHHHhcC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..--+-|+||+|+|||+|++.++.+..
T Consensus 28 ~Ge~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCC
Confidence 335688999999999999999987643
No 153
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=87.88 E-value=0.1 Score=46.13 Aligned_cols=23 Identities=30% Similarity=0.377 Sum_probs=20.4
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|||.|++|+|||+++-.+.+.
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 67999999999999999887764
No 154
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=87.80 E-value=0.096 Score=48.44 Aligned_cols=22 Identities=23% Similarity=0.452 Sum_probs=19.3
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
|++.|++|+|||+|++.+.+..
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 6889999999999999998643
No 155
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.75 E-value=0.09 Score=46.76 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=19.8
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|++|+|||+|++.+..
T Consensus 10 ~Ki~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 10 LKCVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHhh
Confidence 6799999999999999988765
No 156
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=87.60 E-value=0.086 Score=49.17 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=23.4
Q ss_pred ccccccccccCCCchHHHHHHHHHHhcC
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+..--+-|+||+|+|||+|++.++.+.+
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHcCcC
Confidence 3345789999999999999999998654
No 157
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.55 E-value=0.088 Score=49.55 Aligned_cols=28 Identities=32% Similarity=0.396 Sum_probs=23.1
Q ss_pred ccccccccccCCCchHHHHHHHHHHhcC
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
...-.+-++||+|+|||+|++.+..+..
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcccC
Confidence 3346789999999999999999987643
No 158
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.50 E-value=0.11 Score=45.94 Aligned_cols=24 Identities=29% Similarity=0.335 Sum_probs=20.9
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.+.|+++|++|+|||+|+..+..-
T Consensus 5 ~~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 5 ELRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEEECCTTTTHHHHHHHHHHS
T ss_pred cEEEEEECCCCCCHHHHHHHHHhC
Confidence 478999999999999999877653
No 159
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=87.44 E-value=0.14 Score=46.75 Aligned_cols=24 Identities=29% Similarity=0.279 Sum_probs=17.6
Q ss_pred ccccccccccCCCchHHHHHHHHH
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia 368 (663)
..+.-++|+||+|+|||+.+--+|
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLA 32 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLA 32 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
Confidence 344668999999999998543333
No 160
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=87.41 E-value=0.09 Score=49.20 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=23.3
Q ss_pred ccccccccccCCCchHHHHHHHHHHhcC
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
.+.--+.++||+|+|||+|++.+..+..
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 53 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFYQ 53 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHhhC
Confidence 3446789999999999999999987653
No 161
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=87.35 E-value=0.1 Score=48.50 Aligned_cols=25 Identities=36% Similarity=0.628 Sum_probs=21.7
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
--+-|+||+|+|||+|++.++.+..
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHHcCCC
Confidence 4588999999999999999987653
No 162
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=87.24 E-value=0.084 Score=49.22 Aligned_cols=25 Identities=24% Similarity=0.445 Sum_probs=21.5
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
--+-|+||+|+|||+|++.++.+.+
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHcCCcc
Confidence 4578999999999999999987643
No 163
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=87.17 E-value=0.13 Score=45.49 Aligned_cols=23 Identities=26% Similarity=0.482 Sum_probs=20.5
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
...|.++|.||+|||+|+.++..
T Consensus 8 ~~kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 8 AIKVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
Confidence 36799999999999999998864
No 164
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.96 E-value=0.1 Score=49.89 Aligned_cols=29 Identities=21% Similarity=0.374 Sum_probs=24.3
Q ss_pred cccccccccccCCCchHHHHHHHHHHhcC
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+...-.+.|+||+|+|||+|++.++.+..
T Consensus 59 i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 59 IEKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp ECTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred EcCCCEEEEECCCCChHHHHHHHHhCCCc
Confidence 44446789999999999999999998654
No 165
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.94 E-value=0.11 Score=45.93 Aligned_cols=22 Identities=36% Similarity=0.634 Sum_probs=19.1
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+|+|++|+|||+|++.+..
T Consensus 3 ~KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4589999999999999987765
No 166
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.92 E-value=0.11 Score=46.45 Aligned_cols=22 Identities=27% Similarity=0.350 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+++|++|+|||+|++.+..
T Consensus 4 iKvvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 4 IKCVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5699999999999999877664
No 167
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=86.85 E-value=0.11 Score=47.37 Aligned_cols=23 Identities=35% Similarity=0.306 Sum_probs=13.1
Q ss_pred cccccccccCCCchHHHHHHHHH
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia 368 (663)
.+.-++|+||+|+|||+.+--+|
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA 33 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLA 33 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 34568889999999998643333
No 168
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.84 E-value=0.07 Score=46.88 Aligned_cols=22 Identities=41% Similarity=0.572 Sum_probs=9.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|+||+|||+|++.+..
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 7 FKLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEEECCCCC-----------
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999986654
No 169
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=86.83 E-value=0.063 Score=47.34 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=20.1
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..+|.|+|.|++|||+|++++..
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 37899999999999999988743
No 170
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=86.66 E-value=0.13 Score=46.89 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=16.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.-++|+||+|+|||+.+--+|.
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~ 28 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGR 28 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 4578899999999996443443
No 171
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=86.56 E-value=0.11 Score=45.83 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=20.1
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..+||.|++|+|||+++-.+.+.
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 67999999999999999877653
No 172
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.49 E-value=0.11 Score=46.33 Aligned_cols=21 Identities=43% Similarity=0.634 Sum_probs=19.0
Q ss_pred cccccccCCCchHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia 368 (663)
+.|+|+|++|+|||+|+..+.
T Consensus 3 iKivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 3 VKILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEEECSTTSSHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHh
Confidence 579999999999999999883
No 173
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=86.44 E-value=0.11 Score=50.31 Aligned_cols=22 Identities=36% Similarity=0.578 Sum_probs=16.7
Q ss_pred ccccccCCCchHHHHH-HHHHHh
Q 006051 349 HLLLVGDPGTGKSQFL-KFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~la-r~ia~~ 370 (663)
++|+.|+||||||+.+ ..++++
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~l 48 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYL 48 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHHHHH
Confidence 6999999999999754 444443
No 174
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.19 E-value=0.081 Score=46.37 Aligned_cols=22 Identities=50% Similarity=0.727 Sum_probs=18.0
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|+..+..
T Consensus 4 ~Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 4 FKLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999886643
No 175
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=86.17 E-value=0.14 Score=46.56 Aligned_cols=20 Identities=35% Similarity=0.376 Sum_probs=15.3
Q ss_pred cccccCCCchHHHHHHHHHH
Q 006051 350 LLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~ 369 (663)
++|+||+|+|||+.+--+|.
T Consensus 13 i~lvGp~GvGKTTTiaKLA~ 32 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLAL 32 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67899999999986544443
No 176
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.16 E-value=0.13 Score=46.11 Aligned_cols=22 Identities=41% Similarity=0.581 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|+++|++|+|||+|++.+..
T Consensus 7 ~KivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 7 FKLLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHhh
Confidence 3589999999999999998765
No 177
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=86.11 E-value=0.11 Score=48.95 Aligned_cols=23 Identities=26% Similarity=0.395 Sum_probs=21.0
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..+|+|+|.||+|||++..++..
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg 54 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIG 54 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCcHHHHHHHHhC
Confidence 47899999999999999999875
No 178
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=86.06 E-value=0.13 Score=45.30 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=19.2
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|.|+|.||+|||+|++++..
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~ 27 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLG 27 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 599999999999999999875
No 179
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=86.01 E-value=0.11 Score=45.81 Aligned_cols=21 Identities=38% Similarity=0.567 Sum_probs=18.7
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
+|.|+|.||+|||+|++++.+
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 588999999999999998853
No 180
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=85.98 E-value=0.14 Score=44.87 Aligned_cols=23 Identities=35% Similarity=0.395 Sum_probs=20.1
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|||.|++|.|||+++-.+.+.
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 68999999999999998776664
No 181
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=85.76 E-value=1.5 Score=31.55 Aligned_cols=64 Identities=19% Similarity=0.101 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+|..-+++.+... ....++.++...+.+... -.+..+.+-|...|+-..|.+|+.+||..|+
T Consensus 4 LP~a~I~ri~k~~---~~~ris~ea~~~l~~~~e---------------~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Al 65 (68)
T d1htaa_ 4 LPIAPIGRIIKNA---GAERVSDDARIALAKVLE---------------EMGEEIASEAVKLAKHAGRKTIKAEDIELAR 65 (68)
T ss_dssp SCHHHHHHHHHHT---TCSCCCHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred CcHHHHHHHHHHC---CcchhhHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHhCCCcCCHHHHHHHH
Confidence 6777788776543 345799999988887632 2366778888888998999999999999998
Q ss_pred HH
Q 006051 606 LC 607 (663)
Q Consensus 606 ~l 607 (663)
+.
T Consensus 66 k~ 67 (68)
T d1htaa_ 66 KM 67 (68)
T ss_dssp HT
T ss_pred Hh
Confidence 74
No 182
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=85.63 E-value=0.16 Score=46.28 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=16.3
Q ss_pred cccccccCCCchHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia 368 (663)
.-++|+||+|+|||+.+--+|
T Consensus 10 ~vi~lvGptGvGKTTTiAKLA 30 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTIGKLA 30 (211)
T ss_dssp EEEEEECCTTSCHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 458899999999998644444
No 183
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=85.60 E-value=0.2 Score=43.25 Aligned_cols=26 Identities=23% Similarity=0.266 Sum_probs=22.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcCC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
.-|+|.|+=|+|||+++|.+++.++.
T Consensus 34 ~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred eEEEEecCCCccHHHHHHHHHhhccc
Confidence 45899999999999999999987653
No 184
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.52 E-value=0.31 Score=42.87 Aligned_cols=22 Identities=36% Similarity=0.471 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.|+|+|+.|+|||+|++.+..
T Consensus 3 ~KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 3 VKLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHhh
Confidence 6799999999999999988754
No 185
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=85.35 E-value=0.13 Score=48.53 Aligned_cols=29 Identities=31% Similarity=0.583 Sum_probs=23.8
Q ss_pred cccccccccccCCCchHHHHHHHHHHhcC
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
++..--+-|+||.|+|||+|++.++.+.+
T Consensus 25 i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~ 53 (258)
T d1b0ua_ 25 ARAGDVISIIGSSGSGKSTFLRCINFLEK 53 (258)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHHcCcc
Confidence 34446788999999999999999987654
No 186
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.31 E-value=0.064 Score=46.21 Aligned_cols=22 Identities=32% Similarity=0.572 Sum_probs=19.6
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.|.|+|.||+|||+|+.++...
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5889999999999999998753
No 187
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=85.27 E-value=0.16 Score=45.25 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=19.2
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.=|-++|++|+|||++|+.+.+.
T Consensus 4 ~IIgitG~~gSGKstva~~l~~~ 26 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALLRSW 26 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
Confidence 44568899999999999999653
No 188
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=85.17 E-value=0.83 Score=40.93 Aligned_cols=25 Identities=20% Similarity=0.134 Sum_probs=19.4
Q ss_pred ccccccCCCchHHHHHHHHHHhcCC
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
+.++.+|+|+|||.++-.++.....
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~ 111 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELST 111 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCS
T ss_pred CcEEEeCCCCCceehHHhHHHHhcC
Confidence 4578899999999987777765443
No 189
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=85.12 E-value=0.14 Score=45.51 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=19.3
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.+|+|+.|+|||+++.++.-.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5778999999999999998654
No 190
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=85.09 E-value=0.15 Score=44.59 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=19.3
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|.|+|.||+|||+|++++.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999975
No 191
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=84.87 E-value=0.17 Score=46.81 Aligned_cols=27 Identities=41% Similarity=0.537 Sum_probs=22.4
Q ss_pred ccccccccccCCCchHHHHHHHHHHhc
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
+..--+-|+||.|+|||+|++.++.+.
T Consensus 23 ~~Gei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 23 RAGEILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp ETTCEEECBCCTTSSHHHHHHHHHTSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 344678899999999999999998753
No 192
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=84.76 E-value=0.14 Score=45.67 Aligned_cols=28 Identities=29% Similarity=0.497 Sum_probs=23.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCce
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSV 375 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~ 375 (663)
.-|.+.|+.|+|||++++.+++.++...
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l~~~~ 37 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYKNDIC 37 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGTTTEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCcE
Confidence 4688999999999999999998775533
No 193
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=84.29 E-value=0.095 Score=49.40 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=21.7
Q ss_pred cccccccccCCCchHHHHHHHHHHhc
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
..--+.++|++|+|||+|++.+..+.
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHhcC
Confidence 33579999999999999999887654
No 194
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=84.23 E-value=0.74 Score=42.36 Aligned_cols=22 Identities=27% Similarity=0.446 Sum_probs=19.7
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..++++||...|||+++|.++-
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l 63 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTAL 63 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHH
Confidence 4588999999999999999885
No 195
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=84.03 E-value=0.18 Score=47.70 Aligned_cols=21 Identities=33% Similarity=0.583 Sum_probs=18.4
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+ +|+|+.|+|||+++.+++-
T Consensus 25 ln-~IvG~NGsGKStiL~Ai~~ 45 (292)
T g1f2t.1 25 IN-LIIGQNGSGKSSLLDAILV 45 (292)
T ss_dssp EE-EEECCTTSSHHHHHHHHHH
T ss_pred eE-EEECCCCCCHHHHHHHHHH
Confidence 44 5999999999999999974
No 196
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=83.89 E-value=0.2 Score=48.46 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.9
Q ss_pred ccccccccccCCCchHHHHHHHHHHhcC
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
+.+.=|.+.|++|+|||++++.++.++.
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~ 105 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHh
Confidence 3456788999999999999999998764
No 197
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=83.63 E-value=2.1 Score=30.51 Aligned_cols=63 Identities=25% Similarity=0.231 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+|..-+++.+... ....++.+|...+..... -.+..|.+-|..+|.-..|++|+.+|+..|+
T Consensus 3 LP~a~I~rI~k~~---~~~ris~ea~~~l~~a~e---------------~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al 64 (66)
T d1ku5a_ 3 LPIAPVDRLIRKA---GAERVSEQAAKVLAEYLE---------------EYAIEIAKKAVEFARHAGRKTVKVEDIKLAI 64 (66)
T ss_dssp SCHHHHHHHHHHT---TCSEECHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHTTTCSEECHHHHHHHH
T ss_pred CCHHHHHHHHHhC---cccccHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 5667777777543 345799999988887632 2467788999999999999999999999987
Q ss_pred H
Q 006051 606 L 606 (663)
Q Consensus 606 ~ 606 (663)
+
T Consensus 65 ~ 65 (66)
T d1ku5a_ 65 K 65 (66)
T ss_dssp T
T ss_pred h
Confidence 4
No 198
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=83.62 E-value=0.23 Score=39.07 Aligned_cols=25 Identities=44% Similarity=1.116 Sum_probs=18.5
Q ss_pred EecCCCCeeeecccccccccccCCCCCCCCCCCCCCCC
Q 006051 150 MCRKCKHMFPVYPELETRNSIVLPSHCPSQRSKPCEGT 187 (663)
Q Consensus 150 ~C~~C~~~~~~~~~~~~~~~~~~p~~Cp~~~~~~C~~~ 187 (663)
+|.+||..|. ..+..|.+||. |++.
T Consensus 69 ~CrkCGfvFr--------~~~kkPSRCP~-----CKSE 93 (105)
T d2gmga1 69 QCRKCGFVFK--------AEINIPSRCPK-----CKSE 93 (105)
T ss_dssp BBTTTCCBCC--------CCSSCCSSCSS-----SCCC
T ss_pred hhhhcCCeec--------ccCCCCCCCCC-----CCCc
Confidence 6999997652 24678999994 7764
No 199
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=83.32 E-value=0.19 Score=47.44 Aligned_cols=22 Identities=32% Similarity=0.221 Sum_probs=18.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.-.+|+|+||+|||+++-.++.
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~ 51 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAA 51 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 3577899999999999887765
No 200
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.12 E-value=0.23 Score=43.99 Aligned_cols=24 Identities=38% Similarity=0.551 Sum_probs=20.9
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
..|+++|+.|+|||+|++.+..--
T Consensus 3 ~Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 3 LKLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHhCCC
Confidence 579999999999999999886653
No 201
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.09 E-value=0.43 Score=43.60 Aligned_cols=21 Identities=33% Similarity=0.471 Sum_probs=18.6
Q ss_pred cccccCCCchHHHHHHHHHHh
Q 006051 350 LLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~ 370 (663)
.++.|..|+|||+|++.+.+.
T Consensus 6 ~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHS
T ss_pred EEEeeCCCCCHHHHHHHHHhc
Confidence 577999999999999998874
No 202
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=83.09 E-value=0.17 Score=44.71 Aligned_cols=21 Identities=38% Similarity=0.553 Sum_probs=18.3
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.|-|+|+||+|||+|+.++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 578999999999999988753
No 203
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=83.05 E-value=0.2 Score=46.58 Aligned_cols=27 Identities=26% Similarity=0.415 Sum_probs=22.2
Q ss_pred cccccccccCCCchHHHHHHHHHHhcC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..--+-|+||.|+|||+|++.++.+..
T Consensus 27 ~Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 334577999999999999999987654
No 204
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=82.99 E-value=0.18 Score=47.33 Aligned_cols=29 Identities=24% Similarity=0.450 Sum_probs=23.3
Q ss_pred cccccccccccCCCchHHHHHHHHHHhcC
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
++..--+-|+||.|+|||+|++.++.+.+
T Consensus 27 v~~Gei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 27 VNKGDVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHHCCCc
Confidence 44445678899999999999999987643
No 205
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=82.50 E-value=0.36 Score=45.46 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=19.8
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..-++|+||||+|||+++-.++..
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~ 77 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAA 77 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHH
Confidence 356899999999999998777654
No 206
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=82.48 E-value=0.21 Score=46.54 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=22.5
Q ss_pred cccccccccCCCchHHHHHHHHHHhcC
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..--+-|+||.|+|||+|++.++.+.+
T Consensus 31 ~Gei~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 335688899999999999999987654
No 207
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=82.43 E-value=1.2 Score=29.03 Aligned_cols=36 Identities=25% Similarity=0.662 Sum_probs=24.0
Q ss_pred EEEEEEEecCCCCeeeecccccccccccCCCCCCCCCCCCCCCCc--eEEec
Q 006051 144 EGERTYMCRKCKHMFPVYPELETRNSIVLPSHCPSQRSKPCEGTN--FQFVE 193 (663)
Q Consensus 144 ~~~~~f~C~~C~~~~~~~~~~~~~~~~~~p~~Cp~~~~~~C~~~~--f~~~~ 193 (663)
.....++|+.||+...- -..|..||. |+.-. |++..
T Consensus 4 ~~~~~W~C~~CGyi~~g---------~~aP~~CPv-----C~~p~~~Fe~~~ 41 (44)
T d1lkoa2 4 EQATKWRCRNCGYVHEG---------TGAPELCPA-----CAHPKAHFELLG 41 (44)
T ss_dssp EEEEEEEETTTCCEEEE---------EECCSBCTT-----TCCBGGGEEECC
T ss_pred CCCeEEEcCCCCcEEEC---------CCCCCcCCC-----CCCcHHHHeecc
Confidence 45568999999987431 245889984 76542 65543
No 208
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=81.72 E-value=0.24 Score=45.27 Aligned_cols=22 Identities=36% Similarity=0.480 Sum_probs=19.5
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
..|||+|++|+|||+|++.+..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 5799999999999999988754
No 209
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=81.66 E-value=0.35 Score=44.30 Aligned_cols=20 Identities=30% Similarity=0.376 Sum_probs=17.6
Q ss_pred ccccccCCCchHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia 368 (663)
-..|+|++|+|||+|+.++.
T Consensus 97 t~~~~G~SGVGKSTLiN~L~ 116 (225)
T d1u0la2 97 ISTMAGLSGVGKSSLLNAIN 116 (225)
T ss_dssp EEEEECSTTSSHHHHHHHHS
T ss_pred eEEEECCCCCCHHHHHHhhc
Confidence 46889999999999998874
No 210
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=81.52 E-value=0.27 Score=44.46 Aligned_cols=27 Identities=37% Similarity=0.459 Sum_probs=21.1
Q ss_pred cccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
|-++|.+|+|||++++++.+. +..++.
T Consensus 6 IgitG~igSGKStv~~~l~~~-G~~vid 32 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFADL-GINVID 32 (208)
T ss_dssp EEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred EEEECCCcCCHHHHHHHHHHC-CCcEEE
Confidence 558999999999999998754 444443
No 211
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=81.04 E-value=0.27 Score=44.38 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=19.9
Q ss_pred ccccccCCCchHHHHHHHHHHhc
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
-|.+.|++|+|||++++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37788999999999999998754
No 212
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.76 E-value=0.31 Score=43.69 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=19.3
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
|.+.|..|+|||++++.+++.+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l 24 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAF 24 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5678999999999999999754
No 213
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=80.68 E-value=0.37 Score=45.40 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=18.6
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
-=+++.|+||+|||+++..++.
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~ 57 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQAL 57 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHH
Confidence 4578999999999998887763
No 214
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.61 E-value=0.42 Score=43.87 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=24.3
Q ss_pred cccccccCCCchHHHHHHHHHHhcCCceE
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSNRSVI 376 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~~~~~ 376 (663)
.=|.+.|.-|+|||++++.+++.++...+
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 44788999999999999999998765444
No 215
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.25 E-value=0.33 Score=46.25 Aligned_cols=24 Identities=21% Similarity=0.185 Sum_probs=19.5
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+.=|-|.|++|+|||+|+..+...
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~ 50 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNH 50 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHHHHH
Confidence 345667899999999999988654
No 216
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=79.98 E-value=0.3 Score=44.02 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=21.2
Q ss_pred cccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
|-++|.+|+|||++++++.+ .+.+++.
T Consensus 5 IgITG~igSGKStv~~~l~~-~G~~vid 31 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFTD-LGVPLVD 31 (205)
T ss_dssp EEEECSTTSCHHHHHHHHHT-TTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHH-CCCeEEE
Confidence 55899999999999999875 3555554
No 217
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=79.56 E-value=0.33 Score=47.27 Aligned_cols=23 Identities=43% Similarity=0.638 Sum_probs=20.4
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|-++|+||+|||+|...+.+.
T Consensus 55 ~~IgitG~pGaGKSTLi~~l~~~ 77 (327)
T d2p67a1 55 LRLGVTGTPGAGKSTFLEAFGML 77 (327)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHH
T ss_pred eEEEeeCCCCCCHHHHHHHHHHH
Confidence 56889999999999999988764
No 218
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=79.42 E-value=1.9 Score=39.20 Aligned_cols=20 Identities=40% Similarity=0.579 Sum_probs=18.6
Q ss_pred cccccCCCchHHHHHHHHHH
Q 006051 350 LLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~ 369 (663)
++|+||...|||+++|.++-
T Consensus 38 ~iiTGpN~~GKSt~lk~i~l 57 (224)
T d1ewqa2 38 VLITGPNMAGKSTFLRQTAL 57 (224)
T ss_dssp EEEESCSSSSHHHHHHHHHH
T ss_pred EEEECCCccccchhhhhhHH
Confidence 78999999999999999885
No 219
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=79.24 E-value=0.41 Score=45.54 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=19.7
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.+++.|++|+|||.|+..+++.
T Consensus 45 r~~I~g~~g~GKT~l~~~i~~~ 66 (289)
T d1xpua3 45 RGLIVAPPKAGKTMLLQNIAQS 66 (289)
T ss_dssp EEEEEECSSSSHHHHHHHHHHH
T ss_pred eeeEeCCCCCCHHHHHHHHHHH
Confidence 5899999999999999888863
No 220
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=79.06 E-value=1.3 Score=41.61 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=19.3
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.+++.|++|+|||.|+..+++-
T Consensus 70 r~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 70 KIGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp EEEEEECTTSSHHHHHHHHHHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHH
Confidence 4899999999999998888754
No 221
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.01 E-value=0.39 Score=43.48 Aligned_cols=22 Identities=23% Similarity=0.196 Sum_probs=19.0
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
|.|.|+.|+|||++++.+++.+
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L 27 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEAL 27 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6667999999999999998853
No 222
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=78.81 E-value=0.37 Score=48.67 Aligned_cols=22 Identities=50% Similarity=0.680 Sum_probs=19.2
Q ss_pred ccccccccCCCchHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia 368 (663)
..|++++|++|+|||.+++.+.
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li 71 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELA 71 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHH
T ss_pred cceEEEEeCCCCcHHHHHHHHH
Confidence 4799999999999999887654
No 223
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=78.67 E-value=1.3 Score=42.87 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=20.2
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.-|-+.|+||+|||+|...+.+.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~ 74 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSL 74 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCHHHHHHHHHHH
Confidence 55889999999999999988864
No 224
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=78.60 E-value=0.36 Score=46.47 Aligned_cols=20 Identities=35% Similarity=0.572 Sum_probs=17.6
Q ss_pred cccccCCCchHHHHHHHHHH
Q 006051 350 LLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~ 369 (663)
.+|+|+.|+|||++++++.-
T Consensus 26 ~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45799999999999999964
No 225
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=77.75 E-value=0.3 Score=47.29 Aligned_cols=21 Identities=29% Similarity=0.325 Sum_probs=18.7
Q ss_pred ccccCCCchHHHHHHHHHHhc
Q 006051 351 LLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 351 LL~G~pGtGKs~lar~ia~~~ 371 (663)
+|+|+.|+|||+++.|++-.+
T Consensus 30 vi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 30 AIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEECTTSSSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHH
Confidence 789999999999999998654
No 226
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=77.27 E-value=5.4 Score=33.06 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=46.2
Q ss_pred ccccccccccCCCchHHH-HHHHHHH--hcCCceEEeC----------CCcccCCceEEEeecCchhHhhhhhhhhccCC
Q 006051 345 RGESHLLLVGDPGTGKSQ-FLKFAAK--LSNRSVITTG----------LGSTSAGLTVTAVKDGGEWMLEAGALVLADGG 411 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~-lar~ia~--~~~~~~~~~~----------~~~~~~gl~~~~~~~~~~~~~~~g~l~~a~~g 411 (663)
+|.+++. +||=.+|||+ |++.+.+ ..++.+.... .-.+..|....+..-.....+ -.....+--
T Consensus 6 ~G~l~lI-~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~~~D~Ry~~~~i~sh~g~~~~a~~~~~~~~~--~~~~~~~~d 82 (141)
T d1xx6a1 6 HGWVEVI-VGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREI--LKYFEEDTE 82 (141)
T ss_dssp CCEEEEE-ECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC-------CEEECTTSCEEECEEESSSTHH--HHHCCTTCS
T ss_pred ceeEEEE-EeccccHHHHHHHHHHHHhhhcCCcEEEEEeccccccccceeeecccceEEEEEecchhhh--hhhhccccc
Confidence 3446655 7999999998 5666644 3444332211 111223333222111110000 011223456
Q ss_pred eeecccccccChhhHHhHHHHHHhce
Q 006051 412 LCCIDEFDSMREHDRATIHEAMEQQT 437 (663)
Q Consensus 412 vl~iDEid~l~~~~~~~L~~~me~~~ 437 (663)
+++|||+.-++......+..+.+.|.
T Consensus 83 vI~IDE~QFf~d~~~~~~~~l~~~g~ 108 (141)
T d1xx6a1 83 VIAIDEVQFFDDEIVEIVNKIAESGR 108 (141)
T ss_dssp EEEECSGGGSCTHHHHHHHHHHHTTC
T ss_pred EEEEeehhhccccHHHHHHhheeCCc
Confidence 99999999998765555666555443
No 227
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.05 E-value=0.26 Score=45.23 Aligned_cols=24 Identities=25% Similarity=0.502 Sum_probs=21.6
Q ss_pred cccccCCCchHHHHHHHHHHhcCC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
|.+.|+.|+|||++++.+++.+..
T Consensus 5 I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 5 ISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEECSTTSSHHHHHTTTGGGCTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhc
Confidence 778999999999999999987754
No 228
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=76.94 E-value=1.1 Score=41.84 Aligned_cols=40 Identities=23% Similarity=0.270 Sum_probs=28.1
Q ss_pred chhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHH
Q 006051 318 GLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 318 G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+|..+-..|.-.+.++ .+.+-||.|+.|+|||.++-.++.
T Consensus 87 ~Q~~ai~ei~~d~~~~------------~~m~rLL~GdvGSGKT~Va~~a~~ 126 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISE------------KPMNRLLQGDVGSGKTVVAQLAIL 126 (264)
T ss_dssp HHHHHHHHHHHHHHSS------------SCCCCEEECCSSSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhcc------------CcceeeeeccccccccHHHHHHHH
Confidence 4555666666666554 125789999999999998766553
No 229
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=76.65 E-value=0.5 Score=43.43 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=19.8
Q ss_pred cccccCCCchHHHHHHHHHHhcC
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
|-|+|..|+|||++|+++++..+
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g 26 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYS 26 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 66899999999999999987543
No 230
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=75.62 E-value=0.29 Score=45.04 Aligned_cols=19 Identities=32% Similarity=0.599 Sum_probs=16.7
Q ss_pred cccccCCCchHHHHHHHHH
Q 006051 350 LLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia 368 (663)
.+|+|++|+|||+|+.++.
T Consensus 100 ~vl~G~SGVGKSSLiN~L~ 118 (231)
T d1t9ha2 100 TVFAGQSGVGKSSLLNAIS 118 (231)
T ss_dssp EEEEESHHHHHHHHHHHHC
T ss_pred EEEECCCCccHHHHHHhhc
Confidence 4688999999999998875
No 231
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.91 E-value=0.45 Score=47.72 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=21.1
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.+|.++|.||+|||+|..++..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 48899999999999999999875
No 232
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.63 E-value=1.8 Score=35.00 Aligned_cols=22 Identities=9% Similarity=-0.013 Sum_probs=20.2
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.-|+|.|-+|+|||++|+++..
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~ 28 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLS 28 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHH
Confidence 6799999999999999999964
No 233
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=73.35 E-value=1.1 Score=42.18 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=18.8
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.-+.++||||+|||+++-.++..
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~~~ 83 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAVAN 83 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHHHH
T ss_pred eeEEEecCCCcHHHHHHHHHHHH
Confidence 56889999999999998666543
No 234
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=72.98 E-value=0.55 Score=41.04 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=21.3
Q ss_pred ccccccccCCCchHHHHHHHHHHh
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
.+||=++|.|++|||+|+.++.+.
T Consensus 5 ~inIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 5 NINLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHTT
T ss_pred CEEEEEEeCCCCcHHHHHHHHHHh
Confidence 378999999999999999999754
No 235
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.78 E-value=0.97 Score=40.77 Aligned_cols=25 Identities=24% Similarity=0.183 Sum_probs=21.8
Q ss_pred ccccccCCCchHHHHHHHHHHhcCC
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSNR 373 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~~ 373 (663)
=|-+.|+.|+|||++++.+++.+..
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHh
Confidence 4778999999999999999987654
No 236
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=72.20 E-value=0.97 Score=42.43 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=20.3
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.-+.++||||+|||+++-.++..+
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~a 81 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQA 81 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHH
T ss_pred eEEEEecCCccchHHHHHHHHHHH
Confidence 568899999999999988877654
No 237
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=71.50 E-value=4.5 Score=30.16 Aligned_cols=65 Identities=18% Similarity=0.075 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHH
Q 006051 525 IWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITA 604 (663)
Q Consensus 525 ~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~A 604 (663)
.++...++++..-+. ...+|+++.+.|..... -.++.+++-|...|+-..|++|+.+||..|
T Consensus 9 gI~k~~i~Riar~~G---v~ris~d~~~~l~~~l~---------------~~l~~i~~~a~~~~~hakRKTvt~~DV~~A 70 (82)
T d2huec1 9 GITKPAIRRLARRGG---VKRISGLIYEETRGVLK---------------VFLENVIRDAVTYTEHAKRKTVTAMDVVYA 70 (82)
T ss_dssp SSCHHHHHHHHHHTT---CCEECTTHHHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCSEECHHHHHHH
T ss_pred CcCHHHHHHHHHHcC---cccchHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHhCCCcCCHHHHHHH
Confidence 477888888765443 45799999888887532 235677788888888888999999999988
Q ss_pred HHH
Q 006051 605 ILC 607 (663)
Q Consensus 605 i~l 607 (663)
++-
T Consensus 71 lkr 73 (82)
T d2huec1 71 LKR 73 (82)
T ss_dssp TTT
T ss_pred HHh
Confidence 753
No 238
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.73 E-value=0.51 Score=44.98 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=18.9
Q ss_pred cccccCCCchHHHHHHHHHHhc
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~ 371 (663)
-+|+||.|+|||.+++|+.-++
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTS
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 3689999999999999997654
No 239
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=70.66 E-value=1.1 Score=39.91 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=15.5
Q ss_pred cccccccCCCchHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLK 365 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar 365 (663)
.++++.+|+|+|||..+-
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 579999999999998753
No 240
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=70.05 E-value=1.5 Score=40.07 Aligned_cols=40 Identities=25% Similarity=0.116 Sum_probs=28.0
Q ss_pred chhHHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHH
Q 006051 318 GLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 318 G~~~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+..+...+.-.+..+ ...+.||.|++|+|||.++-.++.
T Consensus 59 ~Q~~~~~~i~~~~~~~------------~~~~~LL~GdvGsGKT~V~~~a~~ 98 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQP------------LAMDRLVCGDVGFGKTEVAMRAAF 98 (233)
T ss_dssp HHHHHHHHHHHHHHSS------------SCCEEEEECCCCTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcc------------CccCeEEEcCCCCCcHHHHHHHHH
Confidence 3556666666666554 125789999999999998655553
No 241
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=69.93 E-value=0.89 Score=40.14 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=16.6
Q ss_pred cccccccCCCchHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia 368 (663)
.|+|+++|+|+|||.++-.++
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~ 44 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIA 44 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHH
Confidence 468999999999998655444
No 242
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=69.49 E-value=1 Score=41.07 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=22.0
Q ss_pred ccccccccccccCCCchHHHHHHHHHHh
Q 006051 343 KVRGESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 343 ~~r~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
++|.++ |-++|.|+.|||+|+.++...
T Consensus 2 ~~r~p~-IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 2 KIRSPI-VSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp EECCCE-EEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCccHHHHHHHHHhh
Confidence 345545 889999999999999998764
No 243
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=68.67 E-value=0.87 Score=45.26 Aligned_cols=20 Identities=25% Similarity=0.517 Sum_probs=17.6
Q ss_pred ccccCCCchHHHHHHHHHHh
Q 006051 351 LLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 351 LL~G~pGtGKs~lar~ia~~ 370 (663)
+++||.|+|||.++.|++=.
T Consensus 29 ~i~G~NGsGKS~ileAi~~~ 48 (427)
T d1w1wa_ 29 SIIGPNGSGKSNMMDAISFV 48 (427)
T ss_dssp EEECSTTSSHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHH
Confidence 57899999999999999743
No 244
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.72 E-value=3.1 Score=28.20 Aligned_cols=13 Identities=15% Similarity=0.830 Sum_probs=10.8
Q ss_pred EEEEecCCCCeee
Q 006051 147 RTYMCRKCKHMFP 159 (663)
Q Consensus 147 ~~f~C~~C~~~~~ 159 (663)
+.|+|..||.++.
T Consensus 1 aky~C~~CgyiYd 13 (53)
T d1brfa_ 1 AKWVCKICGYIYD 13 (53)
T ss_dssp CEEEETTTCCEEE
T ss_pred CceECCCCCcEEC
Confidence 4799999998764
No 245
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=67.21 E-value=0.52 Score=44.78 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=18.2
Q ss_pred ccccccCCCchHHHHHHHHHHhcC
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
=|-+.|++|+|||++++.+.++++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~ 29 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFR 29 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHh
Confidence 377899999999999999998764
No 246
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=66.69 E-value=10 Score=31.15 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=16.0
Q ss_pred ccccCCCchHHH-HHHHHHHh
Q 006051 351 LLVGDPGTGKSQ-FLKFAAKL 370 (663)
Q Consensus 351 LL~G~pGtGKs~-lar~ia~~ 370 (663)
+++||=.+|||+ |++.+.+.
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~ 26 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRL 26 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHH
T ss_pred EEEccccCHHHHHHHHHHHHH
Confidence 467999999999 77777553
No 247
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=65.95 E-value=8.8 Score=29.07 Aligned_cols=62 Identities=21% Similarity=0.274 Sum_probs=46.8
Q ss_pred HHHHHHHccCCCc--cCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHHH
Q 006051 533 RYIYFVKGYFKPI--LTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIE 609 (663)
Q Consensus 533 ~~i~~~r~~~~p~--ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~~ 609 (663)
-||..+-++++|. ++..|...+..+.. ...|.+..-|--.|+...+.+++..+++.|++|+-
T Consensus 7 ~Yi~kVLKqVhp~~giS~kam~imnsfvn---------------diferIa~EA~~La~~~kr~TitsreIqtAvrL~L 70 (92)
T d1tzyb_ 7 IYVYKVLKQVHPDTGISSKAMGIMNSFVN---------------DIFERIAGEASRLAHYNKRSTITSREIQTAVRLLL 70 (92)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHS
T ss_pred HHHHHHHHhhCCCCCccHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHC
Confidence 3554444566765 78999988887742 24667777777888889999999999999999873
No 248
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.22 E-value=0.89 Score=27.16 Aligned_cols=13 Identities=31% Similarity=0.991 Sum_probs=11.1
Q ss_pred EEEEecCCCCeee
Q 006051 147 RTYMCRKCKHMFP 159 (663)
Q Consensus 147 ~~f~C~~C~~~~~ 159 (663)
+.|.|.+||..|.
T Consensus 3 ~afvcskcgktft 15 (37)
T d1x6ha1 3 AAFVCSKCGKTFT 15 (37)
T ss_dssp CCEECSSSCCEES
T ss_pred ceeeecccccchh
Confidence 4699999999875
No 249
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=64.20 E-value=1.6 Score=39.75 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=15.8
Q ss_pred cccccccCCCchHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKF 366 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ 366 (663)
.++++++|+|+|||..+-.
T Consensus 59 ~~~~i~apTGsGKT~~~~~ 77 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLA 77 (237)
T ss_dssp CCEECCCCBTSCSHHHHHH
T ss_pred CCEEEEecCCChHHHHHHH
Confidence 5799999999999976443
No 250
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=63.96 E-value=2.9 Score=39.01 Aligned_cols=23 Identities=35% Similarity=0.538 Sum_probs=20.9
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+.++++|-|.+|||+|+.++.+
T Consensus 112 ~~~v~vvG~PNvGKSsliN~L~~ 134 (273)
T d1puja_ 112 AIRALIIGIPNVGKSTLINRLAK 134 (273)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHT
T ss_pred ceEEEEEecCccchhhhhhhhhc
Confidence 47899999999999999999875
No 251
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=60.47 E-value=4.5 Score=25.16 Aligned_cols=22 Identities=27% Similarity=0.724 Sum_probs=16.1
Q ss_pred EEEEecCCCCeeeecccccccccccCCCCCCC
Q 006051 147 RTYMCRKCKHMFPVYPELETRNSIVLPSHCPS 178 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~~~~~~~~~~~~p~~Cp~ 178 (663)
..|.|+.||+... + ..|..||-
T Consensus 4 ~~~~C~vCG~i~~--------g--~~P~~CPv 25 (37)
T d1nnqa2 4 KVYICPICGYTAV--------D--EAPEYCPV 25 (37)
T ss_dssp CEEECTTTCCEEE--------S--CCCSBCTT
T ss_pred cEEECCCCCCEec--------C--CCCCcCCC
Confidence 4799999998742 1 25788984
No 252
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=59.94 E-value=4.1 Score=25.15 Aligned_cols=22 Identities=18% Similarity=0.431 Sum_probs=15.8
Q ss_pred EEEEecCCCCeeeecccccccccccCCCCCCC
Q 006051 147 RTYMCRKCKHMFPVYPELETRNSIVLPSHCPS 178 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~~~~~~~~~~~~p~~Cp~ 178 (663)
..|.|+.||+... + ..|..||-
T Consensus 4 ~~~vC~vCGyi~~--------g--~~Pe~CPv 25 (36)
T d1yuza2 4 KFHLCPICGYIHK--------G--EDFEKCPI 25 (36)
T ss_dssp CEEECSSSCCEEE--------S--SCCSBCTT
T ss_pred CEEECCCCCCEee--------C--CCCCcCCC
Confidence 4689999998742 1 25778984
No 253
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.86 E-value=10 Score=30.82 Aligned_cols=23 Identities=22% Similarity=0.470 Sum_probs=15.7
Q ss_pred cccccccccCCCchHHH-HHHHHHH
Q 006051 346 GESHLLLVGDPGTGKSQ-FLKFAAK 369 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~-lar~ia~ 369 (663)
|.+++ ++||=.+|||+ |++.+.+
T Consensus 2 G~L~l-i~GpMfsGKTt~Li~~~~~ 25 (133)
T d1xbta1 2 GQIQV-ILGPMFSGKSTELMRRVRR 25 (133)
T ss_dssp CEEEE-EECCTTSCHHHHHHHHHHH
T ss_pred cEEEE-EEecccCHHHHHHHHHHHH
Confidence 34544 46999999998 5555544
No 254
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=58.68 E-value=1.8 Score=38.66 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=20.6
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+||.++|-++.|||+|+.++..
T Consensus 3 ~ini~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 3 HVNVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEEEeCCCCcHHHHHHHHHH
Confidence 48999999999999999998864
No 255
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.26 E-value=6.8 Score=34.71 Aligned_cols=16 Identities=31% Similarity=0.466 Sum_probs=14.6
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++.+|+|||||..
T Consensus 48 ~dvl~~a~TGsGKT~a 63 (212)
T d1qdea_ 48 HDVLAQAQSGTGKTGT 63 (212)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CCEEeecccccchhhh
Confidence 6899999999999984
No 256
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=56.92 E-value=7.4 Score=26.54 Aligned_cols=13 Identities=23% Similarity=0.948 Sum_probs=10.5
Q ss_pred EEEEecCCCCeee
Q 006051 147 RTYMCRKCKHMFP 159 (663)
Q Consensus 147 ~~f~C~~C~~~~~ 159 (663)
..|+|..||.++.
T Consensus 3 kky~C~~CgyiYd 15 (56)
T d1s24a_ 3 LKWICITCGHIYD 15 (56)
T ss_dssp CEEEETTTTEEEE
T ss_pred ccEECCCCCcEEC
Confidence 3799999998764
No 257
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=56.68 E-value=1.9 Score=41.75 Aligned_cols=25 Identities=28% Similarity=0.280 Sum_probs=22.2
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..|.+-|+-|+|||++++.+++.+.
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEEECCccCCHHHHHHHHHHHhc
Confidence 5688999999999999999998654
No 258
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=56.54 E-value=2.8 Score=36.90 Aligned_cols=21 Identities=33% Similarity=0.384 Sum_probs=17.4
Q ss_pred cccccccCCCchHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia 368 (663)
.++++.-|+|+|||..+....
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~ 61 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPA 61 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhhhh
Confidence 579999999999998865443
No 259
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=54.90 E-value=2.7 Score=37.17 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=14.5
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++..|+|||||..
T Consensus 39 ~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTHA 54 (209)
T ss_dssp CCEEEECCSSHHHHHH
T ss_pred CCeEeeccccccccee
Confidence 5899999999999973
No 260
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=54.86 E-value=2.6 Score=39.84 Aligned_cols=26 Identities=31% Similarity=0.427 Sum_probs=21.9
Q ss_pred ccccccccccCCCchHHHHHHHHHHh
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+.+..+=|+|-|.+|||+|..++...
T Consensus 8 ~~~~kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 8 GNNLKTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp SSCCEEEEEECSSSSHHHHHHHHHHS
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHCC
Confidence 34567889999999999999999853
No 261
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.21 E-value=26 Score=28.30 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=54.1
Q ss_pred CCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHH
Q 006051 525 IWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITA 604 (663)
Q Consensus 525 ~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~A 604 (663)
.+|...+++++.-.-. ...++.+|..+|...... -+..|...|..+|....|.+|+.+||..|
T Consensus 4 ~LP~a~I~kI~K~~~~--~~~is~dA~~~i~~a~~~---------------Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~A 66 (135)
T d1jfib_ 4 TIPRAAINKMIKETLP--NVRVANDARELVVNCCTE---------------FIHLISSEANEICNKSEKKTISPEHVIQA 66 (135)
T ss_dssp CCCHHHHHHHHHHHST--TCCBCHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHTTCSSBCHHHHHHH
T ss_pred cccHHHHHHHHhhCCc--cchhhHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhCCCcccHHHHHHH
Confidence 4678888888866532 346899999888876322 35566788888999999999999999999
Q ss_pred HHHHHhh
Q 006051 605 ILCIESS 611 (663)
Q Consensus 605 i~l~~~s 611 (663)
+.-++..
T Consensus 67 l~~~~f~ 73 (135)
T d1jfib_ 67 LESLGFG 73 (135)
T ss_dssp HHHHTTG
T ss_pred HHHcCcH
Confidence 9886644
No 262
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=53.52 E-value=3.1 Score=39.10 Aligned_cols=21 Identities=29% Similarity=0.350 Sum_probs=18.0
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+++.|++|+|||.++..++.
T Consensus 70 r~~If~~~g~GKt~ll~~~~~ 90 (285)
T d2jdia3 70 RELIIGDRQTGKTSIAIDTII 90 (285)
T ss_dssp BCEEEESTTSSHHHHHHHHHH
T ss_pred EEEeecCCCCChHHHHHHHHH
Confidence 589999999999999876664
No 263
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.16 E-value=6.4 Score=37.84 Aligned_cols=35 Identities=20% Similarity=0.446 Sum_probs=28.2
Q ss_pred hhhhhccCCeeecccccccChhhHHhHHHHHHhce
Q 006051 403 GALVLADGGLCCIDEFDSMREHDRATIHEAMEQQT 437 (663)
Q Consensus 403 g~l~~a~~gvl~iDEid~l~~~~~~~L~~~me~~~ 437 (663)
.++..+|+.++++|=.+-+.......+..+.+.+.
T Consensus 115 ~al~~~D~allVVda~eGv~~qT~~~~~~a~~~~~ 149 (341)
T d1n0ua2 115 AALRVTDGALVVVDTIEGVCVQTETVLRQALGERI 149 (341)
T ss_dssp HHHHTCSEEEEEEETTTBSCHHHHHHHHHHHHTTC
T ss_pred HHHhhcCceEEEEecccCcchhHHHHHHHHHHcCC
Confidence 44566899999999999988888888888877664
No 264
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=53.15 E-value=1.8 Score=45.28 Aligned_cols=22 Identities=32% Similarity=0.524 Sum_probs=16.9
Q ss_pred cccccccCCCchHHHHH-HHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL-KFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la-r~ia~ 369 (663)
-|+|+.|.||||||+.+ ..++.
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~ 47 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAY 47 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeCchHHHHHHHHHHHH
Confidence 47999999999998865 34443
No 265
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.81 E-value=8 Score=34.04 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=14.4
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++..|+|||||..
T Consensus 39 ~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CCEEEECCTTSCHHHH
T ss_pred CCeEEEeccccccccc
Confidence 6899999999999974
No 266
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=52.79 E-value=2.6 Score=36.70 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=22.6
Q ss_pred cccccCCCchHHHHHHHHHHhcCCceEE
Q 006051 350 LLLVGDPGTGKSQFLKFAAKLSNRSVIT 377 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~~~~~~~~ 377 (663)
+|++|...+|||.+|..++...++.+|.
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~~~~Yi 29 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAPQVLYI 29 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCSSEEEE
T ss_pred EEEECCCCccHHHHHHHHHhcCCCcEEE
Confidence 6899999999999999988665554443
No 267
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=51.62 E-value=27 Score=28.78 Aligned_cols=67 Identities=21% Similarity=0.073 Sum_probs=52.9
Q ss_pred CCCCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHH
Q 006051 523 TDIWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAI 602 (663)
Q Consensus 523 ~~~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~ 602 (663)
...+|...+++++..+ -...++.+|..+|..... -.+..+.+.|...|.-..|.+|+.+|+.
T Consensus 77 ~~~fp~a~IkRi~k~~---g~~ris~dA~~~l~~~~E---------------~fi~~l~~~A~~~a~~~kRkTI~~~DI~ 138 (151)
T d1f1ea_ 77 GELFGRATVRRILKRA---GIERASSDAVDLYNKLIC---------------RATEELGEKAAEYADEDGRKTVQGEDVE 138 (151)
T ss_dssp SCCCCHHHHHHHHHHT---TCCEECHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCSEECHHHHH
T ss_pred cCccCHHHHHHHHHcC---CcchhhHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHhCCCcCCHHHHH
Confidence 3468889999998643 244799999988887632 2366778888889999999999999999
Q ss_pred HHHHH
Q 006051 603 TAILC 607 (663)
Q Consensus 603 ~Ai~l 607 (663)
.|+..
T Consensus 139 ~Av~~ 143 (151)
T d1f1ea_ 139 KAITY 143 (151)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99865
No 268
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.71 E-value=30 Score=25.51 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+|...+++.+.-+-. -...++.||..++.+.... -+..|..-|..+|.-..|++|+.+|+..|+
T Consensus 3 LP~a~v~ri~K~~~p-~~~~is~ea~~~i~~a~e~---------------Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al 66 (87)
T d1n1ja_ 3 LPIANVARIMKNAIP-QTGKIAKDAKECVQECVSE---------------FISFITSEASERCHQEKRKTINGEDILFAM 66 (87)
T ss_dssp CCHHHHHHHHHHTSC-TTCEECHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHTTCSSBCHHHHHHHH
T ss_pred CcHhHHHHHHHHhCC-ccccccHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Confidence 466667777633210 1235899999888876322 345567778888999999999999999999
Q ss_pred HHHH
Q 006051 606 LCIE 609 (663)
Q Consensus 606 ~l~~ 609 (663)
.-.+
T Consensus 67 ~~~~ 70 (87)
T d1n1ja_ 67 STLG 70 (87)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 7755
No 269
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=50.10 E-value=3.3 Score=36.64 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=22.5
Q ss_pred cccccccccccCCCchHHHHHHHHHH
Q 006051 344 VRGESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.++.+||.++|-...|||+|+.++..
T Consensus 5 ~~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 5 VQPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCCeEEEEEEccCCcHHHHHHHHHh
Confidence 35568999999999999999999864
No 270
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.06 E-value=3.1 Score=23.74 Aligned_cols=12 Identities=33% Similarity=0.919 Sum_probs=10.3
Q ss_pred EEecCCCCeeee
Q 006051 149 YMCRKCKHMFPV 160 (663)
Q Consensus 149 f~C~~C~~~~~~ 160 (663)
|+|..||..|..
T Consensus 3 y~C~eCgK~F~~ 14 (26)
T d1x6ea2 3 YKCLECGKAFSQ 14 (26)
T ss_dssp EECSSSCCEESS
T ss_pred ccCCCCcCeecc
Confidence 899999998764
No 271
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=47.64 E-value=2.7 Score=40.43 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=19.8
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..|-+-|+-|+|||++++.+++.+.
T Consensus 5 lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 5 LRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEECSCTTSSHHHHHHHHTC---
T ss_pred eEEEEECCcCCCHHHHHHHHHHHhC
Confidence 3478899999999999999987543
No 272
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=47.33 E-value=2.6 Score=40.62 Aligned_cols=25 Identities=20% Similarity=0.119 Sum_probs=21.9
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
..|-+-|+-|+|||++++.+++.+.
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~l~ 30 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHHFA 30 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHTTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4588999999999999999998654
No 273
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=45.87 E-value=32 Score=26.60 Aligned_cols=49 Identities=16% Similarity=0.228 Sum_probs=33.5
Q ss_pred EEEEEecCcc----cceeeCCEEEEEEEEeeecCCCCcCcccccceEEEeeeeeeccc
Q 006051 222 ILVILKDDLV----DIVKAGDDVIVTGILTAKWSPDLKDVRCDLDPVLIANHVRRTNE 275 (663)
Q Consensus 222 i~V~L~~dLv----~~~~pGd~V~v~GIl~~~~~~~~~~~~~~~~~~~~a~~i~~~~~ 275 (663)
+.|++-+.+. +.++.|+.|.|.|-+..+... +. .-.+++.|++|+..+.
T Consensus 54 i~vv~~g~~Ae~~~~~l~kG~~v~v~G~L~~~~~~---~~--~~r~v~~a~~ie~l~s 106 (111)
T d1v1qa_ 54 MPVIVSGHENQAITHSITVGSRITVQGFISCHKAK---NG--LSKMVLHAEQIELIDS 106 (111)
T ss_dssp EEEEEESTGGGGGGTTCCTTCEEEEEEEEEEECTT---TT--SCEEEEEEEEEEETTS
T ss_pred EEEEEeCHHHHHHHHHhcCCCEEEEEEEEEEeccc---CC--CCEEEEEEEEEEEecC
Confidence 5666777765 568999999999998865322 11 1245688888876543
No 274
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=45.78 E-value=4.7 Score=37.53 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=16.2
Q ss_pred cccccccccccCCCchHHH
Q 006051 344 VRGESHLLLVGDPGTGKSQ 362 (663)
Q Consensus 344 ~r~~~~iLL~G~pGtGKs~ 362 (663)
++...++|+.+|+|+|||.
T Consensus 6 ~~~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp SSTTCEEEECCCTTSSTTT
T ss_pred hhcCCcEEEEECCCCCHHH
Confidence 4556789999999999995
No 275
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=45.76 E-value=2.7 Score=40.01 Aligned_cols=15 Identities=33% Similarity=0.578 Sum_probs=13.6
Q ss_pred cccccCCCchHHHHH
Q 006051 350 LLLVGDPGTGKSQFL 364 (663)
Q Consensus 350 iLL~G~pGtGKs~la 364 (663)
-||.|-+|||||+|.
T Consensus 17 alffGLSGTGKTTLs 31 (318)
T d1j3ba1 17 AVFFGLSGTGKTTLS 31 (318)
T ss_dssp EEEEECTTSCHHHHT
T ss_pred EEEEccCCCCccccc
Confidence 589999999999975
No 276
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=45.36 E-value=4.3 Score=37.71 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.3
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
.||-++|..|.|||+|+.++...++
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 4789999999999999999976543
No 277
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.73 E-value=5.1 Score=35.81 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=14.6
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++.+++|+|||..
T Consensus 50 ~dvl~~a~TGsGKTla 65 (218)
T d2g9na1 50 YDVIAQAQSGTGKTAT 65 (218)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CCEEEEcccchhhhhh
Confidence 6899999999999984
No 278
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=44.14 E-value=4.5 Score=35.58 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=21.7
Q ss_pred cccccccccCCCchHHHHHHHHHHh
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+.+||-++|-++.|||+|+.++...
T Consensus 2 p~ini~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 2 PHVNVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCcHHHHHHHHHHH
Confidence 3478999999999999999988754
No 279
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.12 E-value=16 Score=25.57 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+|..-+++++.... -...++.+|.-++...... -+..|...|..+|+.+.|++++.+|+..||
T Consensus 3 fP~srVkkimk~~~--~~~~is~~A~~~~~~a~E~---------------Fi~~l~~~A~~~a~~~krktI~~~dl~~ai 65 (66)
T d1jfia_ 3 FPPARIKKIMQTDE--EIGKVAAAVPVIISRALEL---------------FLESLLKKACQVTQSRNAKTMTTSHLKQCI 65 (66)
T ss_dssp CCHHHHHHHHTTST--TCCCBCTTHHHHHHHHHHH---------------HHHHHHHHHHHHHHTC---CBCHHHHHTTC
T ss_pred CChHHHHHHHhcCC--ccccccHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhCCCcCCHHHHHHHh
Confidence 45666666664332 1346788887777765322 245677888999999999999999998875
No 280
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=44.05 E-value=3.4 Score=39.09 Aligned_cols=15 Identities=33% Similarity=0.578 Sum_probs=13.4
Q ss_pred cccccCCCchHHHHH
Q 006051 350 LLLVGDPGTGKSQFL 364 (663)
Q Consensus 350 iLL~G~pGtGKs~la 364 (663)
-||.|-+|||||+|.
T Consensus 17 alfFGLSGTGKTTLs 31 (313)
T d2olra1 17 AVFFGLSGTGKTTLS 31 (313)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEEccCCCCcccce
Confidence 479999999999986
No 281
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.95 E-value=4.6 Score=35.73 Aligned_cols=16 Identities=38% Similarity=0.453 Sum_probs=14.4
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++..|+|||||..
T Consensus 41 ~dvl~~a~TGsGKTla 56 (206)
T d1veca_ 41 RDILARAKNGTGKSGA 56 (206)
T ss_dssp CCEEEECCSSSTTHHH
T ss_pred CCEEeeccCccccccc
Confidence 6899999999999963
No 282
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.59 E-value=53 Score=23.41 Aligned_cols=63 Identities=16% Similarity=0.125 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
++...|..++...- ..-.+++++.+++.+... .-+++++..|...||.|.+++++..|+....
T Consensus 4 l~K~~L~eLv~~id--p~~~ld~~vee~ll~iAD---------------dFV~~V~~~ac~lAKhR~s~~le~kDvql~L 66 (74)
T d1h3ob_ 4 LTKKKLQDLVREVD--PNEQLDEDVEEMLLQIAD---------------DFIESVVTAACQLARHRKSSTLEVKDVQLHL 66 (74)
T ss_dssp SCHHHHHHHHHHHC--SSCCCCHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCCEECHHHHHHHH
T ss_pred ccHHHHHHHHHHhC--CCCCCCHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 45566666665442 233589999999888753 2467888889999999999999999998654
No 283
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.40 E-value=29 Score=24.92 Aligned_cols=51 Identities=20% Similarity=0.147 Sum_probs=39.8
Q ss_pred CccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHHH
Q 006051 544 PILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIE 609 (663)
Q Consensus 544 p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~~ 609 (663)
..++.+|..++...- ---+..|...|...|+-+.|++++.+|+..|+.-.+
T Consensus 17 ~~is~ea~~~i~~a~---------------E~Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~~~ 67 (78)
T d1n1jb_ 17 KMISAEAPVLFAKAA---------------QIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFD 67 (78)
T ss_dssp CCBCTHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCG
T ss_pred cccchHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhcCC
Confidence 357888887777653 224567788888899999999999999999986544
No 284
>d2q78a1 d.38.1.7 (A:1-130) Uncharacterized protein TM0581 {Thermotoga maritima [TaxId: 2336]}
Probab=42.19 E-value=57 Score=26.02 Aligned_cols=85 Identities=11% Similarity=0.033 Sum_probs=58.3
Q ss_pred eeEEEechhhcccCHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccceEEEEEeeCCCCCCCCCCCcccc
Q 006051 38 YPLYIDFAELLDEDPEIAHLVFSKPADYLRFFEDAAIWAHKIVFDELKSCEKRVEKKFIHVRINVSGSPLECPETFPSIG 117 (663)
Q Consensus 38 ~~l~Vd~~~L~~~dp~La~~l~~~P~~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~vri~~~~~p~~~p~~~~~ir 117 (663)
..+.+|=..++.+|+++.+.=.-.+..++.+++.|+.+++...+++ + ...+-+ ...++
T Consensus 14 ~ev~~~~~~~~~ed~~~~dl~VlaTp~lia~mE~a~~~~l~~~L~~---g-----~ttVG~--------------~v~I~ 71 (130)
T d2q78a1 14 EDVALDETMVWNEDIEMLDLHLVATSALIGVVHRVSYELLSRYLPN---D-----YTAVVV--------------ETLAR 71 (130)
T ss_dssp EEEEECGGGBCCSCGGGGGGCBBCHHHHHHHHHHHHHHHHHTTSCT---T-----EEEEEE--------------EEEEE
T ss_pred EEEecCccccccCCCccccceEEchHHHHHHHHHHHHHHHHhhCCC---C-----ceEEEE--------------EEEEE
Confidence 3467777888999998888445577789999999998887633321 1 111111 12355
Q ss_pred cccccCCCcEEEEeeEEEEecCceeEE
Q 006051 118 RVRVKHHGVLLTLKGTVIRSGATKMYE 144 (663)
Q Consensus 118 ~l~~~~igklv~i~G~V~r~s~vk~~~ 144 (663)
.+.+..+|.=|.+...|+.+..-+...
T Consensus 72 Hla~t~vG~~V~v~a~v~~vdgrrl~F 98 (130)
T d2q78a1 72 HVKAVPTGTRVAVGVRVVGVVGNRVKF 98 (130)
T ss_dssp ECSCCBSSEEEEEEEEEEEEETTEEEE
T ss_pred EcCCcCCCCEEEEEEEEEEEeCCEEEE
Confidence 666788999999999999887766543
No 285
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=42.05 E-value=6.8 Score=28.07 Aligned_cols=15 Identities=27% Similarity=0.786 Sum_probs=11.8
Q ss_pred EEEEEEecCCCCeee
Q 006051 145 GERTYMCRKCKHMFP 159 (663)
Q Consensus 145 ~~~~f~C~~C~~~~~ 159 (663)
..+.|+|..||.++.
T Consensus 4 ~~~ky~C~~CgyiYD 18 (70)
T d1dx8a_ 4 DEGKYECEACGYIYE 18 (70)
T ss_dssp CSSCEEETTTCCEEC
T ss_pred cCCeEEcCCCCeEEC
Confidence 346799999998764
No 286
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=40.89 E-value=5.1 Score=37.34 Aligned_cols=25 Identities=8% Similarity=0.068 Sum_probs=21.6
Q ss_pred cccccccCCCchHHHHHHHHHHhcC
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLSN 372 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~~ 372 (663)
.||-++|..|+|||+|+.++...++
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 4899999999999999999976543
No 287
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=40.83 E-value=16 Score=24.52 Aligned_cols=12 Identities=25% Similarity=0.883 Sum_probs=10.1
Q ss_pred EEEecCCCCeee
Q 006051 148 TYMCRKCKHMFP 159 (663)
Q Consensus 148 ~f~C~~C~~~~~ 159 (663)
.|+|..||.++.
T Consensus 3 ky~C~~CgyiYd 14 (53)
T d1iroa_ 3 KYTCTVCGYIYN 14 (53)
T ss_dssp CEEETTTCCEEC
T ss_pred CeEcCCCCcEEC
Confidence 599999998764
No 288
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=40.70 E-value=4.4 Score=38.42 Aligned_cols=21 Identities=38% Similarity=0.638 Sum_probs=17.8
Q ss_pred cccccCCCchHHHHHHHHHHh
Q 006051 350 LLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 350 iLL~G~pGtGKs~lar~ia~~ 370 (663)
|=|+|-|.+|||+|..++.+.
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 558999999999999999653
No 289
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=40.41 E-value=5.1 Score=34.88 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=21.3
Q ss_pred cccccccccCCCchHHHHHHHHHH
Q 006051 346 GESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 346 ~~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.+||-++|-++.|||+|+.++..
T Consensus 4 ~~inIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 4 AEVNIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHT
T ss_pred CcEEEEEEeccCCcHHHHHHHHHh
Confidence 447899999999999999999964
No 290
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=39.58 E-value=6.8 Score=36.41 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=17.5
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
.++++|++|+|||.|+..+..
T Consensus 69 r~~Ifg~~g~GKt~l~~~~~~ 89 (276)
T d1fx0a3 69 RELIIGDRQTGKTAVATDTIL 89 (276)
T ss_dssp BCBEEESSSSSHHHHHHHHHH
T ss_pred eEeeccCCCCChHHHHHHHHh
Confidence 589999999999999876543
No 291
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=39.27 E-value=4.5 Score=38.44 Aligned_cols=15 Identities=33% Similarity=0.576 Sum_probs=13.6
Q ss_pred cccccCCCchHHHHH
Q 006051 350 LLLVGDPGTGKSQFL 364 (663)
Q Consensus 350 iLL~G~pGtGKs~la 364 (663)
-||.|-+|||||+|.
T Consensus 17 alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 17 TVFFGLSGTGKTTLS 31 (323)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEEccCCCCcccce
Confidence 479999999999997
No 292
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.48 E-value=3.4 Score=22.92 Aligned_cols=10 Identities=30% Similarity=1.069 Sum_probs=8.1
Q ss_pred EEecCCCCee
Q 006051 149 YMCRKCKHMF 158 (663)
Q Consensus 149 f~C~~C~~~~ 158 (663)
|+|.+||..+
T Consensus 2 f~c~kcgkcy 11 (28)
T d2dlqa2 2 FECPKCGKCY 11 (28)
T ss_dssp CBCTTTCCBC
T ss_pred Cccccchhhh
Confidence 7899999764
No 293
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=38.09 E-value=5.6 Score=34.77 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=17.1
Q ss_pred ccccccC-CCchHHHHHHHHHHh
Q 006051 349 HLLLVGD-PGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~-pGtGKs~lar~ia~~ 370 (663)
.+++.|- +|+|||+++-.++..
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~a 25 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQA 25 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHH
T ss_pred eEEEEECCCCccHHHHHHHHHHH
Confidence 4677888 699999987776654
No 294
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.82 E-value=5.6 Score=37.08 Aligned_cols=22 Identities=32% Similarity=0.250 Sum_probs=18.8
Q ss_pred ccccccCCCchHHHHHHHHHHh
Q 006051 349 HLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~~ 370 (663)
-|-++||.+||||.|+..+...
T Consensus 34 vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 34 VVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 5778999999999999987653
No 295
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=37.74 E-value=8.7 Score=33.76 Aligned_cols=19 Identities=16% Similarity=0.361 Sum_probs=15.8
Q ss_pred cccccccCCCchHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKF 366 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ 366 (663)
.++++..|+|+|||..+-.
T Consensus 43 ~d~iv~a~TGsGKT~~~~l 61 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAI 61 (208)
T ss_dssp SEEEEECCSSSSHHHHHHH
T ss_pred CCeeeechhcccccceeec
Confidence 5799999999999986543
No 296
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.67 E-value=7.6 Score=34.07 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=14.2
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.++++.+|+|+|||..
T Consensus 39 ~dvi~~a~tGsGKTla 54 (206)
T d1s2ma1 39 RDILARAKNGTGKTAA 54 (206)
T ss_dssp CCEEEECCTTSCHHHH
T ss_pred CCEEEecCCcchhhhh
Confidence 5799999999999953
No 297
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=37.63 E-value=6.7 Score=36.38 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=19.9
Q ss_pred cccccccCCCchHHHHHHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
..|=|+|-|.+|||+|..++.+.
T Consensus 3 ~~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 3 FKCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHCC
Confidence 35678999999999999999864
No 298
>d1dfxa2 g.41.5.2 (A:1-36) Desulfoferrodoxin N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=37.47 E-value=7.7 Score=23.63 Aligned_cols=15 Identities=27% Similarity=0.795 Sum_probs=12.5
Q ss_pred EEEEecCCCCeeeec
Q 006051 147 RTYMCRKCKHMFPVY 161 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~ 161 (663)
-.|+|..||+.+.+.
T Consensus 5 evYkC~~CGNiVeV~ 19 (36)
T d1dfxa2 5 EVYKCTHCGNIVEVL 19 (36)
T ss_dssp CEEECTTTCCEEECS
T ss_pred cEEEecccCcEEEEE
Confidence 379999999997764
No 299
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=37.06 E-value=11 Score=23.20 Aligned_cols=14 Identities=0% Similarity=0.214 Sum_probs=11.1
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
.+.|+.||..+.+.
T Consensus 2 R~vc~~cG~~Yh~~ 15 (37)
T d2ak3a2 2 RWIHPGSGRVYNIE 15 (37)
T ss_dssp EEEETTTTEEEETT
T ss_pred ceeeCCcCChhhhc
Confidence 47899999987654
No 300
>d1vzia2 g.41.5.2 (A:1-37) Desulfoferrodoxin N-terminal domain {Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]}
Probab=36.99 E-value=8.3 Score=23.64 Aligned_cols=15 Identities=27% Similarity=0.782 Sum_probs=12.5
Q ss_pred EEEEecCCCCeeeec
Q 006051 147 RTYMCRKCKHMFPVY 161 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~ 161 (663)
-.|+|..||+.+.+.
T Consensus 5 evYkC~~CGNiVeV~ 19 (37)
T d1vzia2 5 QVYKCEVCGNIVEVL 19 (37)
T ss_dssp CEEECTTTCCEEEEE
T ss_pred cEEEecccCcEEEEE
Confidence 379999999998764
No 301
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=36.77 E-value=9.1 Score=34.50 Aligned_cols=24 Identities=17% Similarity=0.459 Sum_probs=18.6
Q ss_pred cccccccCCCchHHH--HHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQ--FLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~--lar~ia~~~ 371 (663)
.++++..|+|||||. ++-.+.++.
T Consensus 59 ~dvvi~a~TGsGKTlayllp~l~~l~ 84 (238)
T d1wrba1 59 RDIMACAQTGSGKTAAFLIPIINHLV 84 (238)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCcceeeHHHHHHHHH
Confidence 689999999999998 444555543
No 302
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=36.14 E-value=77 Score=25.81 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHH
Q 006051 526 WPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAI 605 (663)
Q Consensus 526 ~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai 605 (663)
+|..-+.+.+... .-...+|.+|.+.+...... ..+.+.+-|-..+.-..+++|+.+|+..|+
T Consensus 2 lP~a~I~rilk~~--~~~~ris~da~~~l~~~~~~---------------~~~~Ia~eA~~l~~~~~rKTi~~edi~~a~ 64 (151)
T d1f1ea_ 2 LPKAAIERIFRQG--IGERRLSQDAKDTIYDFVPT---------------MAEYVANAAKSVLDASGKKTLMEEHLKALA 64 (151)
T ss_dssp CCHHHHHHHHHTT--STTCEECHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHTTTCSEECHHHHHHHH
T ss_pred CCccHHHHHHHHh--CCccccCHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 3445555555311 12346899999999887533 355667777888888899999999999998
Q ss_pred HHHH
Q 006051 606 LCIE 609 (663)
Q Consensus 606 ~l~~ 609 (663)
+...
T Consensus 65 ~~~~ 68 (151)
T d1f1ea_ 65 DVLM 68 (151)
T ss_dssp HHHT
T ss_pred Hhcc
Confidence 7653
No 303
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.90 E-value=8.3 Score=34.45 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=14.4
Q ss_pred cccccccCCCchHHHH
Q 006051 348 SHLLLVGDPGTGKSQF 363 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l 363 (663)
.+++...++|||||..
T Consensus 55 ~dvi~~a~TGSGKTla 70 (222)
T d2j0sa1 55 RDVIAQSQSGTGKTAT 70 (222)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CCeEEEcCcchhhhhh
Confidence 6899999999999963
No 304
>d1dxga_ g.41.5.2 (A:) Desulforedoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=35.44 E-value=9.1 Score=23.26 Aligned_cols=14 Identities=29% Similarity=0.769 Sum_probs=12.1
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
.|+|..||+.+.+.
T Consensus 6 vYkC~~CGNiVeV~ 19 (36)
T d1dxga_ 6 VYKCELCGQVVKVL 19 (36)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEeccCCcEEEEE
Confidence 79999999997764
No 305
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=35.16 E-value=7.1 Score=36.02 Aligned_cols=24 Identities=25% Similarity=0.282 Sum_probs=19.1
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
.=+++.|-=|+|||+++-++|..+
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~l 32 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRL 32 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCcChHHHHHHHHHHHH
Confidence 346789999999999887777643
No 306
>d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]}
Probab=34.42 E-value=29 Score=26.79 Aligned_cols=42 Identities=19% Similarity=0.307 Sum_probs=30.5
Q ss_pred EEEEEEecCcc--cceeeCCEEEEEEEEeeecCCCCcCcccccceEEEeeeeee
Q 006051 221 SILVILKDDLV--DIVKAGDDVIVTGILTAKWSPDLKDVRCDLDPVLIANHVRR 272 (663)
Q Consensus 221 si~V~L~~dLv--~~~~pGd~V~v~GIl~~~~~~~~~~~~~~~~~~~~a~~i~~ 272 (663)
.|.|.+.+++- -.+.|+|+|+|.|-+-..|. ...+++.+|+.
T Consensus 62 ~I~VeId~~~w~g~~v~p~~kV~i~GevDk~~~----------~~eIdV~~I~~ 105 (106)
T d1nnxa_ 62 TINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWN----------SVEIDVKQIRK 105 (106)
T ss_dssp EEEEECCGGGSTTCCCCTTSCEEEEEEEEEETT----------EEEEEEEEEEE
T ss_pred cEEEEEChhhcCCcccCCCCEEEEEEEEcCCCC----------ceEEEEEEEEE
Confidence 36777777765 37999999999999986553 34566666653
No 307
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.29 E-value=7.5 Score=22.44 Aligned_cols=13 Identities=31% Similarity=0.825 Sum_probs=10.6
Q ss_pred EEEecCCCCeeee
Q 006051 148 TYMCRKCKHMFPV 160 (663)
Q Consensus 148 ~f~C~~C~~~~~~ 160 (663)
-|.|..|+..|..
T Consensus 3 Py~C~~C~k~F~~ 15 (28)
T d1a1ia2 3 PFQCRICMRNFSR 15 (28)
T ss_dssp CEECTTTCCEESC
T ss_pred CccCCCCcCEecc
Confidence 3899999998754
No 308
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=33.67 E-value=17 Score=22.11 Aligned_cols=14 Identities=21% Similarity=0.752 Sum_probs=10.7
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
.+.|+.||..+.+.
T Consensus 2 Rr~C~~CG~~Yh~~ 15 (35)
T d1zina2 2 RRICRNCGATYHLI 15 (35)
T ss_dssp EEEETTTCCEEETT
T ss_pred ccCCcCcCchhccc
Confidence 36899999987643
No 309
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=32.73 E-value=20 Score=35.18 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEeC
Q 006051 321 TVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTG 379 (663)
Q Consensus 321 ~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~~ 379 (663)
.+.+.+.-.|-.| ..+.+|.|-+|+|||.++..+.+..+++++...
T Consensus 18 ~aI~~l~~~l~~g-------------~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt 63 (413)
T d1t5la1 18 QAIAKLVDGLRRG-------------VKHQTLLGATGTGKTFTISNVIAQVNKPTLVIA 63 (413)
T ss_dssp HHHHHHHHHHHHT-------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHhcC-------------CCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEe
Confidence 4455555555443 357889999999999999998888888776543
No 310
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.33 E-value=1.1e+02 Score=25.50 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHH
Q 006051 524 DIWPLAMLRRYIYFVKGYFKPILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAIT 603 (663)
Q Consensus 524 ~~~~~~~l~~~i~~~r~~~~p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~ 603 (663)
-.+|..-+.+++.-. ....++..|.-+|......+ ...++++|...|+-..+..|+++|+..
T Consensus 98 L~fPV~rv~rlLk~~---~a~RVs~~A~vyLaavLEyl---------------~aeILelAgn~a~~~krkrItp~dI~l 159 (172)
T d1q9ca_ 98 LSLPVEKIHPLLKEV---LGYKIDHQVSVYIVAVLEYI---------------SADILKLAGNYVRNIRHYEITKQDIKV 159 (172)
T ss_dssp -CCCHHHHHHHHHHH---HSSCCCHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHTCSBCCHHHHHH
T ss_pred ceecHHHHHHHHHhc---cccccccchHHHHHHHHHHH---------------HHHHHHHHHHHHHHcCCceecHHHHHH
Confidence 357888888887543 36688999887777653322 345678888889888999999999999
Q ss_pred HHH
Q 006051 604 AIL 606 (663)
Q Consensus 604 Ai~ 606 (663)
|+.
T Consensus 160 Ai~ 162 (172)
T d1q9ca_ 160 AMC 162 (172)
T ss_dssp HHH
T ss_pred HHh
Confidence 985
No 311
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=32.16 E-value=7.4 Score=36.45 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=19.3
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
-|.++|+.++|||+|+.++..
T Consensus 26 ~ivVvG~~ssGKSSliNaLlG 46 (306)
T d1jwyb_ 26 QIVVVGSQSSGKSSVLENIVG 46 (306)
T ss_dssp EEEEEECSSSSHHHHHHHHHT
T ss_pred eEEEEeCCCCCHHHHHHHHhC
Confidence 488999999999999999986
No 312
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=31.54 E-value=29 Score=22.27 Aligned_cols=12 Identities=25% Similarity=0.838 Sum_probs=9.9
Q ss_pred EEEecCCCCeee
Q 006051 148 TYMCRKCKHMFP 159 (663)
Q Consensus 148 ~f~C~~C~~~~~ 159 (663)
.|+|..||.++.
T Consensus 3 ~y~C~~CgyiYd 14 (45)
T d6rxna_ 3 KYVCNVCGYEYD 14 (45)
T ss_dssp CEEETTTCCEEC
T ss_pred CeEeCCCCeEEC
Confidence 599999998754
No 313
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.13 E-value=8.8 Score=23.04 Aligned_cols=14 Identities=29% Similarity=0.688 Sum_probs=11.3
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
-|+|..||..|...
T Consensus 7 py~C~~Cgk~F~~~ 20 (33)
T d1x6ea1 7 PYGCVECGKAFSRS 20 (33)
T ss_dssp CEECSSSCCEESSH
T ss_pred CeeCCCCCCEeCch
Confidence 48999999988643
No 314
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=30.99 E-value=8.3 Score=34.39 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=19.8
Q ss_pred ccccccccCCCchHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia 368 (663)
.+||.++|--+.|||+|+..+.
T Consensus 3 ~iNi~viGHVd~GKTTL~~~Ll 24 (224)
T d1jnya3 3 HLNLIVIGHVDHGKSTLVGRLL 24 (224)
T ss_dssp EEEEEEEESTTSSHHHHHHHHH
T ss_pred ccEEEEEecCCCCHHHHHHHHH
Confidence 4899999999999999998774
No 315
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=30.76 E-value=42 Score=24.73 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=39.3
Q ss_pred CccCHHHHHHHHHHHHHHHhcccCCCccccHhHHHHHHHHHHHHHhccCCCccChhhHHHHHHHHH
Q 006051 544 PILTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIE 609 (663)
Q Consensus 544 p~ls~ea~~~l~~~y~~~r~~~~~~~~~~t~R~Le~lirla~a~A~l~~~~~V~~~Dv~~Ai~l~~ 609 (663)
..++.+|..++...... -+..|..-|..+|.-..|.+|+.+|+..|+.-++
T Consensus 17 ~~iskeA~~~i~~aae~---------------FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~~ 67 (89)
T d2bykb1 17 ASVSKEARAAIARAASV---------------FAIFVTSSSTALAHKQNHKTITAKDILQTLTELD 67 (89)
T ss_dssp CEECHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHCC
Confidence 35889998888766322 3455667777889999999999999999997654
No 316
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=30.75 E-value=9.6 Score=40.30 Aligned_cols=23 Identities=22% Similarity=0.459 Sum_probs=19.2
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+-.|++.|++|+|||.-++.+-+
T Consensus 86 ~QsIiisGeSGsGKTe~~k~il~ 108 (684)
T d1lkxa_ 86 NQCVIISGESGAGKTEASKKIMQ 108 (684)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHHHH
Confidence 35799999999999998776654
No 317
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=30.71 E-value=12 Score=35.89 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=14.8
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
..|+-+|.+|+|||..+
T Consensus 81 ~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 81 GTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEecccCCCCcceee
Confidence 56889999999999765
No 318
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.69 E-value=7.9 Score=36.05 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=19.3
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
-|.++|+-++|||+|+.++..
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg 48 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVG 48 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHT
T ss_pred eEEEEcCCCCCHHHHHHHHhC
Confidence 488999999999999999986
No 319
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=30.68 E-value=26 Score=23.29 Aligned_cols=12 Identities=25% Similarity=0.805 Sum_probs=10.1
Q ss_pred EEEecCCCCeee
Q 006051 148 TYMCRKCKHMFP 159 (663)
Q Consensus 148 ~f~C~~C~~~~~ 159 (663)
.|+|..||.++.
T Consensus 3 ~y~C~~CgyiYd 14 (52)
T d2dsxa1 3 IYVCTVCGYEYD 14 (52)
T ss_dssp CEEETTTCCEEC
T ss_pred eEEeCCCCeEEC
Confidence 589999998764
No 320
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=30.20 E-value=20 Score=21.73 Aligned_cols=14 Identities=14% Similarity=0.655 Sum_probs=10.7
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
.+.|+.||..+.+.
T Consensus 2 R~~C~~CG~~Yh~~ 15 (35)
T d1s3ga2 2 RRICKVCGTSYHLL 15 (35)
T ss_dssp EEEETTTCCEEETT
T ss_pred ccCCcCcCchhccc
Confidence 36899999887643
No 321
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=29.49 E-value=10 Score=40.20 Aligned_cols=23 Identities=30% Similarity=0.550 Sum_probs=18.7
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+-.|++.|++|+|||.-++.+.+
T Consensus 125 nQsIiisGeSGaGKTe~~k~il~ 147 (712)
T d1d0xa2 125 NQSLLITGESGAGKTENTKKVIQ 147 (712)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHH
Confidence 36799999999999986666544
No 322
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.08 E-value=14 Score=34.91 Aligned_cols=17 Identities=18% Similarity=0.495 Sum_probs=15.3
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
..|+-+|.+|+|||..+
T Consensus 77 ~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 77 GTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cceeeecccCCCCceec
Confidence 67899999999999875
No 323
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.99 E-value=6.2 Score=24.22 Aligned_cols=12 Identities=33% Similarity=0.520 Sum_probs=9.8
Q ss_pred eeeCCEEEEEEE
Q 006051 234 VKAGDDVIVTGI 245 (663)
Q Consensus 234 ~~pGd~V~v~GI 245 (663)
.-|||+|+.+|-
T Consensus 10 FP~GDRVTFnGK 21 (40)
T d1v6ga2 10 FPPGDRVTFNGK 21 (40)
T ss_dssp CCSSSCEEEETT
T ss_pred CCCCCeEEEcCc
Confidence 457999999984
No 324
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=26.70 E-value=11 Score=40.44 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=17.1
Q ss_pred ccccccccCCCchHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAA 368 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia 368 (663)
+-.|++.|++|+|||.-++.+.
T Consensus 123 ~QsIiisGeSGaGKTe~~K~il 144 (794)
T d2mysa2 123 NQSILITGESGAGKTVNTKRVI 144 (794)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHH
Confidence 3679999999999997555433
No 325
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=26.18 E-value=13 Score=33.95 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=17.0
Q ss_pred cccccccCCCchHHHHHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.=|.+.|-=|+|||+++-.+|.
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~ 42 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAV 42 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 3467789999999997666654
No 326
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=25.93 E-value=13 Score=39.40 Aligned_cols=23 Identities=26% Similarity=0.497 Sum_probs=18.8
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+-.|++.|++|+|||.-++.+.+
T Consensus 91 ~Q~IiisGeSGaGKTe~~k~il~ 113 (710)
T d1br2a2 91 DQSILCTGESGAGKTENTKKVIQ 113 (710)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHH
Confidence 36799999999999997666654
No 327
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=25.22 E-value=13 Score=39.94 Aligned_cols=23 Identities=26% Similarity=0.429 Sum_probs=18.2
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+-.|++.|++|+|||.-++.+.+
T Consensus 121 nQ~IiisGESGaGKTe~~K~il~ 143 (789)
T d1kk8a2 121 NQSCLITGESGAGKTENTKKVIM 143 (789)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHH
Confidence 36799999999999987555443
No 328
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=25.15 E-value=32 Score=25.56 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=30.1
Q ss_pred HHHHHHHhccCCCccChhhHHHHHHHHHhhhhhhh
Q 006051 582 RLAQAHARLMFRNEVTRLDAITAILCIESSMTTSA 616 (663)
Q Consensus 582 rla~a~A~l~~~~~V~~~Dv~~Ai~l~~~s~~~~~ 616 (663)
++..+..+++.+..++++|+.++++=++.++-.+-
T Consensus 8 ~l~~a~~~l~g~~~i~E~~i~~~l~eir~ALLeAD 42 (88)
T d1ls1a1 8 RLQEAIGRLRGRGRITEEDLKATLREIRRALMDAD 42 (88)
T ss_dssp HHHHHHHTTTTSCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcc
Confidence 56688899999999999999999999888886653
No 329
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=25.15 E-value=14 Score=39.37 Aligned_cols=23 Identities=26% Similarity=0.619 Sum_probs=18.6
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
+-.|++.|++|+|||.-++.+.+
T Consensus 94 ~Q~IiisGeSGsGKTe~~k~il~ 116 (730)
T d1w7ja2 94 NQSIIVSGESGAGKTVSAKYAMR 116 (730)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHH
Confidence 36799999999999997666544
No 330
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.01 E-value=20 Score=23.30 Aligned_cols=28 Identities=11% Similarity=0.392 Sum_probs=21.9
Q ss_pred hhhcccCHHHHHHHHhChHHHHHHHHHH
Q 006051 45 AELLDEDPEIAHLVFSKPADYLRFFEDA 72 (663)
Q Consensus 45 ~~L~~~dp~La~~l~~~P~~~l~~~~~a 72 (663)
..|..-.|.|-+.++.+|+.++..+-+|
T Consensus 29 e~ls~ryp~lre~im~npe~fismllea 56 (57)
T d1x3zb1 29 ENISARYPQLREHIMANPEVFVSMLLEA 56 (57)
T ss_dssp HHHHTTCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHhhHHHHHHHHhCHHHHHHHHHhh
Confidence 4555667899999999999988876554
No 331
>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.96 E-value=29 Score=22.34 Aligned_cols=29 Identities=17% Similarity=0.508 Sum_probs=19.6
Q ss_pred EEEEecCCCCeeeecccccccccccCCCCCCCCCCCCCCCCc
Q 006051 147 RTYMCRKCKHMFPVYPELETRNSIVLPSHCPSQRSKPCEGTN 188 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~~~~~~~~~~~~p~~Cp~~~~~~C~~~~ 188 (663)
..|.|..||..+.+.+ ..|..|- .|+.+-
T Consensus 3 v~YiCgeCg~~~~l~~--------~d~irCr-----eCG~RI 31 (46)
T d1twfl_ 3 LKYICAECSSKLSLSR--------TDAVRCK-----DCGHRI 31 (46)
T ss_dssp CCEECSSSCCEECCCT--------TSTTCCS-----SSCCCC
T ss_pred eEEEcccCCCceEeCC--------CCcEEec-----cCCcEE
Confidence 3699999998865432 2367783 587653
No 332
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=24.51 E-value=19 Score=34.37 Aligned_cols=17 Identities=29% Similarity=0.509 Sum_probs=15.3
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
.-|+-||.+|+|||..+
T Consensus 88 ~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 88 VCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred ceeeeeccCCCCCceee
Confidence 57899999999999876
No 333
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=24.14 E-value=17 Score=32.27 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=20.7
Q ss_pred cccccccCCCchHHHHHHHHHHhc
Q 006051 348 SHLLLVGDPGTGKSQFLKFAAKLS 371 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar~ia~~~ 371 (663)
+++.++|-...|||+|+.++....
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~ 33 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDS 33 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHT
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHc
Confidence 579999999999999999986543
No 334
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=24.09 E-value=21 Score=33.93 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=14.8
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
.-|+.+|..|+|||..+
T Consensus 82 ~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 82 CTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEEECTTSSHHHHH
T ss_pred ceEEeeeeccccceEEe
Confidence 56889999999999765
No 335
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=24.03 E-value=13 Score=33.54 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=20.4
Q ss_pred ccccccccCCCchHHHHHHHHHH
Q 006051 347 ESHLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 347 ~~~iLL~G~pGtGKs~lar~ia~ 369 (663)
.+||.++|-.+.|||+|+..+..
T Consensus 24 ~iNi~iiGHVD~GKSTL~~~Ll~ 46 (245)
T d1r5ba3 24 HVNIVFIGHVDAGKSTLGGNILF 46 (245)
T ss_dssp EEEEEEEECGGGTHHHHHHHHHH
T ss_pred ceEEEEEeeCCCCHHHHHHHHHH
Confidence 47899999999999999998854
No 336
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.86 E-value=12 Score=36.91 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=17.0
Q ss_pred cccccccCCCchHHHH-HHHHHHh
Q 006051 348 SHLLLVGDPGTGKSQF-LKFAAKL 370 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~l-ar~ia~~ 370 (663)
.++|+.+.+|||||.. +..++.+
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~l 40 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRL 40 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHH
Confidence 3689999999999985 3444444
No 337
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=23.61 E-value=44 Score=32.44 Aligned_cols=52 Identities=23% Similarity=0.285 Sum_probs=36.1
Q ss_pred cccCchh-HHHHHHHHHHhCCceeecCCCCccccccccccccCCCchHHHHHHHHHHhcCCceEEe
Q 006051 314 PQVFGLF-TVKLAVALTLIGGVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITT 378 (663)
Q Consensus 314 p~i~G~~-~~K~aill~l~~g~~~~~~~~~~~r~~~~iLL~G~pGtGKs~lar~ia~~~~~~~~~~ 378 (663)
|.--|.. .+.+.++-.|-.| ...++|.|-+|+||+.++-++.+..+++++..
T Consensus 7 ~~p~~dqp~aI~~l~~~L~~g-------------~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvV 59 (408)
T d1c4oa1 7 PSPKGDQPKAIAGLVEALRDG-------------ERFVTLLGATGTGKTVTMAKVIEALGRPALVL 59 (408)
T ss_dssp CCCCTTHHHHHHHHHHHHHTT-------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCHHHHHHHHHHHhcC-------------CCcEEEecCCCCHHHHHHHHHHHHhCCCEEEE
Confidence 3333443 4455555555443 23478999999999999999998888877653
No 338
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=23.14 E-value=17 Score=34.94 Aligned_cols=17 Identities=24% Similarity=0.495 Sum_probs=15.0
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
..|+-||.+|+|||..+
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 56889999999999874
No 339
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.07 E-value=15 Score=22.34 Aligned_cols=15 Identities=27% Similarity=0.806 Sum_probs=11.7
Q ss_pred EEEEecCCCCeeeec
Q 006051 147 RTYMCRKCKHMFPVY 161 (663)
Q Consensus 147 ~~f~C~~C~~~~~~~ 161 (663)
.-|.|..||..|...
T Consensus 7 kPy~C~~C~k~F~~~ 21 (36)
T d1x6ha2 7 KPYACSHCDKTFRQK 21 (36)
T ss_dssp CCEECSSSSCEESSH
T ss_pred CCEECCCCCCCcCCH
Confidence 358999999987643
No 340
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=22.62 E-value=18 Score=34.88 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=14.8
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
..|+-+|..|+|||..+
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEeeccCCCccceEe
Confidence 56899999999999764
No 341
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=22.44 E-value=24 Score=32.36 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=16.5
Q ss_pred ccccccCCCchHHHHHHHHHH
Q 006051 349 HLLLVGDPGTGKSQFLKFAAK 369 (663)
Q Consensus 349 ~iLL~G~pGtGKs~lar~ia~ 369 (663)
+.++.-|+|+|||.++-.+++
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~ 150 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLAR 150 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHH
T ss_pred CceeEEEcccCccHHHHHHHH
Confidence 467778999999988766653
No 342
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B (Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.29 E-value=20 Score=24.46 Aligned_cols=28 Identities=7% Similarity=0.427 Sum_probs=23.8
Q ss_pred chhhcccCHHHHHHHHhChHHHHHHHHH
Q 006051 44 FAELLDEDPEIAHLVFSKPADYLRFFED 71 (663)
Q Consensus 44 ~~~L~~~dp~La~~l~~~P~~~l~~~~~ 71 (663)
+..|-.-+|.|+..|.++|.+++.++.+
T Consensus 29 Lqql~~~NP~L~q~I~~nqe~Fl~llne 56 (58)
T d2f4mb1 29 LQQIGRENPQLLQQISQHQEHFIQMLNE 56 (58)
T ss_dssp HHHHHHHCHHHHHHHHHSHHHHHHHHTS
T ss_pred HHHHHhhCHHHHHHHHHCHHHHHHHHcC
Confidence 3577788999999999999999988753
No 343
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.28 E-value=33 Score=21.12 Aligned_cols=14 Identities=0% Similarity=-0.009 Sum_probs=10.8
Q ss_pred EEEecCCCCeeeec
Q 006051 148 TYMCRKCKHMFPVY 161 (663)
Q Consensus 148 ~f~C~~C~~~~~~~ 161 (663)
...|+.||..+.+.
T Consensus 2 Rr~C~~cG~~Yh~~ 15 (38)
T d1akya2 2 RLIHPASGRSYHKI 15 (38)
T ss_dssp EEECTTTCCEEETT
T ss_pred ccCCcCccchhhhh
Confidence 36899999987654
No 344
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=22.13 E-value=9.6 Score=22.09 Aligned_cols=12 Identities=25% Similarity=0.935 Sum_probs=9.7
Q ss_pred EEecCCCCeeee
Q 006051 149 YMCRKCKHMFPV 160 (663)
Q Consensus 149 f~C~~C~~~~~~ 160 (663)
|.|..||..|..
T Consensus 3 ~~C~~C~k~F~~ 14 (29)
T d2adra1 3 FVCEVCTRAFAR 14 (29)
T ss_dssp BCCTTTCCCBSC
T ss_pred CCCCCCCCCCCC
Confidence 789999988753
No 345
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.03 E-value=16 Score=22.12 Aligned_cols=13 Identities=31% Similarity=0.935 Sum_probs=10.7
Q ss_pred EEEecCCCCeeee
Q 006051 148 TYMCRKCKHMFPV 160 (663)
Q Consensus 148 ~f~C~~C~~~~~~ 160 (663)
-|.|..|+..|..
T Consensus 7 Py~C~~C~k~F~~ 19 (35)
T d1srka_ 7 PFVCRICLSAFTT 19 (35)
T ss_dssp CEECSSSCCEESS
T ss_pred cccCCCCCCcccC
Confidence 4899999998764
No 346
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.60 E-value=30 Score=30.96 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=23.8
Q ss_pred hccCCeeecccccc-cChhhHHhHHHHHHh
Q 006051 407 LADGGLCCIDEFDS-MREHDRATIHEAMEQ 435 (663)
Q Consensus 407 ~a~~gvl~iDEid~-l~~~~~~~L~~~me~ 435 (663)
..++++++|||.+. +.+..+..|.+++.+
T Consensus 223 ~~~~~llllDEp~~~Ld~~~~~~l~~~l~~ 252 (292)
T g1f2t.1 223 AGEISLLILDEPTPYLDEERRRKLITIMER 252 (292)
T ss_dssp HSSCSEEEEESCSCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 35678999999865 888888899888865
No 347
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=21.50 E-value=18 Score=34.82 Aligned_cols=17 Identities=24% Similarity=0.546 Sum_probs=14.9
Q ss_pred cccccccCCCchHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFL 364 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~la 364 (663)
.-|+-||.+|+|||..+
T Consensus 115 ~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 115 ATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred ceEEeeccCCCCCceee
Confidence 56888999999999876
No 348
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.29 E-value=17 Score=32.64 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=21.8
Q ss_pred ccccccccccCCCchHHHHHHHHHHh
Q 006051 345 RGESHLLLVGDPGTGKSQFLKFAAKL 370 (663)
Q Consensus 345 r~~~~iLL~G~pGtGKs~lar~ia~~ 370 (663)
+..+||.++|-.+.|||+|+..+...
T Consensus 4 k~~iNi~iiGHvD~GKsTl~~~ll~~ 29 (239)
T d1f60a3 4 KSHINVVVIGHVDSGKSTTTGHLIYK 29 (239)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHH
Confidence 34489999999999999999888643
No 349
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.13 E-value=10 Score=21.00 Aligned_cols=12 Identities=17% Similarity=0.825 Sum_probs=9.3
Q ss_pred EEEecCCCCeee
Q 006051 148 TYMCRKCKHMFP 159 (663)
Q Consensus 148 ~f~C~~C~~~~~ 159 (663)
.|+|+-|+....
T Consensus 2 k~qcphc~tiia 13 (28)
T d2ct1a1 2 KFHCPHCDTVIA 13 (28)
T ss_dssp SEECSSSSCEES
T ss_pred CccCCcchhhee
Confidence 588999987654
No 350
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.08 E-value=19 Score=20.30 Aligned_cols=12 Identities=25% Similarity=0.847 Sum_probs=9.8
Q ss_pred EEEecCCCCeee
Q 006051 148 TYMCRKCKHMFP 159 (663)
Q Consensus 148 ~f~C~~C~~~~~ 159 (663)
-|.|..||..|.
T Consensus 3 Pf~C~~CgrkFA 14 (28)
T d1a1ia3 3 PFACDICGRKFA 14 (28)
T ss_dssp CEECTTTCCEES
T ss_pred Ccccchhhhhhh
Confidence 388999998874
No 351
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.07 E-value=17 Score=22.09 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=10.7
Q ss_pred EEEecCCCCeeee
Q 006051 148 TYMCRKCKHMFPV 160 (663)
Q Consensus 148 ~f~C~~C~~~~~~ 160 (663)
-|.|..|+..|..
T Consensus 8 P~~C~~C~k~F~~ 20 (36)
T d2ct1a2 8 PYECYICHARFTQ 20 (36)
T ss_dssp SEECTTTCCEESC
T ss_pred CEeCCCCcccccc
Confidence 4899999988754
No 352
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.31 E-value=15 Score=34.74 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=15.3
Q ss_pred cccccccCCCchHHHHHH
Q 006051 348 SHLLLVGDPGTGKSQFLK 365 (663)
Q Consensus 348 ~~iLL~G~pGtGKs~lar 365 (663)
.-|+.||.+|+|||..+-
T Consensus 86 ~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 86 CSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEeeeccccccceeee
Confidence 568899999999998763
Done!