Query 006052
Match_columns 663
No_of_seqs 169 out of 714
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 14:41:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ksi_A Copper amine oxidase; P 100.0 1E-182 3E-187 1540.7 69.3 630 27-663 2-640 (642)
2 3sxx_A Peroxisomal primary ami 100.0 9E-182 3E-186 1531.2 67.0 615 26-661 21-664 (692)
3 3loy_A Copper amine oxidase; T 100.0 8E-179 3E-183 1499.4 66.7 605 27-658 1-633 (633)
4 1w6g_A Phenylethylamine oxidas 100.0 1E-176 3E-181 1488.9 62.5 608 24-660 4-629 (646)
5 1spu_A Copper amine oxidase; o 100.0 9E-173 3E-177 1480.9 66.9 619 23-659 89-727 (727)
6 1tu5_A Copper amine oxidase, l 100.0 3E-156 9E-161 1337.2 55.4 602 25-657 38-705 (746)
7 1w7c_A Lysyl oxidase; AMNE oxi 100.0 6E-156 2E-160 1332.5 57.2 596 24-657 15-692 (747)
8 3hi7_A Amiloride-sensitive ami 100.0 4E-148 1E-152 1264.0 60.9 604 27-658 10-694 (731)
9 3pgb_A Putative uncharacterize 100.0 5E-146 2E-150 1247.8 61.1 604 24-657 62-736 (797)
10 2d0s_A Cytochrome C, cytochrom 19.4 64 0.0022 25.2 2.7 20 28-47 58-77 (79)
No 1
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=1e-182 Score=1540.73 Aligned_cols=630 Identities=54% Similarity=0.993 Sum_probs=588.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeCCeeEEEEEeCC
Q 006052 27 YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLS 106 (663)
Q Consensus 27 ~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~~~~~E~~V~l~ 106 (663)
.|||||||++||++|++||+++... +...++|++|+|.||+|++|++||+..++++|+|+|+|+++.+++++|++|+|+
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~-~~~~~~F~~i~L~EP~K~~v~~~l~~~~~~~P~R~A~vv~~~~~~~~E~vV~L~ 80 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPI-SNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLR 80 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCT-TTCCEEEEEEEECCCCHHHHHHHHHCGGGCCCCCEEEEEEEETTEEEEEEEETT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccC-CCCceEEEEEECCCCCHHHHHHHHhhcCCCCCCcEEEEEEEeCCeEEEEEEECC
Confidence 5999999999999999999998763 235789999999999999999998543346789999999999999999999999
Q ss_pred CCeEEEEEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCCCCCCeEEccccccccCCccccCCCCceEEEEEEEE
Q 006052 107 LQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYY 186 (663)
Q Consensus 107 ~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~~~~~v~~d~~~~g~~~~~~~~~~~~~R~~~~~~f~ 186 (663)
.+++++++..+..+||+++.||+.++++++++||.|+++|+++|+++.+|.|++|++||++.. + ++|++|++||+
T Consensus 81 ~~~v~~~~~~~~~g~p~~~~~E~~~~e~~~~~~p~~~~~~~~~gl~~~~v~~~pw~~g~~~~~--~---~~Rl~~~~~~~ 155 (642)
T 1ksi_A 81 IRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEE--K---NVRTVRLDCFM 155 (642)
T ss_dssp TTEEEEEEECCSSCBCCCCHHHHHHHTTGGGGCHHHHHHHHHTTCCGGGEEEEEECCCCCSCS--C---CCCEEEEEEEE
T ss_pred CCcEEEEEeccCCCcCCCCHHHHHHHHHHhhcCHHHHHHHHhcCCCccceEEecccccCCCCC--C---CcEEEEEEEEE
Confidence 999998776665569999999999999999999999999999999989999999999987642 2 67999999999
Q ss_pred ecCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCcCccccCCCCCCCCCCCceeeCCCCCeEEEeCeEE--
Q 006052 187 MNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMI-- 264 (663)
Q Consensus 187 ~~~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g~~v-- 264 (663)
+.+++|+|+|||+||+++||+++|||++|++.+.+++|+.++.+|.++.+.++.|+++||++|+||||+||+|+|++|
T Consensus 156 ~~~~~n~Ya~Pl~Gl~~vvD~~~~~V~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~QPeG~sF~V~G~~V~W 235 (642)
T 1ksi_A 156 KESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSW 235 (642)
T ss_dssp CSSCSCGGGSEECSEEEEEETTTTEEEEEEECCCCCCCCCTTCCCCSTTCCSCCCCCCCCBEEECTTCCSCEEETTEEEE
T ss_pred ecCCCcccccccCceEEEEECCCCEEEEEEccCCccCCCCCCCCccccccCCCCCCCCCCceecCCCCCCEEEeCcEEee
Confidence 988899999999999999999999999999887777787777789887766667999999999999999999999999
Q ss_pred -------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCCCCCCC
Q 006052 265 -------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCP 337 (663)
Q Consensus 265 -------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCp 337 (663)
|||+|||||||||+|.|.+.|++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++|||||
T Consensus 236 ~~W~f~vgf~~reGlvL~dv~y~d~~~g~~r~V~YrlSl~Em~VPYgdP~~~~~~k~~fD~GeyG~G~~a~~L~~GcDCp 315 (642)
T 1ksi_A 236 ANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCP 315 (642)
T ss_dssp TTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCBTTTBC
T ss_pred CCceEEEecCCCcccEEEEEEEecCCCCCceEEEEEeeeeeEEEeCCCCCcccccceeeeccccCccccccccccCCCCC
Confidence 9999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEEEEEeeCc
Q 006052 338 PNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSG 417 (663)
Q Consensus 338 g~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dG 417 (663)
|+|+|||+++++++|+|++++|||||||+| +||||||+|+++++..++.+|++++||||+|+|||||||||+|+|||||
T Consensus 316 g~i~Y~D~~~~~~~G~p~~~~naiCihE~d-~gilwkH~~~r~~~~~~~~v~r~r~LVvr~i~TV~NYdYif~w~F~qdG 394 (642)
T 1ksi_A 316 PHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNADNVIDWEFKASG 394 (642)
T ss_dssp TTCEEEEEEEECTTCCEEEEEEEEEEEEEE-EEEEEEEEECCSTTCCEEEEEEEEEEEEEEEEEETTEEEEEEEEECTTS
T ss_pred CCCEEeeeEEecCCCCEEEcCCEEEEEecc-CCcceeeccccCCCceeeeeeeccEEEEEEEEeecccceEEEEEEecCc
Confidence 999999999999999999999999999999 9999999999987654556777779999999999999999999999999
Q ss_pred cEEEEEeeeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCCc
Q 006052 418 SIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRK 497 (663)
Q Consensus 418 tIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~ 497 (663)
+||+||||||||+|+++++...+++++.+|||+|+++++|++|||+|||||||||||.+|||+++|+++++.+.++||++
T Consensus 395 ~Ie~ev~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~np~~ 474 (642)
T 1ksi_A 395 SIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRK 474 (642)
T ss_dssp CEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEEECCSSCSSCS
T ss_pred eEEEEEEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEEEeeEecCCCCCCCCCc
Confidence 99999999999999887664322223478999999999999999999999999999999999999999999877799999
Q ss_pred eeEEEEEeeecChhhhhhhcCCCCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhccccccceeEEeeeCC
Q 006052 498 SYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNK 577 (663)
Q Consensus 498 ~~~~~~~~~~~tE~~a~~~~~~~~r~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~ 577 (663)
++|++++++++||++|++++++.+|+|+|+|++++|++|+|+||||+|+++++++++++|+.++||+||+|+||||||+|
T Consensus 475 ~~~~~~~t~~~tE~ea~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~Ra~fa~~~lwVT~y~d 554 (642)
T 1ksi_A 475 SYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNR 554 (642)
T ss_dssp EEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCT
T ss_pred ceEEEEEEEccchhhhhhccCCCceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhhhhhhccccceEEecCCC
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCcccceeeeEEEeCCCCCCCCCCCCCCC
Q 006052 578 SEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQP 657 (663)
Q Consensus 578 ~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~~ 657 (663)
+|+||+|+|+||+++++++..|+++||+|+|+|||+|+|||+||+||+|||||||+++.||+|||+|||++||+||+|++
T Consensus 555 ~E~~a~g~y~~qs~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~PvMp~~~~~f~L~P~nFF~~nP~ldvp~~ 634 (642)
T 1ksi_A 555 TEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSP 634 (642)
T ss_dssp TCCCTTCSCCBTCCSSSSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEECEEEESSCSSSCTTTTCCCC
T ss_pred CccCCCCCCccCCCCCCChhhhhhCCCccccCCcEEEEecccccCCChhhCCCCccceEEEEEEeCCCCCCCCCccCCCC
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 006052 658 KEEYSP 663 (663)
Q Consensus 658 ~~~~~~ 663 (663)
++.-.|
T Consensus 635 ~~~~~~ 640 (642)
T 1ksi_A 635 RDVAWP 640 (642)
T ss_dssp CBCCCC
T ss_pred ccCCCC
Confidence 865443
No 2
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=8.7e-182 Score=1531.16 Aligned_cols=615 Identities=27% Similarity=0.438 Sum_probs=574.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEe--CCeeEEEEE
Q 006052 26 QYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHELIV 103 (663)
Q Consensus 26 ~~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~--~~~~~E~~V 103 (663)
..|||||||++||++|++||+++... ++++|.+|+|.||+|++|++||++. +++|+|+|+|+++. +++++|++|
T Consensus 21 ~~HPLDpLs~~Ei~~a~~iv~~~~~~---~~~~F~~i~L~EP~K~~v~~~~~~~-~~~p~R~a~v~~~~~~~~~~~e~vV 96 (692)
T 3sxx_A 21 PAHPLDPLSTAEIKAATNTVKSYFAG---KKISFNTVTLREPARKAYIQWKEQG-GPLPPRLAYYVILEAGKPGVKEGLV 96 (692)
T ss_dssp CSSTTSCCCHHHHHHHHHHHHHHTTT---SCEEEEEEEEECCCHHHHHHHHHSC-CCCCCCEEEEEEEETTCSSEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCC---CCcEEEEEECCCCCHHHHHHHHhcC-CCCCCeEEEEEEEECCCCCEEEEEE
Confidence 46999999999999999999997764 6899999999999999999999885 46789999999998 678999999
Q ss_pred eCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCC---CCCCeEEccccccccCCccccCCCCceEE
Q 006052 104 DLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL---KLEEVVCESFSVGWYGAEEEEGKNKKRIV 180 (663)
Q Consensus 104 ~l~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~---~~~~v~~d~~~~g~~~~~~~~~~~~~R~~ 180 (663)
||+.++|++|+.+++ .||+++.||+.+||++|++||+|+++|+|||| ++++|+||||++||++.. +. ++||+
T Consensus 97 dl~~~~v~~~~~~~~-~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~~~~~~V~~dpw~~G~~~~~-~~---~~Rl~ 171 (692)
T 3sxx_A 97 DLASLSVIETRALET-VQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERW-GT---GKRLQ 171 (692)
T ss_dssp ETTTTEEEEEEEETT-CCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCGGGGGGEEEEEEECCCCTTT-TT---SSCEE
T ss_pred ECCCCeEEEEEECCC-CcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCccccceEEEccccccccCCC-CC---CceEE
Confidence 999999999999986 58999999999999999999999999999999 456799999999987643 22 68999
Q ss_pred EEEEEEec-CCCCCccCCcCCcEEEEecCccEEEEEECCce-eecCCCCCCcCccccCC--CCCCC-CCCCceeeCCCCC
Q 006052 181 KVMCYYMN-GTVNLFMRPIEGISMTVDLDEMKIIGFQDRVT-VPVPKADETEFRESKIK--PPFRQ-SLKAITVVQPDGP 255 (663)
Q Consensus 181 ~~~~f~~~-~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~-~~~p~~~~~~y~~~~~~--~~~r~-~lkp~~i~QPeG~ 255 (663)
|++||+|. +++|+|||||+ |+++||++++||++|++... .|+|+.+..+|.++.+. +++|+ ++|||.|+||||+
T Consensus 172 ~~~~y~r~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~~~~Y~p~~~~~~~~~r~~d~kP~~i~QPeG~ 250 (692)
T 3sxx_A 172 QALVYYRSDEDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGV 250 (692)
T ss_dssp EEEEEECSSTTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSCCCCCSHHHHHHHHSSCCCCCCCCEEECTTCC
T ss_pred EEEEEEecCCCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCCCCCCChHHccccCCCCCCCCCCceecCCCCC
Confidence 99999995 58999999999 99999999999999998765 56777777899987654 46788 9999999999999
Q ss_pred eEEEeCeEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCcc
Q 006052 256 SFTIDGHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLC 326 (663)
Q Consensus 256 sf~v~g~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~ 326 (663)
||+|+|++| |||+|||||||||+|.| .|+.|||+||+|||||+||||||+++|++|+|||+||||+|.+
T Consensus 251 sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~R~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~~ 328 (692)
T 3sxx_A 251 SFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYND--HGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYM 328 (692)
T ss_dssp SCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTGGGCEECHHHHTCTTTT
T ss_pred cEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcC--CCcceeeeeeeehheeEEecCCCCchhhhheeeeccccCCCcc
Confidence 999999999 99999999999999999 6788999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCC--CeeEeeeeeceEEEEEEeEeecc
Q 006052 327 SMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIP--GKTVREVRQDVSLVVRTVSTFGN 404 (663)
Q Consensus 327 a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~--~~~~~~~r~~~~LVvr~i~TVgN 404 (663)
||+|++||||||+|+|||+++.+++|+|++++|||||||+| .|+||||++++++ .++++|+| +||||+|+||||
T Consensus 329 an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d-~Gil~kHt~~r~~~~~~~v~r~r---~LVvr~i~TVgN 404 (692)
T 3sxx_A 329 TNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEED-DGLLFKHSDFRDNFATSLVTRAT---KLVVSQIFTAAN 404 (692)
T ss_dssp BCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECGGGTTCSEEEEEEE---EEEEEEEEEETT
T ss_pred ccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeecc-CCceEEeeeccCCCceeeEEecc---EEEEEEeeeccc
Confidence 99999999999999999999999999999999999999999 5699999999877 55655555 999999999999
Q ss_pred cceeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCCCCc-cccccceeccCccccccceeEEeeeecCCCCCCCceEEEE
Q 006052 405 YDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHME-EDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSK 483 (663)
Q Consensus 405 YDYi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~-~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d 483 (663)
|||||+|+|||||+||++|||||||++++.. .++ +.+|||+|+++++|++|||+|||||||||||.+|||+++|
T Consensus 405 YDYif~w~F~qdG~Ie~ev~aTGil~t~~~~-----~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d 479 (692)
T 3sxx_A 405 YEYCLYWVFMQDGAIRLDIRLTGILNTYILG-----DDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACD 479 (692)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECCCCEECC-----TTCCCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEE
T ss_pred eeEEEEEEEecCCeEEEEEEEEEEEEeeeeC-----CCcccCCCcceecCCccccceeEEEEEEeccccCCCCceEEEEE
Confidence 9999999999999999999999999986542 122 4789999999999999999999999999999999999999
Q ss_pred EEEeecCC--CCCCCceeEEEEEeeecChhhhhhhcCC-CCcEEEEecCCCCCCC-CCcceEEEecCCccccCCCCCChh
Q 006052 484 LRTTRVND--RRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKM-GNLIGYRLIPEGVTGALLSSDDHP 559 (663)
Q Consensus 484 ~~~~~~~~--~~np~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~ivN~~~~n~~-G~p~gYrl~p~~~~~~~~~~~s~~ 559 (663)
+++++.+. +.||++++|++++++++||++|++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|++++|++
T Consensus 480 ~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~~s~~ 559 (692)
T 3sxx_A 480 AKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLV 559 (692)
T ss_dssp EEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCTTSHH
T ss_pred eEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCCCchh
Confidence 99998763 4799999999999999999999999999 9999999999999999 999999999999999999999999
Q ss_pred hhccccccceeEEeeeCCCccCCCCcCccCCCCC--CChhhhh-cCCCceecCCeEEEEEeCcccCCCCCCCCCccccee
Q 006052 560 QIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGD--DTLAVWS-NRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNG 636 (663)
Q Consensus 560 ~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~--~~l~~~~-~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~ 636 (663)
++||+||+|+||||||+|+|+||||.|+||+.++ .+|++|+ ++||+|+|||||+|+|||+||+||+|||||||++++
T Consensus 560 ~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~ 639 (692)
T 3sxx_A 560 AKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPI 639 (692)
T ss_dssp HHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEE
T ss_pred hhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCceEEEEecCcccCCchhcCCCCcceEE
Confidence 9999999999999999999999999999999887 6999999 899999999999999999999999999999999999
Q ss_pred eeEEEeCCCCCCCCCCCCCCCCCCC
Q 006052 637 GFELRPSNFFESNPVLKVKQPKEEY 661 (663)
Q Consensus 637 ~f~L~P~nFFd~nP~ld~p~~~~~~ 661 (663)
||+|||+|||++||+||+|++.+.+
T Consensus 640 gf~LrP~nFFd~NPaldvp~~~~~~ 664 (692)
T 3sxx_A 640 TLMLRPRHFFTENPGLDIQPSYAMT 664 (692)
T ss_dssp EEEEEEESSSSSCTTTTSCCSEEEC
T ss_pred EEEEECCCcCCCCCcccCCCccccc
Confidence 9999999999999999999987654
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=7.7e-179 Score=1499.43 Aligned_cols=605 Identities=27% Similarity=0.430 Sum_probs=561.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcC--C--CCCCCCEEEEEEEeCCeeEEEE
Q 006052 27 YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNE--T--TTNPPRQAFVIARIDHQTHELI 102 (663)
Q Consensus 27 ~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~--~--~~~p~R~A~vv~~~~~~~~E~~ 102 (663)
.|||||||++||++|++||+++... .++++|.+|+|.||+|++|++||+++ | .++|+|+|+|+++.+++++|++
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~~l~~~~~g~~~~~p~R~a~v~~~~~~~~~e~v 78 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKG--PERPHFIQIDRLDPPKKDMIRYLEAERTGKPLPHISRMTYVYYYIGLDFYKAL 78 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCS--SSCEEEEEEEECCCCHHHHHHHHHHHHHTCCCCCCCCEEEEEEEETTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccC--CCCcEEEEEECCCCCHHHHHHHHhhhhcCCCCCCCCcEEEEEEEeCCCEEEEE
Confidence 4999999999999999999987653 35799999999999999999998752 2 3567899999887788999999
Q ss_pred EeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCC-CCCCeEEccccccccCCccccCCCCceEEE
Q 006052 103 VDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIVK 181 (663)
Q Consensus 103 V~l~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~d~~~~g~~~~~~~~~~~~~R~~~ 181 (663)
|||+.++|++++.+++++||+++.||+.+||++|++||+|+++|+|||| +++.|+||||++|+.+ ++ ++|++|
T Consensus 79 Vdl~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~a~~~~gl~~~~~V~~dpw~~G~d~---~~---~~Rl~q 152 (633)
T 3loy_A 79 VNVSYGHIITNQKQPKGVIGPLIAEDIQEIEELATTHPIVKAEIEKLKLPPHVRVVCDPWMNGTDS---KE---DRMLIQ 152 (633)
T ss_dssp EETTTTEEEEEEECCTTCCCCCCHHHHHHHHHHHTTSHHHHHHHHTTCCCTTEEEEEEEEECCCSS---CC---CSCEEE
T ss_pred EECCCCeEEEEEecCCCccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCceEEEeccccccCC---CC---CcEEEE
Confidence 9999999999999998789999999999999999999999999999999 5689999999999622 23 789999
Q ss_pred EEEEEe---cCCCCCccCCcCCcEEEEecCccEEEEEECCce------e---ecCCCCCCcCccccCCCCCCCCCCCcee
Q 006052 182 VMCYYM---NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVT------V---PVPKADETEFRESKIKPPFRQSLKAITV 249 (663)
Q Consensus 182 ~~~f~~---~~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~------~---~~p~~~~~~y~~~~~~~~~r~~lkp~~i 249 (663)
|+||+| ++++|+|||||+ |+++||++++||++|++... . +.++.+..+|.++.+++ .|+++|||.|
T Consensus 153 ~~~y~r~~~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~g~~~~~~~~~p~~~~~~~~Y~p~~~~~-~r~d~kp~~i 230 (633)
T 3loy_A 153 CYMYLASAAHPESNHYSLPLK-FSPVFECLTKKFVRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGE-TIVPLKPLIV 230 (633)
T ss_dssp EEEEEEETTCTTCCGGGSBCS-EEEEEETTTCCEEEEEECCCSSSSCCCSCCCCCCCCCCCCSTTTSCC-CCCCCCCCEE
T ss_pred EEEEEecCCCCCccccccccc-eEEEEECCCCEEEEEEecCcCcccccccccCCCCCCCCCcChhHccc-ccCCCCCcce
Confidence 999999 368999999998 88999999999999997411 1 23445567999887644 8999999999
Q ss_pred eCCCCCeEEEeCeEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCC
Q 006052 250 VQPDGPSFTIDGHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGE 320 (663)
Q Consensus 250 ~QPeG~sf~v~g~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~ge 320 (663)
+||||+||+|+|++| |||+|||||||||+|. +|||+||+|||||+||||||+++|++|+|||+||
T Consensus 231 ~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~------gr~V~YrlSl~Em~VPYgdp~~p~~~k~afD~Ge 304 (633)
T 3loy_A 231 QQPEGPSFNVDGHKISWQGWEFFVIPTVREGFAIYDIHFK------GRSVVYRLSLSEMTVPYGDPRAPFHRKQAFDLGD 304 (633)
T ss_dssp ECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEET------TEEEEEEEEEEEEEEEBCCCSTTGGGCEEEHHHH
T ss_pred eCCCCCCEEEcCCccccCCcEEEEecCCCcCcEEEeeEEC------CEEEEEEEEeeeEEEeCCCCCChhhhheeecccc
Confidence 999999999999999 9999999999999983 3899999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeE
Q 006052 321 YGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVS 400 (663)
Q Consensus 321 yG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~ 400 (663)
||+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+| .|++|||++++++.++++|+| +||||+|+
T Consensus 305 yG~G~~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~d-~Gi~~kHt~~r~~~~~v~r~r---~LVvr~i~ 380 (633)
T 3loy_A 305 CGFGATGNSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQD-GGLLYKHTNYRTNVPVIARRR---EFVVQTIA 380 (633)
T ss_dssp TCTTTTBCCSTTTTCSCSSEEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEE
T ss_pred cCccccccCCccCCCCCCCcEEeeeEEecCCCCEEEecceEEEEecc-CCceeeeccccCCceeEEEee---EEEEEEEe
Confidence 99999999999999999999999999999999999999999999999 779999999999887776666 99999999
Q ss_pred eecccceeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceE
Q 006052 401 TFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFV 480 (663)
Q Consensus 401 TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~ 480 (663)
|||||||||+|+|||||+||++|||||||++++. +++++.+|||+|+++++|++|||+|||||||||||.+|||+
T Consensus 381 TVgNYdYif~w~F~~dG~Ie~ev~aTGil~t~~~-----~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~ 455 (633)
T 3loy_A 381 TVANAEYMLNIIFDQAGEIRIHVRATGILSTMPL-----DKDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVV 455 (633)
T ss_dssp EETTEEEEEEEEEETTSCEEEEEEEEECCCCEEC-----CTTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred eccceeEEEEEEEecCCeEEEEEEEEEEEeeeec-----CCcccCCCcceecCCccccceeEEEEEEecccccCCCCEEE
Confidence 9999999999999999999999999999998653 22345789999999999999999999999999999999999
Q ss_pred EEEEEEeecCCCCCCCceeEEEEEeeecChhhhhhhcCC-CCcEEEEecCCCCCCC-CCcceEEEecCCccccCCCCCCh
Q 006052 481 RSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKM-GNLIGYRLIPEGVTGALLSSDDH 558 (663)
Q Consensus 481 ~~d~~~~~~~~~~np~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~ivN~~~~n~~-G~p~gYrl~p~~~~~~~~~~~s~ 558 (663)
++|+++++.....||++++|+++++++++| |++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.++|+
T Consensus 456 ~~d~~~~~~~~~~nP~g~~~~~~~t~l~~e--a~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~ 533 (633)
T 3loy_A 456 FDDVIRMEKNTKLNPYNVGFVTERTVVEKP--GYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSY 533 (633)
T ss_dssp EEEEEECCSSSSSSTTSCCEEEEEEECCSS--EEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSH
T ss_pred EEeeeecCCCCCCCCCCcceEEEEEEeccc--cccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCch
Confidence 999999987655899999999999999876 6799999 9999999999999996 99999999999999999999999
Q ss_pred hhhccccccceeEEeeeCCCccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCcccceeee
Q 006052 559 PQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGF 638 (663)
Q Consensus 559 ~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f 638 (663)
.++||+||+|+||||||+|+|+||||.|+||+.++++|++|+++||+|+|||||+|+|||+||+||+|||||||++++||
T Consensus 534 ~~~Ra~fa~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~~e~i~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~~f 613 (633)
T 3loy_A 534 NNKRAQFATQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARRDENVRNDNPVVWATLGFTHIPRVEDFPVMPVEAHEI 613 (633)
T ss_dssp HHHHCGGGGSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTCCCCCTTBCEEEEEEEEEEECCCGGGCSSEEEEEEEE
T ss_pred hhhccchhhcceEEecCCCCccccCCCCccCCCCCCChHHHhcCCCccccCceEEEEecCcccCCCcccCCCCccceeeE
Confidence 99999999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCC
Q 006052 639 ELRPSNFFESNPVLKVKQPK 658 (663)
Q Consensus 639 ~L~P~nFFd~nP~ld~p~~~ 658 (663)
+|||+|||++||+||||+++
T Consensus 614 ~LrP~nFFd~nP~ldvp~s~ 633 (633)
T 3loy_A 614 ALVPFGFFDKNPALSVPQST 633 (633)
T ss_dssp EEEEESSSSSCGGGGSCCCC
T ss_pred EEEcCCcCCCCccccCCCCC
Confidence 99999999999999999985
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=1e-176 Score=1488.92 Aligned_cols=608 Identities=25% Similarity=0.438 Sum_probs=562.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEe--CCeeEEE
Q 006052 24 SHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHEL 101 (663)
Q Consensus 24 ~~~~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~--~~~~~E~ 101 (663)
....|||||||++||++|++||+++... .++++|.+|+|+||+|++ + .++|+|+|+|++++ +++++|+
T Consensus 4 ~~~~HPldpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~eP~K~~------g--~~~P~R~A~vv~~~~~~~~~~E~ 73 (646)
T 1w6g_A 4 IQTASPFRLASAGEISEVQGILRTAGLL--GPEKRIAYLGVLDPARGA------G--SEAEDRRFRVFIHDVSGARPQEV 73 (646)
T ss_dssp ---CCTTCCCCHHHHHHHHHHHHHTTCC--CTTEEEEEEEECCCCSCC------S--SSCCCCEEEEEEEETTSCCCEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcccC--CCCcEEEEEEccCCchhh------C--CCCCCeEEEEEEEECCCCcEEEE
Confidence 3457999999999999999999998763 258999999999999999 3 35789999999998 5689999
Q ss_pred EEeCCCCeEEE---EEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCCC-CCCeEEccccccccCCccccCCCCc
Q 006052 102 IVDLSLQEIAS---KRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLK-LEEVVCESFSVGWYGAEEEEGKNKK 177 (663)
Q Consensus 102 ~V~l~~~~v~~---~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~~-~~~v~~d~~~~g~~~~~~~~~~~~~ 177 (663)
+|+|+.++|++ ++.+++ +||+++.||+.+++++|+++|+|+++|+++||+ ++.++| +|++|||+.+.+. ++
T Consensus 74 vV~L~~~~v~~~~~~~~~~~-~~~~~~~~E~~~~e~~~~~~p~~~~~i~~~gl~~~~~v~~-pw~~g~~~~~~~~---~~ 148 (646)
T 1w6g_A 74 TVSVTNGTVISAVELDTAAT-GELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVA-PLSAGVFEYAEER---GR 148 (646)
T ss_dssp EEETTTTEEEEEEECCHHHH-CBCCCCHHHHHHHHHHHTTCHHHHHHHHHTTCCGGGEEEE-EEECCCCSCGGGT---TS
T ss_pred EEECCCCeEEecccceeCCC-ccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCeeEE-eecccccCCccCC---Cc
Confidence 99999999998 777774 699999999999999999999999999999994 677999 9999998765433 78
Q ss_pred eEEEEEEEEec-CCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCcCccccCCCCCCCCCCCceeeCCCCCe
Q 006052 178 RIVKVMCYYMN-GTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPS 256 (663)
Q Consensus 178 R~~~~~~f~~~-~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~s 256 (663)
|++|++||+|. +++|+|+|||+||+++||+++|||++|++.+.++.|. +..+|.++.+.++.|+++|||+|+||||+|
T Consensus 149 Rl~~~~~~~r~~~~~n~Ya~Pl~gl~~vvD~~~~~Vi~v~~~~~~~~p~-~~~~y~~~~~~~~~r~~lkP~~i~QPeGps 227 (646)
T 1w6g_A 149 RILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA-EHGNYTDPELTGPLRTTQKPISITQPEGPS 227 (646)
T ss_dssp CEEEEEEEECSSTTCCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCC-SCCCTTCHHHHCSCCCCCCCCCCCCTTCCS
T ss_pred EEEEEEEEEecCCCCCccccccCceEEEEECCCCEEEEEEeCCccCCCC-CCCccchhhcCCCcCCCCCCceecCCCCCc
Confidence 99999999985 5799999999999999999999999999987666665 456898766544679999999999999999
Q ss_pred EEEe-CeEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCcc
Q 006052 257 FTID-GHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLC 326 (663)
Q Consensus 257 f~v~-g~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~ 326 (663)
|+|+ |++| |||+|||||||||+|.| .|+.|||+||+|||||+||||||+++|++|+|||+||||+|.+
T Consensus 228 F~V~~G~~V~W~~W~F~vgfn~ReGlvL~dV~y~~--~g~~R~V~YrlSlsEm~VPYgdp~p~~~~k~afD~GeyG~G~~ 305 (646)
T 1w6g_A 228 FTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRD--GDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQY 305 (646)
T ss_dssp CEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCCTTTTTCEEECCCCCCGGGG
T ss_pred eEEeCCCEEEeCCCEEEEecCCCcceEEEEEEEcC--CCCceEEEEEeeeeEEEEeCCCCCchhhcceeeeccCcCCccc
Confidence 9999 9999 99999999999999998 5678999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccc
Q 006052 327 SMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYD 406 (663)
Q Consensus 327 a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYD 406 (663)
||+|++||||||+|+|||+++++++|+|++++|||||||+| .||||||+|++++.++++|+| +||||+|+||||||
T Consensus 306 an~L~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~d-~GilwkH~~~r~~~~~v~r~r---~LVvr~i~Tv~NYd 381 (646)
T 1w6g_A 306 ANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEED-WGILAKHSDLWSGINYTRRNR---RMVISFFTTIGNAD 381 (646)
T ss_dssp BCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEEEETTEE
T ss_pred ccccccCCCCCCCCEEEeEEEEcCCCCEEEcCCEEEEeecc-CCcceeeecccCCceeeeccc---EEEEEEEeeccccc
Confidence 99999999999999999999999999999999999999999 559999999999766555555 99999999999999
Q ss_pred eeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEE
Q 006052 407 YVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRT 486 (663)
Q Consensus 407 Yi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 486 (663)
|||+|+|||||+||++|+|||||++++... ++.+|||+|+++++|++|||+|||||||||||.+|||+++|+++
T Consensus 382 Yi~~w~F~~dG~Ie~ev~aTGil~t~~~~~------~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 455 (646)
T 1w6g_A 382 YGFYWYLYLDGTIEFEAKATGVVFTSAFPE------GGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVR 455 (646)
T ss_dssp EEEEEEEETTSCEEEEEEEEECCCCEECCT------TCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEEEEEEeeeecCC------ccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEe
Confidence 999999999999999999999999876421 24789999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCceeEEEEEeeecChhhhhhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccc
Q 006052 487 TRVNDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAF 565 (663)
Q Consensus 487 ~~~~~~~np~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~f 565 (663)
++.+ +.||++++|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||.|
T Consensus 456 ~~~~-~~np~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~f 534 (646)
T 1w6g_A 456 QTMG-PGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAF 534 (646)
T ss_dssp CCSB-TTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGG
T ss_pred ccCC-CCCCCCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCccccccccc
Confidence 8875 5899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred ccceeEEeeeCCCccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCcccceeeeEEEeCCC
Q 006052 566 TNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNF 645 (663)
Q Consensus 566 a~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nF 645 (663)
|+|+||||||+|+|+||+|.|+||+.++++|++|+++||+|+|+|||||+|||+||+||+|||||||+++.||+|||+||
T Consensus 535 a~~~lwVT~y~d~E~~aag~y~nQs~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~PvMP~~~~~f~L~P~nF 614 (646)
T 1w6g_A 535 ATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGF 614 (646)
T ss_dssp GGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEESSC
T ss_pred cccceEEeccCCCccccCCCCcccCCCCCChhHHhhCCCCcccCceEEEEeCccccCCCccccCCCCCceEEEEEEecCc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 006052 646 FESNPVLKVKQPKEE 660 (663)
Q Consensus 646 Fd~nP~ld~p~~~~~ 660 (663)
|++||+||+|+++++
T Consensus 615 F~~nP~ldvp~~~~~ 629 (646)
T 1w6g_A 615 FDRSPVLDVPANPSQ 629 (646)
T ss_dssp SSSCTTTTCCCC---
T ss_pred CCCCCCccCCCcccc
Confidence 999999999999875
No 5
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=8.9e-173 Score=1480.94 Aligned_cols=619 Identities=31% Similarity=0.566 Sum_probs=561.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeCCeeEEEE
Q 006052 23 PSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELI 102 (663)
Q Consensus 23 ~~~~~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~~~~~E~~ 102 (663)
.....|||||||++||++|++||+++... .++++|.+|+|+||+|++||+||..+++++|+|+|+|+++++++++|++
T Consensus 89 ~~~~~HPLdpLs~~Ei~~a~~il~~~~~~--~~~~~F~~i~L~eP~K~~vl~~~~~~~~~~p~R~A~vv~~~~~~~~e~v 166 (727)
T 1spu_A 89 VEKRPHPLNALTADEIKQAVEIVKASADF--KPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAV 166 (727)
T ss_dssp CCSSCCTTCCCCHHHHHHHHHHHHTSTTC--CTTCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEETTEEEEEE
T ss_pred ecccCCCCCcCCHHHHHHHHHHHHhcccC--CCCcEEEEEEecCCCHHHHHhHHhcCCCCCCCeEEEEEEEeCCeEEEEE
Confidence 34567999999999999999999987543 3578999999999999999999754323568999999999999999999
Q ss_pred EeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCC-CCCCeEEccccccccCCccccCCCCceEEE
Q 006052 103 VDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIVK 181 (663)
Q Consensus 103 V~l~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~d~~~~g~~~~~~~~~~~~~R~~~ 181 (663)
|+|+++++++++.+++ +||+++.||+.+++++|+++|.|+++|+++|+ ++.+|+||+|++|||+.+++. .+++|++|
T Consensus 167 V~l~~~~v~~~~~~~~-~~~~~~~~e~~~~e~~~~~~p~~~~~~~~~gl~~~~~v~~dpw~~g~~~~~~~~-~~~~R~~~ 244 (727)
T 1spu_A 167 VDLQNNKLLSWQPIKD-AHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGL-KQDARLLK 244 (727)
T ss_dssp EETTTTEEEEEEEETT-CCCCCCHHHHHHHHHHHHHCHHHHHHHHHTTCSCTTSEEEEEECCCCCTTTTCC-CSSSCEEE
T ss_pred EeCCCCceEEEEeCCC-cCCCCCHHHHHHHHHHHHhCHHHHHHHHHhCCCccceEEEccccccccCCCCCC-CCCcEEEE
Confidence 9999999999998884 69999999999999999999999999999999 789999999999998744321 13689999
Q ss_pred EEEEEecCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCcCccccCCCCCCCCCCCceeeCCCCCeEEEeC
Q 006052 182 VMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDG 261 (663)
Q Consensus 182 ~~~f~~~~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g 261 (663)
++||++.+++|+|+|||+||+++||+++|||++|++.+.++.|.. ..+|.++. +.|+++|||+|+||||+||+|+|
T Consensus 245 ~~~~~~~~~~n~Ya~Pl~g~~~vvD~~~~~V~~i~~~~~~~~p~~-~~~y~~~~---~~r~~lkP~~i~QPeG~sF~v~g 320 (727)
T 1spu_A 245 VISYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMT-ARPFDGRD---RVAPAVKPMQIIEPEGKNYTITG 320 (727)
T ss_dssp EEEEECCSSSCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCCS-CCCSSSTT---EECCCCCCCEEECTTCCSEEEET
T ss_pred EEEEEECCCCCccccCccceEEEEecccCEEEEEEcCCccccCCC-CCCccccc---cccCCCCCccccCCCCCCEEECC
Confidence 999997667999999999999999999999999998876666654 34687653 46999999999999999999999
Q ss_pred eEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCC
Q 006052 262 HMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEP 332 (663)
Q Consensus 262 ~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~ 332 (663)
++| |||+|||||||||+|.| .|+.|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++
T Consensus 321 ~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~r~V~YrlSl~Em~VPYgdp~~~~~~k~~fD~GeyG~G~~a~~L~l 398 (727)
T 1spu_A 321 DMIHWRNWDFHLSMNSRVGPMISTVTYND--NGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIAR 398 (727)
T ss_dssp TEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCT
T ss_pred CccccCCcEEEEecCCCCceEEEEEEEcC--CCceEEEEEEeEeeEEEEeCCCCCCchhcceeeeccCcCCccccccccc
Confidence 999 99999999999999998 5678999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEEEE
Q 006052 333 LRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWE 412 (663)
Q Consensus 333 G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~ 412 (663)
||||||+|+|||+++.+++|+|++++|||||||+| .||||||+|++.. ..++ ++++||||+|+|||||||||+|+
T Consensus 399 GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCi~E~d-~G~l~kH~~~~~~-~~~~---r~r~LVv~~i~Tv~NYdYi~~w~ 473 (727)
T 1spu_A 399 GKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERY-AGPEYKHQEMGQP-NVST---ERRELVVRWISTVGNYDYIFDWI 473 (727)
T ss_dssp TTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEECCTTSC-CEEE---EEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCEEeeeEEEcCCCCEEEeCCeEEEeccc-CCcceeeeccCCC-ceee---eceEEEEEEEEeecccceEEEEE
Confidence 99999999999999999999999999999999999 5699999999853 3433 44599999999999999999999
Q ss_pred EeeCccEEEEEeeeeeeeeeeeeeccCCCC---ccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeec
Q 006052 413 FKQSGSIKVTVGLTGMVQVRGTTYTHKDHM---EEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRV 489 (663)
Q Consensus 413 F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~---~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~ 489 (663)
|||||+||++|+|||||+++++.+....+. ++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.
T Consensus 474 F~~dG~I~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Nsv~~~d~~~~~~ 553 (727)
T 1spu_A 474 FHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPN 553 (727)
T ss_dssp EETTSCEEEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEC
T ss_pred EecCceEEEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCeEEEEeeEEccC
Confidence 999999999999999999876432211111 23689999999999999999999999999999999999999999887
Q ss_pred CCCCCCCceeEEEEEeeecChhhhhhhcCC-CCcEEEEecCCCCCCCCCcceEEEecC--Cc----cccCCCCCChhhhc
Q 006052 490 NDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPE--GV----TGALLSSDDHPQIR 562 (663)
Q Consensus 490 ~~~~np~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~ivN~~~~n~~G~p~gYrl~p~--~~----~~~~~~~~s~~~~r 562 (663)
+ +.||++++|++++++++||++|++++++ ++|+ |+|++++|++|+|+||||+|. .+ ++++++++|++++|
T Consensus 554 ~-~~np~~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~l~~~~s~~~~r 630 (727)
T 1spu_A 554 T-AGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHR 630 (727)
T ss_dssp C-SCSSCSEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSCSSCTTCHHHHH
T ss_pred C-CCCCCCceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCccccccccccCCcchhhhh
Confidence 5 4799999999999999999999999999 7777 999999999999999999993 33 56889999999999
Q ss_pred cccccceeEEeeeCCCccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCcccceeeeEEEe
Q 006052 563 AAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRP 642 (663)
Q Consensus 563 a~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P 642 (663)
|+||+|+||||||+|+|+||+|.|+||+++++||++|+++||+|+|+|||+|+|||+||+||+|||||||+++.||+|||
T Consensus 631 a~fa~~~lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P 710 (727)
T 1spu_A 631 LSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKP 710 (727)
T ss_dssp CGGGGCSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTTCCBCSSEEEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEE
T ss_pred hcccccceEEeccCCcccCCCCCCccCCCCCCCHHHHhhCCCccccCCcEEEEecccccCCChhhCCCCcccEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC
Q 006052 643 SNFFESNPVLKVKQPKE 659 (663)
Q Consensus 643 ~nFFd~nP~ld~p~~~~ 659 (663)
+|||++||+||+|++++
T Consensus 711 ~nFFd~nPaldvp~~~~ 727 (727)
T 1spu_A 711 WNFFDETPTLGALKKDK 727 (727)
T ss_dssp ESSSSSCTTSCCBC---
T ss_pred CCCCCCCCCcCCCCCCC
Confidence 99999999999999753
No 6
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=2.7e-156 Score=1337.22 Aligned_cols=602 Identities=23% Similarity=0.325 Sum_probs=500.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC---CC-----CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeC-
Q 006052 25 HQYHPLDSLTPSEFSQIRSIVTKAY---PE-----SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID- 95 (663)
Q Consensus 25 ~~~HPldpLt~~Ei~~a~~il~~~~---~~-----~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~- 95 (663)
...|||||||++||++|+++|+++. +. +..++ +|++|+|+||+|++||+||++++ ++|+|+|+|+++++
T Consensus 38 ~~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn-~i~~IeL~~P~K~~vL~~Ld~~~-~~P~R~A~vv~~~~~ 115 (746)
T 1tu5_A 38 DQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDN-CVFSVELQLPPKAAALAHLDRGS-PPPAREALAIVFFGG 115 (746)
T ss_dssp ---CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSE-EEEEEEEECCCHHHHHHHHHHCC-CCCCCEEEEEEEECS
T ss_pred CCCCcCCCCCHHHHHHHHHHHhccCccCccccccCCcccc-EEEEEECCCCCHHHhhhhhcCCC-CCCCccEEEEEEeCC
Confidence 5679999999999999999999875 21 12234 78899999999999999999884 78999999999986
Q ss_pred ---CeeEEEEEe-CCCCeEEEEEeeC--CCCCC----CCCHHHHHHHHHHhccChhHHHHHHHhCC-CCCC--eEEcccc
Q 006052 96 ---HQTHELIVD-LSLQEIASKRIYS--GYGYP----MFTFEDQENADKLAFTYPPFVASIRRRGL-KLEE--VVCESFS 162 (663)
Q Consensus 96 ---~~~~E~~V~-l~~~~v~~~~~~~--~~~~p----~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~--v~~d~~~ 162 (663)
+.++|++|+ |+.+++.+....+ ++.+| +++.+|+.+++++|+++|++++++.++|+ ++.+ ++|++|.
T Consensus 116 ~~~~~v~E~vV~PL~~~~~~~~~~~~~~~~~~p~~~r~i~~~E~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 195 (746)
T 1tu5_A 116 QPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMN 195 (746)
T ss_dssp SSSCEEEEEEEESSSSCCEEEECHHHHHSSCEEGGGSCCCHHHHHHHHHHHHHTTGGGGHHHHHHHHCTTTTCCCEEEEC
T ss_pred CCCCceEEEEecCCCCCcEEEEcccCCCCCcCCcccCCCCHHHHHHHHHHHHHCHHHHHHHHHhcCCCcccCCEEEeCcc
Confidence 357899999 9999864332112 34478 99999999999999999999999999666 3333 7788885
Q ss_pred ccccCCccccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEecC-----ccEEEEEECCce-e---------------
Q 006052 163 VGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT-V--------------- 221 (663)
Q Consensus 163 ~g~~~~~~~~~~~~~R~~~~~~f~~~~~~n~ya~Pl~gl~~~vD~~-----~~~vv~i~~~~~-~--------------- 221 (663)
.+..+ .. .++|++|++||.+...+|+|+||| ||+++||++ +|||++|++.+. +
T Consensus 196 ~~p~~---~~--~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~i~y~g~~~~s~~el~~~~~~g~~ 269 (746)
T 1tu5_A 196 SAPRG---VQ--SGDRSTWFGIYYNITKGGPYLHPV-GLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQV 269 (746)
T ss_dssp CSSCS---SS--TTCCEEEEEEEECCSSSCGGGSEE-EEEEEEECCSSSGGGCEEEEEEETTEEESSHHHHHHHHHTTCC
T ss_pred ccCCc---CC--CCcEEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCCccCchhhhhcccccCCc
Confidence 44221 11 268999999965433389999999 799999996 799999986541 1
Q ss_pred -ecCCCCCCcCcccc--CCCC-CCCCCCCceeeCCCCCeEEEeCeEE---------eeeccCceeEeecEEeecCCCcee
Q 006052 222 -PVPKADETEFRESK--IKPP-FRQSLKAITVVQPDGPSFTIDGHMI---------SFDVRAGMIISLASIYDLEKQQSR 288 (663)
Q Consensus 222 -~~p~~~~~~y~~~~--~~~~-~r~~lkp~~i~QPeG~sf~v~g~~v---------~f~~reGlvl~~v~~~D~r~~~~r 288 (663)
++|.. .+|.++. .+.. .|.++ ||+|+||||+||+|+|++| |||+|||||||||+|. +|
T Consensus 270 ~~~~~p--~~~~~~~~~~~~~~~r~~~-p~~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~------gr 340 (746)
T 1tu5_A 270 NVVVIP--DDGTGGFWSLKSQVPPGPT-PPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQ------GE 340 (746)
T ss_dssp CCCCCC--C-----------------------------CEEEETTEEEESSEEEEEEEETTTEEEEEEEEET------TE
T ss_pred ccccCc--cccCcccccccccccCCCC-CcceeCCCCCCEEecCCcccCCCcEEEEecCCCCceEEEeeEEC------Ce
Confidence 11111 1244333 2222 25555 9999999999999999999 9999999999999982 48
Q ss_pred eEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecC
Q 006052 289 RVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYA 368 (663)
Q Consensus 289 ~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~ 368 (663)
||+||+|||||+||||||+|.+.+|+|||.+ ||+|.+|++|++||||||+|+|||+++++++|+|++++|||||||+|.
T Consensus 341 ~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~~-yG~G~~a~~L~~GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCihE~d~ 419 (746)
T 1tu5_A 341 RLAYEISLQEAGAVYGGNTPAAMLTRYMDSG-FGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNK 419 (746)
T ss_dssp EEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-TCTTTTBCCCCBTTTBCTTSEEEEEEEEESSSSCEEEEEEEEEEEEEE
T ss_pred eEEEEEEeeeEEeecCCCCchhhcceeeccc-cCcccccccCccCCCCCCCCEEEeeEEecCCCCEEEcCCeEEEEEeeC
Confidence 9999999999999999999999999999986 999999999999999999999999999999999999999999999996
Q ss_pred CCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCCCCcccccc
Q 006052 369 GDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYG 448 (663)
Q Consensus 369 ~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yG 448 (663)
|.|||||+|.+..+ .+.+|++++||||+|+|||||||||+|+|||||+||++|+|||||++.. +.. ++.+||
T Consensus 420 G~~lwkH~~~~~~~--~~~v~r~r~LVvr~i~TVgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~--~~~----~~~~yG 491 (746)
T 1tu5_A 420 GLPLRRHHSDFLSH--YFGGVAQTVLVFRSVSTMLNADYVWDMVFYPNGAIEVKLHATGYISSAF--LFG----AARRYG 491 (746)
T ss_dssp EEEEEECCCSTTCC--CCCEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEE--CCT----TGGGGE
T ss_pred CeeeeeecccccCC--ceeeecccEEEEEEEEeecccceEEEEEEecCCcEEEEEEecceEeeee--cCC----CCCCCc
Confidence 55699999944322 2334555699999999999999999999999999999999999999754 221 237899
Q ss_pred ceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCCcee-----EEEEEeeecChhhhhhhcCC-CCc
Q 006052 449 TLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSY-----WTVDSKTAKTESDARIKLGS-EPA 522 (663)
Q Consensus 449 t~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~~-----~~~~~~~~~tE~~a~~~~~~-~~r 522 (663)
|+|+++++|++|||+|+|||||||||.+|||+++|+++++.+ ||++++ |++++++++||++|+++++. ++|
T Consensus 492 t~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~r 568 (746)
T 1tu5_A 492 NQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPR 568 (746)
T ss_dssp EEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCCS
T ss_pred ceecCCccccccceEEEEEecccccCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCce
Confidence 999999999999999999999999999999999999998864 888888 89999999999999999999 899
Q ss_pred EEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhccccccceeEEeeeCCCccCCCCcCccCCCCCC--Chhhhh
Q 006052 523 ELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD--TLAVWS 600 (663)
Q Consensus 523 ~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~--~l~~~~ 600 (663)
+| |+|++++|++|+|+||||+|+++++++++++|...+||+||+|+||||||+|+|+||||.|++|+++++ +|++|+
T Consensus 569 ~~-ivn~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~ 647 (746)
T 1tu5_A 569 YL-YLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI 647 (746)
T ss_dssp EE-EEEEEEECTTSCEEEEEEEEECBCCCCCCTTSTTGGGGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGGC
T ss_pred EE-EeCCCCcCCCCCcceEEECcCCcccccCCCcchhhccccccccceEEeccCCCcccCCccccccCCCCCCccHhhhc
Confidence 99 999999999999999999999999999999999999999999999999999999999999977777665 478999
Q ss_pred cCCCceecCCeEEEEEeCcccCCCCCCCCCc--ccceeeeEEEeCCCCCCCCCCCCCCC
Q 006052 601 NRNRSIENKDIVLWYTLGFHHVPYQEDFPVM--PTLNGGFELRPSNFFESNPVLKVKQP 657 (663)
Q Consensus 601 ~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ld~p~~ 657 (663)
+||+|+|+|||||+|||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 648 -~~e~I~n~DiV~W~t~G~~HiPr~ED~PvM~tp~~~~gf~LrP~nFF~~nP~ld~p~~ 705 (746)
T 1tu5_A 648 -NNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADS 705 (746)
T ss_dssp -SCCBCSSEEEEEEEEEEEEECCCGGGSSCBCCCSCCEEEEEEEESSSSSSCCCC----
T ss_pred -CCCCccCCceEEEEecccccCCChhccCccCCCccEEEEEEEeCCCCCCCCcccCCCc
Confidence 999999999999999999999999999999 77999999999999999999999998
No 7
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=6.2e-156 Score=1332.50 Aligned_cols=596 Identities=20% Similarity=0.305 Sum_probs=519.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCC------CCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeC--
Q 006052 24 SHQYHPLDSLTPSEFSQIRSIVTKAYPES------STHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID-- 95 (663)
Q Consensus 24 ~~~~HPldpLt~~Ei~~a~~il~~~~~~~------~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~-- 95 (663)
...+|||||||++||++|+++|+++..++ ..+| +|++|+|+||+|++||+||++++ ++|+|+|+|+++++
T Consensus 15 ~~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN-~i~~VeL~~P~K~~vL~~Ld~~g-~~P~R~A~vv~~~~~~ 92 (747)
T 1w7c_A 15 APKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSN-YVLWIETLKPNKTEALTYLDEDG-DLPPRNARTVVYFGEG 92 (747)
T ss_dssp CSSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSE-EEEEEEEECCCHHHHHHHHHSCC-CCCCCEEEEEEEECSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccc-eEEEEECcCCCHHHHHhHhhCCC-CCCCceEEEEEEeCCC
Confidence 35679999999999999999999883232 1233 89999999999999999999884 77899999999885
Q ss_pred --CeeEEEEEe-CCCCeEEEEEeeC---CC---CCC----CCCHHHHHHHHHHhccChhHHHHH------HHhC-CCCCC
Q 006052 96 --HQTHELIVD-LSLQEIASKRIYS---GY---GYP----MFTFEDQENADKLAFTYPPFVASI------RRRG-LKLEE 155 (663)
Q Consensus 96 --~~~~E~~V~-l~~~~v~~~~~~~---~~---~~p----~~~~ee~~~~e~~~~~~p~~~~a~------~~~g-~~~~~ 155 (663)
+.++|++|+ |+.+++++++.++ +. .+| +++.+|+.+++++|+ ++++++ +++| +...+
T Consensus 93 ~~~~~~E~vV~PL~~~~v~~~~~~~~~~~~g~~~~p~~~r~~~~~E~~~~e~~~~---~~~~~~~~~~l~~~~g~~~~~~ 169 (747)
T 1w7c_A 93 EEGYFEELKVGPLPVSDETTIEPLSFYNTNGKSKLPFEVGHLDRIKSAAKSSFLN---KNLNTTIMRDVLEGLIGVPYED 169 (747)
T ss_dssp SSCEEEEEEEESSSCCTTCEEEECCTTCTTCCSEEEGGGCCCCHHHHHHHHHHHH---HHHTSHHHHHHHHHHHSSCGGG
T ss_pred CCCceEEEEEcCCCCCcEEEEEeccccCCCCcccCCcccCCCCHHHHHHHHHHHH---HHHHHHhhccchhhcCCcccce
Confidence 467899999 9999988877763 33 358 899999999999999 666666 7788 75444
Q ss_pred eEEccccccccCCccccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEecC-----ccEEEEEECCce----------
Q 006052 156 VVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT---------- 220 (663)
Q Consensus 156 v~~d~~~~g~~~~~~~~~~~~~R~~~~~~f~~~~~~n~ya~Pl~gl~~~vD~~-----~~~vv~i~~~~~---------- 220 (663)
|++|+++ ...+....++|++|++||.+...+|+|+||| ||+++||++ +|||++|++.+.
T Consensus 170 --l~~w~~~---~~~~~~~~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~v~~~g~~~~s~~el~~ 243 (747)
T 1w7c_A 170 --MGCHSAA---PQLHDPATGATVDYGTCNINTENDAENLVPT-GFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYE 243 (747)
T ss_dssp --EEEEECS---SCEECTTTCCEEEEEEEEECCSSSCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHH
T ss_pred --eeeeccc---CCcCCCCCCceEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCcccCchhhhhh
Confidence 8888754 2211001268999999965433389999999 799999996 799999976631
Q ss_pred -------e---ecCCCCCCcC---ccccCC-C--CCCCCCCCceeeCCCCCeEEEeCeE--E---------eeeccCcee
Q 006052 221 -------V---PVPKADETEF---RESKIK-P--PFRQSLKAITVVQPDGPSFTIDGHM--I---------SFDVRAGMI 273 (663)
Q Consensus 221 -------~---~~p~~~~~~y---~~~~~~-~--~~r~~lkp~~i~QPeG~sf~v~g~~--v---------~f~~reGlv 273 (663)
+ +.| ..+| .++... + +.|+++|||.|+||||+||+|+|++ | |||+|||||
T Consensus 244 ~~~~~g~v~~~~~p---~~~~~~~~~~~~~~g~~~~r~~lkp~~i~QPeG~sF~v~g~~~yV~W~~W~f~vgf~~reGlv 320 (747)
T 1w7c_A 244 AMQKDDFVTLPKID---VDNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYFSWMDWGFYTSWSRDTGIS 320 (747)
T ss_dssp HHHSTTCCCCCCCC---TTCCGGGCCSCCTTSCCCTTTTSCCCCCCCTTCCCCEEETTTTEEEETTEEEEEEEETTTEEE
T ss_pred hhcccCcccccccC---CCCCcccchhhcccCCCCcccCCCCCcccCCCCCCEEEeCCccceeccCCeEEEecCCCCceE
Confidence 1 222 2232 222322 1 4589999999999999999999999 8 999999999
Q ss_pred EeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCC
Q 006052 274 ISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGM 353 (663)
Q Consensus 274 l~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~ 353 (663)
||||+|. +|||+||+|||||+||||||++.|++|+|||+| ||+|. |++|++||||||+|+|||++++ ++|+
T Consensus 321 L~dv~y~------gr~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~g-yG~G~-a~~L~~GcDCpg~i~Y~D~~~~-~~G~ 391 (747)
T 1w7c_A 321 FYDITFK------GERIVYELSLQELIAEYGSDDPFNQHTFYSDIS-YGVGN-RFSLVPGYDCPSTAGYFTTDTF-EYDE 391 (747)
T ss_dssp EEEEEET------TEEEEEEEEEEEEEEEECCSSTTGGGCEEEHHH-HCSSS-SCCCCBTTTBCTTCEEEEEEEE-ETTE
T ss_pred EEeeeEC------CEEEEEEEEeeeEEeccCCCCchhheeeeeccc-cCccc-ccccccCCCCCCCCEEeeeEEe-cCCC
Confidence 9999982 489999999999999999999999999999999 99999 9999999999999999999999 9999
Q ss_pred eEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEEEEEeeCccEEEEEeeeeeeeeee
Q 006052 354 PRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRG 433 (663)
Q Consensus 354 p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~~ 433 (663)
|++++|||||||+|.|.|||||+++ +.+ .+|++++||||+|+|||||||||+|+|||||+||++|+|||||++..
T Consensus 392 p~~~~naiCihE~d~G~pl~kH~~~--~~~---~v~r~r~LVvr~i~TVgNYdYif~w~F~qdG~Ie~ev~aTGil~t~~ 466 (747)
T 1w7c_A 392 FYNRTLSYCVFENQEDYSLLRHTGA--SYS---AITQNPTLNVRFISTIGNADYNFLYKFFLDGTLEVSVRAAGYIQAGY 466 (747)
T ss_dssp EEEEEEEEEEEEEECSSCSEEEEET--TEE---EEECCEEEEEEEEECCCC-CEEEEEEECTTSCEEEEEEECBCCCCEE
T ss_pred eEEcCceEEEEEEeCCeeeEEeccC--Ccc---eeeeCceEEEEEEEeccccceEEEEEEecCCeEEEEEEeeEEEeccc
Confidence 9999999999999966679999998 333 45556699999999999999999999999999999999999999754
Q ss_pred eeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCCce-----eEEEEEeeec
Q 006052 434 TTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKS-----YWTVDSKTAK 508 (663)
Q Consensus 434 ~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~-----~~~~~~~~~~ 508 (663)
+.. +++.+|||+|+++++|++|||+|||||||||||.+|||+++|+++++.+ ||+++ +|++++++++
T Consensus 467 --~~~---~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~ 538 (747)
T 1w7c_A 467 --WNP---ETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVE---YPWAPGTVYNTKQIAREVFE 538 (747)
T ss_dssp --CCT---TTCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---CTTSTTCEEEEEEEEEEECC
T ss_pred --cCC---CCcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEcc
Confidence 322 2347899999999999999999999999999999999999999998875 67777 8999999999
Q ss_pred ChhhhhhhcC-C-CCcEEEEecCCCCCCCCCcceEEEecCCc-cccCCCCCChhhhccccccceeEEeeeCCCccCCCCc
Q 006052 509 TESDARIKLG-S-EPAELLFVNPNKKTKMGNLIGYRLIPEGV-TGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGL 585 (663)
Q Consensus 509 tE~~a~~~~~-~-~~r~~~ivN~~~~n~~G~p~gYrl~p~~~-~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~ 585 (663)
||++|+++++ . ++|+| |+|++++|++|+|+||||+|+++ ++++++++|...+||+||+|+||||||+|+|+||||.
T Consensus 539 tE~~a~~~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ 617 (747)
T 1w7c_A 539 NEDFNGINWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLFLTKHKDTELRSSTA 617 (747)
T ss_dssp BCCTTCBCCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSSSCGGGGSSEEEEECCTTCCCSCCT
T ss_pred chhhhhhcCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhhcchhccCcEEEecCCCCccCCCCC
Confidence 9999999999 5 69999 99999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CccCCCCCC--ChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCc--ccceeeeEEEeCCCCCCCCCCCCCCC
Q 006052 586 YADQSHGDD--TLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVM--PTLNGGFELRPSNFFESNPVLKVKQP 657 (663)
Q Consensus 586 y~~q~~~~~--~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ld~p~~ 657 (663)
|++|+.+++ +|++|+ +||+|+|+|||||+|||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 618 ynq~~~~~~~~~~~~~~-~~e~I~n~DiVlW~t~G~~HiPr~ED~PvM~tP~~~~gf~LrP~nFF~~nP~ldvp~~ 692 (747)
T 1w7c_A 618 LNTNALYDPPVNFNAFL-DDESLDGEDIVAWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYFDSENSRDTTQQ 692 (747)
T ss_dssp TCTTCSSSCSCCGGGGC-SCCBCTTEEEEEEEEEEEEECCCGGGSSCBCSSSSEEEEEEEEESSSSSCTTTTCSSE
T ss_pred ccccCCCCCCcchhhhh-CCCccccCceEEEEecccccCCChhhcCCcCCCcceEEEEEEeCCcCCCCCCccCCCc
Confidence 976666665 489999 999999999999999999999999999999 77999999999999999999999987
No 8
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=4e-148 Score=1263.97 Aligned_cols=604 Identities=25% Similarity=0.357 Sum_probs=504.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC--C------CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeCCe-
Q 006052 27 YHPLDSLTPSEFSQIRSIVTKAYP--E------SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQ- 97 (663)
Q Consensus 27 ~HPldpLt~~Ei~~a~~il~~~~~--~------~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~~~- 97 (663)
.-+|++||++|+++++++|.++.. + +..+| ++.+|||+.|+|++||+|||+++ ++|+|+|+|+|++|++
T Consensus 10 ~~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~~-~~P~R~A~vvi~fG~~~ 87 (731)
T 3hi7_A 10 AGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKN-TVFLIEMLLPKKYHVLRFLDKGE-RHPVREARAVIFFGDQE 87 (731)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSE-EEEEEEEECCCHHHHHHHHHHCC-CCCCCEEEEEEEECSSS
T ss_pred CCccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEecCCCchhhhhhhcCCC-CCCCcceEEEEEcCCCC
Confidence 356999999999999999998641 1 34567 89999999999999999999984 8899999999999763
Q ss_pred ---eEEEEEe-CCCCeEEEEEeeCCCCC------CCCCHHHHHHHHHHhcc-----ChhHHHHHHHhCC--CCCCeEEcc
Q 006052 98 ---THELIVD-LSLQEIASKRIYSGYGY------PMFTFEDQENADKLAFT-----YPPFVASIRRRGL--KLEEVVCES 160 (663)
Q Consensus 98 ---~~E~~V~-l~~~~v~~~~~~~~~~~------p~~~~ee~~~~e~~~~~-----~p~~~~a~~~~g~--~~~~v~~d~ 160 (663)
+.|++|+ |+.++.++... ++.+. .+++.-|+.++.+++.+ ...+++ ..|. +.+.-.|+.
T Consensus 88 ~P~v~Ey~VGPLP~p~~~~~l~-~~~~~~~p~~~R~~~~~e~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~cL~ 163 (731)
T 3hi7_A 88 HPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLN---TTGFSFQDCHDRCLA 163 (731)
T ss_dssp SCEEEEEEEECSSSCCEEEEES-CCTTCCCHHHHSCCCHHHHHHHHHHHHHHTGGGHHHHHH---HHSCBSSSCSSSBEE
T ss_pred CCeeEEEEEcCCCCCCeeeecc-cCCCCcCCcccCCCcHHHHHHHHHHHHHHHhHHHHHHHH---HhCceecCCCCCEEe
Confidence 6799995 88777655444 33322 34655567777666443 233333 3454 333445665
Q ss_pred ccccccCCccccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEec-----CccEEEEEECCce---------------
Q 006052 161 FSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDL-----DEMKIIGFQDRVT--------------- 220 (663)
Q Consensus 161 ~~~g~~~~~~~~~~~~~R~~~~~~f~~~~~~n~ya~Pl~gl~~~vD~-----~~~~vv~i~~~~~--------------- 220 (663)
+... .|... ..++|.. |+.|+|.. ...|.||+ ||.++||+ +.|+|.+|.+++.
T Consensus 164 ~~~~---~P~~~-~sg~r~~-W~~~~~~~-~g~~l~P~-gl~~~vDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~g 236 (731)
T 3hi7_A 164 FTDV---APRGV-ASGQRRS-WLIIQRYV-EGYFLHPT-GLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADG 236 (731)
T ss_dssp EEEC---SSCSS-STTCCEE-EEEEEECS-TTGGGCEE-EEEEEEECCSSSGGGCEEEEEEETTEECSSHHHHHHHHHTT
T ss_pred eecC---CCCcc-CCCCEEE-ehheeccC-CCceeecc-ceEEEEecCCCChHHcEEEEEEECCEecCCHHHHHHHHhCC
Confidence 5322 23211 1244544 45566643 24799999 89999999 4899999975432
Q ss_pred ----e--ecCCCCC---------CcCccccCCC--CCCCCCCCceeeCCCCCeEEEeCeEE---------eeeccCceeE
Q 006052 221 ----V--PVPKADE---------TEFRESKIKP--PFRQSLKAITVVQPDGPSFTIDGHMI---------SFDVRAGMII 274 (663)
Q Consensus 221 ----~--~~p~~~~---------~~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~g~~v---------~f~~reGlvl 274 (663)
+ +.|..++ ..|..-..++ +.++++|||+|+||||+||+|+|++| |||+||||||
T Consensus 237 ~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~~kp~~i~QPeG~sF~V~g~~V~W~~W~F~vgfn~reGlvL 316 (731)
T 3hi7_A 237 EVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQV 316 (731)
T ss_dssp CCCCCCCCCCC----------CCCCTTSCCCCSCCSBCCCSCCCEEECTTCCSSEEETTEEEEBTEEEEEEEETTTEEEE
T ss_pred CeeEeccCCCCCcccccccccccccccccccCCCCCCCCCCCCcceeCCCCCCEEEeCCEEEecCcEEEEecCCCCCcEE
Confidence 1 1111111 0132112222 34789999999999999999999999 9999999999
Q ss_pred eecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCe
Q 006052 275 SLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMP 354 (663)
Q Consensus 275 ~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p 354 (663)
|||+|.| |||+||+|||||+||||||+++|++|+|||+| ||+|.+||+|++||||||+|+|||+++.+++|+|
T Consensus 317 ~dV~y~g------r~v~YrlSlsEm~VpYgdp~p~~~~k~~fD~G-yG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p 389 (731)
T 3hi7_A 317 LNVHFGG------ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDP 389 (731)
T ss_dssp EEEEETT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-GTGGGCCCCCCBTTTBCTTSEEEEEEEEESCSSC
T ss_pred EeEEECC------eeEEEEeeeeeeEEccCCCCCccccceeeecC-cCccccccccccCCCCCCCCEEEeeEEecCCCCE
Confidence 9999843 89999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccceEEEEecCCCceeeccc--cCCCCeeEeeeeeceEEEEEEeEeecccceeEEEEEeeCccEEEEEeeeeeeeee
Q 006052 355 RKIPKAFCIFERYAGDIMWRHTE--ATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVR 432 (663)
Q Consensus 355 ~~~~naiCi~E~d~~g~l~rH~~--~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~ 432 (663)
++++|||||||+|.|.++|||++ ++++ ..++.++++++||||+|+|||||||||+|+|||||+||+||||||||++.
T Consensus 390 ~~~~naICihE~d~Gi~~~kHtd~~~r~~-~~~~~~~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGilst~ 468 (731)
T 3hi7_A 390 VHYPRALCLFEMPTGVPLRRHFNSNFKGG-FNFYAGLKGQVLVLRTTSTVYNADYIWDFIFYPNGVMEAKMHATGYVHAT 468 (731)
T ss_dssp EEEEEEEEEEEEECSSCSEEEEEECSSSS-EEEEEEECCEEEEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEECCCEE
T ss_pred EecCCEEEEEEeeCCeeEEEecccccCCc-cceeecccccEEEEEEeeecccccEEEEEEEecCCeEEEEEEEEEEEeec
Confidence 99999999999997767999975 4543 23455777889999999999999999999999999999999999999975
Q ss_pred eeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecCCCCCCCc--eeEEEEEeeecCh
Q 006052 433 GTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRK--SYWTVDSKTAKTE 510 (663)
Q Consensus 433 ~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~--~~~~~~~~~~~tE 510 (663)
.. .. ++.+|||+|+++++|++|||+|||||||||||.+|||+++|+++++.+.|++|.. +++++++++++||
T Consensus 469 ~~--~~----~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~nP~~~~~~~~~~~~~~t~l~tE 542 (731)
T 3hi7_A 469 FY--TP----EGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWE 542 (731)
T ss_dssp EC--CG----GGGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTCTTSEEEEEEEEEEEECBG
T ss_pred cc--CC----CCCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceecCCCCCCCCCccceeEEEEEEEccch
Confidence 43 21 2368999999999999999999999999999999999999999998877888865 6689999999999
Q ss_pred hhhhhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhccccccceeEEeeeCCCccCCCCcCccC
Q 006052 511 SDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQ 589 (663)
Q Consensus 511 ~~a~~~~~~-~~r~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q 589 (663)
++|++++++ ++|+|+|+|+ ++|++|+|+||||+|++++.+++.++|...+||+||+|+||||||+|+|+||||.|++|
T Consensus 543 ~ea~~~~~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~fa~~~lwVT~y~d~E~~aag~y~~~ 621 (731)
T 3hi7_A 543 RQAAFRFKRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQN 621 (731)
T ss_dssp GGGCBCTTSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGGGGGCSEEEEECCGGGSCSCCTTTTT
T ss_pred hhhhhccCCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhchhcccceEEecCCCCccCCCcccccc
Confidence 999999999 9999999999 88999999999999998777777799999999999999999999999999999999999
Q ss_pred CCCCC--ChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCc--ccceeeeEEEeCCCCCCCCCCCCCCCC
Q 006052 590 SHGDD--TLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVM--PTLNGGFELRPSNFFESNPVLKVKQPK 658 (663)
Q Consensus 590 ~~~~~--~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ld~p~~~ 658 (663)
+++++ +|++|+++||+|+|||||+|+|||+||+||+|||||| |++++||+|||+|||++||+||+|++.
T Consensus 622 s~~~~~~gl~~w~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMptp~e~~~f~LrP~nFFd~nPalds~~~v 694 (731)
T 3hi7_A 622 DPWDPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTV 694 (731)
T ss_dssp CSSSCSCCTTHHHHTCCBCSSEEEEEEEEEEEEECCCGGGSSCBCSTTCEEEEEEEEESSSSSCGGGGCTTCE
T ss_pred CCCCCCCCHHHHhhCCCceecCceEEEEecccccCCChhhcCccccccceeEEEEEccCCCCCCccccCcceE
Confidence 88774 7999999999999999999999999999999999999 558999999999999999999999864
No 9
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=4.9e-146 Score=1247.84 Aligned_cols=604 Identities=21% Similarity=0.331 Sum_probs=491.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCC--------CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEeC
Q 006052 24 SHQYHPLDSLTPSEFSQIRSIVTKAYPE--------SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID 95 (663)
Q Consensus 24 ~~~~HPldpLt~~Ei~~a~~il~~~~~~--------~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~~ 95 (663)
++...+|++||++|+++++++|.++..+ +..+| ++.+|||+.|+|++||+|||+++ ++|+|+|+|+|++|
T Consensus 62 ap~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~~-~~P~R~A~vvi~fG 139 (797)
T 3pgb_A 62 APKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDN-TIALIELHRPNKSEAIPYLDGSG-PAPTRHAHVRLNNR 139 (797)
T ss_dssp CSSCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSE-EEEEEEEECCCHHHHHHHHHC----CCCCEEEEEEEEC
T ss_pred CCCCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEeeCCCHHHHHHhhcCCC-CCCCeeEEEEEEcC
Confidence 4567999999999999999999987522 34567 89999999999999999999984 78999999999996
Q ss_pred C----eeEEEEEe-CCCC--eEEEEEeeC--CC--C-----CCCCCHHHHHHHHHHhccChhH-HHHHHHhCCCCCCeEE
Q 006052 96 H----QTHELIVD-LSLQ--EIASKRIYS--GY--G-----YPMFTFEDQENADKLAFTYPPF-VASIRRRGLKLEEVVC 158 (663)
Q Consensus 96 ~----~~~E~~V~-l~~~--~v~~~~~~~--~~--~-----~p~~~~ee~~~~e~~~~~~p~~-~~a~~~~g~~~~~v~~ 158 (663)
+ .+.|++|+ |+.+ +.++...++ ++ + ..+++..|+..+.++++.--.. ++.+...+.+..+ .|
T Consensus 140 ~~~~P~v~Ey~VGPLP~p~~t~~~~l~~~y~~~~~g~~~~~~r~~~~~e~~~l~~~~~~~~~~~~~l~~~t~~~~~~-~~ 218 (797)
T 3pgb_A 140 ATTDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLEN-DT 218 (797)
T ss_dssp SSSSCEEEEEEEESSSCSTTCEEEECCTTCSSCSTTEEECSCCCTTHHHHTTHHHHHHHTHHHHHHHHSCCCSSSTT-CC
T ss_pred CCCCCceEEEEEcCCCCCCcceeEEccccccCCCCCCCCcccCcchhhHHHHHHHHHHHHHHHHHHHhhcccccCCC-Ce
Confidence 5 46799995 7766 565544331 11 2 1234455666666665443322 2222111111111 22
Q ss_pred ccccccccCCccccCCCCceEEEEEEEEecC---CCCCccCCcCCcEEEEecC-----ccEEEEEECCce-ee-------
Q 006052 159 ESFSVGWYGAEEEEGKNKKRIVKVMCYYMNG---TVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT-VP------- 222 (663)
Q Consensus 159 d~~~~g~~~~~~~~~~~~~R~~~~~~f~~~~---~~n~ya~Pl~gl~~~vD~~-----~~~vv~i~~~~~-~~------- 222 (663)
+.+. ...|... ..|+| ..|++|+|.. .+++|.||+ ||.++||+. .|+|.+|.+++. +.
T Consensus 219 L~~~---~~~P~g~-~sg~r-~~W~~~~~~~~g~~d~~~lhP~-gl~~lvDh~~~Dps~W~v~~v~Yng~~y~s~eel~~ 292 (797)
T 3pgb_A 219 LDIW---GIDPLWQ-DDGRI-IRWDMFWNMADDEFDSETLLPL-GLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFRK 292 (797)
T ss_dssp EEEE---ECSSCBC-STTCC-EEEEEEEECCCTTCCCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHH
T ss_pred Eeee---ccCCCCc-CCCCE-EEeeeeeccCCCccccceeecc-ceEEEEecCCCChhHcEEEEEEECCEecCCHHHHHH
Confidence 2221 1122211 12434 4677788742 267999999 899999995 899999976543 11
Q ss_pred ---------cCCCCCCcCccccCCC--CCCCCCCCceeeCCCCCeEEEe--CeEE---------eeeccCceeEeecEEe
Q 006052 223 ---------VPKADETEFRESKIKP--PFRQSLKAITVVQPDGPSFTID--GHMI---------SFDVRAGMIISLASIY 280 (663)
Q Consensus 223 ---------~p~~~~~~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~--g~~v---------~f~~reGlvl~~v~~~ 280 (663)
+++.....|.....++ +.|+++|||+|+||||+||+|+ |+.| |||+|||||||||+|.
T Consensus 293 ~y~~g~~~~~~~~~~g~ws~~~~~g~~~~~~~lkP~~i~QPeGpsF~V~g~g~~V~W~~W~F~vgfn~ReGlvL~dV~y~ 372 (797)
T 3pgb_A 293 AYWSPGFVKLKPNVDGAWAHTEQRGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIKYK 372 (797)
T ss_dssp HHTSTTCCCCCCCCCCGGGCCSCCSCCCTTTTSCCCCCCCTTCCCSEEETTTTEEEETTEEEEEEEETTTEEEEEEEEET
T ss_pred HHhCCCeeecCCCCCCcccccccCCCCCCcCCCCCceeeCCCCCCEEEecCCCEEEeCCcEEEEecCCCCceEEEccccC
Confidence 1111122443212222 3488999999999999999998 6778 9999999999999973
Q ss_pred ecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccc
Q 006052 281 DLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKA 360 (663)
Q Consensus 281 D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~na 360 (663)
+|||+||+|||||+||||||+|.+.+++|||. |||+|.+||+|++||||||+|+|||+++.++ |+|++++||
T Consensus 373 ------gr~V~YrlSlsEm~VPYg~~~P~~~~~af~D~-eyG~G~~an~L~lGcDCpg~i~YlD~~~~~~-~~p~~~~Na 444 (797)
T 3pgb_A 373 ------GQRVLYELGLQEALAHYAANDPVQSSVAYLDS-YYGFGPYAFELLKGYDCPSYASYLNTSFYKD-EETHTHVDS 444 (797)
T ss_dssp ------TEEEEEEEEEEEEEEEECCSSHHHHHCEEEGG-GTCSGGGCCCCCBTTTBCTTCEEEEEEEEET-TEEEEEEEE
T ss_pred ------CeeEEEEeEeeeeEEeCCCCChhhhcceeeec-ccCCccccccCccCCCCCCCCEEeeeEEecC-CCceEeccE
Confidence 48999999999999999999877666666665 8999999999999999999999999999987 678999999
Q ss_pred eEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCC
Q 006052 361 FCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKD 440 (663)
Q Consensus 361 iCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~ 440 (663)
|||||+|.|.|||||++. +.+ .+|++++||||+|+|||||||||+|+|||||+||+||||||||++. .+. +
T Consensus 445 ICihE~D~G~~lwKHt~~--~~~---~v~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGiLst~--~~~--~ 515 (797)
T 3pgb_A 445 LCLFEFDADYPMARHSTS--EFV---SVTKNVYFTLRSVSTIGNADYMFSYNFHMDGTIGVEVRASGYIQSA--YYA--N 515 (797)
T ss_dssp EEEEEEECSSCSEEEECS--SEE---EEECCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCE--ECT--T
T ss_pred EEEEEeeCCceeEEeccC--Ccc---eEEeccEEEEEEEeeeccccEEEEEEEecCCeEEEEEEEEEEEEec--ccC--C
Confidence 999999977789999995 333 4555669999999999999999999999999999999999999975 221 1
Q ss_pred CCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecCCCCCC--CceeEEEEEeeecChhhhhhhcC
Q 006052 441 HMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSS--RKSYWTVDSKTAKTESDARIKLG 518 (663)
Q Consensus 441 ~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np--~~~~~~~~~~~~~tE~~a~~~~~ 518 (663)
+.+|||+|+++++|++|||+|||||||||||.+|||+++|+++++.+.||+| ++++|++++++++||++|+++++
T Consensus 516 ---~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~~~ 592 (797)
T 3pgb_A 516 ---NQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIHSEDEARLNWG 592 (797)
T ss_dssp ---CGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTTTTCEEEEEEEEEEECCBGGGCEECCC
T ss_pred ---CCCccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEccCCCCCCCCcccceeEEEEEEccchhhhhhhcC
Confidence 4789999999999999999999999999999999999999999988777665 58999999999999999999999
Q ss_pred C-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCC-CCChhhhccccccceeEEeeeCCCccCCCCcCccCCCCCC--
Q 006052 519 S-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLS-SDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD-- 594 (663)
Q Consensus 519 ~-~~r~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~-~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~-- 594 (663)
+ ++|+|+|+|++++|++|+|+||||+|++++.+|+. +++..++||+||+|+||||||+|+|+||||.|++|+++++
T Consensus 593 ~~~~r~~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~~v 672 (797)
T 3pgb_A 593 FNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPV 672 (797)
T ss_dssp GGGCEEEEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTGGGGCSEEEEECCTTCCCSCCTTGGGCTTSCSC
T ss_pred CCCCceEEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhchhhhCceEEecCCCCccCCCCCCcccCCCCCcc
Confidence 9 99999999999999999999999999977766664 4556889999999999999999999999999999999876
Q ss_pred ChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCC--cccceeeeEEEeCCCCCCCCCCCCCCC
Q 006052 595 TLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPV--MPTLNGGFELRPSNFFESNPVLKVKQP 657 (663)
Q Consensus 595 ~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pv--mp~~~~~f~L~P~nFFd~nP~ld~p~~ 657 (663)
++.+|+ +||+|+|||||+|+|||+||+||+||||| ||++++||+|||+|||++||+||+|++
T Consensus 673 ~~~~~~-~nesI~neDiVlW~t~G~~HiPr~ED~Pvt~MP~e~~gf~LrP~nFFd~NPald~~~~ 736 (797)
T 3pgb_A 673 DFSTFF-NGESLNQTDLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNM 736 (797)
T ss_dssp CGGGGC-SCCBCSSEEEEEEEEEEEEECCCGGGSSCBCTTTSEEEEEEEEESCSSSCGGGGCSCE
T ss_pred chhhhc-CCCccccCceEEEEecccccCCChhhCCCccCCcceeEEEEEcCCCCCCCccccCccc
Confidence 456777 99999999999999999999999999999 999999999999999999999999974
No 10
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=19.38 E-value=64 Score=25.25 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=17.4
Q ss_pred CCCCCCCHHHHHHHHHHHHh
Q 006052 28 HPLDSLTPSEFSQIRSIVTK 47 (663)
Q Consensus 28 HPldpLt~~Ei~~a~~il~~ 47 (663)
-|+..||.+||++.+++|+.
T Consensus 58 p~~~~Ls~~ei~~l~~yl~~ 77 (79)
T 2d0s_A 58 PPHPQVAEADIEKIVRWVLT 77 (79)
T ss_dssp CCCTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHh
Confidence 45679999999999999975
Done!