Query 006055
Match_columns 663
No_of_seqs 717 out of 5221
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 17:42:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006055.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006055hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.5E-60 3.3E-65 569.8 38.9 275 365-652 683-962 (968)
2 KOG1187 Serine/threonine prote 100.0 3.4E-54 7.4E-59 450.2 27.1 281 361-644 61-355 (361)
3 KOG0192 Tyrosine kinase specif 100.0 2.6E-46 5.6E-51 387.8 25.8 260 364-645 37-307 (362)
4 KOG0581 Mitogen-activated prot 100.0 4.3E-46 9.4E-51 367.1 19.5 253 365-638 76-336 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-45 8.9E-50 376.8 20.2 256 365-644 203-464 (468)
6 KOG0591 NIMA (never in mitosis 100.0 1.3E-44 2.7E-49 341.5 12.8 249 374-639 23-283 (375)
7 KOG0575 Polo-like serine/threo 100.0 3E-43 6.5E-48 366.3 20.9 239 375-638 23-270 (592)
8 KOG0615 Serine/threonine prote 100.0 8.2E-44 1.8E-48 352.9 14.2 243 375-637 177-437 (475)
9 KOG0595 Serine/threonine-prote 100.0 6.7E-42 1.5E-46 340.0 19.7 189 376-571 16-217 (429)
10 KOG1026 Nerve growth factor re 100.0 1.4E-42 3E-47 374.9 16.1 251 375-644 491-765 (774)
11 KOG0593 Predicted protein kina 100.0 6.1E-42 1.3E-46 326.5 14.7 254 376-637 8-284 (396)
12 KOG0598 Ribosomal protein S6 k 100.0 1.7E-41 3.7E-46 334.6 16.4 231 375-629 30-269 (357)
13 KOG0661 MAPK related serine/th 100.0 1.7E-41 3.7E-46 342.1 10.3 256 373-638 13-292 (538)
14 KOG0578 p21-activated serine/t 100.0 6.9E-41 1.5E-45 346.0 14.2 240 375-637 278-523 (550)
15 PHA02988 hypothetical protein; 100.0 9.2E-40 2E-44 335.4 22.2 257 363-643 13-281 (283)
16 KOG0198 MEKK and related serin 100.0 1.9E-40 4.2E-45 333.5 16.4 247 375-642 22-281 (313)
17 KOG0582 Ste20-like serine/thre 100.0 1E-39 2.2E-44 326.8 21.1 251 375-638 31-294 (516)
18 KOG0600 Cdc2-related protein k 100.0 3.5E-40 7.6E-45 334.9 17.9 248 375-636 122-399 (560)
19 KOG0592 3-phosphoinositide-dep 100.0 2E-40 4.4E-45 339.3 16.3 239 375-638 78-339 (604)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.7E-39 3.8E-44 342.4 20.9 252 375-644 12-337 (338)
21 KOG0193 Serine/threonine prote 100.0 1.1E-39 2.3E-44 337.9 17.8 250 374-645 396-657 (678)
22 KOG0659 Cdk activating kinase 100.0 1.4E-39 2.9E-44 305.7 16.2 251 374-637 6-281 (318)
23 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-40 5.7E-45 349.8 11.6 247 375-644 634-894 (996)
24 KOG0597 Serine-threonine prote 100.0 1E-39 2.2E-44 334.0 15.4 238 375-638 7-252 (808)
25 KOG1094 Discoidin domain recep 100.0 1.1E-39 2.4E-44 334.8 15.4 254 374-642 542-805 (807)
26 KOG1095 Protein tyrosine kinas 100.0 2.4E-39 5.3E-44 362.2 19.5 259 375-652 697-972 (1025)
27 KOG0588 Serine/threonine prote 100.0 1.2E-39 2.6E-44 340.2 15.8 239 375-638 17-264 (786)
28 KOG4721 Serine/threonine prote 100.0 5.6E-40 1.2E-44 335.5 13.0 239 376-644 130-371 (904)
29 KOG0194 Protein tyrosine kinas 100.0 2.1E-39 4.5E-44 340.2 15.5 250 375-646 162-425 (474)
30 KOG0583 Serine/threonine prote 100.0 1.2E-38 2.6E-43 333.9 20.8 237 375-636 22-274 (370)
31 KOG1989 ARK protein kinase fam 100.0 1.2E-38 2.5E-43 346.4 20.6 248 375-645 42-315 (738)
32 KOG0616 cAMP-dependent protein 100.0 6.3E-39 1.4E-43 305.5 16.1 237 365-628 41-283 (355)
33 KOG2345 Serine/threonine prote 100.0 7E-39 1.5E-43 298.0 13.8 253 375-642 26-301 (302)
34 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-38 1.2E-42 326.0 21.6 254 375-640 10-304 (304)
35 KOG0201 Serine/threonine prote 100.0 2.2E-39 4.8E-44 324.4 10.4 238 376-637 19-263 (467)
36 KOG0580 Serine/threonine prote 100.0 1.5E-38 3.3E-43 294.5 14.0 250 363-637 17-273 (281)
37 cd05104 PTKc_Kit Catalytic dom 100.0 9.9E-38 2.1E-42 333.1 22.4 249 375-641 40-374 (375)
38 cd05571 STKc_PKB Catalytic dom 100.0 4E-38 8.8E-43 329.6 19.0 237 376-637 1-251 (323)
39 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.6E-37 5.7E-42 312.4 24.3 241 375-638 9-255 (256)
40 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-38 5.3E-43 320.6 15.2 242 375-638 4-259 (259)
41 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.5E-37 5.3E-42 314.6 22.5 244 375-641 10-265 (266)
42 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-37 2.4E-42 320.6 20.0 244 375-637 5-261 (285)
43 cd05052 PTKc_Abl Catalytic dom 100.0 3.3E-37 7.1E-42 313.1 23.3 245 375-641 11-262 (263)
44 KOG0611 Predicted serine/threo 100.0 2.9E-38 6.2E-43 311.3 14.7 238 375-638 58-304 (668)
45 cd05068 PTKc_Frk_like Catalyti 100.0 4.8E-37 1E-41 311.5 24.1 245 375-641 11-261 (261)
46 cd05048 PTKc_Ror Catalytic Dom 100.0 3.2E-37 7E-42 316.6 23.1 248 375-641 10-283 (283)
47 cd05072 PTKc_Lyn Catalytic dom 100.0 4.8E-37 1E-41 311.5 23.8 245 375-641 11-261 (261)
48 KOG0605 NDR and related serine 100.0 1.1E-37 2.5E-42 319.6 18.6 241 375-637 146-445 (550)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-37 3.2E-42 331.4 20.2 251 374-642 42-373 (374)
50 KOG2052 Activin A type IB rece 100.0 4.1E-37 8.9E-42 307.9 22.0 255 375-644 216-506 (513)
51 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-37 2.7E-42 324.3 19.2 235 378-637 1-247 (312)
52 cd05612 STKc_PRKX_like Catalyt 100.0 9.5E-38 2.1E-42 322.0 17.9 238 375-637 6-254 (291)
53 KOG3653 Transforming growth fa 100.0 5.2E-37 1.1E-41 309.4 22.5 258 376-647 216-509 (534)
54 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-37 3.6E-42 325.6 19.5 237 376-637 1-251 (328)
55 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-37 4E-42 324.6 19.6 237 376-637 1-251 (323)
56 PTZ00263 protein kinase A cata 100.0 1.7E-37 3.7E-42 325.7 18.5 238 375-637 23-271 (329)
57 PLN00034 mitogen-activated pro 100.0 3.2E-37 7E-42 327.0 20.5 238 375-637 79-328 (353)
58 KOG0663 Protein kinase PITSLRE 100.0 2E-37 4.4E-42 299.5 16.8 249 375-637 81-361 (419)
59 cd06649 PKc_MEK2 Catalytic dom 100.0 9.3E-37 2E-41 320.5 23.0 255 375-638 10-302 (331)
60 cd05588 STKc_aPKC Catalytic do 100.0 3.1E-37 6.8E-42 323.7 19.1 244 376-637 1-262 (329)
61 KOG0585 Ca2+/calmodulin-depend 100.0 4.6E-37 1E-41 309.5 19.3 251 375-653 102-383 (576)
62 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-36 2.6E-41 307.7 22.5 242 375-639 9-256 (256)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.6E-37 1E-41 323.2 19.8 246 375-637 6-257 (333)
64 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.8E-36 3.8E-41 307.2 23.4 245 375-641 11-261 (261)
65 cd05584 STKc_p70S6K Catalytic 100.0 5.7E-37 1.2E-41 321.0 20.2 237 376-637 2-256 (323)
66 cd05059 PTKc_Tec_like Catalyti 100.0 1.5E-36 3.2E-41 307.0 22.5 241 375-638 9-255 (256)
67 KOG0589 Serine/threonine prote 100.0 1.4E-37 3.1E-42 320.1 15.2 241 375-637 9-258 (426)
68 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.4E-36 5.2E-41 306.2 24.0 244 374-640 10-259 (260)
69 cd05071 PTKc_Src Catalytic dom 100.0 3.1E-36 6.7E-41 305.8 24.8 244 375-641 11-260 (262)
70 KOG0658 Glycogen synthase kina 100.0 6.6E-38 1.4E-42 308.5 12.0 260 375-644 29-315 (364)
71 cd05618 STKc_aPKC_iota Catalyt 100.0 6.1E-37 1.3E-41 321.4 19.8 244 376-637 1-262 (329)
72 KOG0660 Mitogen-activated prot 100.0 3E-37 6.6E-42 303.3 16.3 260 376-647 28-322 (359)
73 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-36 2.8E-41 325.6 22.6 251 375-643 42-399 (400)
74 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-36 2.3E-41 313.4 20.9 256 375-637 6-284 (287)
75 cd05049 PTKc_Trk Catalytic dom 100.0 3.2E-36 6.9E-41 308.6 24.2 247 375-640 10-280 (280)
76 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.2E-36 4.8E-41 306.4 22.7 243 375-640 11-259 (260)
77 PTZ00426 cAMP-dependent protei 100.0 5.8E-37 1.3E-41 322.5 18.9 238 375-637 35-284 (340)
78 KOG4257 Focal adhesion tyrosin 100.0 3.7E-37 8E-42 317.9 16.9 247 373-643 392-651 (974)
79 cd05594 STKc_PKB_alpha Catalyt 100.0 4.1E-37 8.8E-42 322.4 17.2 237 376-637 1-252 (325)
80 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-36 2.5E-41 312.1 20.0 243 378-637 1-257 (280)
81 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.5E-37 9.7E-42 316.5 17.1 250 375-637 10-285 (288)
82 cd05033 PTKc_EphR Catalytic do 100.0 3.5E-36 7.7E-41 306.0 23.5 244 375-641 9-265 (266)
83 cd05084 PTKc_Fes Catalytic dom 100.0 2.8E-36 6E-41 304.2 22.4 242 376-640 1-252 (252)
84 cd05590 STKc_nPKC_eta Catalyti 100.0 7.9E-37 1.7E-41 319.4 19.1 237 376-637 1-253 (320)
85 KOG0594 Protein kinase PCTAIRE 100.0 6.7E-37 1.5E-41 302.2 17.2 259 376-644 17-311 (323)
86 cd05054 PTKc_VEGFR Catalytic d 100.0 2.3E-36 5.1E-41 317.8 22.3 252 374-643 11-335 (337)
87 cd05108 PTKc_EGFR Catalytic do 100.0 2.2E-36 4.7E-41 315.7 21.8 246 375-644 12-271 (316)
88 cd05069 PTKc_Yes Catalytic dom 100.0 6.2E-36 1.4E-40 303.2 24.4 243 375-640 11-259 (260)
89 cd05093 PTKc_TrkB Catalytic do 100.0 3.4E-36 7.3E-41 310.0 22.8 251 375-644 10-282 (288)
90 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-36 2.3E-41 318.6 19.3 237 376-637 1-254 (321)
91 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.1E-37 2E-41 319.9 18.8 244 376-637 1-260 (327)
92 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-36 4.1E-41 307.4 20.4 239 376-639 1-262 (262)
93 cd08228 STKc_Nek6 Catalytic do 100.0 5.8E-36 1.3E-40 304.5 24.0 251 375-642 7-266 (267)
94 PTZ00267 NIMA-related protein 100.0 1.6E-36 3.4E-41 333.6 21.3 243 375-637 72-323 (478)
95 cd05116 PTKc_Syk Catalytic dom 100.0 4.8E-36 1E-40 303.5 23.2 240 377-641 2-255 (257)
96 KOG0694 Serine/threonine prote 100.0 9.5E-37 2.1E-41 321.2 18.5 240 364-631 364-613 (694)
97 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.8E-36 3.9E-41 319.4 20.8 254 375-637 5-290 (338)
98 KOG4278 Protein tyrosine kinas 100.0 4.4E-37 9.5E-42 316.7 15.4 249 375-645 272-527 (1157)
99 cd05607 STKc_GRK7 Catalytic do 100.0 2.8E-36 6.1E-41 308.7 21.4 244 378-639 1-252 (277)
100 cd05090 PTKc_Ror1 Catalytic do 100.0 5.1E-36 1.1E-40 307.8 22.9 247 375-640 10-282 (283)
101 cd05075 PTKc_Axl Catalytic dom 100.0 5.9E-36 1.3E-40 305.3 23.1 248 375-641 4-271 (272)
102 cd05592 STKc_nPKC_theta_delta 100.0 1.9E-36 4.2E-41 315.9 19.9 236 376-636 1-247 (316)
103 cd05589 STKc_PKN Catalytic dom 100.0 2.2E-36 4.8E-41 316.7 20.3 237 375-637 4-257 (324)
104 cd05062 PTKc_IGF-1R Catalytic 100.0 3.2E-36 6.9E-41 308.3 21.0 247 375-640 11-277 (277)
105 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-36 4.7E-41 315.4 20.1 236 376-636 1-247 (316)
106 PHA03212 serine/threonine kina 100.0 4.7E-36 1E-40 321.0 22.9 249 375-636 97-375 (391)
107 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-36 4.5E-41 310.7 19.3 258 375-642 9-282 (283)
108 cd05094 PTKc_TrkC Catalytic do 100.0 6.6E-36 1.4E-40 308.3 23.0 250 375-643 10-284 (291)
109 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-36 4.1E-41 309.5 18.6 238 377-639 2-274 (274)
110 cd05091 PTKc_Ror2 Catalytic do 100.0 8.8E-36 1.9E-40 306.0 23.7 247 375-640 10-282 (283)
111 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-36 4.8E-41 315.4 19.4 236 376-636 1-247 (316)
112 cd05035 PTKc_Axl_like Catalyti 100.0 1E-35 2.2E-40 303.6 23.8 248 375-641 4-272 (273)
113 cd05582 STKc_RSK_N N-terminal 100.0 7.2E-37 1.6E-41 319.6 15.6 233 376-633 2-245 (318)
114 cd05085 PTKc_Fer Catalytic dom 100.0 8.2E-36 1.8E-40 300.3 22.8 241 376-639 1-249 (250)
115 cd06650 PKc_MEK1 Catalytic dom 100.0 5.1E-36 1.1E-40 315.0 22.1 190 375-570 10-204 (333)
116 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.3E-36 1.4E-40 320.2 23.0 251 374-642 41-400 (401)
117 cd05605 STKc_GRK4_like Catalyt 100.0 3.2E-36 6.9E-41 309.7 20.0 244 375-637 5-261 (285)
118 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.5E-36 1.6E-40 309.9 22.9 252 374-644 19-299 (304)
119 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-36 9E-41 311.7 20.9 250 375-636 10-287 (303)
120 cd05570 STKc_PKC Catalytic dom 100.0 2.7E-36 5.8E-41 315.1 19.5 237 376-637 1-252 (318)
121 cd05115 PTKc_Zap-70 Catalytic 100.0 7E-36 1.5E-40 302.3 22.0 241 377-641 2-255 (257)
122 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-36 4.7E-41 316.6 18.8 232 376-632 1-242 (323)
123 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-35 2.9E-40 302.5 24.1 248 376-642 1-269 (270)
124 KOG0574 STE20-like serine/thre 100.0 7.7E-38 1.7E-42 297.5 7.0 242 375-638 38-284 (502)
125 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-35 2.5E-40 302.3 23.4 251 375-642 7-266 (267)
126 cd05034 PTKc_Src_like Catalyti 100.0 9.2E-36 2E-40 301.9 22.6 244 375-640 11-260 (261)
127 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.2E-36 1.6E-40 305.7 21.9 247 375-640 11-277 (277)
128 cd05082 PTKc_Csk Catalytic dom 100.0 1E-35 2.3E-40 300.8 22.7 243 375-641 11-256 (256)
129 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.6E-36 7.9E-41 306.5 19.5 248 377-639 2-268 (269)
130 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-35 4.4E-40 302.7 24.9 246 375-644 12-271 (279)
131 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6E-36 1.3E-40 302.8 20.6 238 376-639 1-259 (259)
132 cd00192 PTKc Catalytic domain 100.0 1.4E-35 3.1E-40 300.0 23.2 245 376-639 1-262 (262)
133 cd05053 PTKc_FGFR Catalytic do 100.0 8.9E-36 1.9E-40 307.6 21.9 249 375-642 17-292 (293)
134 cd05060 PTKc_Syk_like Catalyti 100.0 1.3E-35 2.8E-40 300.2 22.7 242 376-642 1-256 (257)
135 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-36 6.1E-41 320.9 18.6 189 375-570 6-238 (363)
136 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.8E-36 3.8E-41 321.1 16.9 241 375-637 6-285 (350)
137 PTZ00283 serine/threonine prot 100.0 5.5E-36 1.2E-40 329.5 21.3 243 375-637 37-297 (496)
138 cd05596 STKc_ROCK Catalytic do 100.0 4.1E-36 8.9E-41 320.0 19.6 241 375-637 48-304 (370)
139 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-35 3.2E-40 303.8 22.9 251 375-644 11-279 (280)
140 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.9E-36 4.1E-41 306.6 16.0 239 376-639 1-258 (258)
141 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-35 2.9E-40 302.0 22.3 244 375-641 10-267 (268)
142 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-35 3.2E-40 306.6 22.9 254 375-647 7-281 (297)
143 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-36 2.9E-41 319.3 15.1 242 375-637 6-263 (330)
144 cd06619 PKc_MKK5 Catalytic dom 100.0 1.4E-35 2.9E-40 304.0 22.2 242 375-637 6-253 (279)
145 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-35 2.7E-40 305.1 21.9 252 375-642 9-284 (284)
146 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-35 3.7E-40 299.3 22.6 242 376-639 1-256 (257)
147 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-35 3.7E-40 299.0 22.6 241 375-638 9-255 (256)
148 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-35 4.1E-40 298.8 22.9 244 375-641 11-256 (256)
149 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-35 4.2E-40 299.7 23.0 244 376-642 1-260 (262)
150 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-35 2.3E-40 308.5 21.6 253 375-646 12-285 (303)
151 cd05626 STKc_LATS2 Catalytic d 100.0 3.1E-36 6.8E-41 322.6 18.1 242 375-637 6-305 (381)
152 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.4E-35 7.4E-40 298.7 24.8 251 375-642 7-266 (267)
153 cd05599 STKc_NDR_like Catalyti 100.0 3.3E-36 7.2E-41 320.7 18.2 241 375-637 6-296 (364)
154 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.5E-35 3.2E-40 308.1 22.6 251 375-644 23-302 (307)
155 cd05042 PTKc_Aatyk Catalytic d 100.0 1.3E-35 2.8E-40 302.4 21.4 248 377-639 2-268 (269)
156 cd05603 STKc_SGK2 Catalytic do 100.0 3.9E-36 8.5E-41 314.4 18.0 232 376-632 1-242 (321)
157 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-35 3.3E-40 305.4 22.1 250 375-643 5-288 (290)
158 KOG0033 Ca2+/calmodulin-depend 100.0 9E-38 2E-42 289.4 4.8 241 375-637 16-267 (355)
159 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-35 3.9E-40 304.8 22.3 251 375-637 6-287 (290)
160 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-35 2.7E-40 306.9 21.0 254 375-640 10-296 (296)
161 cd05602 STKc_SGK1 Catalytic do 100.0 5.4E-36 1.2E-40 313.9 18.5 235 376-635 1-245 (325)
162 cd06646 STKc_MAP4K5 Catalytic 100.0 9.7E-36 2.1E-40 302.9 19.7 244 375-638 14-266 (267)
163 cd05614 STKc_MSK2_N N-terminal 100.0 7.6E-36 1.6E-40 313.9 19.5 242 375-637 5-267 (332)
164 cd08529 STKc_FA2-like Catalyti 100.0 2.9E-35 6.4E-40 297.2 23.0 241 375-637 5-253 (256)
165 cd05100 PTKc_FGFR3 Catalytic d 100.0 2E-35 4.3E-40 310.9 22.6 252 373-643 15-295 (334)
166 cd05604 STKc_SGK3 Catalytic do 100.0 3.2E-36 7E-41 315.6 16.5 234 376-634 1-244 (325)
167 KOG0577 Serine/threonine prote 100.0 9.9E-37 2.1E-41 313.0 12.2 243 376-641 32-282 (948)
168 cd05587 STKc_cPKC Catalytic do 100.0 8.7E-36 1.9E-40 312.2 19.6 238 375-637 5-257 (324)
169 cd05109 PTKc_HER2 Catalytic do 100.0 3.4E-35 7.4E-40 301.0 23.5 246 375-644 12-271 (279)
170 cd05055 PTKc_PDGFR Catalytic d 100.0 2.6E-35 5.7E-40 305.4 22.8 246 375-641 40-301 (302)
171 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-35 4.5E-40 302.8 21.6 247 375-640 10-280 (280)
172 cd05073 PTKc_Hck Catalytic dom 100.0 3.6E-35 7.7E-40 297.6 23.0 243 375-640 11-259 (260)
173 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3E-35 6.5E-40 302.3 22.7 250 375-641 10-270 (284)
174 cd05621 STKc_ROCK2 Catalytic d 100.0 8.7E-36 1.9E-40 317.2 19.4 241 375-637 48-304 (370)
175 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-35 5.2E-40 300.4 21.8 244 375-641 9-268 (269)
176 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-35 3.2E-40 303.2 20.1 247 375-640 11-277 (277)
177 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.1E-35 4.6E-40 311.7 21.9 253 373-643 10-341 (343)
178 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.2E-35 7E-40 302.0 22.5 251 374-641 8-283 (284)
179 cd05616 STKc_cPKC_beta Catalyt 100.0 1E-35 2.3E-40 311.5 19.0 238 375-637 5-257 (323)
180 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-35 2.8E-40 306.8 19.4 239 376-637 26-270 (296)
181 PTZ00036 glycogen synthase kin 100.0 1.2E-35 2.7E-40 322.8 20.1 250 375-637 71-351 (440)
182 cd07868 STKc_CDK8 Catalytic do 100.0 5.1E-35 1.1E-39 305.5 23.9 194 375-572 6-220 (317)
183 cd05629 STKc_NDR_like_fungal C 100.0 7.9E-36 1.7E-40 319.2 18.0 241 375-637 6-305 (377)
184 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-35 5.5E-40 307.4 21.4 255 374-647 16-299 (314)
185 cd06637 STKc_TNIK Catalytic do 100.0 1.6E-35 3.4E-40 302.2 19.3 242 375-637 11-269 (272)
186 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.5E-35 7.6E-40 301.4 22.0 252 375-642 9-284 (284)
187 cd05095 PTKc_DDR2 Catalytic do 100.0 2.2E-35 4.8E-40 305.1 20.6 254 375-640 10-296 (296)
188 cd05044 PTKc_c-ros Catalytic d 100.0 2.9E-35 6.2E-40 299.7 20.9 245 377-640 2-269 (269)
189 cd05630 STKc_GRK6 Catalytic do 100.0 1.9E-35 4.1E-40 303.9 19.6 243 376-637 6-261 (285)
190 cd06625 STKc_MEKK3_like Cataly 100.0 4.7E-35 1E-39 297.0 22.1 240 375-637 7-260 (263)
191 cd05066 PTKc_EphR_A Catalytic 100.0 5E-35 1.1E-39 297.8 22.2 244 375-641 9-266 (267)
192 cd05050 PTKc_Musk Catalytic do 100.0 3.5E-35 7.7E-40 302.3 21.3 247 375-640 10-288 (288)
193 cd05598 STKc_LATS Catalytic do 100.0 7.8E-36 1.7E-40 319.3 17.0 241 375-637 6-301 (376)
194 cd05041 PTKc_Fes_like Catalyti 100.0 6.1E-35 1.3E-39 294.1 22.6 241 376-639 1-250 (251)
195 cd06612 STKc_MST1_2 Catalytic 100.0 2.9E-35 6.2E-40 297.3 20.1 241 375-637 8-253 (256)
196 KOG0599 Phosphorylase kinase g 100.0 3.5E-36 7.6E-41 282.9 12.2 243 375-638 22-284 (411)
197 cd05061 PTKc_InsR Catalytic do 100.0 4.9E-35 1.1E-39 301.4 22.0 248 375-641 11-278 (288)
198 PRK13184 pknD serine/threonine 100.0 2.8E-35 6.1E-40 332.2 21.8 253 375-644 7-293 (932)
199 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-35 3.4E-40 317.5 18.8 241 375-637 6-305 (382)
200 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-35 2.7E-40 309.0 17.5 253 375-637 11-286 (309)
201 cd05632 STKc_GRK5 Catalytic do 100.0 3.9E-35 8.5E-40 301.6 20.8 243 376-637 6-261 (285)
202 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-35 5.3E-40 314.9 20.0 249 375-637 5-288 (372)
203 KOG0667 Dual-specificity tyros 100.0 1.2E-35 2.7E-40 313.0 17.2 191 375-571 191-391 (586)
204 cd08227 PK_STRAD_alpha Pseudok 100.0 5.2E-35 1.1E-39 306.8 21.7 250 376-637 4-307 (327)
205 cd05097 PTKc_DDR_like Catalyti 100.0 2.3E-35 5E-40 304.9 18.5 254 375-640 10-295 (295)
206 cd06643 STKc_SLK Catalytic dom 100.0 4.1E-35 8.9E-40 300.9 20.1 243 374-637 9-262 (282)
207 cd05615 STKc_cPKC_alpha Cataly 100.0 3.4E-35 7.3E-40 307.5 19.7 232 375-631 5-246 (323)
208 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-34 3.1E-39 294.6 23.6 247 377-639 2-267 (268)
209 cd05622 STKc_ROCK1 Catalytic d 100.0 3.3E-35 7.2E-40 313.0 19.4 242 375-638 48-305 (371)
210 PHA03211 serine/threonine kina 100.0 8.4E-35 1.8E-39 315.2 22.8 251 375-637 174-455 (461)
211 cd06656 STKc_PAK3 Catalytic do 100.0 4.3E-35 9.2E-40 303.1 19.6 239 375-636 24-268 (297)
212 KOG0610 Putative serine/threon 100.0 6E-35 1.3E-39 290.5 19.7 242 375-637 82-392 (459)
213 cd06615 PKc_MEK Catalytic doma 100.0 5.1E-35 1.1E-39 304.2 20.1 254 375-638 6-288 (308)
214 PF00069 Pkinase: Protein kina 100.0 1.5E-35 3.2E-40 300.0 15.6 245 375-637 4-257 (260)
215 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.1E-35 1.1E-39 299.4 19.7 238 375-637 9-253 (277)
216 KOG1025 Epidermal growth facto 100.0 6.7E-36 1.5E-40 317.3 13.5 253 368-644 694-960 (1177)
217 cd06655 STKc_PAK2 Catalytic do 100.0 3.6E-35 7.8E-40 303.5 18.6 239 376-637 25-269 (296)
218 PHA03209 serine/threonine kina 100.0 9.2E-35 2E-39 308.4 22.1 182 375-568 71-256 (357)
219 cd05056 PTKc_FAK Catalytic dom 100.0 1E-34 2.2E-39 296.0 21.5 246 375-644 11-268 (270)
220 KOG0584 Serine/threonine prote 100.0 7.2E-36 1.6E-40 311.7 13.1 240 376-637 46-296 (632)
221 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-34 2.3E-39 293.2 21.2 241 375-637 5-252 (255)
222 PTZ00284 protein kinase; Provi 100.0 1.8E-35 3.9E-40 325.0 16.6 252 375-637 134-438 (467)
223 KOG4717 Serine/threonine prote 100.0 5.5E-35 1.2E-39 295.8 18.4 248 376-652 24-280 (864)
224 PHA03207 serine/threonine kina 100.0 8.4E-35 1.8E-39 312.5 20.9 248 375-637 97-375 (392)
225 cd06631 STKc_YSK4 Catalytic do 100.0 5.3E-35 1.1E-39 297.2 18.3 240 375-636 5-261 (265)
226 cd05586 STKc_Sck1_like Catalyt 100.0 2.9E-35 6.3E-40 309.1 16.9 236 378-637 1-253 (330)
227 cd06645 STKc_MAP4K3 Catalytic 100.0 7.5E-35 1.6E-39 296.4 19.4 243 375-637 14-265 (267)
228 cd07867 STKc_CDC2L6 Catalytic 100.0 8.8E-35 1.9E-39 303.7 20.3 193 375-571 6-219 (317)
229 cd05057 PTKc_EGFR_like Catalyt 100.0 3.5E-34 7.7E-39 293.5 24.4 245 375-643 12-270 (279)
230 cd07876 STKc_JNK2 Catalytic do 100.0 9.9E-35 2.1E-39 308.7 20.8 254 375-638 26-316 (359)
231 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-34 4.6E-39 290.8 22.1 241 375-640 11-253 (254)
232 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-34 5E-39 290.8 22.3 242 375-638 5-254 (256)
233 cd05627 STKc_NDR2 Catalytic do 100.0 3.7E-35 8E-40 312.1 16.8 241 375-637 6-293 (360)
234 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-34 2.5E-39 295.3 19.7 243 376-637 14-265 (268)
235 cd06638 STKc_myosinIIIA Cataly 100.0 8.9E-35 1.9E-39 299.0 18.8 246 375-638 23-284 (286)
236 cd05110 PTKc_HER4 Catalytic do 100.0 2.3E-34 5.1E-39 298.5 22.0 246 375-644 12-271 (303)
237 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.9E-34 4.1E-39 304.7 21.6 248 375-637 20-298 (343)
238 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-34 2.9E-39 298.7 20.0 242 375-637 17-269 (292)
239 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.7E-34 5.9E-39 292.2 21.6 239 375-637 5-264 (267)
240 cd07863 STKc_CDK4 Catalytic do 100.0 5.7E-35 1.2E-39 300.7 16.8 251 375-637 5-285 (288)
241 cd08223 STKc_Nek4 Catalytic do 100.0 4E-34 8.6E-39 289.2 22.6 241 375-637 5-254 (257)
242 cd06640 STKc_MST4 Catalytic do 100.0 5.7E-34 1.2E-38 291.7 23.7 238 375-637 9-253 (277)
243 cd06609 STKc_MST3_like Catalyt 100.0 3.2E-34 7E-39 292.9 21.7 239 375-637 6-251 (274)
244 cd06659 STKc_PAK6 Catalytic do 100.0 7.5E-35 1.6E-39 301.2 17.1 240 376-638 27-272 (297)
245 cd06613 STKc_MAP4K3_like Catal 100.0 8.8E-34 1.9E-38 287.4 24.6 244 375-637 8-260 (262)
246 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-34 6.7E-39 289.9 21.1 241 375-637 5-253 (256)
247 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-34 3.1E-39 298.3 19.0 244 376-637 28-287 (291)
248 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.2E-35 1.6E-39 302.1 16.9 251 376-636 12-285 (301)
249 cd06658 STKc_PAK5 Catalytic do 100.0 6.6E-35 1.4E-39 300.9 16.5 240 375-637 27-272 (292)
250 KOG0199 ACK and related non-re 100.0 5.6E-35 1.2E-39 305.4 15.9 244 374-640 114-371 (1039)
251 cd07874 STKc_JNK3 Catalytic do 100.0 2.3E-34 4.9E-39 305.5 20.8 253 375-637 22-311 (355)
252 KOG0032 Ca2+/calmodulin-depend 100.0 5E-34 1.1E-38 298.7 23.0 245 376-647 41-298 (382)
253 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-34 6.6E-39 305.5 21.8 247 375-637 29-318 (364)
254 cd05597 STKc_DMPK_like Catalyt 100.0 3E-34 6.6E-39 301.3 21.3 244 375-637 6-266 (331)
255 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-33 2.3E-38 288.9 24.3 248 375-641 4-272 (273)
256 KOG4279 Serine/threonine prote 100.0 2.2E-35 4.8E-40 307.7 11.9 242 377-637 582-832 (1226)
257 cd07861 STKc_CDK1_euk Catalyti 100.0 5E-34 1.1E-38 293.2 21.8 251 376-637 6-282 (285)
258 cd06611 STKc_SLK_like Catalyti 100.0 1.4E-34 3.1E-39 296.6 17.7 242 375-637 10-262 (280)
259 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.1E-34 1.3E-38 292.6 22.3 252 376-637 7-283 (286)
260 PTZ00266 NIMA-related protein 100.0 4.1E-34 8.8E-39 324.0 22.5 249 375-641 18-301 (1021)
261 cd05623 STKc_MRCK_alpha Cataly 100.0 2.1E-34 4.6E-39 302.7 18.9 244 375-637 6-266 (332)
262 smart00219 TyrKc Tyrosine kina 100.0 6.3E-34 1.4E-38 287.6 21.6 242 375-638 4-258 (258)
263 cd06607 STKc_TAO Catalytic dom 100.0 1.1E-33 2.4E-38 294.1 23.8 241 375-638 20-268 (307)
264 cd08528 STKc_Nek10 Catalytic d 100.0 6.3E-34 1.4E-38 289.9 21.4 247 375-640 5-269 (269)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.9E-34 1.5E-38 292.4 21.9 245 375-637 6-262 (286)
266 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.3E-34 5E-39 295.3 18.1 242 375-637 21-279 (282)
267 cd05046 PTK_CCK4 Pseudokinase 100.0 9.3E-34 2E-38 289.7 22.5 246 376-639 11-274 (275)
268 cd05624 STKc_MRCK_beta Catalyt 100.0 2E-34 4.2E-39 302.8 17.9 244 375-637 6-266 (331)
269 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-34 7E-39 292.6 18.8 245 375-637 11-272 (275)
270 cd08220 STKc_Nek8 Catalytic do 100.0 9.1E-34 2E-38 286.3 21.9 241 375-637 5-253 (256)
271 cd06651 STKc_MEKK3 Catalytic d 100.0 8.2E-34 1.8E-38 288.7 21.7 239 375-637 7-261 (266)
272 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-33 2.3E-38 291.3 22.6 253 376-637 7-266 (287)
273 cd06647 STKc_PAK_I Catalytic d 100.0 4.9E-34 1.1E-38 294.6 20.0 240 375-637 24-269 (293)
274 cd06630 STKc_MEKK1 Catalytic d 100.0 5.4E-34 1.2E-38 290.1 19.9 243 375-637 5-264 (268)
275 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.5E-34 1.9E-38 289.4 21.0 244 375-637 6-269 (272)
276 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-33 5.3E-38 292.8 24.6 245 375-642 30-282 (317)
277 cd05633 STKc_GRK3 Catalytic do 100.0 4.5E-34 9.7E-39 292.7 18.6 239 377-637 1-255 (279)
278 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.3E-34 1.8E-38 291.2 20.6 244 375-637 6-261 (283)
279 cd06648 STKc_PAK_II Catalytic 100.0 4.1E-34 8.9E-39 294.0 18.3 239 375-636 24-268 (285)
280 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-33 2.3E-38 286.0 21.0 239 376-637 6-255 (258)
281 cd06605 PKc_MAPKK Catalytic do 100.0 7E-34 1.5E-38 288.8 19.8 246 375-637 6-257 (265)
282 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.3E-34 7.1E-39 294.7 17.4 250 375-637 6-283 (286)
283 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-33 2.3E-38 290.7 20.9 250 376-637 6-281 (284)
284 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-33 3.1E-38 288.7 21.9 238 375-637 9-253 (277)
285 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-33 2.7E-38 286.6 21.2 238 378-636 1-251 (262)
286 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-33 2.6E-38 287.1 21.0 247 375-637 6-264 (267)
287 cd06614 STKc_PAK Catalytic dom 100.0 6.8E-34 1.5E-38 292.5 19.3 241 376-637 25-270 (286)
288 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-33 3.4E-38 285.7 21.7 242 376-637 6-262 (265)
289 KOG0983 Mitogen-activated prot 100.0 1E-34 2.2E-39 273.3 11.9 256 360-637 84-349 (391)
290 cd05574 STKc_phototropin_like 100.0 1.5E-33 3.3E-38 294.2 22.2 241 376-637 7-289 (316)
291 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-33 2.8E-38 292.2 21.4 249 375-636 5-281 (298)
292 cd07839 STKc_CDK5 Catalytic do 100.0 5.4E-34 1.2E-38 292.8 18.3 250 376-637 6-281 (284)
293 KOG1006 Mitogen-activated prot 100.0 3.6E-36 7.8E-41 282.1 1.6 249 376-637 70-327 (361)
294 cd06626 STKc_MEKK4 Catalytic d 100.0 9E-34 2E-38 287.7 19.4 241 375-636 5-260 (264)
295 cd06616 PKc_MKK4 Catalytic dom 100.0 7.8E-34 1.7E-38 292.3 19.2 248 375-637 9-267 (288)
296 KOG0596 Dual specificity; seri 100.0 1.1E-34 2.4E-39 297.1 12.5 248 367-637 358-627 (677)
297 PHA03390 pk1 serine/threonine- 100.0 2.3E-33 5E-38 285.5 21.9 234 378-636 24-261 (267)
298 cd07833 STKc_CDKL Catalytic do 100.0 1.5E-33 3.3E-38 290.0 20.6 253 375-637 6-285 (288)
299 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-33 4.7E-38 283.7 21.1 241 375-637 5-254 (257)
300 cd08226 PK_STRAD_beta Pseudoki 100.0 3.5E-33 7.5E-38 293.1 23.2 251 376-638 4-309 (328)
301 cd05609 STKc_MAST Catalytic do 100.0 7.4E-34 1.6E-38 295.1 17.9 242 376-639 7-272 (305)
302 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-33 3.4E-38 290.5 20.1 251 375-637 10-288 (291)
303 KOG1024 Receptor-like protein 100.0 2.1E-34 4.5E-39 283.3 12.7 253 375-646 289-560 (563)
304 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-33 3.2E-38 288.4 19.4 239 375-637 6-255 (277)
305 cd06652 STKc_MEKK2 Catalytic d 100.0 3.9E-33 8.4E-38 283.5 22.3 239 375-637 7-261 (265)
306 cd06623 PKc_MAPKK_plant_like C 100.0 3.2E-33 6.9E-38 283.6 21.5 242 375-637 6-256 (264)
307 cd05580 STKc_PKA Catalytic dom 100.0 3E-33 6.5E-38 288.3 21.3 238 375-637 6-254 (290)
308 KOG0607 MAP kinase-interacting 100.0 4E-34 8.6E-39 274.6 13.5 261 366-636 74-360 (463)
309 cd07832 STKc_CCRK Catalytic do 100.0 3.5E-33 7.5E-38 287.0 21.4 253 375-637 5-282 (286)
310 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-33 5E-38 287.1 20.0 240 378-636 1-253 (277)
311 cd05611 STKc_Rim15_like Cataly 100.0 3.1E-33 6.6E-38 283.3 20.6 240 376-636 2-247 (260)
312 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-33 2.6E-38 286.0 17.5 240 375-636 5-254 (258)
313 cd05122 PKc_STE Catalytic doma 100.0 1.8E-33 3.9E-38 282.8 18.7 242 375-637 5-251 (253)
314 cd06657 STKc_PAK4 Catalytic do 100.0 1.4E-33 3E-38 291.0 18.0 239 376-637 26-270 (292)
315 KOG0579 Ste20-like serine/thre 100.0 9.1E-35 2E-39 300.2 8.8 242 375-637 37-289 (1187)
316 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.4E-33 7.5E-38 288.0 20.1 250 376-637 11-288 (291)
317 cd06634 STKc_TAO2 Catalytic do 100.0 8.4E-33 1.8E-37 287.5 23.2 243 375-640 20-270 (308)
318 cd07842 STKc_CDK8_like Catalyt 100.0 3.9E-33 8.5E-38 291.0 20.7 259 376-637 6-313 (316)
319 cd07843 STKc_CDC2L1 Catalytic 100.0 6.2E-33 1.3E-37 286.4 22.0 249 375-637 10-290 (293)
320 cd07837 STKc_CdkB_plant Cataly 100.0 5.8E-33 1.3E-37 286.8 21.1 254 375-637 6-291 (295)
321 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-32 2.4E-37 287.5 23.1 252 375-638 7-296 (314)
322 cd07835 STKc_CDK1_like Catalyt 100.0 4.5E-33 9.7E-38 285.8 19.9 251 375-637 4-280 (283)
323 cd07831 STKc_MOK Catalytic dom 100.0 8.8E-33 1.9E-37 283.4 21.7 252 375-637 4-279 (282)
324 cd05606 STKc_beta_ARK Catalyti 100.0 5.7E-33 1.2E-37 284.4 20.1 239 377-637 1-255 (278)
325 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-32 3.7E-37 285.8 24.0 240 375-637 26-273 (313)
326 cd07849 STKc_ERK1_2_like Catal 100.0 3.5E-33 7.6E-38 294.1 18.9 258 375-644 10-301 (336)
327 cd05579 STKc_MAST_like Catalyt 100.0 5.4E-33 1.2E-37 281.8 19.3 239 378-639 1-256 (265)
328 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-34 3E-39 321.8 8.1 241 375-638 1240-1495(1509)
329 PHA03210 serine/threonine kina 100.0 1.6E-33 3.5E-38 310.8 16.4 257 375-637 153-454 (501)
330 cd06618 PKc_MKK7 Catalytic dom 100.0 3.4E-33 7.4E-38 288.8 17.6 243 374-637 19-273 (296)
331 cd07836 STKc_Pho85 Catalytic d 100.0 4.3E-33 9.3E-38 286.1 18.0 252 375-637 5-281 (284)
332 cd06606 STKc_MAPKKK Catalytic 100.0 1.4E-32 3E-37 277.6 21.3 240 376-637 6-257 (260)
333 cd07865 STKc_CDK9 Catalytic do 100.0 4.8E-33 1E-37 289.4 18.5 252 375-637 17-307 (310)
334 KOG0986 G protein-coupled rece 100.0 4.6E-34 9.9E-39 286.0 10.2 238 375-631 190-435 (591)
335 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-32 2.6E-37 277.9 20.4 243 375-637 5-253 (256)
336 KOG0604 MAP kinase-activated p 100.0 9.2E-34 2E-38 270.2 11.1 246 372-636 64-321 (400)
337 cd05118 STKc_CMGC Catalytic do 100.0 1.4E-32 3E-37 282.0 20.8 249 376-637 5-280 (283)
338 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-32 3.4E-37 282.0 21.2 248 376-637 5-284 (287)
339 KOG0200 Fibroblast/platelet-de 100.0 9E-33 1.9E-37 309.6 20.9 257 365-641 293-579 (609)
340 cd07838 STKc_CDK4_6_like Catal 100.0 2.8E-32 6.1E-37 280.3 23.0 251 375-637 4-284 (287)
341 PHA02882 putative serine/threo 100.0 1.1E-32 2.3E-37 284.7 19.9 246 375-638 17-293 (294)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.9E-33 1.1E-37 293.1 17.3 260 375-645 10-301 (337)
343 cd07845 STKc_CDK10 Catalytic d 100.0 4.8E-33 1E-37 289.5 16.5 250 375-637 12-290 (309)
344 PLN00009 cyclin-dependent kina 100.0 6.6E-33 1.4E-37 286.3 17.4 251 375-637 7-284 (294)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 2.7E-32 5.8E-37 275.0 21.3 238 375-636 5-250 (254)
346 KOG0666 Cyclin C-dependent kin 100.0 2.5E-33 5.3E-38 268.4 12.4 261 375-638 29-338 (438)
347 PTZ00024 cyclin-dependent prot 100.0 1.4E-32 3.1E-37 289.4 19.4 251 375-636 14-312 (335)
348 cd07852 STKc_MAPK15 Catalytic 100.0 2.4E-32 5.1E-37 287.9 20.7 255 375-641 12-301 (337)
349 cd07855 STKc_ERK5 Catalytic do 100.0 5.1E-33 1.1E-37 292.6 15.6 253 375-638 10-295 (334)
350 cd07850 STKc_JNK Catalytic dom 100.0 3.4E-32 7.3E-37 288.6 21.8 253 375-637 21-311 (353)
351 cd08215 STKc_Nek Catalytic dom 100.0 3.8E-32 8.2E-37 274.3 21.2 242 376-637 6-255 (258)
352 cd07830 STKc_MAK_like Catalyti 100.0 2.8E-32 6E-37 279.9 19.8 257 375-637 4-280 (283)
353 cd07879 STKc_p38delta_MAPK13 C 100.0 9.5E-32 2.1E-36 283.8 24.2 254 375-644 20-306 (342)
354 KOG4250 TANK binding protein k 100.0 9E-33 1.9E-37 292.0 15.4 260 376-641 19-310 (732)
355 cd07834 STKc_MAPK Catalytic do 100.0 8E-32 1.7E-36 283.1 22.7 256 375-644 5-298 (330)
356 cd05613 STKc_MSK1_N N-terminal 100.0 5.8E-32 1.3E-36 278.7 20.6 242 375-637 5-268 (290)
357 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.1E-32 1.3E-36 283.4 21.1 254 375-637 15-288 (328)
358 cd06653 STKc_MEKK3_like_1 Cata 100.0 9E-32 2E-36 273.3 21.7 239 375-637 7-261 (264)
359 cd05123 STKc_AGC Catalytic dom 100.0 5.1E-32 1.1E-36 272.5 19.5 234 378-636 1-246 (250)
360 cd08222 STKc_Nek11 Catalytic d 100.0 4.4E-32 9.6E-37 274.8 18.9 242 375-637 5-257 (260)
361 KOG1035 eIF-2alpha kinase GCN2 100.0 6.9E-33 1.5E-37 307.0 13.9 239 376-636 485-870 (1351)
362 cd07864 STKc_CDK12 Catalytic d 100.0 4.4E-32 9.6E-37 281.2 19.2 253 375-637 12-299 (302)
363 KOG0586 Serine/threonine prote 100.0 9.7E-33 2.1E-37 288.1 14.1 238 375-637 61-306 (596)
364 cd07866 STKc_BUR1 Catalytic do 100.0 4.6E-32 1E-36 282.2 19.3 250 375-637 13-308 (311)
365 cd05583 STKc_MSK_N N-terminal 100.0 6.2E-32 1.3E-36 278.2 20.0 245 375-640 5-266 (288)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.9E-31 6.3E-36 280.1 24.8 254 375-643 20-306 (343)
367 cd07829 STKc_CDK_like Catalyti 100.0 9.9E-32 2.1E-36 275.5 20.6 249 376-637 5-279 (282)
368 cd05581 STKc_PDK1 Catalytic do 100.0 4.5E-32 9.8E-37 277.6 17.4 238 375-637 6-277 (280)
369 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.1E-31 4.5E-36 281.5 22.5 248 376-638 23-301 (345)
370 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-31 2.9E-36 282.7 20.9 248 375-637 10-300 (342)
371 cd05576 STKc_RPK118_like Catal 100.0 7.7E-32 1.7E-36 269.3 16.6 219 381-632 4-224 (237)
372 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-31 3.2E-36 281.2 18.5 255 375-637 5-292 (332)
373 cd07851 STKc_p38 Catalytic dom 100.0 8.7E-32 1.9E-36 284.2 16.6 248 375-637 20-298 (343)
374 KOG0612 Rho-associated, coiled 100.0 1.6E-32 3.5E-37 301.7 11.2 242 375-638 80-339 (1317)
375 KOG0587 Traf2- and Nck-interac 100.0 1.4E-31 3.1E-36 288.0 17.4 243 375-637 24-282 (953)
376 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-31 5.4E-36 302.5 17.8 139 375-520 9-152 (669)
377 KOG0662 Cyclin-dependent kinas 100.0 5E-31 1.1E-35 233.7 13.9 250 375-637 7-283 (292)
378 KOG0690 Serine/threonine prote 100.0 6.5E-32 1.4E-36 259.8 9.0 190 375-571 173-371 (516)
379 KOG0603 Ribosomal protein S6 k 100.0 2.9E-31 6.3E-36 278.6 14.0 233 375-637 327-563 (612)
380 KOG4236 Serine/threonine prote 100.0 5.4E-32 1.2E-36 274.8 7.9 240 375-636 569-818 (888)
381 KOG0671 LAMMER dual specificit 100.0 6.1E-32 1.3E-36 266.7 7.2 253 375-637 94-406 (415)
382 KOG0984 Mitogen-activated prot 100.0 3.8E-31 8.3E-36 239.8 11.0 204 365-571 41-255 (282)
383 KOG0669 Cyclin T-dependent kin 100.0 2.4E-32 5.3E-37 254.4 2.9 256 376-638 23-316 (376)
384 smart00220 S_TKc Serine/Threon 100.0 6.1E-30 1.3E-34 255.2 20.4 234 382-636 1-240 (244)
385 KOG1151 Tousled-like protein k 100.0 5.7E-31 1.2E-35 262.4 11.5 245 375-636 468-740 (775)
386 KOG0696 Serine/threonine prote 100.0 7.5E-31 1.6E-35 259.6 11.4 230 375-629 354-593 (683)
387 PLN03225 Serine/threonine-prot 100.0 7.1E-30 1.5E-34 283.4 17.7 252 375-637 137-450 (566)
388 PLN03224 probable serine/threo 100.0 1.7E-29 3.7E-34 273.4 18.9 250 375-637 150-500 (507)
389 KOG0614 cGMP-dependent protein 100.0 1.4E-30 2.9E-35 264.0 6.9 240 376-638 426-678 (732)
390 KOG1027 Serine/threonine prote 100.0 2.3E-30 5.1E-35 277.5 8.1 239 375-637 514-767 (903)
391 KOG0664 Nemo-like MAPK-related 100.0 7.5E-31 1.6E-35 246.9 2.8 255 376-639 59-345 (449)
392 KOG0608 Warts/lats-like serine 100.0 3.1E-29 6.8E-34 259.7 13.1 193 376-575 635-878 (1034)
393 KOG0668 Casein kinase II, alph 100.0 2.1E-29 4.6E-34 231.7 10.1 249 375-637 43-322 (338)
394 KOG0695 Serine/threonine prote 100.0 1.1E-28 2.4E-33 238.3 12.3 237 375-629 255-502 (593)
395 cd00180 PKc Catalytic domain o 100.0 3.1E-27 6.6E-32 229.9 20.4 206 378-638 1-215 (215)
396 KOG1152 Signal transduction se 99.9 4.4E-28 9.5E-33 249.6 9.6 188 375-569 566-770 (772)
397 KOG1290 Serine/threonine prote 99.9 1.2E-26 2.7E-31 235.1 18.3 127 375-506 83-222 (590)
398 KOG0576 Mitogen-activated prot 99.9 4.3E-28 9.3E-33 253.7 5.1 241 376-636 21-270 (829)
399 KOG0670 U4/U6-associated splic 99.9 1.3E-27 2.9E-32 243.0 7.5 257 376-637 438-746 (752)
400 KOG0665 Jun-N-terminal kinase 99.9 2.3E-27 5.1E-32 229.1 7.4 246 376-637 23-310 (369)
401 smart00221 STYKc Protein kinas 99.9 1.2E-25 2.6E-30 221.8 18.6 190 375-570 4-202 (225)
402 KOG1345 Serine/threonine kinas 99.9 1.3E-25 2.8E-30 211.8 11.6 255 365-638 20-285 (378)
403 PLN00181 protein SPA1-RELATED; 99.9 3.6E-25 7.7E-30 258.3 11.5 191 421-637 28-265 (793)
404 PLN00113 leucine-rich repeat r 99.9 6.9E-25 1.5E-29 262.8 14.2 205 9-216 7-238 (968)
405 smart00750 KIND kinase non-cat 99.9 3.1E-24 6.8E-29 203.8 15.6 168 450-642 1-170 (176)
406 KOG1167 Serine/threonine prote 99.9 1.5E-24 3.3E-29 217.5 10.1 252 375-638 41-382 (418)
407 KOG0195 Integrin-linked kinase 99.9 6.1E-25 1.3E-29 207.1 6.7 246 375-642 195-447 (448)
408 PRK09188 serine/threonine prot 99.9 1.2E-21 2.6E-26 203.8 14.9 152 375-543 23-195 (365)
409 KOG1165 Casein kinase (serine/ 99.9 6.3E-21 1.4E-25 185.3 15.7 254 374-645 32-303 (449)
410 KOG1164 Casein kinase (serine/ 99.8 7.3E-20 1.6E-24 190.9 19.6 259 375-652 23-308 (322)
411 COG0515 SPS1 Serine/threonine 99.8 2E-19 4.3E-24 187.4 22.3 251 376-637 6-275 (384)
412 KOG0590 Checkpoint kinase and 99.8 2.7E-21 5.9E-26 214.2 7.0 245 375-636 323-584 (601)
413 cd05147 RIO1_euk RIO kinase fa 99.8 3.3E-20 7.1E-25 177.5 12.1 138 376-523 3-168 (190)
414 KOG1163 Casein kinase (serine/ 99.8 5.7E-20 1.2E-24 171.1 12.2 191 375-573 20-226 (341)
415 PLN03150 hypothetical protein; 99.8 7.1E-20 1.5E-24 206.0 15.3 132 27-162 367-510 (623)
416 KOG1023 Natriuretic peptide re 99.8 1.1E-19 2.4E-24 192.1 13.4 215 419-645 1-228 (484)
417 cd05145 RIO1_like RIO kinase f 99.8 2.7E-19 5.8E-24 171.8 14.8 138 376-524 3-169 (190)
418 PRK12274 serine/threonine prot 99.8 4.1E-19 8.9E-24 167.9 14.3 180 375-573 7-212 (218)
419 PRK10359 lipopolysaccharide co 99.8 9.3E-20 2E-24 176.2 9.8 163 375-562 36-216 (232)
420 KOG4158 BRPK/PTEN-induced prot 99.8 2.1E-19 4.6E-24 178.4 11.4 191 423-638 274-511 (598)
421 KOG1240 Protein kinase contain 99.8 5.1E-20 1.1E-24 203.2 7.0 239 375-639 28-293 (1431)
422 KOG0603 Ribosomal protein S6 k 99.8 2.7E-20 5.9E-25 196.3 4.0 224 377-631 1-232 (612)
423 PF14531 Kinase-like: Kinase-l 99.8 9.7E-19 2.1E-23 174.2 9.1 228 375-628 17-288 (288)
424 PRK10345 hypothetical protein; 99.7 9.1E-18 2E-22 162.1 13.0 133 375-519 7-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.7 1.9E-17 4E-22 187.1 10.3 184 375-567 703-902 (974)
426 PRK14879 serine/threonine prot 99.7 1.1E-16 2.4E-21 156.7 14.3 133 376-521 2-143 (211)
427 smart00090 RIO RIO-like kinase 99.7 1.2E-16 2.6E-21 158.2 13.5 141 375-524 33-200 (237)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 2.6E-16 5.6E-21 152.6 13.1 130 377-522 1-139 (199)
429 KOG0617 Ras suppressor protein 99.7 1.3E-18 2.8E-23 154.0 -2.7 156 68-229 32-191 (264)
430 cd05144 RIO2_C RIO kinase fami 99.7 2.9E-16 6.3E-21 152.0 12.8 132 375-523 20-176 (198)
431 PRK09605 bifunctional UGMP fam 99.7 3.4E-16 7.4E-21 174.4 14.4 131 375-522 338-477 (535)
432 cd05119 RIO RIO kinase family, 99.6 2.5E-15 5.4E-20 144.1 9.7 135 376-524 3-166 (187)
433 KOG1033 eIF-2alpha kinase PEK/ 99.6 7.3E-16 1.6E-20 160.0 5.3 118 439-563 330-457 (516)
434 cd05120 APH_ChoK_like Aminogly 99.6 4.3E-15 9.2E-20 136.7 9.8 133 376-522 4-139 (155)
435 KOG0606 Microtubule-associated 99.6 7E-16 1.5E-20 170.9 5.0 197 375-631 88-306 (1205)
436 KOG4194 Membrane glycoprotein 99.6 2.5E-16 5.3E-21 163.6 1.1 153 63-216 263-418 (873)
437 PRK01723 3-deoxy-D-manno-octul 99.6 2.2E-14 4.9E-19 142.3 14.8 138 373-523 34-193 (239)
438 KOG0617 Ras suppressor protein 99.6 7.6E-17 1.6E-21 142.8 -4.9 141 69-215 56-197 (264)
439 KOG4237 Extracellular matrix p 99.6 1.1E-15 2.3E-20 152.3 2.6 147 70-218 68-350 (498)
440 KOG0444 Cytoskeletal regulator 99.5 1.6E-15 3.4E-20 158.5 -0.9 159 69-231 103-288 (1255)
441 KOG0444 Cytoskeletal regulator 99.5 2.2E-15 4.8E-20 157.4 -1.8 144 69-215 126-317 (1255)
442 KOG4194 Membrane glycoprotein 99.5 7.3E-14 1.6E-18 145.5 6.4 147 70-218 79-225 (873)
443 KOG0590 Checkpoint kinase and 99.4 1.4E-14 3.1E-19 160.9 0.8 242 376-636 26-285 (601)
444 TIGR01982 UbiB 2-polyprenylphe 99.4 1E-12 2.3E-17 141.7 12.6 140 376-524 123-309 (437)
445 KOG0472 Leucine-rich repeat pr 99.4 4.6E-15 1E-19 148.0 -6.6 152 70-229 138-293 (565)
446 PLN03150 hypothetical protein; 99.4 2.2E-13 4.7E-18 153.7 5.8 108 120-227 420-532 (623)
447 KOG1266 Protein kinase [Signal 99.4 4.1E-13 9E-18 131.2 6.6 199 418-639 120-333 (458)
448 KOG0472 Leucine-rich repeat pr 99.4 1.8E-13 3.8E-18 136.8 2.2 130 70-203 389-541 (565)
449 cd05151 ChoK Choline Kinase (C 99.3 7.7E-12 1.7E-16 117.7 10.6 129 376-521 4-136 (170)
450 KOG0532 Leucine-rich repeat (L 99.2 2.2E-13 4.8E-18 141.8 -4.5 152 71-231 100-254 (722)
451 PRK04750 ubiB putative ubiquin 99.2 1E-11 2.2E-16 135.4 6.8 139 376-524 125-316 (537)
452 KOG1243 Protein kinase [Genera 99.2 4E-10 8.7E-15 121.0 17.3 163 391-566 34-201 (690)
453 PRK15370 E3 ubiquitin-protein 99.2 1.5E-11 3.2E-16 139.6 6.8 123 65-203 174-296 (754)
454 PRK15387 E3 ubiquitin-protein 99.2 1.3E-11 2.9E-16 139.2 6.1 105 94-215 342-446 (788)
455 PRK15370 E3 ubiquitin-protein 99.2 2.8E-11 6.1E-16 137.4 8.3 143 69-228 199-342 (754)
456 KOG0601 Cyclin-dependent kinas 99.2 2.6E-11 5.5E-16 129.0 7.1 238 374-636 118-378 (524)
457 KOG0618 Serine/threonine phosp 99.2 3.1E-12 6.7E-17 140.4 -0.1 131 70-204 311-466 (1081)
458 PF14580 LRR_9: Leucine-rich r 99.2 8.9E-12 1.9E-16 115.8 2.4 109 91-204 16-127 (175)
459 PRK15387 E3 ubiquitin-protein 99.1 7.6E-11 1.6E-15 133.2 8.7 113 70-203 223-335 (788)
460 KOG1259 Nischarin, modulator o 99.1 4.2E-12 9.1E-17 122.5 -1.6 130 70-206 285-415 (490)
461 KOG0618 Serine/threonine phosp 99.1 4E-12 8.6E-17 139.6 -2.1 129 69-202 359-488 (1081)
462 PF14580 LRR_9: Leucine-rich r 99.1 1.5E-11 3.2E-16 114.3 1.5 120 70-196 20-146 (175)
463 cd05154 ACAD10_11_like Acyl-Co 99.1 7.7E-10 1.7E-14 108.9 12.3 140 376-521 4-206 (223)
464 cd05146 RIO3_euk RIO kinase fa 99.1 1.6E-09 3.5E-14 102.8 13.8 135 376-523 3-175 (197)
465 PLN03210 Resistant to P. syrin 99.0 1.2E-09 2.7E-14 132.2 10.6 148 70-223 590-737 (1153)
466 KOG0601 Cyclin-dependent kinas 99.0 2.9E-10 6.3E-15 121.1 4.4 240 376-643 271-520 (524)
467 cd00116 LRR_RI Leucine-rich re 99.0 6.6E-11 1.4E-15 123.5 -1.5 135 69-204 81-235 (319)
468 PLN03210 Resistant to P. syrin 99.0 1.7E-09 3.8E-14 131.0 10.4 144 61-209 627-821 (1153)
469 COG3642 Mn2+-dependent serine/ 99.0 1.1E-08 2.3E-13 93.8 12.8 132 376-523 2-142 (204)
470 KOG3087 Serine/threonine prote 98.9 1.1E-08 2.3E-13 93.3 12.1 141 376-522 13-166 (229)
471 KOG0532 Leucine-rich repeat (L 98.9 8.7E-11 1.9E-15 122.8 -1.4 137 67-212 119-255 (722)
472 KOG3741 Poly(A) ribonuclease s 98.9 3.4E-08 7.3E-13 103.1 16.8 171 382-567 288-475 (655)
473 PF13855 LRR_8: Leucine rich r 98.9 7.6E-10 1.7E-14 84.6 3.0 59 95-153 2-60 (61)
474 PRK15123 lipopolysaccharide co 98.9 3.4E-08 7.5E-13 99.2 15.1 141 375-521 27-194 (268)
475 KOG4237 Extracellular matrix p 98.9 3E-10 6.6E-15 113.9 -0.1 133 80-217 57-191 (498)
476 PF13855 LRR_8: Leucine rich r 98.9 1.1E-09 2.4E-14 83.8 2.8 60 143-202 2-61 (61)
477 cd00116 LRR_RI Leucine-rich re 98.9 1.2E-10 2.5E-15 121.7 -4.0 136 69-205 51-208 (319)
478 COG4886 Leucine-rich repeat (L 98.8 1.4E-09 2.9E-14 117.3 3.7 130 69-204 116-246 (394)
479 COG4886 Leucine-rich repeat (L 98.8 1.6E-09 3.6E-14 116.6 3.8 153 59-218 80-236 (394)
480 KOG0606 Microtubule-associated 98.8 1.1E-09 2.4E-14 122.5 1.4 235 376-632 810-1084(1205)
481 PF01163 RIO1: RIO1 family; I 98.8 4.8E-08 1E-12 92.4 10.9 125 385-523 1-157 (188)
482 KOG1259 Nischarin, modulator o 98.8 7.9E-10 1.7E-14 107.0 -1.9 130 92-227 282-415 (490)
483 KOG4579 Leucine-rich repeat (L 98.7 8.4E-10 1.8E-14 95.0 -3.5 141 69-214 27-170 (177)
484 COG4248 Uncharacterized protei 98.7 1.6E-07 3.5E-12 95.7 12.0 264 375-647 16-306 (637)
485 KOG3207 Beta-tubulin folding c 98.6 7.4E-09 1.6E-13 105.5 1.1 134 69-203 146-284 (505)
486 COG0478 RIO-like serine/threon 98.6 6.4E-07 1.4E-11 87.2 12.0 135 372-522 93-252 (304)
487 PRK09902 hypothetical protein; 98.5 3.2E-06 7E-11 80.5 14.9 137 378-521 26-179 (216)
488 KOG3207 Beta-tubulin folding c 98.5 3.6E-08 7.7E-13 100.6 1.1 134 69-203 172-314 (505)
489 KOG2137 Protein kinase [Signal 98.5 4.2E-08 9.2E-13 106.1 1.7 144 478-636 107-264 (700)
490 PF08263 LRRNT_2: Leucine rich 98.5 1.8E-07 3.9E-12 65.6 3.9 37 31-67 2-43 (43)
491 KOG4579 Leucine-rich repeat (L 98.4 2.3E-08 4.9E-13 86.3 -1.2 113 69-185 53-165 (177)
492 COG0661 AarF Predicted unusual 98.4 7.7E-07 1.7E-11 96.8 10.2 141 376-525 131-318 (517)
493 KOG1859 Leucine-rich repeat pr 98.4 4.1E-09 8.9E-14 113.2 -8.1 127 95-228 165-296 (1096)
494 PF06293 Kdo: Lipopolysacchari 98.4 3.2E-06 6.9E-11 82.1 12.6 108 409-523 55-172 (206)
495 KOG1859 Leucine-rich repeat pr 98.4 3.3E-09 7.2E-14 113.9 -10.0 126 70-203 165-292 (1096)
496 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 7.1E-06 1.5E-10 80.8 13.4 137 376-520 7-181 (226)
497 COG1718 RIO1 Serine/threonine 98.2 1.9E-05 4.2E-10 76.3 13.4 135 377-523 55-217 (268)
498 KOG0531 Protein phosphatase 1, 98.2 2E-07 4.4E-12 100.8 -0.5 125 71-203 74-199 (414)
499 KOG4658 Apoptotic ATPase [Sign 98.1 1.8E-06 4E-11 100.1 4.0 128 70-201 524-653 (889)
500 KOG0531 Protein phosphatase 1, 98.1 9.3E-07 2E-11 95.7 0.3 126 69-203 95-221 (414)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-60 Score=569.84 Aligned_cols=275 Identities=29% Similarity=0.501 Sum_probs=219.2
Q ss_pred cCHHHHHHHh--hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccE
Q 006055 365 FDLEDLLRAS--AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKL 441 (663)
Q Consensus 365 ~~~~~l~~~~--~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 441 (663)
++.+++.... .++||+|+||.||+|.. .+|..||||+++..... ..+|++.+++++||||++++++|.+.+..+
T Consensus 683 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~ 759 (968)
T PLN00113 683 ITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAY 759 (968)
T ss_pred hhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCE
Confidence 4445544433 45899999999999995 67999999998754322 234688899999999999999999999999
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-CcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-PNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+||||+++|+|.++++. ++|..+.+|+.|+|+|++|||..+ ++|+||||||+||+++.++.+++. ||...
T Consensus 760 lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~ 830 (968)
T PLN00113 760 LIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG 830 (968)
T ss_pred EEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence 99999999999999962 789999999999999999999653 569999999999999999988876 66665
Q ss_pred ccCCCCCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 521 LVGPSSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 521 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
.........++.+|+|||++.+..++.++|||||||++|||+||+.||+.... ....+..|++..........++|+.+
T Consensus 831 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (968)
T PLN00113 831 LLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSI 909 (968)
T ss_pred ccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccc
Confidence 54444444567889999999999999999999999999999999999965432 23456777765554444444555544
Q ss_pred hcc-cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCC
Q 006055 601 LRY-QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGL 652 (663)
Q Consensus 601 ~~~-~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~ 652 (663)
... ....++..++.+++.+||+.||++||||+||+++|+++.........+.
T Consensus 910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~~~~~ 962 (968)
T PLN00113 910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCVTGL 962 (968)
T ss_pred cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccccccCc
Confidence 221 2234567788999999999999999999999999999977655555443
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-54 Score=450.23 Aligned_cols=281 Identities=42% Similarity=0.701 Sum_probs=249.4
Q ss_pred CCcccCHHHHHHHh-----hcccccccceEEEEEEecCCcEEEEEEecCcccC-HHHHHHHHHHhhcCCCCCcccceEEE
Q 006055 361 AARVFDLEDLLRAS-----AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS-EREFKDKIEGVGAVNHENLVPLRAYY 434 (663)
Q Consensus 361 ~~~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~ 434 (663)
..+.|++.++..|| .++||+|+||.||+|.+.+|+.||||++...... .++|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 34679999999998 4699999999999999999999999998876544 77899999999999999999999999
Q ss_pred EecC-ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-CcceecCCCCCCEEEcCCCceE
Q 006055 435 YSMD-EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-PNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 435 ~~~~-~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-~~iiHrdlk~~Nill~~~~~~k 512 (663)
.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+ |+||||||||+|||+|+++.+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9998 499999999999999999975532 7899999999999999999999987 7899999999999999999999
Q ss_pred EeccccccccCC-CCC---C-CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHH
Q 006055 513 VSDFGLAHLVGP-SST---P-NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIV 587 (663)
Q Consensus 513 l~Dfg~a~~~~~-~~~---~-~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 587 (663)
|+|||+|+.... ... . .+|.||+||||+..+..++|+|||||||+++|++||+.|.+.........+..|+...+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999976654 322 1 68889999999999999999999999999999999999988765444556999999999
Q ss_pred hhcccccccchhhhcccCh-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 588 KDEWTSEVFDLELLRYQNV-EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~-~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.+....+++|+.+...... .+++.++.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 9989999999998643333 26888899999999999999999999999999776544
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-46 Score=387.84 Aligned_cols=260 Identities=34% Similarity=0.494 Sum_probs=213.0
Q ss_pred ccCHHHHHHHhhcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC-c
Q 006055 364 VFDLEDLLRASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD-E 439 (663)
Q Consensus 364 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~ 439 (663)
.++..++. ..+.||+|+||+||+|.++....||||++.....+ .+.|.+|+.+|.+++|||||+++|+|.+.. .
T Consensus 37 ~i~~~~l~--~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 37 EIDPDELP--IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred ecChHHhh--hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 34555553 35669999999999999984444999999876433 458999999999999999999999999887 7
Q ss_pred cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEecccc
Q 006055 440 KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGL 518 (663)
Q Consensus 440 ~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~ 518 (663)
.++|||||++|+|.++++.. ....+++..+++++.|||+|+.|||+++| ||||||||+|||++.++ ++||+|||+
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCcc
Confidence 99999999999999999874 23469999999999999999999999985 99999999999999998 999999999
Q ss_pred ccccCCC---C-CCCCCccccCccccC--CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 519 AHLVGPS---S-TPNRVAGYRAPEVTD--PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 519 a~~~~~~---~-~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
++..... . ...+|..|||||++. ...|++|+||||||+++|||+||+.||..... ...+..+.....
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~~- 263 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGGL- 263 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcCC-
Confidence 9877642 2 246788899999999 56899999999999999999999999975432 222222222221
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
+...+..+...+..++.+||..||++||++.|++..|+.+....
T Consensus 264 ---------Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 264 ---------RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred ---------CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 11112235567888889999999999999999999999775543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-46 Score=367.12 Aligned_cols=253 Identities=28% Similarity=0.390 Sum_probs=211.0
Q ss_pred cCHHHHHHHhhcccccccceEEEEEEe-cCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecC-cc
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-EK 440 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~ 440 (663)
+++.|+.+ .+.||+|..|+|||+.+ .+++.+|+|.+... ....+++.+|+++++..+||+||+++|.|.... +.
T Consensus 76 i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 56667633 57899999999999995 57899999999543 233678999999999999999999999999988 49
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
.++||||++|+|++++...+ .+++....+|+.+|++||.|||+ ++ ||||||||+|||++..|++||||||.+
T Consensus 154 sI~mEYMDgGSLd~~~k~~g-----~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVG-----RIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred EeehhhcCCCCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccCCCEEecccccc
Confidence 99999999999999998643 48999999999999999999996 55 999999999999999999999999999
Q ss_pred cccCCC--CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 520 HLVGPS--STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 520 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
+.+... .+..||..|||||.+.+..|+.++||||||+.++|+.+|+.||... .....+..+.+..+..+..+
T Consensus 227 ~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~-~~~~~~~~~Ll~~Iv~~ppP----- 300 (364)
T KOG0581|consen 227 GILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP-NPPYLDIFELLCAIVDEPPP----- 300 (364)
T ss_pred HHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc-CCCCCCHHHHHHHHhcCCCC-----
Confidence 877654 4566888999999999999999999999999999999999999764 12223444444444433211
Q ss_pred hhhhcccChH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 598 LELLRYQNVE-EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 598 ~~~~~~~~~~-~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
..+. .+..++..++-.|+++||.+||+++|+++|=
T Consensus 301 ------~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 301 ------RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred ------CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1112 3566788889999999999999999999863
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=376.80 Aligned_cols=256 Identities=29% Similarity=0.432 Sum_probs=217.9
Q ss_pred cCHHHHHHHhhcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEE
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 444 (663)
++.+++ ...+.||+|-||+||.|.++....||+|.++........|.+|+.+|++|+|+|||+++++|..++..+|||
T Consensus 203 i~r~~l--~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 203 IPREEL--KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred ecHHHH--HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 444444 446789999999999999998889999999988888899999999999999999999999999988999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
|||+.|+|.++|+... ...+.....+.++.|||+|++||++++ +|||||.++||||+++..+||+|||+|+....
T Consensus 281 E~m~~GsLl~yLr~~~---~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTRE---GGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EecccCcHHHHhhhcC---CCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccCceEEEcccccccccCC
Confidence 9999999999998632 345888999999999999999999998 99999999999999999999999999996554
Q ss_pred CCCCC-----CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 525 SSTPN-----RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 525 ~~~~~-----~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
+.... ....|.|||.+....++.|+|||||||+|+||+| |+.||....+ .+.+..+-+..
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn------~ev~~~le~Gy-------- 421 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN------EEVLELLERGY-------- 421 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH------HHHHHHHhccC--------
Confidence 43322 2334999999999999999999999999999999 9999876543 23333332222
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+.+.+..++..+.++|..||+.+|++|||++.+...|+++...
T Consensus 422 ---Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 ---RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 2233455777899999999999999999999999999988654
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=341.55 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=207.5
Q ss_pred hhcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceE-EEEecCc-cEEEEEcc
Q 006055 374 SAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRA-YYYSMDE-KLLVYDYL 447 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lv~ey~ 447 (663)
..++||+|.||+||++. ..+|..||.|.++-...+ ......|+.++++++|||||++++ .+.++.+ ..+||||+
T Consensus 23 Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c 102 (375)
T KOG0591|consen 23 ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELC 102 (375)
T ss_pred HHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhh
Confidence 45789999999999998 788999999999855444 456889999999999999999998 4555555 78999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCc--ceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPN--VSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~--iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
..|+|..+++..+ .....+++..+++++.|++.||.++|..-|. |+||||||.||+++.+|.+||+|||++++....
T Consensus 103 ~~GDLsqmIk~~K-~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~ 181 (375)
T KOG0591|consen 103 DAGDLSQMIKHFK-KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK 181 (375)
T ss_pred cccCHHHHHHHHH-hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcch
Confidence 9999999997654 2355699999999999999999999985444 999999999999999999999999999998765
Q ss_pred C----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 526 S----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 526 ~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
. +..||+.||+||.++...|+.|+||||+||++|||+.-++||.+. ++....+.+.+....
T Consensus 182 ~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qgd~~--------- 246 (375)
T KOG0591|consen 182 TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQGDYP--------- 246 (375)
T ss_pred hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcCCCC---------
Confidence 4 356899999999999999999999999999999999999999753 455555554444221
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
.-..+.++.++.+++..|+..||+.||+.-.+++.+.
T Consensus 247 -~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 247 -PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 0112456778999999999999999999655555543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-43 Score=366.27 Aligned_cols=239 Identities=26% Similarity=0.424 Sum_probs=205.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+++||+|||+.||+++. .+|+.||+|++.+. ....+...+||++.+.|+|||||+++++|++.+..|+|.|+|.+
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~ 102 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHR 102 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCC
Confidence 57899999999999995 88999999999763 33456789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|..+++. +.++++.++..+..||+.||.|||+++ |+|||||-.|++++++.++||+|||+|..+....
T Consensus 103 ~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 103 GSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK 175 (592)
T ss_pred ccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcCcEEecccceeeeecCccccc
Confidence 999999984 346999999999999999999999998 9999999999999999999999999999887442
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
+..||+.|+|||++....++..+||||+||++|-|+.|++||+.. ++.+....+...++ ..
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk------~vkety~~Ik~~~Y------------~~ 237 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK------TVKETYNKIKLNEY------------SM 237 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc------hHHHHHHHHHhcCc------------cc
Confidence 345788899999999999999999999999999999999999642 23333444433322 22
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+.....+..++|.++++.+|.+|||+++|+.+=
T Consensus 238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 238 PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 234445677888899999999999999999853
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.2e-44 Score=352.87 Aligned_cols=243 Identities=28% Similarity=0.447 Sum_probs=197.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC--------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS--------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.|-+|. .++|+.||||++++.... ...+.+|+++|++++|||||+++++|..++..|+|||
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE 256 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLE 256 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEE
Confidence 5789999999999998 678999999999754221 2346799999999999999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC---CceEEecccccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS---YEARVSDFGLAHLV 522 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~---~~~kl~Dfg~a~~~ 522 (663)
|+++|+|.+.+-..+ .+.+..-..+++|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+|+..
T Consensus 257 ~v~GGeLfd~vv~nk-----~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 257 YVEGGELFDKVVANK-----YLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred EecCccHHHHHHhcc-----ccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999887544 3667777889999999999999999 9999999999999766 67999999999998
Q ss_pred CCCC---CCCCCccccCccccCCCC---CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCK---VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
+... +..||+.|.|||++.+.. +..++|+||+||++|-+++|.+||...... ....+++.+..+...
T Consensus 330 g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-----~sl~eQI~~G~y~f~-- 402 (475)
T KOG0615|consen 330 GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-----PSLKEQILKGRYAFG-- 402 (475)
T ss_pred ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC-----ccHHHHHhcCccccc--
Confidence 7543 445889999999997654 344789999999999999999999764322 122333443333211
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....+...+..+++.+++..||++|||+.|+++|
T Consensus 403 ------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 403 ------PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11123345567778889999999999999999984
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-42 Score=340.02 Aligned_cols=189 Identities=29% Similarity=0.420 Sum_probs=170.3
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|+||+||+|+ .+++..||||.+...... .+.+..|+.+++.++|||||++++++..++..+||||||.+|+
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD 95 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD 95 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence 459999999999999 456899999999766433 3557899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC------CceEEeccccccccCCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS------YEARVSDFGLAHLVGPS 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~------~~~kl~Dfg~a~~~~~~ 525 (663)
|.++++..+ .+++......+.|+|.||++||+++ ||||||||.||||+.. -.+||+|||+|+.+.+.
T Consensus 96 Ls~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 96 LSDYIRRRG-----RLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 999999754 5899999999999999999999998 9999999999999865 45899999999999876
Q ss_pred CC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 526 ST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 526 ~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
.. ..|++-|||||++....|+.|+|+||+|+++|++++|+.||+..
T Consensus 169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 43 45677799999999999999999999999999999999999853
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-42 Score=374.93 Aligned_cols=251 Identities=28% Similarity=0.443 Sum_probs=212.1
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|.||+||+|+. ++.+.||||.+++... ...+|++|+++++.++|||||+++|.|.+++..++|+||
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 56899999999999983 2356799999997743 468899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC-----C----CCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 447 LTMGSLSALLHGNKGA-----G----RTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-----~----~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
|..|||.++|+..... . +.+++-.+.+.||.|||.|++||-++. ++||||..+|+||.++..|||+|||
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge~l~VKIsDfG 648 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGENLVVKISDFG 648 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceeccceEEEecccc
Confidence 9999999999754321 1 334899999999999999999999997 9999999999999999999999999
Q ss_pred cccccCCCCCCC------CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 518 LAHLVGPSSTPN------RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 518 ~a~~~~~~~~~~------~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
+++..=..+.+. -...|||||.+..+++++++|||||||+|||+++ |+.||.+..+++ |-..++.+
T Consensus 649 LsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------VIe~i~~g 721 (774)
T KOG1026|consen 649 LSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------VIECIRAG 721 (774)
T ss_pred cchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------HHHHHHcC
Confidence 998754433322 2346999999999999999999999999999999 999998876654 22222222
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.. ..-++.++.++.+|+..||...|++||+++||-..|+.....
T Consensus 722 ~l----------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 722 QL----------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred Cc----------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 21 234567788999999999999999999999999999987554
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.1e-42 Score=326.54 Aligned_cols=254 Identities=25% Similarity=0.335 Sum_probs=195.8
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++|+|+||.||+++. .+|+.||||++...+.+ .+-..+|++++++++|+|+|.++++|......+|||||++..-
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTv 87 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTV 87 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHH
Confidence 5799999999999994 56999999999776543 4567899999999999999999999999999999999999855
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC-CCCC---
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG-PSST--- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~-~~~~--- 527 (663)
|.++-+.. ..++.....+++.|+++|+.|+|+++ +|||||||+||||+.++.+||||||+|+... +.+.
T Consensus 88 L~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD 160 (396)
T KOG0593|consen 88 LHELERYP-----NGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD 160 (396)
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence 55544332 34888999999999999999999998 9999999999999999999999999999887 4433
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC--------ChHHHHHHHHhhcc-c-----
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV--------DLPRWVQSIVKDEW-T----- 592 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~--------~~~~~~~~~~~~~~-~----- 592 (663)
...|..|+|||.+.+ ..|+..+||||+||++.||++|.+-|.+.++-+.. ++...-++++..+. .
T Consensus 161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l 240 (396)
T KOG0593|consen 161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL 240 (396)
T ss_pred hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence 235667999999987 68999999999999999999999998765432210 11111122222111 0
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+.-+++.++. .......-+++++..|++.||++|++-+|++.+
T Consensus 241 P~~~~~epLe~-k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 241 PEPEHPEPLER-KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred CCCCCccchhh-hcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11111111100 011223357889999999999999999999865
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=334.58 Aligned_cols=231 Identities=27% Similarity=0.352 Sum_probs=194.7
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||.++ ..+++.+|+|.+++... ..+....|..++..++||.||+++-.|.+.+.+|+|+||+.|
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~G 109 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNG 109 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCC
Confidence 4789999999999999 55699999999987633 245688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|.|..+|+.+. .+++..+..++.+|+.||.|||+++ ||||||||+|||+|.+|+++|+|||+++.....
T Consensus 110 GeLf~hL~~eg-----~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t 182 (357)
T KOG0598|consen 110 GELFYHLQREG-----RFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT 182 (357)
T ss_pred ccHHHHHHhcC-----CcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc
Confidence 99999998644 5889989999999999999999999 999999999999999999999999999865433
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.+..||+.|||||++.+..|+..+|.||+|+++|||++|.+||.. .+...+.+.+.+..... .+
T Consensus 183 ~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~------~~~~~~~~~I~~~k~~~---------~p- 246 (357)
T KOG0598|consen 183 RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA------EDVKKMYDKILKGKLPL---------PP- 246 (357)
T ss_pred ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC------ccHHHHHHHHhcCcCCC---------CC-
Confidence 223577889999999999999999999999999999999999964 45556666666554110 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP 629 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP 629 (663)
.-...+..+++.+.+..||++|.
T Consensus 247 -~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 247 -GYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -ccCCHHHHHHHHHHhccCHHHhc
Confidence 11223456667789999999995
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=342.06 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=201.4
Q ss_pred HhhcccccccceEEEEEE-ecCCcEEEEEEecCcccC--HHHHHHHHHHhhcCC-CCCcccceEEEEecC-ccEEEEEcc
Q 006055 373 ASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS--EREFKDKIEGVGAVN-HENLVPLRAYYYSMD-EKLLVYDYL 447 (663)
Q Consensus 373 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lv~ey~ 447 (663)
.+.++||.|+||+||+|+ ..+|..||||+++..... +-.-.+|+..+++++ |||||++.+.+.+.+ ..++|||||
T Consensus 13 ~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~M 92 (538)
T KOG0661|consen 13 TVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFM 92 (538)
T ss_pred HHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhh
Confidence 346789999999999999 778999999999876444 334568999999998 999999999998888 899999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
+. +|+++++.. ...+++..+..|+.||++||+|+|++| +.|||+||+|||+.....+||+|||+||.......
T Consensus 93 d~-NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 93 DC-NLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred hh-hHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccceeEecccccccccccCCC
Confidence 87 999999864 357999999999999999999999999 99999999999999999999999999998865432
Q ss_pred ---CCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh----cccc-----c
Q 006055 528 ---PNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD----EWTS-----E 594 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~ 594 (663)
+..|..|+|||++. ...|+.+.||||+|||++|+.+-++-|.+..+.+. +.. +-.++.. .+.+ .
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq--i~K-Ic~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ--IYK-ICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH--HHH-HHHHhCCCccccchhHHHHHH
Confidence 34566799999974 56789999999999999999999999876433210 111 1111111 1111 0
Q ss_pred ccchhhhccc------ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 595 VFDLELLRYQ------NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 595 ~~d~~~~~~~------~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.+...+.... -......+.++++.+|+..||++|||+.|++++-
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 0111111100 0123567888999999999999999999999864
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-41 Score=345.97 Aligned_cols=240 Identities=25% Similarity=0.375 Sum_probs=201.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC-HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS-EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.++||+|+.|.||.|. ..+++.||||++....+. ++-+.+|+.+|+..+|+|||.+++.|...++.|+|||||++|+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 3679999999999998 667899999999877555 45578999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
.+++... .+++.++..|+.++++||+|||.++ |+|||||.+|||++.+|.+||+|||++...... .+.
T Consensus 358 TDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~Tm 429 (550)
T KOG0578|consen 358 TDVVTKT------RMTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTM 429 (550)
T ss_pred hhhhhcc------cccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccc
Confidence 9999754 3899999999999999999999999 999999999999999999999999999876554 345
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.||+.|||||+.....|+.|+||||||++++||+.|.+||-.. +....+.-+...+. + .....+.
T Consensus 430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE------~PlrAlyLIa~ng~------P---~lk~~~k 494 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE------NPLRALYLIATNGT------P---KLKNPEK 494 (550)
T ss_pred cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC------ChHHHHHHHhhcCC------C---CcCCccc
Confidence 6899999999999999999999999999999999999998531 11111111111111 1 1122334
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++.+|+..|+++||++.|+++|
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 45567777789999999999999999986
No 15
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=335.37 Aligned_cols=257 Identities=17% Similarity=0.320 Sum_probs=206.4
Q ss_pred cccCHHHHHHHhhcccccccceEEEEEEecCCcEEEEEEecCcccCH----HHHHHHHHHhhcCCCCCcccceEEEEe--
Q 006055 363 RVFDLEDLLRASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISE----REFKDKIEGVGAVNHENLVPLRAYYYS-- 436 (663)
Q Consensus 363 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~----~~~~~e~~~l~~l~h~niv~l~~~~~~-- 436 (663)
+.++.+++.......||+|++|.||+|.. +|+.||||.++...... +.+.+|+.++.+++||||+++++++.+
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~ 91 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV 91 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence 34566666555557899999999999998 58999999997654332 567799999999999999999999877
Q ss_pred --cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEE
Q 006055 437 --MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARV 513 (663)
Q Consensus 437 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl 513 (663)
....++||||+++|+|.++++.. ..+++.....++.+++.||.|||+. + ++||||||+||++++++.+||
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~~~~kl 164 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTENYKLKI 164 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCCCcEEE
Confidence 34678999999999999999753 2588999999999999999999985 5 789999999999999999999
Q ss_pred eccccccccCCCC-CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 514 SDFGLAHLVGPSS-TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 514 ~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
+|||+++...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+....
T Consensus 165 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~------~~~~~~~i~~~~ 238 (283)
T PHA02988 165 ICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT------TKEIYDLIINKN 238 (283)
T ss_pred cccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcC
Confidence 9999998654432 2346778999999976 678999999999999999999999996432 222333332222
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
... ..+......+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 239 ~~~----------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 239 NSL----------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCC----------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 110 0111234568888999999999999999999999998753
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=333.52 Aligned_cols=247 Identities=26% Similarity=0.409 Sum_probs=197.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC-HHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS-EREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey~~~g 450 (663)
.+.||+|+||+||++.. ++|+..|||.+...... .+.+.+|+.++.+++|||||+.+|.....+ ..++.|||+++|
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G 101 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG 101 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence 57899999999999995 45999999998655211 456899999999999999999999865555 588999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCC-----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGP----- 524 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~----- 524 (663)
+|.+++....+ .+++..+++.+.||++||.|||+++ |+||||||+|||++. ++.+||+|||+++....
T Consensus 102 sL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 102 SLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred cHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 99999987542 4899999999999999999999998 999999999999999 79999999999987653
Q ss_pred --CCCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 525 --SSTPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 525 --~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
.....+|+.|||||++..+ ....++||||+||++.||+||+.||... .....++-.+.......
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P-------- 242 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLP-------- 242 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCC--------
Confidence 1234578889999999853 3335899999999999999999999753 11122222222221111
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
..+.....+..+++.+|+..+|++|||++|++++.....
T Consensus 243 --~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 243 --EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred --CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 112224446677888999999999999999999876543
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=326.83 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=199.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||.|..++||+|. .+.++.||||++.-. ..+-..+.+|+..|+.++||||++++..|..+...|+||.||.+|+
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS 110 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGS 110 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCc
Confidence 5789999999999999 777899999998654 2334789999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
+.+++...- ...+++..+..|.+++++||.|||++| .||||||+.||||+.+|.+||+|||....+...
T Consensus 111 ~ldIik~~~---~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~ 185 (516)
T KOG0582|consen 111 LLDIIKTYY---PDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVT 185 (516)
T ss_pred HHHHHHHHc---cccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeE
Confidence 999998644 234899999999999999999999999 999999999999999999999999987655432
Q ss_pred --CCCCCCccccCccccC--CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 526 --STPNRVAGYRAPEVTD--PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 526 --~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
.+..+++.|||||+++ ...|+.|+||||||++..||.+|..||..... .+.+-..+++..+.- . ....
T Consensus 186 rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP------mkvLl~tLqn~pp~~-~-t~~~ 257 (516)
T KOG0582|consen 186 RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP------MKVLLLTLQNDPPTL-L-TSGL 257 (516)
T ss_pred eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh------HHHHHHHhcCCCCCc-c-cccC
Confidence 2335778899999954 35799999999999999999999999975321 111112222221100 0 0000
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
...........+.+++..|+.+||.+|||+++++++=
T Consensus 258 ~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 258 DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 1111223345788889999999999999999998753
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-40 Score=334.95 Aligned_cols=248 Identities=28% Similarity=0.406 Sum_probs=196.5
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|+ ..+|+.||+|++.... .......+||.+|++|.||||+++.+..++. ...|||||||+
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd 201 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD 201 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence 4789999999999999 7889999999987543 2356678999999999999999999999887 67899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
. ||.-++... ...++..++.-++.|++.||+|||.++ |+|||||.+|||||.+|.+||+|||+|+++......
T Consensus 202 h-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 202 H-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred c-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 8 999888753 346899999999999999999999999 999999999999999999999999999988766533
Q ss_pred C-----CCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh------hccccccc
Q 006055 529 N-----RVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK------DEWTSEVF 596 (663)
Q Consensus 529 ~-----~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 596 (663)
. .|..|.|||++.|. .|+..+|+||.||||.||++|++.|.+..+ +..+..+++ +.++. ..
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE------veQl~kIfklcGSP~e~~W~-~~ 347 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE------VEQLHKIFKLCGSPTEDYWP-VS 347 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH------HHHHHHHHHHhCCCChhccc-cc
Confidence 2 34559999999875 699999999999999999999999976433 222333321 11111 00
Q ss_pred chh---hhcc-c----C----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 597 DLE---LLRY-Q----N----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 597 d~~---~~~~-~----~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+.. .... . . ........++|+..++..||.+|.|+.++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 110 0000 0 0 1112345677888999999999999999987
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=339.35 Aligned_cols=239 Identities=23% Similarity=0.350 Sum_probs=199.7
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
++.||+|+|++||+|. ..+++.||||++.+... -.+.+..|-+.|.+| .||.|++|+-.|.+...+|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 5789999999999999 66799999999876522 234577888889999 89999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.++++..+ .+++...+.++.+|+.||+|||++| ||||||||+|||+|+|+++||.|||.|+.+.+..
T Consensus 158 nGdll~~i~K~G-----sfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 158 NGDLLDLIKKYG-----SFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred CCcHHHHHHHhC-----cchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 999999998764 4899999999999999999999999 9999999999999999999999999998765421
Q ss_pred ---------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc
Q 006055 527 ---------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW 591 (663)
Q Consensus 527 ---------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 591 (663)
+..||..|.+||++.....+..+|+|+|||++|.|+.|++||.+.. -....+.++.-.+
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyliFqkI~~l~y 304 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLIFQKIQALDY 304 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHHHHHHHHhcc
Confidence 1236777999999999999999999999999999999999997532 2223333332221
Q ss_pred cccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 592 TSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
..++..+....+|+.+.+..||.+|+|.+|+.+|-
T Consensus 305 ------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 305 ------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred ------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 11222234566777799999999999999998875
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.7e-39 Score=342.42 Aligned_cols=252 Identities=25% Similarity=0.399 Sum_probs=197.2
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecC-ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMD-EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv~ 444 (663)
.++||+|+||.||+|.. .+++.||||+++.... ....+.+|+.++..+ +||||++++++|...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 57899999999999973 2357899999875422 235688999999999 8999999999987654 478999
Q ss_pred EccCCCChhHhhccCCCC---------------------------------------------------------CCCCC
Q 006055 445 DYLTMGSLSALLHGNKGA---------------------------------------------------------GRTPL 467 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~---------------------------------------------------------~~~~l 467 (663)
||+++|+|.++++..... ...++
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 999999999998753210 12358
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC------CCCCCccccCccccC
Q 006055 468 NWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS------TPNRVAGYRAPEVTD 541 (663)
Q Consensus 468 ~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~ 541 (663)
++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 249 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIF 249 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhh
Confidence 88999999999999999999998 9999999999999999999999999998653321 122345699999999
Q ss_pred CCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHc
Q 006055 542 PCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDC 620 (663)
Q Consensus 542 ~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C 620 (663)
+..++.++|||||||++|||++ |..||...... ..+...+...... ..+.....++.+++.+|
T Consensus 250 ~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~------~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~c 313 (338)
T cd05102 250 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN------EEFCQRLKDGTRM----------RAPENATPEIYRIMLAC 313 (338)
T ss_pred cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHHhcCCCC----------CCCCCCCHHHHHHHHHH
Confidence 8889999999999999999997 99999653211 1111112111110 01112334688899999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 621 SAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 621 ~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
|..||++|||+.|+++.|+++...
T Consensus 314 l~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 314 WQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred ccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999987653
No 21
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=337.87 Aligned_cols=250 Identities=29% Similarity=0.417 Sum_probs=201.5
Q ss_pred hhcccccccceEEEEEEecCCcEEEEEEecCcccCH---HHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 374 SAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISE---REFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
..+.||+|+||+||+|.|. -.||||.++.....+ +.|+.|+..+++-+|.||+-+.|||..+.. .+|+.+|++-
T Consensus 396 l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGs 472 (678)
T KOG0193|consen 396 LGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGS 472 (678)
T ss_pred ccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCc
Confidence 3689999999999999985 358999998765443 679999999999999999999999998877 9999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----- 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----- 525 (663)
+|+.++|..+ ..++......||.|||+|+.|||.++ |||||||+.||++.+++.|||+|||++..-..-
T Consensus 473 SLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 473 SLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred hhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 9999999654 56899999999999999999999998 999999999999999999999999999654321
Q ss_pred -CCCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 526 -STPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
....+...|||||++.. ..|++.+||||||+|+|||++|..||.. ...+.. ++.-+...-..|..
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqI--------ifmVGrG~l~pd~s-- 615 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQI--------IFMVGRGYLMPDLS-- 615 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhhe--------EEEecccccCccch--
Confidence 12234456999999864 3589999999999999999999999973 222100 00000100111111
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.....+.+++.+|+..||..++++||.+.+|+..|+++....
T Consensus 616 --~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 616 --KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred --hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 122345668888889999999999999999999999987744
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-39 Score=305.70 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=200.6
Q ss_pred hhcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 374 SAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
..++||+|.||.||+|. .++|+.||||+++..+.. .....+|++.++.++|+||+.++++|...+...+|+|||+.
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t 85 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT 85 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc
Confidence 35789999999999999 678999999999866433 45678999999999999999999999999999999999987
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC-
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP- 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~- 528 (663)
+|+.+++... ..+.-.....++.++.+|++|||.+. |+||||||.|+|++.+|.+||+|||+|+..++....
T Consensus 86 -dLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 86 -DLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred -cHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 9999998643 46888999999999999999999998 999999999999999999999999999998765332
Q ss_pred ---CCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh-------hcccc--cc
Q 006055 529 ---NRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK-------DEWTS--EV 595 (663)
Q Consensus 529 ---~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~ 595 (663)
..|..|.|||.+.| +.|+..+||||.||++.||+-|.+-|.+..+ .+.+..+++ +.|++ ..
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD------idQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD------IDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch------HHHHHHHHHHcCCCCcccCcccccc
Confidence 24566999999876 4689999999999999999999887765432 222222222 11111 11
Q ss_pred cchhhhc-cc------ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLR-YQ------NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~-~~------~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.|..... .+ -......+.++++..++..||.+|+|+.|++++
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111101 11 112334567899999999999999999999985
No 23
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=349.81 Aligned_cols=247 Identities=24% Similarity=0.469 Sum_probs=211.2
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||.|-||+||+|.++- ...||||.++... ....+|..|..+|+++.||||++|.|+.+..+..++|+|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 5799999999999999542 3569999999763 335789999999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+|+|+.+|+.+.+ .+.+.+..-+..+||.|+.||-+++ ++||||.++|||++.+..+|++|||+++...++...
T Consensus 714 NGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 714 NGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred CCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 9999999997653 4899999999999999999999998 999999999999999999999999999988655422
Q ss_pred -CCC------ccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 529 -NRV------AGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 529 -~~~------~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..+ ..|.|||.+..++++..+||||||+||||.++ |..||..+.+.+ .++. +.+++
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd------VIka-Ie~gy--------- 851 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD------VIKA-IEQGY--------- 851 (996)
T ss_pred cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH------HHHH-HHhcc---------
Confidence 122 34999999999999999999999999999988 999998766533 1111 11211
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+.+.+.+++..|.+|++.||++|-.+||++.|++.+|..+.-+
T Consensus 852 -RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 852 -RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred -CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 3345667888999999999999999999999999999887544
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-39 Score=333.97 Aligned_cols=238 Identities=24% Similarity=0.390 Sum_probs=205.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCH---HHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISE---REFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||||+ ..+.+.||+|.+.+....+ +.+.+|+++++.++|||||.++++|+...+.++|+||+.+
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g- 85 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG- 85 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-
Confidence 4679999999999999 5678999999997765444 4588999999999999999999999999999999999987
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|..++.... .++++.+..|+.++..||.|||+.+ |+|||+||.|||++..+.+|+||||+|+.+.....
T Consensus 86 ~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 86 DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 9999998543 5899999999999999999999998 99999999999999999999999999998877543
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..||+-|||||...+..|+..+|+||+||++||+.+|++||... .+...++.+..+.. ..+
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~d~v------------~~p 220 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILKDPV------------KPP 220 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhcCCC------------CCc
Confidence 35888899999999999999999999999999999999999752 23444444443321 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
......+..++...+.+||.+|.|..+++.|=
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 34556778888899999999999999998764
No 25
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=334.76 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=206.3
Q ss_pred hhcccccccceEEEEEEecCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 374 SAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
..++||+|-||+|.+++...+.+||||+++.. ....++|.+|+++|.+++||||++++|+|..++..++|+|||++|+
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 37899999999999999988899999999865 3345899999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCCC-
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNR- 530 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~- 530 (663)
|.+++...... .+.-..-.+|+.|||.|++||.+.. ++||||.++|+|+|.++++||+|||+++-+-..+....
T Consensus 622 LnqFl~aheap---t~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq 696 (807)
T KOG1094|consen 622 LNQFLSAHELP---TAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ 696 (807)
T ss_pred HHHHHHhccCc---ccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence 99999865321 1345566779999999999999997 99999999999999999999999999986654443322
Q ss_pred -----CccccCccccCCCCCCCcchhhhHHHHHHHHHh--CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 531 -----VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT--GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 531 -----~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...|||||.+..++++.++|||+||+++||+++ ...||....++. .++-........... .+ .
T Consensus 697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~-~~------l 766 (807)
T KOG1094|consen 697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQ-VV------L 766 (807)
T ss_pred cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcc-ee------c
Confidence 256999999999999999999999999999887 788997655432 111111111111111 00 1
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
..+.-++..+.+++.+||..+.++||+++++...|.+..
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 123446678899999999999999999999999998753
No 26
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=362.16 Aligned_cols=259 Identities=26% Similarity=0.403 Sum_probs=211.4
Q ss_pred hcccccccceEEEEEEec--CCc----EEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE--MGT----IVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--~g~----~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
...||+|.||.||.|... +|. .||||.++.. .....+|.+|..+|+.++|||||+++|+|.+....++++||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley 776 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY 776 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence 468999999999999944 343 4999999876 44567899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 447 LTMGSLSALLHGNKG--AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
|++|+|..+|+..+. .+...+.....+.++.|||+|+.||++++ +|||||..+|+||+....+||+|||+|+..-.
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~ 854 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDERRVVKIADFGLARDIYD 854 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecccCcEEEcccchhHhhhh
Confidence 999999999987532 22456899999999999999999999997 99999999999999999999999999995433
Q ss_pred CCCC-C-----CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 525 SSTP-N-----RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 525 ~~~~-~-----~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
.+.+ . -...|||||.+..+.++.|+|||||||++||++| |..||....+.+ .+..+...+
T Consensus 855 ~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~~~~~gg------- 921 (1025)
T KOG1095|consen 855 KDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLLDVLEGG------- 921 (1025)
T ss_pred chheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHHHHHhCC-------
Confidence 2221 1 1245999999999999999999999999999999 888987644322 111222222
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCC
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGL 652 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~ 652 (663)
+.+.+..++..+.++|.+||+.+|++||++..+++.+..+...........
T Consensus 922 ----RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~ 972 (1025)
T KOG1095|consen 922 ----RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGP 972 (1025)
T ss_pred ----ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcccc
Confidence 223455677789999999999999999999999999988766654433333
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=340.18 Aligned_cols=239 Identities=24% Similarity=0.360 Sum_probs=204.5
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc-cc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV-TI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++.||.|+.|.|-.|+ ..+|+.+|||++.+. +. ....+.+|+-+|+.++|||++++++.|++..++|+|.||+++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 5679999999999999 578999999999765 22 246789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|.|++++-..+ ++++....+.+.||+.|+.|+|..+ |+||||||+|+|+|..+.+||+|||+|..-.++..
T Consensus 97 GELFdylv~kG-----~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 97 GELFDYLVRKG-----PLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred chhHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence 99999987644 5888999999999999999999998 99999999999999999999999999988776643
Q ss_pred -CCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 528 -PNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
..|.+.|.|||++++..| +.++||||.|||||.|+||+.||++ .++...+..+.+.. ++.
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD------dNir~LLlKV~~G~------------f~M 231 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD------DNIRVLLLKVQRGV------------FEM 231 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC------ccHHHHHHHHHcCc------------ccC
Confidence 345566999999999887 5689999999999999999999974 34444444444432 223
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+.....+..+|+.+|+..||++|.|++||.+|-
T Consensus 232 Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 232 PSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred CCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 344455778888899999999999999999964
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-40 Score=335.53 Aligned_cols=239 Identities=26% Similarity=0.427 Sum_probs=200.6
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhHh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSAL 455 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~ 455 (663)
+-||.|+.|-||+|+++ ++.||||+++.-+ ..+|+-|++|+|+||+.+.|+|....-+++|||||..|-|..+
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 56999999999999988 7899999875422 3467789999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---CCCCc
Q 006055 456 LHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---PNRVA 532 (663)
Q Consensus 456 l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---~~~~~ 532 (663)
|+.. .++.-.....+..+||.|+.|||.+. |||||||+-||||..+..+||+|||-++......+ ..+|.
T Consensus 203 Lka~-----~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTV 275 (904)
T KOG4721|consen 203 LKAG-----RPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTV 275 (904)
T ss_pred Hhcc-----CccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhH
Confidence 9864 35788888899999999999999997 99999999999999999999999999988766543 34778
Q ss_pred cccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHH
Q 006055 533 GYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQ 612 (663)
Q Consensus 533 ~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 612 (663)
.|||||++....+++|+||||||||||||+||..||....... ++.. +....+..+.++.++..
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----------IIwG------VGsNsL~LpvPstcP~G 339 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----------IIWG------VGSNSLHLPVPSTCPDG 339 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----------eEEe------ccCCcccccCcccCchH
Confidence 8999999999999999999999999999999999996432110 0100 01111223445677778
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 613 LLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 613 l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+.-|+++||...|..||++.+++.||+-..+.
T Consensus 340 fklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 340 FKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred HHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 88889999999999999999999999866543
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=340.23 Aligned_cols=250 Identities=30% Similarity=0.433 Sum_probs=205.1
Q ss_pred hcccccccceEEEEEEecC--C--cE-EEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM--G--TI-VAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.++||+|+||.||+|.++. + .. ||||..+.. ....++|.+|.++|+.++|||||+++|++...+..++|||
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE 241 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME 241 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence 3789999999999999543 2 23 899998852 2235789999999999999999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
+|.||+|.++|+..++ .++..++.+++.++|.||+|||+++ +|||||-++|+|++.++.+||+|||+++.-...
T Consensus 242 l~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~ 315 (474)
T KOG0194|consen 242 LCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY 315 (474)
T ss_pred ecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCCCeEEeCccccccCCcce
Confidence 9999999999997653 5899999999999999999999998 999999999999999999999999998765422
Q ss_pred CCC----CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 526 STP----NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 526 ~~~----~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
... .-...|+|||.+....++.++|||||||++||+.+ |..||.+.. ..+....+..+++...
T Consensus 316 ~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~------~~~v~~kI~~~~~r~~------ 383 (474)
T KOG0194|consen 316 VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK------NYEVKAKIVKNGYRMP------ 383 (474)
T ss_pred eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC------HHHHHHHHHhcCccCC------
Confidence 111 12356999999999999999999999999999999 888986543 2233333334333221
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.+...+.++..++.+||..+|++||+|.++.+.++.+.....
T Consensus 384 ----~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 384 ----IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 122344567778889999999999999999999999866644
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=333.92 Aligned_cols=237 Identities=25% Similarity=0.357 Sum_probs=197.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc-----c-cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV-----T-ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-----~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.|+.|. ..+|+.||+|.+... . ...+.+.+|+.+++.++ ||||+++++++......++||||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy 101 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY 101 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence 4679999999999998 567899999976553 1 12456778999999999 99999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccC-C
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVG-P 524 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~-~ 524 (663)
+.+|+|.+++.... .+.+....+++.|++.|++|||+++ |+||||||+|||+|.+ +++||+|||++.... .
T Consensus 102 ~~gGdL~~~i~~~g-----~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~ 174 (370)
T KOG0583|consen 102 CSGGDLFDYIVNKG-----RLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE 174 (370)
T ss_pred cCCccHHHHHHHcC-----CCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence 99999999998622 4788999999999999999999999 9999999999999999 999999999999883 3
Q ss_pred C---CCCCCCccccCccccCCCC-CC-CcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 525 S---STPNRVAGYRAPEVTDPCK-VS-QKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 525 ~---~~~~~~~~y~aPE~~~~~~-~~-~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
. .+..|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+. .+.......+.....
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d------~~~~~l~~ki~~~~~-------- 240 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD------SNVPNLYRKIRKGEF-------- 240 (370)
T ss_pred CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC------ccHHHHHHHHhcCCc--------
Confidence 2 3456788899999999877 75 789999999999999999999976 233333333332221
Q ss_pred hhcccChHHH-HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 600 LLRYQNVEEE-MVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 600 ~~~~~~~~~~-~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
..+... ..++..++.+|+..||.+|+|+.|+++
T Consensus 241 ----~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 ----KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred ----cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 111111 457788888999999999999999994
No 31
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=346.36 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=203.2
Q ss_pred hcccccccceEEEEEEecCC-cEEEEEEecCc-ccCHHHHHHHHHHhhcCC-CCCcccceE-EEEe------cCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEMG-TIVAVKRLKDV-TISEREFKDKIEGVGAVN-HENLVPLRA-YYYS------MDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~------~~~~~lv~ 444 (663)
.++|.+|||+.||.|....+ ..||+|++-.. +..-+.+.+|+++|+.|+ |+|||.+++ .... .-+.+|.|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 57899999999999996555 99999998655 334577899999999996 999999999 3321 23578999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
|||.+|+|-+++.... ...|++.++++|+.++|+|+++||...|||||||||-+||||+.++..||||||.|.....
T Consensus 122 EyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~ 198 (738)
T KOG1989|consen 122 EYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL 198 (738)
T ss_pred hhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence 9999999999997543 2349999999999999999999999999999999999999999999999999999965433
Q ss_pred CC-------------CCCCCccccCcccc---CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh
Q 006055 525 SS-------------TPNRVAGYRAPEVT---DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 525 ~~-------------~~~~~~~y~aPE~~---~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
.. ....|+.|+|||.+ .+..+++|+|||+|||+||-|+....||+....
T Consensus 199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------------- 263 (738)
T KOG1989|consen 199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------------- 263 (738)
T ss_pred CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------------
Confidence 22 12357779999987 466789999999999999999999999975311
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
..+++-.+ .++....+...+.+||..||+.||++||++-+|++.+.++....
T Consensus 264 ----laIlng~Y-~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 ----LAILNGNY-SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ----eeEEeccc-cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 11222111 22333567888999999999999999999999999999886554
No 32
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-39 Score=305.55 Aligned_cols=237 Identities=22% Similarity=0.290 Sum_probs=195.5
Q ss_pred cCHHHHHHHhhcccccccceEEEEEE-ecCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCc
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDE 439 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 439 (663)
+.+++.. +...||.|+||+|.+++ ..+|..+|+|++.....- .+...+|..+++.+.||.++++++.|.+...
T Consensus 41 ~~l~dfe--~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 41 YSLQDFE--RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred cchhhhh--heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 5666663 35789999999999999 456899999999765322 3457789999999999999999999999999
Q ss_pred cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 440 KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 440 ~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
.++||||+++|.|.++++... .+++.+++.+|.+|+.||+|||+.+ |++|||||+|||+|.+|.+||.|||+|
T Consensus 119 lymvmeyv~GGElFS~Lrk~~-----rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~G~iKitDFGFA 191 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSG-----RFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQNGHIKITDFGFA 191 (355)
T ss_pred EEEEEeccCCccHHHHHHhcC-----CCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccCCcEEEEeccce
Confidence 999999999999999998644 5899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCC-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 520 HLVGPSS-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 520 ~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
+.+.... +..||+.|+|||++.+..+...+|.|||||++|||+.|.+||..... ......++....
T Consensus 192 K~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~------~~iY~KI~~~~v------- 258 (355)
T KOG0616|consen 192 KRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP------IQIYEKILEGKV------- 258 (355)
T ss_pred EEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh------HHHHHHHHhCcc-------
Confidence 9886653 34589999999999999999999999999999999999999976432 334444443321
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNR 628 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R 628 (663)
..+.....++.+++...++.|-.+|
T Consensus 259 -----~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 -----KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 1122222345566667777777777
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7e-39 Score=298.00 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=204.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecC-----ccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-----EKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ey~ 447 (663)
.+.||+|||+-||.++ ..++..+|+|++.... .+.+..++|++..++++|||+++++++...+. +.|++++|.
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy 105 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYY 105 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehh
Confidence 4679999999999999 7789999999998764 45678899999999999999999999875433 489999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-- 525 (663)
..|+|.+.+...... ...+++...+.|+.+|++||.+||+..|+++||||||.|||+.+++.+++.|||.++...-.
T Consensus 106 ~~Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~ 184 (302)
T KOG2345|consen 106 KRGSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIE 184 (302)
T ss_pred ccccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEee
Confidence 999999998765432 34689999999999999999999999999999999999999999999999999998765321
Q ss_pred -----------CCCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc
Q 006055 526 -----------STPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW 591 (663)
Q Consensus 526 -----------~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 591 (663)
.....|.-|.|||.+.- ...++++|||||||++|+|+.|..||+.... .|..+.-
T Consensus 185 ~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~GgSlaL---------- 253 (302)
T KOG2345|consen 185 GSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-QGGSLAL---------- 253 (302)
T ss_pred chHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-cCCeEEE----------
Confidence 11234666999999854 4678999999999999999999999986544 2222111
Q ss_pred cccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 592 TSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.+....+ ..+........+.+++..|++.||.+||++.+++.++..+.
T Consensus 254 --Av~n~q~-s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 --AVQNAQI-SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred --eeecccc-ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111111 12222236678889999999999999999999999988763
No 34
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.3e-38 Score=326.02 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEecC-----------------CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM-----------------GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYY 435 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~ 435 (663)
.++||+|+||.||++.+++ +..||+|.+..... ...++.+|++++.+++||||+++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 4679999999999997532 34799999875422 2457899999999999999999999999
Q ss_pred ecCccEEEEEccCCCChhHhhccCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCC
Q 006055 436 SMDEKLLVYDYLTMGSLSALLHGNKG--------------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSS 501 (663)
Q Consensus 436 ~~~~~~lv~ey~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~ 501 (663)
+.+..++||||+++|+|.+++..... .....++|....+++.||+.||.|||+.+ |+||||||+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--ivH~dlkp~ 167 (304)
T cd05096 90 DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--FVHRDLATR 167 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--ccccCcchh
Confidence 99999999999999999999864321 11235788999999999999999999998 999999999
Q ss_pred CEEEcCCCceEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh--CCCCCccccC
Q 006055 502 NILLTKSYEARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT--GKAPTHALLN 573 (663)
Q Consensus 502 Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt--g~~p~~~~~~ 573 (663)
|||++.++.+||+|||+++....... ...+..|+|||++.+..++.++||||||+++|||++ +..||.....
T Consensus 168 Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 247 (304)
T cd05096 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD 247 (304)
T ss_pred heEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH
Confidence 99999999999999999986543321 223556999999988889999999999999999987 5567764321
Q ss_pred CCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 574 EEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
. .....+.......... .. ...+...+..+.+++.+||..||++|||++||.+.|++
T Consensus 248 ~---~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 248 E---QVIENAGEFFRDQGRQ-VY------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred H---HHHHHHHHHhhhcccc-cc------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 1 1122222211111000 00 00112234578899999999999999999999998864
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=324.44 Aligned_cols=238 Identities=25% Similarity=0.389 Sum_probs=197.6
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
++||+|.||.||+|. .++++.||+|++.... ....++++|+.++..++++||.++++.|..+...+++|||+.+|++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 579999999999999 6789999999987653 3356899999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
.+.+.... .+++.....|..++..|+.|||.++ .+|||||+.|||+..+|.+|++|||.+..+... .+.
T Consensus 99 ~~lL~~~~-----~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 99 LDLLKSGN-----ILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred hhhhccCC-----CCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 99998644 3467777778889999999999998 999999999999999999999999999776543 445
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+|+.|||||++....|+.|+||||||++.+||.+|.+|+.........-+ +.+. .-|. ....
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------Ipk~-----~PP~-----L~~~ 234 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------IPKS-----APPR-----LDGD 234 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------ccCC-----CCCc-----cccc
Confidence 688899999999998999999999999999999999999865432110000 0000 0000 1114
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++..|+.+||+.||++.+++++
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 45568888889999999999999999875
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-38 Score=294.50 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=206.2
Q ss_pred cccCHHHHHHHhhcccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEec
Q 006055 363 RVFDLEDLLRASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSM 437 (663)
Q Consensus 363 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 437 (663)
..++++++ ..++.||+|-||.||.|. .+++-.||+|++.+.. ..+.++.+|+++-+.|+||||++++++|.+.
T Consensus 17 ~~~~l~df--eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 17 KTWTLDDF--EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccchhhc--cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 34666666 447899999999999999 5678899999997653 2367899999999999999999999999999
Q ss_pred CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 438 DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 438 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
...||++||...|+++..|+... ...+++.....+..|+|.|+.|+|..+ ||||||||+|+|++.++..||+|||
T Consensus 95 ~riyLilEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCCCCeeccCCC
Confidence 99999999999999999998544 235778888889999999999999987 9999999999999999999999999
Q ss_pred cccccCCC--CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 518 LAHLVGPS--STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 518 ~a~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
.+...... .+..+|..|.+||...+..++..+|+|++|++.||++.|.+||.....+ +..+.+.+.. .
T Consensus 170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~------etYkrI~k~~----~ 239 (281)
T KOG0580|consen 170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS------ETYKRIRKVD----L 239 (281)
T ss_pred ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH------HHHHHHHHcc----c
Confidence 98665422 3345777799999999999999999999999999999999999764421 1122222111 1
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+ ++....+..+++.+|+..+|.+|.+..|++++
T Consensus 240 ~~--------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 KF--------PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cC--------CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 11 12233466788889999999999999999985
No 37
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.9e-38 Score=333.09 Aligned_cols=249 Identities=24% Similarity=0.417 Sum_probs=197.0
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.++||+|+||.||+|.. .++..||||+++.... ..+.+.+|+.++..+ +||||++++++|.+....++|||
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 67899999999999963 2466899999875432 245688999999999 89999999999999999999999
Q ss_pred ccCCCChhHhhccCCCC---------------------------------------------------------------
Q 006055 446 YLTMGSLSALLHGNKGA--------------------------------------------------------------- 462 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~--------------------------------------------------------------- 462 (663)
|+++|+|.++++.....
T Consensus 120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
T cd05104 120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV 199 (375)
T ss_pred hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence 99999999998653210
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------CC
Q 006055 463 -------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------PN 529 (663)
Q Consensus 463 -------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~ 529 (663)
....++|..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++....... ..
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 277 (375)
T cd05104 200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNAR 277 (375)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCC
Confidence 1125789999999999999999999998 99999999999999999999999999986643321 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+..|+|||.+.+..++.++|||||||++|||++ |..||....... .. ...+....... .+..
T Consensus 278 ~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-----~~-~~~~~~~~~~~----------~~~~ 341 (375)
T cd05104 278 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-----KF-YKMIKEGYRML----------SPEC 341 (375)
T ss_pred CCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-----HH-HHHHHhCccCC----------CCCC
Confidence 2346999999999899999999999999999998 888886532111 11 11122211100 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
...++.+++.+|+..||++||++.||+++|++.
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 234688999999999999999999999999864
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4e-38 Score=329.64 Aligned_cols=237 Identities=22% Similarity=0.289 Sum_probs=192.8
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
++||+|+||.||++.. .+|+.||+|.++.... ....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999984 5789999999875421 2245778999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----S 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~ 526 (663)
+|.+++.... .+++.....++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 81 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 81 ELFFHLSRER-----VFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 9999987532 5889999999999999999999998 999999999999999999999999998754222 1
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~~~~~~~------------~~p 215 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEI------------RFP 215 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC------HHHHHHHHHcCCC------------CCC
Confidence 2346778999999999899999999999999999999999996421 1122222211110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.....++.+++.+|+..||++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 12334677888899999999999 79998864
No 39
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.6e-37 Score=312.43 Aligned_cols=241 Identities=25% Similarity=0.385 Sum_probs=199.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||++.++++..+|+|.++........+.+|+++++.++||||+++++++......++||||+++|+|.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 88 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence 36799999999999998888899999988666667889999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ..+++..+..++.+++.||.|||+.+ |+||||||+||++++++.+||+|||.++....... ..
T Consensus 89 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05114 89 YLRQRQ----GKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK 162 (256)
T ss_pred HHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCC
Confidence 997533 24889999999999999999999998 99999999999999999999999999876543221 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++.+..++.++||||||+++|||++ |+.||.... ....+..+....... . +..
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~i~~~~~~~---~--------~~~ 225 (256)
T cd05114 163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEMISRGFRLY---R--------PKL 225 (256)
T ss_pred CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHCCCCCC---C--------CCC
Confidence 2346999999988889999999999999999999 899986432 222233322221110 0 111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
...++.+++.+||..+|++||+++|+++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 234678999999999999999999999876
No 40
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-38 Score=320.60 Aligned_cols=242 Identities=32% Similarity=0.534 Sum_probs=190.1
Q ss_pred hcccccccceEEEEEEec-----CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-----MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||.|.||.||+|.+. .+..|+||.++.... ..+.+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 367999999999999976 367899999965422 2578999999999999999999999999888899999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++|+|.++++... ...+++..+..|+.|||+||.|||+.+ ++|+||+++||+++.++.+||+|||+++......
T Consensus 84 ~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 9999999998752 345899999999999999999999998 9999999999999999999999999998773221
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 -----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 -----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
.......|+|||.+....++.++||||||+++|||++ |+.||... +.......+..... .
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~~~~~~~~~~-~------- 224 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEIIEKLKQGQR-L------- 224 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHHHHHHHTTEE-T-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccc-c-------
Confidence 1224456999999988889999999999999999999 77887543 22233333322211 1
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.........+.+++..||+.+|++||+++++++.|
T Consensus 225 ---~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 ---PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11122344688899999999999999999999876
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.5e-37 Score=314.60 Aligned_cols=244 Identities=22% Similarity=0.378 Sum_probs=196.6
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.+. .+..||+|.++..... ...+.+|+.++..++||||+++++++...+..++||||++
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence 467999999999999743 4678999998765322 3568899999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+........
T Consensus 90 ~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 90 NGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 999999997532 35899999999999999999999998 99999999999999999999999998765432211
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
...+..|+|||.+.+..++.++|||||||++||+++ |+.||..... ...+..+ .+...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~------~~~~~~~-~~~~~---------- 226 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG------QDVIKAV-EDGFR---------- 226 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHH-HCCCC----------
Confidence 123456999999998899999999999999999775 9999965321 1222222 11110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
...+...+..+.+++.+||..+|++||+++|+.+.|.++
T Consensus 227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011223445688899999999999999999999998765
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-37 Score=320.55 Aligned_cols=244 Identities=23% Similarity=0.271 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++. ..+|+.||||.+.... .....+.+|+.++..++|+|++++++++.+.+..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 3679999999999998 4679999999986542 2234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 85 g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 85 GDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred CcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 99998876432 235899999999999999999999998 9999999999999999999999999998754332
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+........ ....
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~-----------~~~~ 225 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV---KREEVDRRVKEDQ-----------EEYS 225 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch---hHHHHHHHhhccc-----------ccCC
Confidence 2346778999999999999999999999999999999999997543211 1111111111100 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
.....++.+++.+|+..||++||+ ++|++++
T Consensus 226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 123346778899999999999997 8888875
No 43
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.3e-37 Score=313.10 Aligned_cols=245 Identities=28% Similarity=0.425 Sum_probs=201.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|.. ++++.||+|.++.......++.+|+++++.++|+||+++++++......++||||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHH
Confidence 46799999999999994 46899999998866555678899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----P 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~ 528 (663)
+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........ .
T Consensus 91 ~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~ 165 (263)
T cd05052 91 DYLRECN---RQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 165 (263)
T ss_pred HHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCC
Confidence 9987533 245899999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..+..|+|||++.+..++.++|||||||++|||++ |..||... +.......... ... ...+.
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~-~~~----------~~~~~ 228 (263)
T cd05052 166 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK-GYR----------MERPE 228 (263)
T ss_pred CCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHC-CCC----------CCCCC
Confidence 12456999999998889999999999999999998 89998642 22222222211 110 01112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..+.++.+++.+|+..+|++||++.+++++|+++
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 2345688899999999999999999999999875
No 44
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=311.33 Aligned_cols=238 Identities=24% Similarity=0.375 Sum_probs=202.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|.||.|-+|. ...|+.||||.+++.... --.+.+|+++|..++||||+.++++|.+.+...+||||..+
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~ 137 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG 137 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence 5679999999999998 578999999999876433 24588999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|.|++++.... .+++.....++.||..|+.|+|.++ ++|||||-+|||+|.++++||+|||++..+....
T Consensus 138 GeLYDYiSer~-----~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 138 GELYDYISERG-----SLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred ccHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCCCCeeeeccchhhhhccccHHH
Confidence 99999998644 5899999999999999999999998 9999999999999999999999999998887654
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
+..+++-|.+||++++..| +..+|.||+||+||-|+.|..||++ .+....++++-...+.+ ..
T Consensus 211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG------~Dhk~lvrQIs~GaYrE---------P~- 274 (668)
T KOG0611|consen 211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG------RDHKRLVRQISRGAYRE---------PE- 274 (668)
T ss_pred HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC------chHHHHHHHhhcccccC---------CC-
Confidence 3446666999999999887 5679999999999999999999965 44555666655544311 11
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.+.+.--+|++|+..+|++|.|+++|..|-
T Consensus 275 ---~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 275 ---TPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ---CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 122445677899999999999999999875
No 45
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.8e-37 Score=311.51 Aligned_cols=245 Identities=27% Similarity=0.425 Sum_probs=202.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|++|.||+|...+++.||+|.++......+++.+|+.++++++|+|++++++++...+..++||||+++++|.+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLE 90 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHH
Confidence 46899999999999998778899999998766667889999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--CCC--
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--PNR-- 530 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~-- 530 (663)
++.... ...+++..+..++.+++.|+.|||+.+ |+||||||+||++++++.+||+|||+++....... ..+
T Consensus 91 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 165 (261)
T cd05068 91 YLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAK 165 (261)
T ss_pred HHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCc
Confidence 997543 235899999999999999999999998 99999999999999999999999999987653321 111
Q ss_pred -CccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 531 -VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 531 -~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
...|+|||++.+..++.++||||||++++||++ |+.||.... .......+. .... ......
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~-~~~~----------~~~~~~ 228 (261)
T cd05068 166 FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT------NAEVLQQVD-QGYR----------MPCPPG 228 (261)
T ss_pred CceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH-cCCC----------CCCCCc
Confidence 236999999998889999999999999999999 999986432 111111111 1110 011122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
....+.+++.+|+..+|++||+++++++.|+++
T Consensus 229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 229 CPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 345788899999999999999999999999864
No 46
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.2e-37 Score=316.62 Aligned_cols=248 Identities=27% Similarity=0.432 Sum_probs=198.7
Q ss_pred hcccccccceEEEEEEecC------CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLEM------GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.... ...||+|.++.... ....+.+|+..+..++||||+++++++......+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 5789999999999998532 25799999875432 245688999999999999999999999988899999999
Q ss_pred cCCCChhHhhccCCCCCC-----------CCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEec
Q 006055 447 LTMGSLSALLHGNKGAGR-----------TPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSD 515 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~D 515 (663)
+++|+|.+++........ ..+++.....++.|++.||.|||+.+ ++||||||+||++++++.+||+|
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~~~~~~L~d 167 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGEGLTVKISD 167 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcCCCcEEECC
Confidence 999999999975432111 45889999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHh
Q 006055 516 FGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 516 fg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+.
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------~~~~~~i~- 240 (283)
T cd05048 168 FGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------QEVIEMIR- 240 (283)
T ss_pred CcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHH-
Confidence 99997653322 1223456999999988889999999999999999998 9999865322 11222211
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..... ..+...+.++.+++.+||+.||++||++.||+++|+.+
T Consensus 241 ~~~~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 241 SRQLL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred cCCcC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11111 11233456788999999999999999999999999753
No 47
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.8e-37 Score=311.46 Aligned_cols=245 Identities=24% Similarity=0.422 Sum_probs=201.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.++||+|+||.||+|...++..||+|.+.......+.+.+|+.+++.++|+||+++++++.+.+..++||||+++|+|.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD 90 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence 46899999999999998888999999987665566789999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ...+++..+..++.+++.||+|||+.+ ++||||||+||++++++.++|+|||+++....... ..
T Consensus 91 ~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 165 (261)
T cd05072 91 FLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 165 (261)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCc
Confidence 997543 235788999999999999999999998 99999999999999999999999999987654221 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+ ...... +....
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~-~~~~~~----------~~~~~ 228 (261)
T cd05072 166 FPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN------SDVMSAL-QRGYRM----------PRMEN 228 (261)
T ss_pred cceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH------HHHHHHH-HcCCCC----------CCCCC
Confidence 3456999999988888999999999999999998 9999864321 1111111 111110 11112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
...++.+++.+|+..+|++||+++++.+.|+++
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 229 CPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 334678899999999999999999999999864
No 48
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=319.63 Aligned_cols=241 Identities=24% Similarity=0.326 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
..+||+|+||+||+|+ ..+|..+|+|++++...- .+.+..|..+|....+|.||+++-.|.+.+.+||||||++|
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPG 225 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPG 225 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCC
Confidence 4789999999999999 557999999999877432 35688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC-----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----- 524 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----- 524 (663)
|++..+|.... .+++......+.+++.|++-+|+.| +|||||||+|+|||..|++||+|||++.....
T Consensus 226 GD~mTLL~~~~-----~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 226 GDMMTLLMRKD-----TLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred ccHHHHHHhcC-----cCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 99999998643 6889999999999999999999999 99999999999999999999999999842100
Q ss_pred -----------------C--C---------------------------CCCCCccccCccccCCCCCCCcchhhhHHHHH
Q 006055 525 -----------------S--S---------------------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLL 558 (663)
Q Consensus 525 -----------------~--~---------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl 558 (663)
. . +..||+.|||||++.+..|+..+|+||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 0 0 01256669999999999999999999999999
Q ss_pred HHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 006055 559 LELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS---MSEVI 635 (663)
Q Consensus 559 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt---~~ev~ 635 (663)
|||+.|.+||...... ...+.+..-.. -+.++...+...+..++|.+|+. ||++|.- ++||.
T Consensus 379 yEmLvGyPPF~s~tp~------~T~rkI~nwr~--------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQ------ETYRKIVNWRE--------TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHhCCCCCCCCCHH------HHHHHHHHHhh--------hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 9999999999864322 22222221110 00111122233566777788887 9999975 66666
Q ss_pred HH
Q 006055 636 KR 637 (663)
Q Consensus 636 ~~ 637 (663)
+|
T Consensus 444 ~H 445 (550)
T KOG0605|consen 444 KH 445 (550)
T ss_pred cC
Confidence 54
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-37 Score=331.43 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=197.1
Q ss_pred hhcccccccceEEEEEEe------cCCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 374 SAEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
..+.||+|+||.||+|.. .++..||||+++..... ...+.+|+++++.+ +|+||++++++|......++||
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ 121 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT 121 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeH
Confidence 467899999999999873 23457999999764322 34688999999999 8999999999999999999999
Q ss_pred EccCCCChhHhhccCCC---------------------------------------------------------------
Q 006055 445 DYLTMGSLSALLHGNKG--------------------------------------------------------------- 461 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~--------------------------------------------------------------- 461 (663)
||+++|+|.++++....
T Consensus 122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (374)
T cd05106 122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE 201 (374)
T ss_pred hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence 99999999999864210
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------CCCCcc
Q 006055 462 --AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------PNRVAG 533 (663)
Q Consensus 462 --~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~ 533 (663)
....++++....+++.||+.||.|||+.+ |+||||||+||++++++.+||+|||+++....... ..++..
T Consensus 202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~ 279 (374)
T cd05106 202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVK 279 (374)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccc
Confidence 01235788999999999999999999998 99999999999999999999999999976543221 122346
Q ss_pred ccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHH
Q 006055 534 YRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQ 612 (663)
Q Consensus 534 y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 612 (663)
|+|||++.+..++.++|||||||++|||++ |+.||....... ............. .+.....+
T Consensus 280 y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~~~~~~~~~----------~~~~~~~~ 343 (374)
T cd05106 280 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKMVKRGYQMS----------RPDFAPPE 343 (374)
T ss_pred eeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHHHHcccCcc----------CCCCCCHH
Confidence 999999988889999999999999999997 999997532211 1111111111000 00112346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 613 LLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 613 l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
+.+++.+||..||++|||+.+|++.|+++.
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 788899999999999999999999999863
No 50
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=307.95 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=196.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhc--CCCCCcccceEEEEec----CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGA--VNHENLVPLRAYYYSM----DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~lv~ey~~ 448 (663)
.+.||+|.||+||+|.|+ |+.||||+|...+ ++.+.+|.++++. ++|+||..+++.=..+ .+++||++|.+
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd--E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe 292 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD--ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHE 292 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEecccc--hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeeccc
Confidence 468999999999999998 9999999997543 4556666666554 6999999999874322 35799999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-----cC-CcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-----QG-PNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-----~~-~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
+|||+|+|... .++....++++..+|.||+|||. +| |.|.|||||+.|||+..++...|+|+|+|...
T Consensus 293 ~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 293 HGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred CCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 99999999853 48999999999999999999994 34 88999999999999999999999999999766
Q ss_pred CCCC--------CCCCCccccCccccCCCC------CCCcchhhhHHHHHHHHHhC----------CCCCccccCCCCCC
Q 006055 523 GPSS--------TPNRVAGYRAPEVTDPCK------VSQKADVYSFGVLLLELLTG----------KAPTHALLNEEGVD 578 (663)
Q Consensus 523 ~~~~--------~~~~~~~y~aPE~~~~~~------~~~~~Dv~slGvvl~elltg----------~~p~~~~~~~~~~~ 578 (663)
.... ...||..|||||++...- --..+||||||+|+||+.-+ +.||++....+ ..
T Consensus 367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D-Ps 445 (513)
T KOG2052|consen 367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD-PS 445 (513)
T ss_pred cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC-CC
Confidence 5442 234677899999986532 12358999999999999863 34666544332 11
Q ss_pred hHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 579 LPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
..+ ++.+ .-.+.+.|.+.+.....+.+..+.+++..||..+|..|-|+-.+.+.|.++...
T Consensus 446 ~ee-MrkV----VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 446 FEE-MRKV----VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred HHH-Hhcc----eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 111 1111 111122233334445567889999999999999999999999999999988653
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-37 Score=324.32 Aligned_cols=235 Identities=23% Similarity=0.292 Sum_probs=190.6
Q ss_pred cccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||.||++.. .+++.||+|.++... .....+.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999995 468899999986532 2235678899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 81 FHHLQREG-----RFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 99997532 4889999999999999999999998 9999999999999999999999999997643221 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||... +.......+..... ..+..
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~------~~~~~~~~~~~~~~------------~~~~~ 215 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE------NVNEMYRKILQEPL------------RFPDG 215 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC------CHHHHHHHHHcCCC------------CCCCc
Confidence 4677899999999989999999999999999999999999642 22233333332211 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPS---MSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt---~~ev~~~ 637 (663)
...++.+++.+|+..||++||+ +.|++.+
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 2345778888999999999985 5666554
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.5e-38 Score=321.98 Aligned_cols=238 Identities=20% Similarity=0.228 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+++++.++||||+++++++.+....++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 85 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG 85 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence 36799999999999995 468999999986432 1245688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
|+|.+++.... .+++.....++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 86 ~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 86 GELFSYLRNSG-----RFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 99999997532 4889999999999999999999998 9999999999999999999999999998765432 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||... +.......+..... ..+..
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~------------~~~~~ 220 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD------NPFGIYEKILAGKL------------EFPRH 220 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCc------------CCCcc
Confidence 4677899999999888999999999999999999999999643 22222333322211 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
....+.+++.+|+..||.+||+ ++|++++
T Consensus 221 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 221 LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 2335778888999999999995 8888876
No 53
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=309.42 Aligned_cols=258 Identities=26% Similarity=0.414 Sum_probs=195.0
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhh--cCCCCCcccceEEEEecC----ccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVG--AVNHENLVPLRAYYYSMD----EKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~lv~ey~~~ 449 (663)
++||+|+||.||||.+. ++.||||++... ....|..|-++++ .++|+||++++++-.... +++||+||.+.
T Consensus 216 eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 67999999999999987 699999998643 3456777777755 469999999999865444 78999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-------PNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-------~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
|+|.++|..+ .++|....+|+..+++||+|||+.- |+|+|||||+.||||..|+++.|+|||+|..+
T Consensus 293 GsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~ 366 (534)
T KOG3653|consen 293 GSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRL 366 (534)
T ss_pred CcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEe
Confidence 9999999864 4899999999999999999999632 78999999999999999999999999999887
Q ss_pred CCCCC------CCCCccccCccccCCCC-CC-----CcchhhhHHHHHHHHHhCCCCCcc--------ccCCC---CCCh
Q 006055 523 GPSST------PNRVAGYRAPEVTDPCK-VS-----QKADVYSFGVLLLELLTGKAPTHA--------LLNEE---GVDL 579 (663)
Q Consensus 523 ~~~~~------~~~~~~y~aPE~~~~~~-~~-----~~~Dv~slGvvl~elltg~~p~~~--------~~~~~---~~~~ 579 (663)
.+... ..||..|||||++.+.. .. .+.||||+|.|+|||+++...++. .++.+ ...+
T Consensus 367 ~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 367 EPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred cCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence 65432 44778899999987642 11 358999999999999997654431 11111 1122
Q ss_pred HHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 580 PRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
.+.-.-+.++..-..+.| ...-...+..+.+.+..||+.||+.|.|+.=|-+.+.++....+.
T Consensus 447 e~mq~~VV~kK~RP~~p~-----~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPD-----AWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred HHHHHHHHhhccCCCChh-----hhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 222222222222111111 111124456778888899999999999999999999988665543
No 54
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-37 Score=325.55 Aligned_cols=237 Identities=21% Similarity=0.290 Sum_probs=192.9
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||++. ..+|+.||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 369999999999998 4578999999987542 22356788999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----S 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~ 526 (663)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 81 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 81 ELFFHLSRER-----VFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 9999886532 5889999999999999999999998 999999999999999999999999998764322 1
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~------~~~~~~~~~~~~~------------~~p 215 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEDI------------KFP 215 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC------HHHHHHHhccCCc------------cCC
Confidence 2346778999999998889999999999999999999999996422 1222222211110 001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.....++.+++.+|+..||++|| ++.|++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 12234677888899999999997 89999875
No 55
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-37 Score=324.56 Aligned_cols=237 Identities=23% Similarity=0.295 Sum_probs=192.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||++.. .+|+.||+|.++... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999984 578999999987542 12345678999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|..++.... .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 81 ELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 9999886532 4889999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~~~~~~~------------~~p 215 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEEI------------RFP 215 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHhcCCC------------CCC
Confidence 2346778999999998889999999999999999999999996432 1122222221110 001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.....++.+++.+|+..||++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 12234677888899999999998 88888764
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=325.66 Aligned_cols=238 Identities=21% Similarity=0.272 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||+|.++... .....+.+|+.++..++||||+++++++.+.+..++||||+++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 102 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG 102 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence 46899999999999995 468999999987542 1235688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 103 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 175 (329)
T PTZ00263 103 GELFTHLRKAG-----RFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL 175 (329)
T ss_pred ChHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCCCCEEEeeccCceEcCCCccee
Confidence 99999997532 4788899999999999999999998 9999999999999999999999999998765432 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... . . +..
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~-----~--~-----p~~ 237 (329)
T PTZ00263 176 CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------PFRIYEKILAGRL-----K--F-----PNW 237 (329)
T ss_pred cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC------HHHHHHHHhcCCc-----C--C-----CCC
Confidence 46778999999999889999999999999999999999996421 1222222222110 0 0 011
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
...++.+++.+|+..||++||+ +++++.|
T Consensus 238 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 238 FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 2235678888999999999997 6888765
No 57
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.2e-37 Score=326.97 Aligned_cols=238 Identities=22% Similarity=0.349 Sum_probs=187.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||+|+||.||+|.. .+|+.||||.+..... ....+.+|+++++.++|+||+++++++...+..++||||+++|+
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 158 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGS 158 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCc
Confidence 47899999999999994 4789999999865432 24678899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|.+.. ...+.....++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 159 L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 227 (353)
T PLN00034 159 LEGTH---------IADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNS 227 (353)
T ss_pred ccccc---------cCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEcccccceecccccccccc
Confidence 86532 2456778889999999999999998 999999999999999999999999999865432 22
Q ss_pred CCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 PNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||++.. ...+.++|||||||++|||++|+.||...... +.......+.....
T Consensus 228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~----------- 293 (353)
T PLN00034 228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---DWASLMCAICMSQP----------- 293 (353)
T ss_pred cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---cHHHHHHHHhccCC-----------
Confidence 356778999998743 23456899999999999999999999732211 11111111111100
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+||..||++||++.|++++
T Consensus 294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111234468888999999999999999999996
No 58
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-37 Score=299.51 Aligned_cols=249 Identities=25% Similarity=0.316 Sum_probs=194.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~ 448 (663)
.+.|++|+||.||+|+ .++++.||+|+++-.... .--..+||.++.+.+|||||.+..+... -+..|+|||||+
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E 160 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE 160 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence 5789999999999999 668999999999765322 2346799999999999999999998764 356899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
. +|..+++..+ +++...+..-+..|+++|++|||... |+|||||++|+|++..|.+||+|||+|+.++....
T Consensus 161 h-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 161 H-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred h-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence 8 9999998654 56888999999999999999999999 99999999999999999999999999999987632
Q ss_pred ---CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh------hcccccccc
Q 006055 528 ---PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK------DEWTSEVFD 597 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d 597 (663)
...|..|.|||.+.+. .|++..|+||+|||+.||+++++-|.+..+.+ .+..+++ +..+.....
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d------Ql~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID------QLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH------HHHHHHHHhCCCccccCCCccc
Confidence 2346679999998775 68999999999999999999999987654322 2222221 111111111
Q ss_pred hhhh------c---------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELL------R---------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~------~---------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... . +.... ....-++++...+..||.+|.|++|.+++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1100 0 00000 12445677788999999999999999984
No 59
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.3e-37 Score=320.49 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=195.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++.. .+|..||+|.+.... .....+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 89 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 89 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCc
Confidence 36799999999999995 468899999987542 224578999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TPN 529 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~ 529 (663)
|.+++.... .+++..+..++.+++.||.|||+.+ .|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 90 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (331)
T cd06649 90 LDQVLKEAK-----RIPEEILGKVSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (331)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhhcC-CEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence 999997533 4789999999999999999999853 39999999999999999999999999997654332 234
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc-----------------
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT----------------- 592 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 592 (663)
++..|+|||++.+..++.++|||||||++|||++|+.||......+ +...+.........
T Consensus 164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
T cd06649 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPV 240 (331)
T ss_pred CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcccccccccc
Confidence 6778999999998889999999999999999999999996422110 00000000000000
Q ss_pred ----------c---cccch---hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 593 ----------S---EVFDL---ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 593 ----------~---~~~d~---~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
. +..+. .............++.+++.+||..||++|||++|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 00000 0000000112345788999999999999999999999875
No 60
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.1e-37 Score=323.71 Aligned_cols=244 Identities=18% Similarity=0.290 Sum_probs=193.0
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||++.. .+++.||||.++.... ....+..|..++..+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999984 5689999999975422 234577889998888 799999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC-C---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP-S--- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~-~--- 525 (663)
|+|.+++.... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .
T Consensus 81 g~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQR-----KLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 99999886432 4899999999999999999999998 99999999999999999999999999875321 1
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC--CCChHHHHHHHHhhcccccccchhhhcc
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE--GVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||+.....+ ......+....+......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR---------- 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC----------
Confidence 12346778999999999899999999999999999999999997532221 112223332222221110
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPS------MSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt------~~ev~~~ 637 (663)
.+.....++.+++.+|+..||++||+ +++++++
T Consensus 224 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 -IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 01122345778888999999999997 6777764
No 61
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-37 Score=309.55 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---------------HHHHHHHHHHhhcCCCCCcccceEEEEec-
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---------------EREFKDKIEGVGAVNHENLVPLRAYYYSM- 437 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~- 437 (663)
...||+|.||.|-+|. ..+++.||+|++.+.... -+...+||.+|++++|||||+|+++..++
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~ 181 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE 181 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc
Confidence 5679999999999999 567999999998653211 24788999999999999999999998765
Q ss_pred -CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecc
Q 006055 438 -DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDF 516 (663)
Q Consensus 438 -~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Df 516 (663)
+..|||+|||..|.+...=.. ...+...++++++.++..||+|||.++ ||||||||+|+||+++|++||+||
T Consensus 182 s~~~YlVley~s~G~v~w~p~d-----~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 182 SDKLYLVLEYCSKGEVKWCPPD-----KPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred cCceEEEEEeccCCccccCCCC-----cccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCCCcEEeecc
Confidence 468999999998876443211 122899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCC---------CCCCCCccccCccccCCCC----CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHH
Q 006055 517 GLAHLVGPS---------STPNRVAGYRAPEVTDPCK----VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWV 583 (663)
Q Consensus 517 g~a~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~ 583 (663)
|.+...... ....||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-+... ....
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~------~~l~ 328 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE------LELF 328 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH------HHHH
Confidence 998765322 1245888899999987732 35678999999999999999999965321 2222
Q ss_pred HHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCC
Q 006055 584 QSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGLQ 653 (663)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~ 653 (663)
..+..+ .+ .++...+...++.+++.+++.+||++|.+..+|.. +++......+.+
T Consensus 329 ~KIvn~---------pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~-----Hpwvt~~g~~~~ 383 (576)
T KOG0585|consen 329 DKIVND---------PL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL-----HPWVTRDGDSPQ 383 (576)
T ss_pred HHHhcC---------cc-cCCCcccccHHHHHHHHHHhhcChhheeehhhhee-----cceeccCCCCCc
Confidence 222221 11 22233345567888889999999999999999988 455555544443
No 62
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-36 Score=307.72 Aligned_cols=242 Identities=24% Similarity=0.357 Sum_probs=198.7
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||+||+|...++..+|+|.++........+.+|+.++.+++||||+++++++.+....++||||+.+|+|.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 88 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHH
Confidence 36799999999999998777789999988666667789999999999999999999999998888999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ..+++..++.++.+|+.||.|||+.+ ++|+||||+||++++++.+||+|||.++....... ..
T Consensus 89 ~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05113 89 YLREHG----KRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK 162 (256)
T ss_pred HHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCc
Confidence 997533 25899999999999999999999998 99999999999999999999999999876543321 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+...... .....
T Consensus 163 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~-----------~~~~~ 225 (256)
T cd05113 163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN------SETVEKVSQGLRL-----------YRPHL 225 (256)
T ss_pred cChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHhcCCCC-----------CCCCC
Confidence 3346999999988889999999999999999998 9999864321 1222222221111 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
....+.+++.+||..+|++||++.++++.|+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2357888999999999999999999998764
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.6e-37 Score=323.18 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=196.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +++.||||+++... .....+.+|++++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 367999999999999954 58999999987542 1235688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-CCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-STP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-~~~ 528 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 86 ~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 86 GDFRTLLNNLG-----VLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 99999997532 4789999999999999999999998 999999999999999999999999999866542 234
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... .+.... .......
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~---~~~~~~-~~~~~~~ 228 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKE---TLQRPV-YDDPRFN 228 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhccc---cccCCC-CCccccc
Confidence 57788999999999899999999999999999999999996532 1111222211110 000000 0000012
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+|+..+|++||+++|++++
T Consensus 229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 229 LSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 34567788889999999999999999986
No 64
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.8e-36 Score=307.23 Aligned_cols=245 Identities=25% Similarity=0.439 Sum_probs=201.9
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||+|+||.||+|...++..+|+|.+..... ....+..|+.+++.++|+||+++++++.+.+..++||||+++|+|.
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL 90 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence 578999999999999988899999999876644 4567899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----CC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST----PN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~ 529 (663)
++++... ...+++..+..++.+++.||.|||+.+ |+||||||+||++++++.+||+|||.+........ ..
T Consensus 91 ~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 91 AFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 9997643 235899999999999999999999998 99999999999999999999999999976643321 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+..|+|||.+....++.++||||||+++|+|++ |+.||..... ......+... .. ......
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~~-~~----------~~~~~~ 228 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN------HEVYDQITAG-YR----------MPCPAK 228 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH------HHHHHHHHhC-Cc----------CCCCCC
Confidence 3456999999988889999999999999999998 8999864321 1122222211 10 011122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
....+.+++.+|+..||++|||++++++.|+.+
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 229 CPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 345678999999999999999999999999864
No 65
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=5.7e-37 Score=320.95 Aligned_cols=237 Identities=25% Similarity=0.314 Sum_probs=191.9
Q ss_pred cccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
+.||+|+||.||++.. .+++.||||.++... .....+..|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999984 358899999987532 1234577899999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... .+.+..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLEREG-----IFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999999987533 4778888899999999999999998 9999999999999999999999999987543222
Q ss_pred ----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 527 ----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 527 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... ....+..+.....
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~~~~~~~----------- 217 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDKILKGKL----------- 217 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCCC-----------
Confidence 1246778999999998888999999999999999999999996422 2222233222211
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
..+.....++.+++.+|+..+|++|| ++++++++
T Consensus 218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 00111234577888899999999999 88888774
No 66
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.5e-36 Score=307.05 Aligned_cols=241 Identities=26% Similarity=0.418 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||++.++++..+|+|.+.........+.+|+++++.++|+||+++++++......++||||+++++|.+
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 88 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLN 88 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHH
Confidence 56799999999999998878899999987666667788999999999999999999999998899999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--C---C
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--P---N 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~---~ 529 (663)
+++... ..+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.+||+|||.++....... . .
T Consensus 89 ~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 162 (256)
T cd05059 89 YLRERK----GKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162 (256)
T ss_pred HHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCCCcEEECCcccceecccccccccCCCC
Confidence 997533 25899999999999999999999998 99999999999999999999999999976643221 1 1
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+..|+|||++.+..++.++||||||+++|||++ |+.||+..... .....+. ... . ......
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~-~~~-----~-----~~~~~~ 225 (256)
T cd05059 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS------EVVESVS-AGY-----R-----LYRPKL 225 (256)
T ss_pred CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH------HHHHHHH-cCC-----c-----CCCCCC
Confidence 2346999999998889999999999999999999 89998643211 1111111 110 0 001112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 345788999999999999999999999986
No 67
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=320.14 Aligned_cols=241 Identities=23% Similarity=0.360 Sum_probs=208.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCc-cEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDE-KLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ey~~~ 449 (663)
.+++|+|+||.++... ..+++.|++|.+.....+ ++...+|+.++++++|||||.+.+.|.+++. .++||+|++|
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eG 88 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEG 88 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCC
Confidence 4789999999999988 446889999998766443 3457899999999999999999999999888 8999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|++.+.+...+ ...+++.....++.|++.|+.|||+.. |+|||||+.||+++.+..|||+|||+|+.+.+..
T Consensus 89 g~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a 163 (426)
T KOG0589|consen 89 GDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA 163 (426)
T ss_pred CCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence 99999998766 346899999999999999999999887 9999999999999999999999999999988764
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
+..+|+.||+||.+.+..|..|+|||||||++|||++-+++|.+ .++...+..+.+... .+-
T Consensus 164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a------~~m~~Li~ki~~~~~-----------~Pl 226 (426)
T KOG0589|consen 164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA------SNMSELILKINRGLY-----------SPL 226 (426)
T ss_pred heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc------cchHHHHHHHhhccC-----------CCC
Confidence 45688999999999999999999999999999999999999965 345555555544431 223
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+..+..++..++..|+..+|+.||++.+++.+
T Consensus 227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 45566788899999999999999999999986
No 68
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.4e-36 Score=306.17 Aligned_cols=244 Identities=27% Similarity=0.430 Sum_probs=199.3
Q ss_pred hhcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 374 SAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
..+.||+|+||.||+|..+++..||+|.+.........+.+|+.++++++|+|++++++++. ....+++|||+++++|.
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 35789999999999999888889999999876666778999999999999999999999874 46689999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----P 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~ 528 (663)
++++... ...+++..+..++.+++.||.|||+.+ |+||||||+||++++++.++|+|||++........ .
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 89 DFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 9997533 235899999999999999999999998 99999999999999999999999999977644321 1
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.++..|+|||++.+..++.++||||||+++|||++ |..||.... .......+.. ... .....
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~-~~~----------~~~~~ 226 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVLEQVER-GYR----------MPCPQ 226 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc-CCC----------CCCCC
Confidence 23346999999988889999999999999999999 888986422 1122222211 110 01112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.....+.+++.+|+..+|++|||++++.+.|++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 234568899999999999999999999999875
No 69
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.1e-36 Score=305.81 Aligned_cols=244 Identities=28% Similarity=0.431 Sum_probs=198.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.++||+|+||.||+|...++..||+|.++......+.+.+|+++++.++|+||+++++++. ....++||||+++|+|.+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHH
Confidence 4679999999999999777778999999876666778999999999999999999999874 456899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ...+++..+..++.+++.||.|||+.+ ++||||||+||++++++.++|+|||.++....... ..
T Consensus 90 ~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~ 164 (262)
T cd05071 90 FLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 164 (262)
T ss_pred HHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCc
Confidence 997532 235789999999999999999999998 99999999999999999999999999976644321 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+.. .. ......+
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~------~~~~~~~~~-~~----------~~~~~~~ 227 (262)
T cd05071 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVER-GY----------RMPCPPE 227 (262)
T ss_pred ccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh------HHHHHHHhc-CC----------CCCCccc
Confidence 3446999999988889999999999999999999 8888864321 111111111 10 0011223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
....+.+++.+|++.+|++||+++++++.|++.
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 455788999999999999999999999999875
No 70
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-38 Score=308.50 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=192.4
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCc-----cEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE-----KLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~lv~ey~~ 448 (663)
.+++|+|+||.||+|. ..+++.||||+.-... +.-.+|+++|+.+.|||||++.-+|....+ ..+|||||+
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 4789999999999999 5567999999875432 233578999999999999999988865332 358999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~~ 527 (663)
. +|.++++.... ....++...+.-+..|+.+||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+...++..
T Consensus 106 ~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 106 E-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred H-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 8 99999885321 1234677777889999999999999998 9999999999999976 8999999999998866543
Q ss_pred ---CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc----------
Q 006055 528 ---PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS---------- 593 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 593 (663)
...+..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+... .+....+-.++.-...+
T Consensus 182 niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~---~dQL~eIik~lG~Pt~e~I~~mn~~y~ 258 (364)
T KOG0658|consen 182 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS---VDQLVEIIKVLGTPTREDIKSMNPNYT 258 (364)
T ss_pred ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH---HHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence 345666999999876 5699999999999999999999999976322 11111111111110000
Q ss_pred cccchhhhccc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH--HhhCCC
Q 006055 594 EVFDLELLRYQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI--EELHPS 644 (663)
Q Consensus 594 ~~~d~~~~~~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L--~~~~~~ 644 (663)
+...+.+.... .......+.++++.+++..+|.+|.++.|++.+= .++++.
T Consensus 259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 11111111111 1123345788999999999999999999998753 455544
No 71
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.1e-37 Score=321.42 Aligned_cols=244 Identities=18% Similarity=0.303 Sum_probs=191.6
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||.||+|.. .+++.||+|.++.... ....+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999994 5688999999875421 234577888887766 899999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|..++.... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 81 GDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 99998886532 4889999999999999999999998 999999999999999999999999998754221
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC--CCChHHHHHHHHhhcccccccchhhhcc
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE--GVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||....... ......++...+.....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------- 222 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------- 222 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----------
Confidence 12346778999999999999999999999999999999999996432221 11222232222222111
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPS------MSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt------~~ev~~~ 637 (663)
..+.....++.+++.+|+..||++||+ +.++++|
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 011122346778888999999999998 4677664
No 72
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=303.29 Aligned_cols=260 Identities=21% Similarity=0.349 Sum_probs=195.1
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEe-----cCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYS-----MDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lv~ey 446 (663)
+.||+|+||.|+.|. ..+|+.||+|++... ....+.-.+|+++++.++|+||+.+.+.+.. -++.|+|+|+
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el 107 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL 107 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence 679999999999999 567999999998744 3446778899999999999999999998754 3567999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~- 525 (663)
|+. +|..+++.+. .++....+.+.+|+++||.|+|+.+ |+||||||+|+|++.+...||+|||+|+.....
T Consensus 108 Met-DL~~iik~~~-----~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 108 MET-DLHQIIKSQQ-----DLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred Hhh-HHHHHHHcCc-----cccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEeccccceeeccccC
Confidence 965 9999998643 4899999999999999999999998 999999999999999999999999999988542
Q ss_pred -----CCCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChH---------HH--------
Q 006055 526 -----STPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLP---------RW-------- 582 (663)
Q Consensus 526 -----~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~---------~~-------- 582 (663)
.....|..|.|||++. ...|+...||||.||++.||++|+.-|.+...-+...+. ..
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 1123455699999974 467999999999999999999999998753221100000 00
Q ss_pred HHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCCCCC
Q 006055 583 VQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPSSTQ 647 (663)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~~~~ 647 (663)
++..++...........- .++ ......++++.+|+..||.+|+|++|+++| |...+....+
T Consensus 260 ar~yi~slp~~p~~~f~~-~fp---~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE 322 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSS-IFP---NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE 322 (359)
T ss_pred HHHHHHhCCCCCCCCHHH-HcC---CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC
Confidence 011111100000000000 011 122346677779999999999999999986 3555444433
No 73
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-36 Score=325.63 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 445 (663)
.++||+|+||.||+|... .+..||||+++.... ....+.+|+++++++. ||||++++++|.+....++|||
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 578999999999999842 234799999975422 2457899999999996 9999999999999999999999
Q ss_pred ccCCCChhHhhccCCCC---------------------------------------------------------------
Q 006055 446 YLTMGSLSALLHGNKGA--------------------------------------------------------------- 462 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~--------------------------------------------------------------- 462 (663)
|+++|+|.++++.....
T Consensus 122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T cd05105 122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS 201 (400)
T ss_pred ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence 99999999988653210
Q ss_pred ----------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEe
Q 006055 463 ----------------------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVS 514 (663)
Q Consensus 463 ----------------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~ 514 (663)
....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~~~~~~kL~ 279 (400)
T cd05105 202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLAQGKIVKIC 279 (400)
T ss_pred hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEeCCCEEEEE
Confidence 0124788899999999999999999998 9999999999999999999999
Q ss_pred ccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHH
Q 006055 515 DFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIV 587 (663)
Q Consensus 515 Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 587 (663)
|||+++....... ..++..|+|||.+.+..++.++|||||||++|||++ |..||....... ......
T Consensus 280 DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~------~~~~~~ 353 (400)
T cd05105 280 DFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS------TFYNKI 353 (400)
T ss_pred eCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH------HHHHHH
Confidence 9999986543221 223456999999988889999999999999999997 999986532111 111111
Q ss_pred hhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 588 KDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..... .........++.+++.+||..+|++||++.+|.++|+++.+
T Consensus 354 ~~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 354 KSGYR----------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred hcCCC----------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11110 01112334578899999999999999999999999998754
No 74
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-36 Score=313.44 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||++..+ +++.||||+++.... ..+.+.+|+++++.++||||+++++++...+..++||||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN 85 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence 367999999999999964 688999999875422 2456789999999999999999999999999999999999998
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
.+..+.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 86 MLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 776554321 24889999999999999999999998 9999999999999999999999999998764322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC---------ChHHHHHHHHhhccccccc
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV---------DLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 596 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||......+.. ....+..............
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 123567799999998888999999999999999999999999753221100 0000000000000000000
Q ss_pred chhhhccc-----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLRYQ-----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~~~-----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+...... .......++.+++.+|++.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 011134568899999999999999999999874
No 75
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.2e-36 Score=308.64 Aligned_cols=247 Identities=24% Similarity=0.399 Sum_probs=198.8
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... ++..||||.++..... .+.+.+|++++..++|+||+++++++......++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 467999999999999853 3478999998765333 46899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 447 LTMGSLSALLHGNKG---------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
+++|+|.++++.... .....+++.....++.+++.|+.|||+.+ ++||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~kl~d~g 167 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYDLVVKIGDFG 167 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCCCeEEECCcc
Confidence 999999999975421 12345889999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 518 LAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 518 ~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
+++...... ....+..|+|||++.+..++.++|||||||++|||++ |+.||..... ...+..+. ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~------~~~~~~~~-~~ 240 (280)
T cd05049 168 MSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN------EEVIECIT-QG 240 (280)
T ss_pred cceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHH-cC
Confidence 997653321 1223456999999999999999999999999999998 9999864321 12222221 11
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.... ........+.+++.+||..||++||+++||++.|++
T Consensus 241 ~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 241 RLLQ----------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CcCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1100 011234568899999999999999999999998863
No 76
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.2e-36 Score=306.41 Aligned_cols=243 Identities=25% Similarity=0.428 Sum_probs=199.6
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.++||+|+||.||+|..++++.||+|.+.........+.+|+.++++++|+|++++++++ ..+..++||||+++|+|.+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVD 89 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHH
Confidence 468999999999999988899999999987777778899999999999999999999986 4567899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
++.... ...+++..+..++.+++.||+|||+.+ ++||||||+||++++++.++|+|||++........ ..
T Consensus 90 ~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05067 90 FLKTPE---GIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAK 164 (260)
T ss_pred HHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCc
Confidence 987543 235899999999999999999999998 99999999999999999999999999976653221 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++.+..++.++||||||+++|||++ |+.||.... ....+...... ... .....
T Consensus 165 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~-~~~----------~~~~~ 227 (260)
T cd05067 165 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT------NPEVIQNLERG-YRM----------PRPDN 227 (260)
T ss_pred ccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHHHcC-CCC----------CCCCC
Confidence 3456999999988889999999999999999999 999996432 12222221111 100 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
...++.+++.+|+..+|++||+++++.+.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 228 CPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 23468889999999999999999999999875
No 77
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-37 Score=322.55 Aligned_cols=238 Identities=22% Similarity=0.235 Sum_probs=193.3
Q ss_pred hcccccccceEEEEEEecC--CcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEM--GTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.... +..||+|.+.... .....+.+|+.++..++||||+++++++.+....++||||++
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~ 114 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI 114 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence 4689999999999998543 3689999986432 223567889999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-C
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-T 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 527 (663)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 115 ~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~ 187 (340)
T PTZ00426 115 GGEFFTFLRRNK-----RFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT 187 (340)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcce
Confidence 999999997543 4889999999999999999999998 9999999999999999999999999998765432 3
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... . .+.
T Consensus 188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~~~~-~-----------~p~ 249 (340)
T PTZ00426 188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE------PLLIYQKILEGII-Y-----------FPK 249 (340)
T ss_pred ecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHhcCCC-C-----------CCC
Confidence 357788999999998889999999999999999999999996431 1122222222110 0 001
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.....+.+++.+|++.||++|+ +++|++++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 250 FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1123466788899999999995 89998876
No 78
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=317.91 Aligned_cols=247 Identities=23% Similarity=0.384 Sum_probs=207.3
Q ss_pred HhhcccccccceEEEEEEecC---C--cEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 373 ASAEVLGKGTFGTAYKAVLEM---G--TIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 373 ~~~~~lg~G~~g~Vy~~~~~~---g--~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
...++||+|-||.||+|...+ | -.||||..+.. ..+.+.|.+|..+|+.++|||||+++|.|.+ ...++|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEe
Confidence 446789999999999998432 3 35889988764 2346789999999999999999999999975 57899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
.++-|.|..+|+.++ ..++......+++||+.||+|||+.. .+||||..+|||+.....+||+|||+++.+...
T Consensus 471 L~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 471 LAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred cccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 999999999998765 34888899999999999999999997 999999999999999999999999999998877
Q ss_pred CCCCCCc-----cccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 526 STPNRVA-----GYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 526 ~~~~~~~-----~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.....+. .|||||.++-++++.++|||.|||++||++. |..||.+..+.+..- .+..+
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-------~iEnG--------- 608 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-------HIENG--------- 608 (974)
T ss_pred chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-------EecCC---------
Confidence 6554443 3999999999999999999999999999998 999998765543110 00000
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.+.+.++.++..|..++.+||+.+|.+||++.|+...|.++.+
T Consensus 609 -eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 609 -ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 0234456677789999999999999999999999999988765
No 79
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.1e-37 Score=322.43 Aligned_cols=237 Identities=22% Similarity=0.285 Sum_probs=191.5
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||++. ..+|+.||+|.++... .....+..|++++..++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 369999999999998 4578999999987542 12345678999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
+|.+++.... .+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 81 ELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 9999886532 58999999999999999999997 67 999999999999999999999999998754322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~------~~~~~~~i~~~~~------------~~ 215 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEI------------RF 215 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC------HHHHHHHHhcCCC------------CC
Confidence 12346778999999998899999999999999999999999996422 1122222211110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
+.....++.+++.+|+..||++|+ ++.+++++
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 111234677888899999999996 89999875
No 80
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-36 Score=312.14 Aligned_cols=243 Identities=20% Similarity=0.257 Sum_probs=192.0
Q ss_pred cccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||+||++.. .+|+.||+|.+...... ...+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999984 57899999998654221 24567899999999999999999999998999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----C
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST----P 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----~ 528 (663)
.+++..... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 988754321 2345899999999999999999999998 99999999999999999999999999976544322 2
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||....... ............. ......
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~------------~~~~~~ 223 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRILNDS------------VTYPDK 223 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--hHHHHHHhhcccC------------CCCccc
Confidence 46678999999999999999999999999999999999997532211 1111111111100 011122
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
...++.+++.+|++.||++|| ++++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 345678888999999999999 77778774
No 81
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.5e-37 Score=316.48 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=190.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||+|+||.||+|.. .+++.||+|.++... .....+.+|+.+++.++||||+++++++......++||||+++ +
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-D 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-C
Confidence 36799999999999984 468999999986542 2345678999999999999999999999988889999999985 9
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 89 l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~ 162 (288)
T cd07871 89 LKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN 162 (288)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence 998886432 24788999999999999999999998 9999999999999999999999999997653322 2
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---c---ccccccch--
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---E---WTSEVFDL-- 598 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~d~-- 598 (663)
..++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ...+..+... . ....+.+.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV------KEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCChHHhhccccchh
Confidence 335677999999865 5688999999999999999999999965322 1111111110 0 00000000
Q ss_pred ----hhhcc--cC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ----ELLRY--QN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ----~~~~~--~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..... .. ......+..+++.+|+..||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 00 00113456788999999999999999999864
No 82
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.5e-36 Score=306.01 Aligned_cols=244 Identities=25% Similarity=0.443 Sum_probs=197.9
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||+||+|.+. +...||||.++..... ...+.+|+..++.++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 88 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME 88 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence 468999999999999864 2468999998754322 4578899999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+++|.+++.... ..+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.++|+|||+++.......
T Consensus 89 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 89 NGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 999999997543 25899999999999999999999998 99999999999999999999999999987752211
Q ss_pred -----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 528 -----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 528 -----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
...+..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+ .....
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~-~~~~~--------- 226 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN------QDVIKAV-EDGYR--------- 226 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH------HHHHHHH-HcCCC---------
Confidence 122356999999998889999999999999999998 9999854321 1111111 11110
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.+.....+..+.+++.+|++.+|++||+++||+++|+++
T Consensus 227 -~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 -LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011122345688999999999999999999999999876
No 83
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.8e-36 Score=304.18 Aligned_cols=242 Identities=24% Similarity=0.358 Sum_probs=194.2
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999995 579999999876542 2246789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC----
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP---- 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~---- 528 (663)
.++++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRTEG----PRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 99997432 34789999999999999999999998 999999999999999999999999998765432111
Q ss_pred --CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 529 --NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 529 --~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.....|+|||.+.+..++.++||||||+++|||++ |..||...... . .......... ...
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~------~-~~~~~~~~~~----------~~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ------Q-TREAIEQGVR----------LPC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH------H-HHHHHHcCCC----------CCC
Confidence 11235999999998889999999999999999998 88888643211 1 1111111100 011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.......+.+++.+|+..+|++|||+.||.++|++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 12234578889999999999999999999998863
No 84
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.9e-37 Score=319.38 Aligned_cols=237 Identities=24% Similarity=0.317 Sum_probs=190.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+++.||||.++... .....+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999995 468999999987532 2234567788888766 799999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~-----~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 81 GDLMFHIQKSR-----RFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred chHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 99999887533 4889999999999999999999998 999999999999999999999999998754222
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~~------------~ 215 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILNDEVV------------Y 215 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhcCCCC------------C
Confidence 12346778999999998889999999999999999999999996432 22233333222110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSM------SEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~------~ev~~~ 637 (663)
+.....++.+++.+|++.||++||++ ++++++
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 11123467788889999999999998 666554
No 85
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.7e-37 Score=302.21 Aligned_cols=259 Identities=22% Similarity=0.332 Sum_probs=199.0
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCC-cccceEEEEecC------ccEEEE
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHEN-LVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------~~~lv~ 444 (663)
++||+|+||+||+|+ ..+|+.||+|++.-... -+....+|+.+++.++|+| |+++++++...+ ..++||
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf 96 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF 96 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence 569999999999999 66799999999875533 2455789999999999999 999999998877 678999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||++. +|..++......+ ..++...++.++.|+++||+|||+++ |+||||||.||||+++|.+||+|||+|+...-
T Consensus 97 e~~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~i 172 (323)
T KOG0594|consen 97 EFLDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSSGVLKLADFGLARAFSI 172 (323)
T ss_pred Eeecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCCCcEeeeccchHHHhcC
Confidence 99987 9999997654221 34667889999999999999999998 99999999999999999999999999987653
Q ss_pred CC----CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh-------hccc
Q 006055 525 SS----TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK-------DEWT 592 (663)
Q Consensus 525 ~~----~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 592 (663)
.. ....|..|.|||++.+. .|+...||||+||++.||++++..|.+..+ ......+.+ +.|.
T Consensus 173 p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se------~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 173 PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE------IDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH------HHHHHHHHHHcCCCCccCCC
Confidence 22 22355669999999876 689999999999999999999999987554 122222221 1121
Q ss_pred ccc----cchhhhcccChHHH----H---HHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCC
Q 006055 593 SEV----FDLELLRYQNVEEE----M---VQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPS 644 (663)
Q Consensus 593 ~~~----~d~~~~~~~~~~~~----~---~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~ 644 (663)
... .+............ . .+..+++.+|++.+|.+|.|++.+++| +.++...
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 111 01111111111111 1 367888999999999999999999997 5555333
No 86
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.3e-36 Score=317.84 Aligned_cols=252 Identities=25% Similarity=0.400 Sum_probs=196.1
Q ss_pred hhcccccccceEEEEEEe------cCCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEec-CccEEE
Q 006055 374 SAEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSM-DEKLLV 443 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~~lv 443 (663)
..++||+|+||.||+|.. .+++.||+|+++..... .+.+.+|+.++.++ +|+||++++++|... ...+++
T Consensus 11 i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v 90 (337)
T cd05054 11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (337)
T ss_pred hhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEE
Confidence 357899999999999963 23578999998754322 34577899999999 899999999988654 457899
Q ss_pred EEccCCCChhHhhccCCCC--------------------------------------------------------CCCCC
Q 006055 444 YDYLTMGSLSALLHGNKGA--------------------------------------------------------GRTPL 467 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~--------------------------------------------------------~~~~l 467 (663)
|||+++|+|.+++...... ...++
T Consensus 91 ~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (337)
T cd05054 91 VEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPL 170 (337)
T ss_pred EecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCC
Confidence 9999999999998643210 01368
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------CCCCccccCccccC
Q 006055 468 NWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------PNRVAGYRAPEVTD 541 (663)
Q Consensus 468 ~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~ 541 (663)
+|..+..++.||+.||.|||+.+ |+||||||+||++++++.++|+|||+++....... ..++..|+|||++.
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 248 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF 248 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence 99999999999999999999998 99999999999999999999999999987543221 12345699999999
Q ss_pred CCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHc
Q 006055 542 PCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDC 620 (663)
Q Consensus 542 ~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C 620 (663)
+..++.++|||||||++|||++ |..||......+ .....+...... ..+.....++.+++.+|
T Consensus 249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~c 312 (337)
T cd05054 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRM----------RAPEYATPEIYSIMLDC 312 (337)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCC----------CCCccCCHHHHHHHHHH
Confidence 9999999999999999999998 999986532111 111111111100 01112334688999999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhCC
Q 006055 621 SAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 621 ~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
|..+|++||++.|++++|+++.+
T Consensus 313 l~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 313 WHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999998754
No 87
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.2e-36 Score=315.71 Aligned_cols=246 Identities=23% Similarity=0.395 Sum_probs=195.7
Q ss_pred hcccccccceEEEEEEec-CCc----EEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGT----IVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.+. +|+ .||+|.++... ...+++.+|+.+++.++||||++++++|... ..++|+||+
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~ 90 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 90 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecC
Confidence 367999999999999853 344 48999987542 2346788999999999999999999998764 578999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.++++... ..+++...+.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 91 PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 9999999997543 34789999999999999999999998 99999999999999999999999999987654322
Q ss_pred C------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 P------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ~------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
. ..+..|+|||++.+..++.++|||||||++|||++ |+.||+... ...+ ..+......
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~------~~~~-~~~~~~~~~-------- 229 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------ASEI-SSILEKGER-------- 229 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHHH-HHHHhCCCC--------
Confidence 1 12346999999999899999999999999999998 999986432 1111 122221110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
......+..++.+++.+||..+|++||++.+++..+..+...
T Consensus 230 --~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 230 --LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 011112334678899999999999999999999999887544
No 88
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.2e-36 Score=303.17 Aligned_cols=243 Identities=26% Similarity=0.408 Sum_probs=197.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|....+..+|+|.+.........+.+|+.+++.++|+|++++++++. ....++||||+++|+|.+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLD 89 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHH
Confidence 3579999999999999877778999998766556678899999999999999999998874 456899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ...+++..+..++.+++.||.|||+.+ ++||||||+||++++++.++|+|||.++....... ..
T Consensus 90 ~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05069 90 FLKEGD---GKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAK 164 (260)
T ss_pred HHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCc
Confidence 997533 235789999999999999999999998 99999999999999999999999999976643321 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+. ..... .....
T Consensus 165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------~~~~~~~~-~~~~~----------~~~~~ 227 (260)
T cd05069 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN------REVLEQVE-RGYRM----------PCPQG 227 (260)
T ss_pred cchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-cCCCC----------CCCcc
Confidence 3456999999988889999999999999999999 8999864321 11111111 11100 11122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.+..+.+++.+|+..+|++||++++|++.|++
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 34568888999999999999999999999976
No 89
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.4e-36 Score=309.98 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=200.2
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||++.. .++..+|+|.+.... .....+.+|++++.+++||||+++++++......++||||+
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 89 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence 46799999999999974 235679999887543 23457899999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 448 TMGSLSALLHGNKG--------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 448 ~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
++++|.+++..... .....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 90 KHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccCCcEEeccCCcc
Confidence 99999999875331 12335899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 520 HLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 520 ~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
+....... ..++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~------~~~~~~i~~~~~~ 241 (288)
T cd05093 168 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQGRVL 241 (288)
T ss_pred ccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCcC
Confidence 76533221 123456999999998889999999999999999998 8999864321 1122222221110
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
. .......++.+++.+|+..+|.+|||++|+.+.|+.+...
T Consensus 242 -~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 242 -Q----------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -C----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0 0111234688999999999999999999999999998644
No 90
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-36 Score=318.65 Aligned_cols=237 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+++.||+|.++... .....+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999995 458899999987542 1234567788888765 899999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|..++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 81 GDLMFQIQRSR-----KFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 99999886532 4889999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~~~~~------------~ 215 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLFESILHDDVL------------Y 215 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCC------------C
Confidence 2236778999999998889999999999999999999999996532 22233333222110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP-------SMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP-------t~~ev~~~ 637 (663)
+.....++.+++.+|+..||++|| ++++++++
T Consensus 216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 111234677888899999999999 78888765
No 91
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.1e-37 Score=319.89 Aligned_cols=244 Identities=18% Similarity=0.290 Sum_probs=193.5
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||+||++.. .+++.||+|+++.... ..+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999994 5688999999976422 234577888888887 699999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC-C---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP-S--- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~-~--- 525 (663)
|+|..++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.... .
T Consensus 81 ~~L~~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 81 GDLMFHMQRQR-----KLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 99999886432 4899999999999999999999998 99999999999999999999999999875322 1
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.........+...++.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 222 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR-----------I 222 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC-----------C
Confidence 12346778999999999999999999999999999999999997644333333333333332221110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSM------SEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~------~ev~~~ 637 (663)
+......+.+++.+|+..||++||++ +++++|
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 11122356788889999999999984 566654
No 92
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.9e-36 Score=307.39 Aligned_cols=239 Identities=24% Similarity=0.342 Sum_probs=188.4
Q ss_pred cccccccceEEEEEEecC-------------CcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccE
Q 006055 376 EVLGKGTFGTAYKAVLEM-------------GTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKL 441 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 441 (663)
+.||+|+||.||+|.+.+ ...||+|.+..... ....+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998432 23589998765432 2356888899999999999999999999999999
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-------eEEe
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE-------ARVS 514 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~-------~kl~ 514 (663)
+||||+++|+|..+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCceeEeC
Confidence 9999999999999887432 35899999999999999999999998 999999999999987664 8999
Q ss_pred ccccccccCCCCCCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHH-hCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 515 DFGLAHLVGPSSTPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELL-TGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 515 Dfg~a~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
|||++..........++..|+|||++. +..++.++|||||||++|||+ +|..|+...... . .........
T Consensus 155 d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~-~~~~~~~~~- 226 (262)
T cd05077 155 DPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA------E-KERFYEGQC- 226 (262)
T ss_pred CCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh------H-HHHHHhcCc-
Confidence 999997765554555677899999986 466889999999999999998 588887542111 1 001111100
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
........++.+++.+||..||++||++.+++++++
T Consensus 227 -----------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 227 -----------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -----------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 001112346788999999999999999999998763
No 93
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.8e-36 Score=304.47 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=201.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+++.||||.++.... ....+.+|+++++.++|||++++++++.+....++|+||+++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA 86 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence 36799999999999994 5789999998764321 234688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++..... ....+++.....++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 87 ~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 163 (267)
T cd08228 87 GDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCCCCEEECccccceeccchhHHH
Confidence 999998864321 1235788999999999999999999998 9999999999999999999999999988765432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .....+...+...... ...
T Consensus 164 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~----------~~~ 229 (267)
T cd08228 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLFSLCQKIEQCDYP----------PLP 229 (267)
T ss_pred hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc----ccHHHHHHHHhcCCCC----------CCC
Confidence 2345667999999988888999999999999999999999985421 1222222222111110 011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.......+.+++.+||..+|++||+++||++.+++++
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1234456888999999999999999999999999875
No 94
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=333.62 Aligned_cols=243 Identities=21% Similarity=0.254 Sum_probs=195.1
Q ss_pred hcccccccceEEEEEEe-cC-CcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EM-GTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~-g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+ ++.||+|.+..... ....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~ 151 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGD 151 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCC
Confidence 46899999999999984 33 67888887654322 23567889999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.++++... ....++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 152 L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~ 228 (478)
T PTZ00267 152 LNKQIKQRL-KEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA 228 (478)
T ss_pred HHHHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccc
Confidence 999886422 12346889999999999999999999998 9999999999999999999999999998764321
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++.+|+|||++.+..++.++|||||||++|||++|+.||... +....+..+...... ..
T Consensus 229 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~------~~~~~~~~~~~~~~~-----------~~ 291 (478)
T PTZ00267 229 SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP------SQREIMQQVLYGKYD-----------PF 291 (478)
T ss_pred cccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCC-----------CC
Confidence 223677899999999989999999999999999999999999642 222333333222111 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.....++.+++.+|+..||++||++++++.+
T Consensus 292 ~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 11233467888999999999999999998753
No 95
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.8e-36 Score=303.46 Aligned_cols=240 Identities=26% Similarity=0.380 Sum_probs=192.7
Q ss_pred ccccccceEEEEEEe---cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 377 VLGKGTFGTAYKAVL---EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.||+|+||.||+|.+ .++..+|+|+++..... .+++.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 35789999998754322 457889999999999999999999875 45678999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 999999643 24889999999999999999999998 99999999999999999999999999987654322
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+...+..... ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------~~~~~~i~~~~~-~~-------- 218 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG------NEVTQMIESGER-ME-------- 218 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHCCCC-CC--------
Confidence 112346999999988888999999999999999998 9999965321 122222211111 00
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.+.....++.+++.+||..||++||++.+|++.|++.
T Consensus 219 --~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 219 --CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112334678899999999999999999999999864
No 96
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-37 Score=321.24 Aligned_cols=240 Identities=25% Similarity=0.334 Sum_probs=194.5
Q ss_pred ccCHHHHHHHhhcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEec
Q 006055 364 VFDLEDLLRASAEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSM 437 (663)
Q Consensus 364 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 437 (663)
.++++++ ....+||+|.||+|+++.. .+++.+|||.+++... .-+..+.|.+++... +||.++.++.+|...
T Consensus 364 ~~~l~~F--~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 364 PLTLDDF--RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred cccccce--EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 3444444 2357899999999999994 5689999999987632 234566777776665 699999999999999
Q ss_pred CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 438 DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 438 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
++.++||||+.||++..+.+. ..+++..+..++..|+.||.|||+++ |||||||-+|||+|.+|++||+|||
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred CeEEEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcccCcEEecccc
Confidence 999999999999996666653 34899999999999999999999999 9999999999999999999999999
Q ss_pred cccccC-CC---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 518 LAHLVG-PS---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 518 ~a~~~~-~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
+++... .+ .+..||+.|||||++.+..|+..+|.|||||+||||+.|..||.+..++ +....++.+..
T Consensus 514 lcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe------e~FdsI~~d~~-- 585 (694)
T KOG0694|consen 514 LCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE------EVFDSIVNDEV-- 585 (694)
T ss_pred cccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHhcCCC--
Confidence 998754 22 2334788899999999999999999999999999999999999865432 23333333321
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCH
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSM 631 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~ 631 (663)
..+.....+.+.++.+.+.++|++|.-+
T Consensus 586 ----------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 586 ----------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1223345577888889999999999876
No 97
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.8e-36 Score=319.43 Aligned_cols=254 Identities=22% Similarity=0.354 Sum_probs=187.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecC-----ccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-----EKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e 445 (663)
.++||+|+||.||+|. ..+|+.||||++.... .....+.+|+++++.++||||+++++++.... ..++|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 4689999999999999 4578999999987532 22356889999999999999999999886432 4799999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+. ++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~-~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 85 LME-SDLHQVIKAND-----DLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred cCC-CCHHHHHHhcc-----cCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 996 68999886432 4899999999999999999999998 999999999999999999999999999764322
Q ss_pred C-------CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC---------CChHHHHHHHH
Q 006055 526 S-------TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG---------VDLPRWVQSIV 587 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~---------~~~~~~~~~~~ 587 (663)
. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+...+.
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 1236677999999866 5788999999999999999999999965321100 00000000000
Q ss_pred hhcccccccchhhh-cccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 588 KDEWTSEVFDLELL-RYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 588 ~~~~~~~~~d~~~~-~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. .....+..-.. ..... ......+.+++.+|+..||++|||++|++++
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NE-KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hh-hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 00000000000 00000 0123456789999999999999999999986
No 98
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=316.70 Aligned_cols=249 Identities=27% Similarity=0.427 Sum_probs=213.3
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||.|.||.||.|.|+ -.-.||||.++.....-.+|..|..+|+.++|||+|+++|+|......|+|+|||..|+|.
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLL 351 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLL 351 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHH
Confidence 579999999999999975 3678999999988888899999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC----
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN---- 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---- 529 (663)
++|+.+. +..++-...+.+|.||+.|++||..+. +|||||..+|.|+.++..+|++|||+++++..+..+.
T Consensus 352 dYLRecn---r~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA 426 (1157)
T KOG4278|consen 352 DYLRECN---RSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA 426 (1157)
T ss_pred HHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc
Confidence 9999765 455777888999999999999999987 9999999999999999999999999999986554321
Q ss_pred -CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 530 -RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 530 -~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..+.|.|||-+....++.|+|||+|||+|||+.| |..||.+ .++.+ +...+..++ +...++
T Consensus 427 KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG------idlSq-VY~LLEkgy----------RM~~Pe 489 (1157)
T KOG4278|consen 427 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQ-VYGLLEKGY----------RMDGPE 489 (1157)
T ss_pred cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC------ccHHH-HHHHHhccc----------cccCCC
Confidence 2345999999998899999999999999999999 8888854 34333 333333333 223455
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.++..+.++++.||..+|.+||++.|+-+.++.+....
T Consensus 490 GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 490 GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 67778999999999999999999999999998875543
No 99
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.8e-36 Score=308.73 Aligned_cols=244 Identities=23% Similarity=0.263 Sum_probs=192.3
Q ss_pred cccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||.||++.. .+|+.||+|.+.... ...+.+..|+++++.++||||+++++++.+..+.++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999984 569999999986432 1234566799999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---TPN 529 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~ 529 (663)
.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 98886433 345889999999999999999999998 9999999999999999999999999987664432 234
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++||||+||++|||++|+.||...... ............... .. .....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~-----~~------~~~~~ 222 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAKEELKRRTLEDEV-----KF------EHQNF 222 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhHHHHHHHhhcccc-----cc------ccccC
Confidence 667899999998888999999999999999999999999653221 111111111111110 00 00123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
..++.+++.+|+..||++||+++|+++.+.
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 346788889999999999999977664443
No 100
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.1e-36 Score=307.78 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=195.3
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.. .++..||+|.++..... ...+.+|+++++.++||||+++++++......++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence 46899999999999984 35688999998754322 357889999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEec
Q 006055 448 TMGSLSALLHGNKG------------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSD 515 (663)
Q Consensus 448 ~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~D 515 (663)
++|+|.+++..... .....+++.....++.+++.||.|||+.+ |+||||||+||++++++.+||+|
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcCCCcEEecc
Confidence 99999999853221 11235789999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHh
Q 006055 516 FGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 516 fg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
||+++...... ....+..|+|||++.+..++.++||||||+++|||++ |..||..... ......+..
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~ 241 (283)
T cd05090 168 LGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN------QEVIEMVRK 241 (283)
T ss_pred ccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc
Confidence 99997654322 1223456999999988889999999999999999998 9889864221 111111111
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
... . ........++.+++.+|+..||++||++.++.++|..
T Consensus 242 ~~~-~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 242 RQL-L----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCc-C----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 0 0111223467888899999999999999999998864
No 101
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.9e-36 Score=305.32 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEecC-Cc--EEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM-GT--IVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~l 442 (663)
.+.||+|+||.||+|.... +. .||+|.++.... ..+.+.+|+++++.++|+||+++++++... ...++
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 4679999999999999653 33 699998875422 235688899999999999999999987532 24689
Q ss_pred EEEccCCCChhHhhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 443 VYDYLTMGSLSALLHGNK-GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
||||+++|+|.+++.... ......+++.....++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999998874322 112345899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
...... ...+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~-- 233 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN------SEIYDYLRQGNRL-- 233 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCCCC--
Confidence 644321 123456999999998889999999999999999999 8888864211 1222222111110
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.........+.+++.+||..+|++|||++|+++.|+++
T Consensus 234 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 ---------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01112334678999999999999999999999999875
No 102
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.9e-36 Score=315.88 Aligned_cols=236 Identities=24% Similarity=0.310 Sum_probs=185.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhc-CCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGA-VNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+++.||+|.++... ...+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999995 468899999987542 122345556666654 4899999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 81 GDLMFHIQSSG-----RFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 99999987532 4888999999999999999999998 9999999999999999999999999997543221
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~------------~~ 215 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED------EDELFDSILNDRP------------HF 215 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCC------------CC
Confidence 2346778999999998889999999999999999999999996532 1222222221110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMS-EVIK 636 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~-ev~~ 636 (663)
+.....++.+++.+|++.+|++||++. ++.+
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111234567888899999999999875 5544
No 103
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.2e-36 Score=316.68 Aligned_cols=237 Identities=25% Similarity=0.303 Sum_probs=188.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHH---hhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEG---VGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~---l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|+++ ++.++||||+++++++...+..++||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 36799999999999984 568999999997542 112445566554 4567899999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~- 525 (663)
+++|+|..+++.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 84 AAGGDLMMHIHTD------VFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred CCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999888642 4899999999999999999999998 999999999999999999999999998754322
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 526 ---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+......
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~~~i~~~~~~---------- 219 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVFDSIVNDEVR---------- 219 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC----------
Confidence 12346778999999999889999999999999999999999996432 22222222222110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.+......+.+++.+|+..||++|| ++.+++++
T Consensus 220 --~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 220 --YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred --CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1112234577889999999999999 56676664
No 104
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.2e-36 Score=308.32 Aligned_cols=247 Identities=22% Similarity=0.364 Sum_probs=195.0
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... ++..||+|.+..... ...++.+|+.+++.++||||+++++++......++||||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 90 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEec
Confidence 467999999999998743 356899999864322 245688999999999999999999999988999999999
Q ss_pred cCCCChhHhhccCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKGA-----GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+++|+|.++++..... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++.
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~~~~~l~dfg~~~~ 168 (277)
T cd05062 91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRD 168 (277)
T ss_pred CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCCCCEEECCCCCccc
Confidence 9999999998753211 1234688999999999999999999998 99999999999999999999999999875
Q ss_pred cCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
...... ..++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+..... ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~-~~ 241 (277)
T cd05062 169 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS------NEQVLRFVMEGGL-LD 241 (277)
T ss_pred cCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcCCc-CC
Confidence 533221 223556999999998889999999999999999999 788885432 1222222221111 00
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
........+.+++.+|+..+|++|||+.|++++|++
T Consensus 242 ----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 242 ----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 011233468889999999999999999999998864
No 105
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-36 Score=315.39 Aligned_cols=236 Identities=24% Similarity=0.321 Sum_probs=187.4
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhc-CCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGA-VNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||+|.. .+++.||||.++... .....+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999995 458899999987542 223456667777765 5999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++... ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 9999998753 24789999999999999999999998 999999999999999999999999998753221
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~i~~~~~------------~~ 215 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD------EEELFQSIRMDNP------------CY 215 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC------------CC
Confidence 12346778999999998889999999999999999999999996532 1122222211110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMS-EVIK 636 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~-ev~~ 636 (663)
+.....++.+++.+|+..||++||++. ++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111234567888899999999999997 6654
No 106
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-36 Score=321.05 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=190.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||++. ..+++.||+|... ...+.+|+++++.++||||+++++++......++|+||+. ++|.
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~ 170 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY 170 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence 4689999999999999 4578999999753 2457889999999999999999999999999999999986 6898
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~ 528 (663)
.++.... .+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 171 ~~l~~~~-----~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 243 (391)
T PHA03212 171 CYLAAKR-----NIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW 243 (391)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccc
Confidence 8886432 4789999999999999999999998 999999999999999999999999999754321 123
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC-ChHHHHHHHHhhcc--ccc-ccc-------
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV-DLPRWVQSIVKDEW--TSE-VFD------- 597 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~--~~~-~~d------- 597 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||.......+. +....+..++.... ..+ ..+
T Consensus 244 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~ 323 (391)
T PHA03212 244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDE 323 (391)
T ss_pred cCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHH
Confidence 4678899999999888999999999999999999999887543221111 11111111111000 000 000
Q ss_pred ------------hh-hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 598 ------------LE-LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 598 ------------~~-~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+. ...+....+...++.+++.+|+..||++|||++|+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000111233557889999999999999999999997
No 107
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-36 Score=310.72 Aligned_cols=258 Identities=27% Similarity=0.350 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEE-----ecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-----LEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-----~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 445 (663)
.+.||+|+||+||++. ..++..||+|.++.... ....+.+|+++++.++||||+++++++...+ ..++|||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME 88 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence 3679999999998764 24678999999876432 3567889999999999999999999886543 4789999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++.....
T Consensus 89 ~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 89 YVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred CCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 99999999999743 3899999999999999999999998 999999999999999999999999999876543
Q ss_pred CC-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 ST-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 ~~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
.. ..++..|+|||.+....++.++||||||++++||++|+.|+......- .+...............+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhc
Confidence 21 123445999999988889999999999999999999999986432110 0000000000000000000000
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.. ..+.....+.++.+++.+||..+|++|||++++++.|+++.
T Consensus 240 ~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 240 GM-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 01112233457889999999999999999999999999875
No 108
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.6e-36 Score=308.28 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=199.9
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcccC-HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS-EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+++.. ++..+++|.++..... .+.+.+|++.+++++|+||+++++++......++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 89 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence 357999999999999742 3567999998755332 467899999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecc
Q 006055 448 TMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDF 516 (663)
Q Consensus 448 ~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Df 516 (663)
++++|.+++..... .....+++..++.++.+++.||.|||+++ |+||||||+||+++.++.++|+||
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccCCcEEECCC
Confidence 99999999975321 11234899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhh
Q 006055 517 GLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 517 g~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
|++....... ...++..|+|||++.+..++.++||||||+++|||++ |+.||..... ...+... ..
T Consensus 168 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~-~~ 240 (291)
T cd05094 168 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------TEVIECI-TQ 240 (291)
T ss_pred CcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-hC
Confidence 9997654322 1223456999999998889999999999999999999 9999865321 1122211 11
Q ss_pred cccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 590 EWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..... .....+..+.+++.+||..+|++||++++|+++|+++..
T Consensus 241 ~~~~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 241 GRVLE----------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCC----------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11111 011234568899999999999999999999999999854
No 109
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-36 Score=309.47 Aligned_cols=238 Identities=24% Similarity=0.326 Sum_probs=186.4
Q ss_pred ccccccceEEEEEEecC-------------------------CcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccc
Q 006055 377 VLGKGTFGTAYKAVLEM-------------------------GTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPL 430 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l 430 (663)
.||+|+||.||+|.+.. ...||+|.+..... ....+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 13589998865432 23568888999999999999999
Q ss_pred eEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-
Q 006055 431 RAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY- 509 (663)
Q Consensus 431 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~- 509 (663)
+++|.+....++||||+++|+|..++.... ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEeccCc
Confidence 999999999999999999999999987532 24789999999999999999999998 99999999999998654
Q ss_pred ------ceEEeccccccccCCCCCCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHH-hCCCCCccccCCCCCChHH
Q 006055 510 ------EARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELL-TGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 510 ------~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~ell-tg~~p~~~~~~~~~~~~~~ 581 (663)
.+|++|||.+..........++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......+ .
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~-- 230 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---K-- 230 (274)
T ss_pred ccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---H--
Confidence 379999999866544444455677999998865 56789999999999999995 6999986532211 1
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
........ ..+.....++.+++.+||..+|++|||++++++.|+
T Consensus 231 --~~~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 --ERFYEKKH------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --HHHHHhcc------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11111100 001112236788999999999999999999999873
No 110
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.8e-36 Score=306.01 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=196.3
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... ++..||+|+++..... ...+.+|+.++..++||||+++++++......++++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence 568999999999999853 3578999998754322 35688999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEec
Q 006055 447 LTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSD 515 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~D 515 (663)
+.+++|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecCCCceEecc
Confidence 999999999853210 11235889999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHh
Q 006055 516 FGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 516 fg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
||+++....... ...+..|+|||++.+..++.++|||||||++|||++ |..||.... ...+...+..
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~i~~ 241 (283)
T cd05091 168 LGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVIEMIRN 241 (283)
T ss_pred cccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc
Confidence 999876543221 223457999999988889999999999999999998 888886421 2223332222
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.... ..+...+..+.+++.+|++.+|++||+++||++.|+.
T Consensus 242 ~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 RQVL-----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCcC-----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 2110 1112344567889999999999999999999998864
No 111
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-36 Score=315.40 Aligned_cols=236 Identities=24% Similarity=0.294 Sum_probs=186.8
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhc-CCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGA-VNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+|+.||+|.++... .....+..|..++.. .+||||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 3699999999999995 468999999987542 223456667777765 4899999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 81 GDLMFHIQDKG-----RFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 99999887532 4788999999999999999999998 999999999999999999999999998753221
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... . .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~------~~~~~~~~~~~~~-------~-----~ 215 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD------EDELFESIRVDTP-------H-----Y 215 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC-------C-----C
Confidence 12346778999999999899999999999999999999999996432 1122222211110 0 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMS-EVIK 636 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~-ev~~ 636 (663)
+.....++.+++.+|++.||++||++. ++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 216 PRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111233567888899999999999984 5653
No 112
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1e-35 Score=303.57 Aligned_cols=248 Identities=22% Similarity=0.355 Sum_probs=196.5
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCc------cE
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDE------KL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~ 441 (663)
.+.||+|+||.||+|.... +..||+|+++..... ...+.+|++.++.++|+||+++++++...+. .+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 4679999999999998532 378999998754332 3468899999999999999999999876554 68
Q ss_pred EEEEccCCCChhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKG-AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|+||+++|+|..++..... .....+++.....++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 84 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCCCeEEECCcccee
Confidence 99999999999998854321 12346899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 521 LVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 521 ~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
....... ...+..|+|||++.+..++.++|||||||++|||++ |..||..... .............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~- 234 (273)
T cd05035 162 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN------HEIYDYLRHGNRL- 234 (273)
T ss_pred eccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC-
Confidence 7654322 122346999999988889999999999999999999 8888864321 1222222211110
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..+.....++.+++.+|+..||++||++.|+++.|+++
T Consensus 235 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 ----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11122345788999999999999999999999999876
No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.2e-37 Score=319.60 Aligned_cols=233 Identities=27% Similarity=0.333 Sum_probs=189.1
Q ss_pred cccccccceEEEEEEe----cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
+.||+|+||.||++.. .+|+.||+|+++.... ....+..|++++++++||||+++++++.+....++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4699999999999874 3689999999975422 23457789999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 99999998643 24899999999999999999999998 9999999999999999999999999997654331
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||.+.+..++.++|||||||++|||++|+.||.... .......+..... .
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i~~~~~------------~ 216 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMILKAKL------------G 216 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC------HHHHHHHHHcCCC------------C
Confidence 2236778999999998888999999999999999999999996421 1222222222111 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSE 633 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~e 633 (663)
.+......+.+++.+|++.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 11112345778888999999999999544
No 114
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.2e-36 Score=300.27 Aligned_cols=241 Identities=25% Similarity=0.387 Sum_probs=195.1
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
++||+|+||.||+|...+++.||+|.+..... ....+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36999999999999988899999999875432 2346889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----P 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~ 528 (663)
+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||++++++.+||+|||++........ .
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKKK----DELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 9986532 24789999999999999999999998 99999999999999999999999999875433211 1
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.....|+|||++.+..++.++||||||+++||+++ |..||..... ......+ ...... ....
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~------~~~~~~~-~~~~~~----------~~~~ 217 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN------QQAREQV-EKGYRM----------SCPQ 217 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHH-HcCCCC----------CCCC
Confidence 22346999999998889999999999999999998 9999864321 1111111 111100 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
....++.+++.+|+..+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23457888999999999999999999999874
No 115
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.1e-36 Score=314.98 Aligned_cols=190 Identities=23% Similarity=0.358 Sum_probs=165.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||+|+||.||++... +++.+|+|.++.... ....+.+|+++++.++|+||++++++|.+.+..++||||+++|+
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 89 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 89 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCc
Confidence 468999999999999954 688999998865422 23568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TPN 529 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~ 529 (663)
|.+++.... .+++.....++.+++.||.|||+.+ .|+||||||+||+++.++.+||+|||++....... ...
T Consensus 90 L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 90 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 999997532 4788999999999999999999752 39999999999999999999999999997654322 234
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 67789999999988899999999999999999999999975
No 116
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.3e-36 Score=320.18 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=197.9
Q ss_pred hhcccccccceEEEEEEec------CCcEEEEEEecCcccC--HHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEE
Q 006055 374 SAEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 444 (663)
..+.||+|+||.||+|.+. .++.||||+++..... ...+.+|++++.++. ||||++++++|......++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 4678999999999999853 3468999999765322 346889999999997 999999999999999999999
Q ss_pred EccCCCChhHhhccCCC---------------------------------------------------------------
Q 006055 445 DYLTMGSLSALLHGNKG--------------------------------------------------------------- 461 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~--------------------------------------------------------------- 461 (663)
||+++|+|.++++....
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 99999999999975421
Q ss_pred ------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCce
Q 006055 462 ------------------------------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEA 511 (663)
Q Consensus 462 ------------------------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~ 511 (663)
.....+++...+.++.|++.||.|||+.+ |+||||||+|||+++++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEEEeCCCEE
Confidence 01134788889999999999999999987 9999999999999999999
Q ss_pred EEeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHH
Q 006055 512 RVSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQ 584 (663)
Q Consensus 512 kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 584 (663)
||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..||..... .....
T Consensus 279 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~------~~~~~ 352 (401)
T cd05107 279 KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM------NEQFY 352 (401)
T ss_pred EEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc------hHHHH
Confidence 999999998653221 1223456999999988889999999999999999998 8889864321 11111
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
..+...... ..+.....++.+++.+||..+|++||+++|+++.|+++.
T Consensus 353 ~~~~~~~~~----------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 353 NAIKRGYRM----------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111100 011122346888889999999999999999999999864
No 117
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.2e-36 Score=309.66 Aligned_cols=244 Identities=25% Similarity=0.299 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||++.. .+++.||||.+..... ....+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 36799999999999994 5789999999865422 234577899999999999999999999998999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++.......
T Consensus 85 ~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 85 GDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred CcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 99998886432 235899999999999999999999998 99999999999999999999999999987643322
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||++.+..++.++||||+||++|||++|+.||...... .....+...+.... ....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~-----------~~~~ 225 (285)
T cd05605 160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK---VKREEVERRVKEDQ-----------EEYS 225 (285)
T ss_pred cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh---hHHHHHHHHhhhcc-----------cccC
Confidence 24567799999999888999999999999999999999999753211 11111111111100 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
......+.+++.+|+..||++|| ++++++++
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 22344678889999999999999 88898775
No 118
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-36 Score=309.89 Aligned_cols=252 Identities=23% Similarity=0.378 Sum_probs=200.0
Q ss_pred hhcccccccceEEEEEEe--------cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEE
Q 006055 374 SAEVLGKGTFGTAYKAVL--------EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 442 (663)
..+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++..+ +||||+++++++......++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 457899999999999973 134579999987542 2246788999999999 89999999999999999999
Q ss_pred EEEccCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCce
Q 006055 443 VYDYLTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEA 511 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~ 511 (663)
||||+++|+|.+++...... ....+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nili~~~~~~ 176 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVLVTENNVM 176 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEEEcCCCcE
Confidence 99999999999999754221 1235889999999999999999999998 9999999999999999999
Q ss_pred EEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHH
Q 006055 512 RVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQ 584 (663)
Q Consensus 512 kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 584 (663)
||+|||+++....... ...+..|+|||++.+..++.++||||||+++|||++ |..||... ....+..
T Consensus 177 kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~ 250 (304)
T cd05101 177 KIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEELFK 250 (304)
T ss_pred EECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC------CHHHHHH
Confidence 9999999987643221 123456999999988889999999999999999998 78887542 2222322
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.+..... . .........+.+++.+||..+|++|||+.|+++.|+++..-
T Consensus 251 ~~~~~~~-~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 251 LLKEGHR-M----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHcCCc-C----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2211110 0 01122345688889999999999999999999999987554
No 119
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-36 Score=311.68 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=188.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|... +++.||||.+.... .....+.+|+.+++.++||||+++++++.+....++||||+. ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TD 88 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cC
Confidence 367999999999999954 68999999987542 223567889999999999999999999999999999999996 58
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..... ..
T Consensus 89 l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 162 (303)
T cd07869 89 LCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN 162 (303)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence 888776432 34788899999999999999999998 999999999999999999999999998754322 12
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---hc----ccc----cc
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK---DE----WTS----EV 595 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~----~~~----~~ 595 (663)
..++..|+|||++.+ ..++.++||||+||++|||++|+.||....+ ....+..+.. .. +.. ..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-----IQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHHhCCCChhhccchhhccc
Confidence 335677999999865 4578899999999999999999999975321 1111111110 00 000 00
Q ss_pred cchhhh---cccChH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 596 FDLELL---RYQNVE------EEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 596 ~d~~~~---~~~~~~------~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+++... ...... .....+.+++.+|+..||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 000000 11245678889999999999999999987
No 120
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.7e-36 Score=315.15 Aligned_cols=237 Identities=23% Similarity=0.307 Sum_probs=190.6
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||++.. .+++.||||.++... .....+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999985 458899999987542 2234567788888877 799999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 81 GDLMFHIQRSG-----RFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 99999887532 4899999999999999999999998 9999999999999999999999999987532221
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~~~~~------------~~ 215 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------EDELFQSILEDEV------------RY 215 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcCCC------------CC
Confidence 1235677999999999999999999999999999999999996432 1222222221111 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~~ 637 (663)
+......+.+++.+|+..||++||++ .+++++
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 11223467888899999999999999 888764
No 121
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7e-36 Score=302.29 Aligned_cols=241 Identities=24% Similarity=0.376 Sum_probs=191.8
Q ss_pred ccccccceEEEEEEec---CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 377 VLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999753 356799999875432 2356889999999999999999999875 457899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++.... ..+++..+++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGKK----DEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 999987432 35899999999999999999999998 99999999999999999999999999976543321
Q ss_pred ---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 528 ---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...+..|+|||.+.+..++.++||||||+++||+++ |..||..... ......+... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~-~~~---------- 217 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG------PEVMSFIEQG-KRL---------- 217 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH------HHHHHHHHCC-CCC----------
Confidence 112346999999988888999999999999999996 9999965321 1222221111 100
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..+.....++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122345778899999999999999999999999865
No 122
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.2e-36 Score=316.64 Aligned_cols=232 Identities=25% Similarity=0.299 Sum_probs=184.8
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHH-HhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIE-GVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||+|.. .+|+.||+|.+..... ..+.+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3699999999999995 5799999999865321 1234445544 46789999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 81 GELFFHLQRER-----SFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 99999987532 4788999999999999999999998 9999999999999999999999999987542221
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||... +.......+...... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~------------~ 215 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DTAEMYDNILNKPLR------------L 215 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC------CHHHHHHHHHcCCCC------------C
Confidence 123677899999999988999999999999999999999999642 222233333222110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMS 632 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ 632 (663)
.......+.+++.+|++.||++||++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 011234677888899999999999985
No 123
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-35 Score=302.48 Aligned_cols=248 Identities=23% Similarity=0.383 Sum_probs=194.3
Q ss_pred cccccccceEEEEEEec-CCc--EEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGT--IVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|... ++. .+|+|.++... .....+.+|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 46999999999999964 343 46888887532 2345788999999999 899999999999999999999999999
Q ss_pred CChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccc
Q 006055 450 GSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGL 518 (663)
Q Consensus 450 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~ 518 (663)
|+|.++++.... .....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCCCeEEECCCCC
Confidence 999999975431 11234789999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 519 AHLVGPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 519 a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
+....... ....+..|+|||++....++.++||||||++++||++ |..||.... ..............
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~------~~~~~~~~~~~~~~-- 230 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQGYRL-- 230 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC------HHHHHHHHhCCCCC--
Confidence 86432211 1122446999999988889999999999999999997 999985421 11222222111100
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
........++.+++.+|+..+|.+|||+.|+++.|+++.
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 ---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 011122346789999999999999999999999998874
No 124
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=297.49 Aligned_cols=242 Identities=23% Similarity=0.385 Sum_probs=206.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||+|+||.||+|. .++|+++|+|.+.. ..+-.++.+|+.+|++.+.|++|++||.|....+.++|||||..|+..
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 4679999999999998 56799999999865 345678999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC----CCCCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----SSTPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 529 (663)
++++... .++.+..+..++...++||+|||... -||||||+.|||++.+|.+||+|||.|..+.. ..+..
T Consensus 117 DI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 117 DIMRARR----KPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred HHHHHhc----CCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 9998543 57999999999999999999999986 89999999999999999999999999976533 34567
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
+|+-|||||++..-.|..++||||+|++..||..|++||......... --+.......+..+++.
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---------------FMIPT~PPPTF~KPE~W 255 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---------------FMIPTKPPPTFKKPEEW 255 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee---------------EeccCCCCCCCCChHhh
Confidence 889999999999999999999999999999999999999764332210 00111111234556777
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
..++-+++++|+-++|++|-|+.++++|-
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 88999999999999999999999988763
No 125
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-35 Score=302.28 Aligned_cols=251 Identities=22% Similarity=0.332 Sum_probs=201.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++. ..+|+.+|||.+..... ...++.+|+.+++.++|+||+++++++.+.+..+++|||+++
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 86 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence 4679999999999999 46799999998865322 235788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
++|.+++..... ....+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 87 ~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd08229 87 GDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc
Confidence 999999864321 2345899999999999999999999998 99999999999999999999999999876644322
Q ss_pred --CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 528 --PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 528 --~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
..++..|+|||++.+..++.++||||||+++|+|++|..||..... ........+..... +. ..
T Consensus 164 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~------~~----~~ 229 (267)
T cd08229 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDY------PP----LP 229 (267)
T ss_pred ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHHHHhhhhhcCCC------CC----CC
Confidence 2356679999999888889999999999999999999999864221 11122111111100 00 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.......+.+++.+|+..+|++|||+.+|++.++++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1224457888899999999999999999999999875
No 126
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.2e-36 Score=301.95 Aligned_cols=244 Identities=26% Similarity=0.423 Sum_probs=201.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.++||+|+||.||+|..+++..||||.+.......+++.+|+.+++.++|+|++++++++......++||||+++++|.+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 90 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHH
Confidence 46799999999999998888899999998777777889999999999999999999999988889999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----CCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-----TPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~ 529 (663)
++.... ...+++..+..++.+++.|+.|||+.+ ++|+||||+||++++++.+||+|||.++...... ...
T Consensus 91 ~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 165 (261)
T cd05034 91 FLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAK 165 (261)
T ss_pred HHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccC
Confidence 997643 235899999999999999999999998 9999999999999999999999999997765321 112
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+..|+|||.+.+..++.++||||||++++||++ |+.||.... .......+..... ......
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~~~~-----------~~~~~~ 228 (261)
T cd05034 166 FPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT------NREVLEQVERGYR-----------MPRPPN 228 (261)
T ss_pred CCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC-----------CCCCCC
Confidence 3346999999998889999999999999999998 999985422 1112222211100 001111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.+.++.+++.+|+..+|++||+++++++.|+.
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 24468889999999999999999999998875
No 127
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.2e-36 Score=305.71 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=195.7
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... .+..||+|.+..... ....+.+|+.+++.++|+||+++++++.+....++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLEL 90 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEec
Confidence 367999999999999964 367899998865432 245689999999999999999999999998999999999
Q ss_pred cCCCChhHhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKG--AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~ 521 (663)
+++++|.++++.... .....++|..+..++.||+.||+|||+.+ ++||||||+||+++.++ .+||+|||+++.
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceEeccCccccc
Confidence 999999999975432 12235899999999999999999999998 99999999999998765 599999999986
Q ss_pred cCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
...... ......|+|||++.+..++.++|||||||++|||++ |..||..... ...+..+......
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~~~-- 240 (277)
T cd05036 169 IYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN------QEVMEFVTGGGRL-- 240 (277)
T ss_pred cCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCCcC--
Confidence 633221 112346999999998889999999999999999997 9999864322 1222222211110
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
..+...+..+.+++.+|+..+|++||++.+|+++|++
T Consensus 241 ---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 241 ---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0112234568889999999999999999999999863
No 128
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1e-35 Score=300.75 Aligned_cols=243 Identities=27% Similarity=0.422 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.++++++|+|++++++++.. ....++||||+++|+|.
T Consensus 11 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88 (256)
T ss_pred eeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence 468999999999999876 8889999986533 35678899999999999999999997654 45689999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCc
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVA 532 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~ 532 (663)
++++... ...+++..+..++.+++.||+|||+++ ++||||||+||++++++.+||+|||+++...... ....+.
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 163 (256)
T cd05082 89 DYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163 (256)
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCCCcEEecCCccceeccccCCCCccce
Confidence 9987543 235889999999999999999999998 9999999999999999999999999987654332 223445
Q ss_pred cccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHH
Q 006055 533 GYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMV 611 (663)
Q Consensus 533 ~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 611 (663)
.|+|||++.+..++.++|||||||++|||++ |+.||... +.......+.. ..... .....+.
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~----------~~~~~~~ 226 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVVPRVEK-GYKMD----------APDGCPP 226 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhc-CCCCC----------CCCCCCH
Confidence 7999999988889999999999999999998 99998532 22222222211 11111 1112345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 612 QLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 612 ~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.+.+++.+|+..+|++|||+.++++.|+++
T Consensus 227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 227 VVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 678889999999999999999999999864
No 129
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.6e-36 Score=306.49 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=188.1
Q ss_pred ccccccceEEEEEEec---CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 377 VLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.||+|+||.||+|... ++..+|+|.++.... ....+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999854 346799998875532 23578889999999999999999999999889999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.++++..........++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 999997644323345678888899999999999999998 9999999999999999999999999997543322
Q ss_pred -CCCCCccccCccccCCC-------CCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 -TPNRVAGYRAPEVTDPC-------KVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~-------~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ ........ ......+
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~-~~~~~~~ 232 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ------VLTYTVRE-QQLKLPK 232 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH------HHHHHhhc-ccCCCCC
Confidence 12234569999998642 35789999999999999996 999996532211 11111111 0011111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
+.. .......+.+++..|+ .+|++|||++||++.|+
T Consensus 233 ~~~-----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 233 PRL-----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred Ccc-----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 0112235667888999 68999999999998874
No 130
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-35 Score=302.68 Aligned_cols=246 Identities=22% Similarity=0.353 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEEe-cCCc----EEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGT----IVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|.+ .+|+ .+++|.+..... ...++..|+..++.++||||+++++++. ....++++||+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~ 90 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLS 90 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeC
Confidence 47899999999999985 3454 477887754321 2356778888899999999999999875 45578999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.++++... ..+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 91 PLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 9999999997543 35899999999999999999999998 99999999999999999999999999986543221
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+....... .
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~--~--- 232 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-------HEVPDLLEKGERLA--Q--- 232 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCcCC--C---
Confidence 123456999999988889999999999999999998 9999865321 11112222111100 0
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
......++.+++.+||..+|++|||+.|+++.|..+...
T Consensus 233 -----~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 233 -----PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 111234567888899999999999999999999887643
No 131
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=6e-36 Score=302.80 Aligned_cols=238 Identities=26% Similarity=0.408 Sum_probs=190.9
Q ss_pred cccccccceEEEEEEecCCc-----------EEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEE
Q 006055 376 EVLGKGTFGTAYKAVLEMGT-----------IVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~-----------~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 444 (663)
+.||+|+||.||+|...+.. .|++|.+.........+.+|+.+++.++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46999999999999965432 58888876554436789999999999999999999999988 7889999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-------ceEEeccc
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-------EARVSDFG 517 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-------~~kl~Dfg 517 (663)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||
T Consensus 80 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEeCCCC
Confidence 9999999999997543 25889999999999999999999998 99999999999999888 79999999
Q ss_pred cccccCCCCCCCCCccccCccccCCC--CCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 518 LAHLVGPSSTPNRVAGYRAPEVTDPC--KVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 518 ~a~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
++..........+...|+|||++.+. .++.++||||||++++||++ |..||...... .+..... ... .
T Consensus 154 ~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~------~~~~~~~-~~~--~ 224 (259)
T cd05037 154 IPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS------EKERFYQ-DQH--R 224 (259)
T ss_pred cccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch------hHHHHHh-cCC--C
Confidence 99876654444556679999999876 78899999999999999999 57777553211 1111111 000 0
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
. .. .....+.+++.+|+..+|++|||+.|+++.|+
T Consensus 225 ~------~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 225 L------PM----PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C------CC----CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 00 01157888999999999999999999998763
No 132
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-35 Score=300.02 Aligned_cols=245 Identities=29% Similarity=0.435 Sum_probs=199.9
Q ss_pred cccccccceEEEEEEecC----CcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||.||+|.... +..||+|.++..... .+.+.+|++.+..++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999543 889999999866443 57889999999999999999999999998899999999999
Q ss_pred CChhHhhccCCCC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 450 GSLSALLHGNKGA----GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 450 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
++|.+++...... ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999864210 1246899999999999999999999998 999999999999999999999999999877553
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 S------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 ~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
. ...++..|+|||.+....++.++||||+|+++|||++ |..||.... .......+.....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~~------- 225 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRKGYR------- 225 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCCC-------
Confidence 2 2234567999999988889999999999999999999 699986541 1222222221110
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
...+.....++.+++.+|+..+|++||++.|++++|+
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ----LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111223457889999999999999999999999874
No 133
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.9e-36 Score=307.59 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=198.0
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||++... ....+|+|.+...... ...+.+|++++.++ +|+||+++++++......+++||
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 468999999999999853 2468999998754322 34688899999999 89999999999999999999999
Q ss_pred ccCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEe
Q 006055 446 YLTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVS 514 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~ 514 (663)
|+++|+|.++++.... .....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~~~~~~kL~ 174 (293)
T cd05053 97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVTEDHVMKIA 174 (293)
T ss_pred eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEcCCCeEEeC
Confidence 9999999999864320 12346899999999999999999999998 9999999999999999999999
Q ss_pred ccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHH
Q 006055 515 DFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIV 587 (663)
Q Consensus 515 Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 587 (663)
|||+++....... ...+..|+|||++.+..++.++|||||||++|||++ |..||.... .........
T Consensus 175 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~ 248 (293)
T cd05053 175 DFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VEELFKLLK 248 (293)
T ss_pred ccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC------HHHHHHHHH
Confidence 9999987654321 113356999999988889999999999999999998 989985422 112111111
Q ss_pred hhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 588 KDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.... ..........+.+++.+|+..+|++|||++|+++.|+++.
T Consensus 249 ~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 249 EGYR-----------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred cCCc-----------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1110 0111223446888999999999999999999999999874
No 134
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.3e-35 Score=300.25 Aligned_cols=242 Identities=26% Similarity=0.392 Sum_probs=194.6
Q ss_pred cccccccceEEEEEEec--C--CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE--M--GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|... + +..+|+|.+..... ..+.+.+|+.+++.+.|+|++++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999742 2 36899999876544 4567899999999999999999999875 4568999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999997533 5899999999999999999999998 9999999999999999999999999998664432211
Q ss_pred -------CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 530 -------RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 530 -------~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+. .....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~------~~~~~~~~-~~~~~-------- 217 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG------AEVIAMLE-SGERL-------- 217 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHH-cCCcC--------
Confidence 1245999999998889999999999999999998 9999865321 12222111 11110
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
..+......+.+++.+|+..+|++||++.++++.|+++.
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 111223356788999999999999999999999998764
No 135
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-36 Score=320.94 Aligned_cols=189 Identities=23% Similarity=0.355 Sum_probs=165.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++.. .+++.||+|++..... ....+.+|+.++..++|+||+++++.+.+....++||||+++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 36899999999999984 5689999999875421 234678899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 86 GDMMTLLMKKD-----TLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 99999997532 4889999999999999999999998 999999999999999999999999998754321
Q ss_pred -----------------------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 526 -----------------------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 526 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
....+|..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 012467789999999998999999999999999999999999964
No 136
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.8e-36 Score=321.13 Aligned_cols=241 Identities=22% Similarity=0.324 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|.. .+|+.||||+++... .....+.+|++++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 36799999999999995 479999999987542 2345688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 86 GDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999754 25889999999999999999999998 9999999999999999999999999997654332
Q ss_pred ------------------------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC
Q 006055 527 ------------------------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG 576 (663)
Q Consensus 527 ------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~ 576 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~---- 234 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT---- 234 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC----
Confidence 2236677999999999999999999999999999999999996532
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS-MSEVIKR 637 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt-~~ev~~~ 637 (663)
.......+.... ... ..+.......++.+++.+|+. ||++||+ ++|++++
T Consensus 235 --~~~~~~~i~~~~--~~~------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 --LQETYNKIINWK--ESL------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred --HHHHHHHHhccC--Ccc------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 112222222100 000 000011134467788889997 9999999 9999986
No 137
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.5e-36 Score=329.47 Aligned_cols=243 Identities=24% Similarity=0.314 Sum_probs=194.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC--------ccEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD--------EKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~l 442 (663)
.+.||+|+||+||+|. ..+|+.||||.+...... ...+.+|+..+..++|+|++++++.+.... ..++
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~l 116 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIAL 116 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEE
Confidence 4689999999999998 567999999998755333 346788999999999999999887765432 2579
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+++|+|.++++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 117 V~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~~~vkL~DFGls~~~ 193 (496)
T PTZ00283 117 VLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSNGLVKLGDFGFSKMY 193 (496)
T ss_pred EEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCCCCEEEEecccCeec
Confidence 9999999999999875332 2346899999999999999999999998 999999999999999999999999999865
Q ss_pred CCC------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 523 GPS------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 523 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
... ....++..|+|||++.+..++.++|||||||++|||++|+.||... +....+.........
T Consensus 194 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~------~~~~~~~~~~~~~~~---- 263 (496)
T PTZ00283 194 AATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE------NMEEVMHKTLAGRYD---- 263 (496)
T ss_pred cccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHhcCCCC----
Confidence 432 1234677899999999989999999999999999999999999642 233333333322111
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.....++.+++.+||..||++||++.+++++
T Consensus 264 -------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 264 -------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0111233467888999999999999999999875
No 138
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.1e-36 Score=320.03 Aligned_cols=241 Identities=22% Similarity=0.288 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999994 568999999986532 2234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.++++.. .++......++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 128 g~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 128 GDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred CcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence 9999998743 3778888899999999999999998 9999999999999999999999999997664321
Q ss_pred --CCCCCccccCccccCCC----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 --TPNRVAGYRAPEVTDPC----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||.... .......+........
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~------ 267 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMDHKNSLT------ 267 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC------HHHHHHHHHcCCCcCC------
Confidence 23467789999998653 47889999999999999999999996532 2222333322111000
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~ 637 (663)
.+.......++.+++.+|+..+|++ ||+++|++++
T Consensus 268 --~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 --FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111123446778888999999988 9999999876
No 139
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-35 Score=303.79 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=200.0
Q ss_pred hcccccccceEEEEEEecC-----CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLEM-----GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.... +..|++|++..... ....+.+|+.+++.++|+|++++++++.. ....++++||
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~ 90 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY 90 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence 4689999999999999765 78899999875422 24568899999999999999999998876 4678999999
Q ss_pred cCCCChhHhhccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 447 LTMGSLSALLHGNKGA---GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
+++|+|.+++...... ....+++..+..++.+++.||.|||+.+ ++||||||+||++++++.+||+|||+++.+.
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kl~d~g~~~~~~ 168 (280)
T cd05043 91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEELQVKITDNALSRDLF 168 (280)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCCCcEEECCCCCccccc
Confidence 9999999998754321 1246899999999999999999999998 9999999999999999999999999998664
Q ss_pred CCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 524 PSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 524 ~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
+.. ...++..|+|||++.+..++.++||||||+++||+++ |+.||.... ...+... ......
T Consensus 169 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~-~~~~~~---- 237 (280)
T cd05043 169 PMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID------PFEMAAY-LKDGYR---- 237 (280)
T ss_pred CCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC------HHHHHHH-HHcCCC----
Confidence 332 1223456999999988889999999999999999999 999996532 1122211 111110
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.......+.++.+++.+||..+|++|||+.|+++.|+++...
T Consensus 238 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 ------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 001112234678899999999999999999999999988653
No 140
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.9e-36 Score=306.65 Aligned_cols=239 Identities=28% Similarity=0.415 Sum_probs=188.7
Q ss_pred cccccccceEEEEEEecC--------CcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEM--------GTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
+.||+|+||+||+|.... ...||+|.+..... ..+.+.+|+.+++.++|||++++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998532 23488888765432 245688899999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc--------eEEecccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE--------ARVSDFGL 518 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~--------~kl~Dfg~ 518 (663)
+++|+|.++++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEeccccc
Confidence 99999999997543 25889999999999999999999998 999999999999987765 69999999
Q ss_pred ccccCCCCCCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCC-CCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 519 AHLVGPSSTPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGK-APTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 519 a~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
+..........++..|+|||++.+ ..++.++||||||+++|||++|. .|+..... .... ......
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~------~~~~-~~~~~~------ 221 (258)
T cd05078 155 SITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS------QKKL-QFYEDR------ 221 (258)
T ss_pred ccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH------HHHH-HHHHcc------
Confidence 887766555567778999999976 45788999999999999999985 55533211 1111 111110
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
...+.....++.+++.+|++.+|++|||++++++.|+
T Consensus 222 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 ------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0001112246788999999999999999999999863
No 141
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-35 Score=302.01 Aligned_cols=244 Identities=24% Similarity=0.450 Sum_probs=197.2
Q ss_pred hcccccccceEEEEEEec-CC---cEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG---TIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... ++ ..+|+|.++.... ....+..|+++++.++|+|++++.+++...+..++||||++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence 468999999999999854 33 3799999865422 24578899999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+++|.++++... ..+++..+..++.+++.|++|||+.+ ++||||||+||++++++.+||+|||++.........
T Consensus 90 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 90 NGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 999999997532 35899999999999999999999998 999999999999999999999999999766433211
Q ss_pred -------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 529 -------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 529 -------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
.....|+|||++....++.++|||||||++|||++ |+.||..... ......+....
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~------~~~~~~i~~~~---------- 227 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN------HEVMKAINDGF---------- 227 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH------HHHHHHHhcCC----------
Confidence 11235999999988889999999999999999998 9999964321 22222222111
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..+...+...++.+++.+|+..+|++||++.+|++.|+++
T Consensus 228 -~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111223345788999999999999999999999999876
No 142
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-35 Score=306.62 Aligned_cols=254 Identities=21% Similarity=0.370 Sum_probs=197.9
Q ss_pred hcccccccceEEEEEEec-CCc--EEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGT--IVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|..+ ++. .+++|.++... ...+.+.+|++++.++ +||||+++++++......++|+||++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 457999999999999864 343 47888887432 2245788999999999 79999999999998889999999999
Q ss_pred CCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 449 MGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 449 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
+|+|.++++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCCCeEEECCcC
Confidence 99999999753211 1135889999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 518 LAHLVGPSST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 518 ~a~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
++........ ...+..|+|||++.+..++.++|||||||++|||++ |..||.... ........... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~------~~~~~~~~~~~-~~- 236 (297)
T cd05089 165 LSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT------CAELYEKLPQG-YR- 236 (297)
T ss_pred CCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcC-CC-
Confidence 9864332111 112345999999988889999999999999999997 999996432 12222222111 00
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
..........+.+++.+|+..+|.+||+++++++.|+++......
T Consensus 237 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 237 ---------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 001112334678899999999999999999999999988765433
No 143
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-36 Score=319.33 Aligned_cols=242 Identities=21% Similarity=0.312 Sum_probs=193.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++.. .+|+.||+|.++.... ..+.+.+|+.+++.++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG 85 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence 36799999999999984 5789999999976432 345688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 86 GDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999997642 35899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ---CCCCccccCccccC------CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 528 ---PNRVAGYRAPEVTD------PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~------~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
..++..|+|||++. ...++.++|||||||++|||++|+.||.... .......+.......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~----- 228 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------SAKTYNNIMNFQRFL----- 228 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC------HHHHHHHHHcCCCcc-----
Confidence 24677899999986 4567889999999999999999999996432 122233332211100
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.......++.+++..|+. +|++||++++++++
T Consensus 229 ---~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 229 ---KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 011111123456777788997 99999999999875
No 144
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.4e-35 Score=304.03 Aligned_cols=242 Identities=23% Similarity=0.366 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||+|+||.||+|. ..+++.||+|.+..... ....+.+|++++.+++||||+++++++...+..++||||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 3679999999999998 46789999999865422 24568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TPN 529 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~ 529 (663)
|..+. .+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++....... ...
T Consensus 86 l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 86 LDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred hHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 97653 2678888999999999999999998 9999999999999999999999999997654432 234
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCC-hHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVD-LPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ........... .... . ....
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~----~~~~ 224 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-DPPV-----L----PVGQ 224 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-CCCC-----C----CCCc
Confidence 6677999999998889999999999999999999999997643322211 11111111111 0000 0 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+|+..+|++||+++|++++
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 23467888999999999999999999985
No 145
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-35 Score=305.09 Aligned_cols=252 Identities=29% Similarity=0.454 Sum_probs=193.8
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey 446 (663)
.+.||+|+||.||++.. .++..||+|.++.... ..+.+.+|+++++.++||||+++++++... ...++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 46799999999999974 3588999999875532 245788999999999999999999987543 457899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 89 LPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred cCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 99999999997532 24899999999999999999999998 9999999999999999999999999998764432
Q ss_pred CC-------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC---------CCCChHHHHHHHHhhc
Q 006055 527 TP-------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE---------EGVDLPRWVQSIVKDE 590 (663)
Q Consensus 527 ~~-------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~---------~~~~~~~~~~~~~~~~ 590 (663)
.. .....|+|||++.+..++.++|||||||+++||++|..|+...... .+..............
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 21 1123499999998888999999999999999999988775432110 0000000011111110
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
. ..........++.+++.+||..+|++|||++||++.|+.+.
T Consensus 243 ~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 243 G----------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred C----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0 00111223456889999999999999999999999998763
No 146
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-35 Score=299.25 Aligned_cols=242 Identities=25% Similarity=0.376 Sum_probs=195.7
Q ss_pred cccccccceEEEEEEecC--Cc--EEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLEM--GT--IVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~--g~--~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|++|.||+|.+.+ ++ .||+|.+..... ..+.+.+|+..+++++|+||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998543 33 699999876644 35678999999999999999999999988 888999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.+++..... ..+++.....++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999976431 45899999999999999999999998 99999999999999999999999999987654211
Q ss_pred -----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 528 -----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 528 -----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
..++.+|+|||++.+..++.++|||||||+++||++ |+.||.... .......+......
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~--------- 219 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKIDKEGER--------- 219 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhcCCc---------
Confidence 224457999999998889999999999999999999 999986432 12222222211110
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
.......+..+.+++.+|+..+|++||++.|+++.|.
T Consensus 220 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 -LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0111223457888999999999999999999999875
No 147
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.7e-35 Score=299.04 Aligned_cols=241 Identities=25% Similarity=0.433 Sum_probs=198.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||++.+.+++.+|+|.++........+.+|+++++.++|||++++++++......++||||+++++|.+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 88 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSD 88 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHH
Confidence 46799999999999998778899999988766667889999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
+++... ..+++..+..++.+++.|+.|||+.+ ++||||||+||+++.++.++|+|||.++....... ..
T Consensus 89 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05112 89 YLRAQR----GKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK 162 (256)
T ss_pred HHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCc
Confidence 997543 24789999999999999999999998 99999999999999999999999999876543221 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+.+|+|||++.+..++.++||||||+++|||++ |+.||.... ....+...... . ....+ ..
T Consensus 163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~-~--~~~~~--------~~ 225 (256)
T cd05112 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVETINAG-F--RLYKP--------RL 225 (256)
T ss_pred cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHhCC-C--CCCCC--------CC
Confidence 3457999999998889999999999999999998 999986422 11222222111 0 00011 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
....+.+++.+|+..+|++|||++|++++|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 234688899999999999999999999987
No 148
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-35 Score=298.80 Aligned_cols=244 Identities=28% Similarity=0.447 Sum_probs=200.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|... |+.||+|.++......+.+.+|+.+++.++|+|++++++++.+....++||||+++++|.+
T Consensus 11 ~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 89 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD 89 (256)
T ss_pred eeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHH
Confidence 468999999999999876 8899999998765556789999999999999999999999998889999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-CCCCcc
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-PNRVAG 533 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~ 533 (663)
++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++....... ......
T Consensus 90 ~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 164 (256)
T cd05039 90 YLRSRG---RAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK 164 (256)
T ss_pred HHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCCCCEEEcccccccccccccccCCCccc
Confidence 997543 235899999999999999999999998 99999999999999999999999999987643322 223456
Q ss_pred ccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHH
Q 006055 534 YRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQ 612 (663)
Q Consensus 534 y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 612 (663)
|+|||++.+..++.++||||||++++||++ |..||.... ... +........... .+...+.+
T Consensus 165 ~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~-~~~~~~~~~~~~----------~~~~~~~~ 227 (256)
T cd05039 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKD-VVPHVEKGYRME----------APEGCPPE 227 (256)
T ss_pred ccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC------HHH-HHHHHhcCCCCC----------CccCCCHH
Confidence 999999988888999999999999999997 999986431 111 111111111100 11123456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 613 LLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 613 l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
+.+++.+|+..+|++|||++|++++|+.+
T Consensus 228 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 228 VYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 78899999999999999999999999753
No 149
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-35 Score=299.75 Aligned_cols=244 Identities=27% Similarity=0.400 Sum_probs=189.5
Q ss_pred cccccccceEEEEEEec----CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~ 448 (663)
+.||+|+||.||+|... ++..||+|++.... .....+.+|+.+++.++|||++++++++.. +...++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36999999999999853 24679999886432 224578889999999999999999998764 445789999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.++++... ..+++..+..++.+++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999997533 23677888899999999999999998 9999999999999999999999999997543211
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhC-CCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 ------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTG-KAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
....+..|+|||++.+..++.++|||||||++|||++| ..||... +..............
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~------~~~~~~~~~~~~~~~------- 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV------DSFDITVYLLQGRRL------- 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHhcCCCC-------
Confidence 11234569999999888899999999999999999995 4555432 122222222211110
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
......+..+.+++.+||..+|++||++.|+++.|+++.
T Consensus 222 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 ----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 001112346888999999999999999999999999874
No 150
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-35 Score=308.49 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEec-CCc--EEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGT--IVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|..+ ++. .+|+|.++... .....+.+|++++.++ +|+||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 91 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence 468999999999999954 454 46888776432 2345788999999999 89999999999999999999999999
Q ss_pred CCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 449 MGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 449 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
+|+|.++++..... ....+++..++.++.|++.|++|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~~~~kl~dfg 169 (303)
T cd05088 92 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFG 169 (303)
T ss_pred CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCCCcEEeCccc
Confidence 99999999754311 1235889999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 518 LAHLVGPSST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 518 ~a~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
+++....... ...+..|+|||++.+..++.++|||||||++|||+| |..||..... ......... ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~-~~~- 241 (303)
T cd05088 170 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ-GYR- 241 (303)
T ss_pred cCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh------HHHHHHHhc-CCc-
Confidence 9864322111 112446999999988888999999999999999998 9999864321 111211111 100
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.........++.+++.+|+..+|++||++++++++|+++.....
T Consensus 242 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 242 ---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 00111123467889999999999999999999999998765544
No 151
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.1e-36 Score=322.62 Aligned_cols=242 Identities=24% Similarity=0.313 Sum_probs=187.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|. ..+++.||||++..... ....+.+|++++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~g 85 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 3679999999999998 45689999999975422 234688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 86 GDMMSLLIRME-----VFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 99999987533 4788899999999999999999998 999999999999999999999999997532100
Q ss_pred -----------------------------------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHH
Q 006055 526 -----------------------------------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLL 558 (663)
Q Consensus 526 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl 558 (663)
....++..|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 012366779999999988899999999999999
Q ss_pred HHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHH
Q 006055 559 LELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAID--CSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 559 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~--C~~~dP~~RPt~~ev~~ 636 (663)
|||++|+.||...... .....+...... ......... ..++.+++.+ |+..+|..||+++|+++
T Consensus 239 ~elltG~~Pf~~~~~~------~~~~~i~~~~~~-----~~~~~~~~~---s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 239 FEMLVGQPPFLAPTPT------ETQLKVINWENT-----LHIPPQVKL---SPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHhCCCCCcCCCHH------HHHHHHHccccc-----cCCCCCCCC---CHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999999753211 111111110000 000011111 2244455545 66777778999999998
Q ss_pred H
Q 006055 637 R 637 (663)
Q Consensus 637 ~ 637 (663)
|
T Consensus 305 h 305 (381)
T cd05626 305 H 305 (381)
T ss_pred C
Confidence 6
No 152
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.4e-35 Score=298.67 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=202.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|++++++++|+|++++++++...+..++||||+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA 86 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence 367999999999999965 89999999886432 1245788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .....+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 87 ~~L~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 163 (267)
T cd08224 87 GDLSRMIKHFK-KQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CCHHHHHHHhc-ccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCCCcEEEeccceeeeccCCCccc
Confidence 99999986432 12345899999999999999999999998 9999999999999999999999999987654332
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|+|++|+.||.... .+............. .. ..
T Consensus 164 ~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~-~~---------~~ 229 (267)
T cd08224 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEKCDY-PP---------LP 229 (267)
T ss_pred ceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhhcCCC-CC---------CC
Confidence 1235667999999988889999999999999999999999985421 222222222211110 00 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.......+.+++.+|+..+|++|||+.+|+++|++++
T Consensus 230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1133456788999999999999999999999999875
No 153
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.3e-36 Score=320.74 Aligned_cols=241 Identities=22% Similarity=0.284 Sum_probs=190.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|.. .+|+.||||++.... .....+.+|++++..++||||+++++++.+....++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 36899999999999995 468999999997542 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 86 GDMMTLLMKKD-----TFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred cHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 99999997532 4899999999999999999999998 9999999999999999999999999986542210
Q ss_pred ---------------------------------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCC
Q 006055 527 ---------------------------------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAP 567 (663)
Q Consensus 527 ---------------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p 567 (663)
...+|..|+|||++....++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 12367789999999988999999999999999999999999
Q ss_pred CccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006055 568 THALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS---MSEVIKR 637 (663)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt---~~ev~~~ 637 (663)
|.... .......+........ ..... ....++.+++.+|+. +|.+|++ ++|++++
T Consensus 239 f~~~~------~~~~~~~i~~~~~~~~-----~~~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDN------PQETYRKIINWKETLQ-----FPDEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCC------HHHHHHHHHcCCCccC-----CCCCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 96432 1222222221110000 00001 122355667778885 8999998 9988875
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-35 Score=308.13 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=198.7
Q ss_pred hcccccccceEEEEEEec--------CCcEEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE--------MGTIVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
.+.||+|+||.||++... ++..+|+|.++... ....++..|++++..+ +|+||+++++++......++|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 578999999999999742 23579999987542 2235688899999999 799999999999999999999
Q ss_pred EEccCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 444 YDYLTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
|||+++|+|.++++..... ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+|
T Consensus 103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~~~~~k 180 (307)
T cd05098 103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMK 180 (307)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHHheEEcCCCcEE
Confidence 9999999999999754321 1235899999999999999999999998 99999999999999999999
Q ss_pred EeccccccccCCCC----CC--CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSS----TP--NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~----~~--~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 585 (663)
|+|||.++...... .. ..+..|+|||++.+..++.++|||||||++|||++ |..||... ........
T Consensus 181 L~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------~~~~~~~~ 254 (307)
T cd05098 181 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEELFKL 254 (307)
T ss_pred ECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC------CHHHHHHH
Confidence 99999987654321 11 12346999999988889999999999999999998 88888532 12222222
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+ ..... ...+.....++.+++.+|+..+|++|||+.||++.|+++.+.
T Consensus 255 ~-~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 255 L-KEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred H-HcCCC----------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 11111 011122345778899999999999999999999999998654
No 155
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.3e-35 Score=302.45 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=186.9
Q ss_pred ccccccceEEEEEEecC---CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 377 VLGKGTFGTAYKAVLEM---GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.||+|+||.||+|...+ ...+|+|.+..... ....+.+|++.++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 59999999999997433 45788888764422 23568889999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.+++...........++.....++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 999997654332334578888999999999999999998 9999999999999999999999999987543321
Q ss_pred -CCCCCccccCccccCC-------CCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 -TPNRVAGYRAPEVTDP-------CKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...++..|+|||+... ..++.++|||||||++|||++ |..||....+. ........... ....+
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~~-~~~~~ 232 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVREQD-IKLPK 232 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhccC-ccCCC
Confidence 1223456999998642 356789999999999999999 77888643211 11112222111 11111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
+ .........+.+++..|+ .||++|||++||++.|.
T Consensus 233 ~-----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 233 P-----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred C-----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 111223345667778898 59999999999999873
No 156
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.9e-36 Score=314.44 Aligned_cols=232 Identities=25% Similarity=0.306 Sum_probs=183.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHH-HhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIE-GVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+|+.||+|.+..... ....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999995 4689999999865421 1234455544 57889999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|...+... ..+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 9999888643 24788888999999999999999998 9999999999999999999999999987532221
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||... +.......+..... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~------------~~ 215 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DVSQMYDNILHKPL------------QL 215 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC------CHHHHHHHHhcCCC------------CC
Confidence 123677899999999888999999999999999999999999642 22223333222110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMS 632 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ 632 (663)
+.....++.+++.+|++.||.+||+..
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 112234677888899999999999764
No 157
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-35 Score=305.43 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=197.8
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... ....+|+|.+..... ....+.+|+.+++.++||||+++++++......++|+||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 467999999999999842 235789998865432 235688999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC
Q 006055 447 LTMGSLSALLHGNKG-------------------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~ 507 (663)
+.+|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||++++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~nill~~ 162 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARNVLVAE 162 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhheEEEcC
Confidence 999999999864321 11245889999999999999999999998 999999999999999
Q ss_pred CCceEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChH
Q 006055 508 SYEARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLP 580 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~ 580 (663)
++.+||+|||+++....... ...+..|+|||++.+..++.++||||||++++||++ |..||.... ..
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~ 236 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA------PE 236 (290)
T ss_pred CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC------HH
Confidence 99999999999976533211 123456999999988889999999999999999998 999986432 11
Q ss_pred HHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 581 RWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
... ........ .........++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 237 ~~~-~~~~~~~~----------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 RLF-NLLKTGYR----------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHH-HHHhCCCC----------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 211 11211110 01112233468889999999999999999999999998754
No 158
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=289.45 Aligned_cols=241 Identities=24% Similarity=0.327 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|.|+.||+.. .++|+.+|+|++... ..+-+++.+|+.+-+.++||||+++...+.+....++|||+|.++
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~ 95 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 95 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence 4679999999999987 668999999987644 234578899999999999999999999999999999999999999
Q ss_pred ChhH-hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC
Q 006055 451 SLSA-LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 451 sL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 526 (663)
+|.. ++++ ..+++...-..+.||++||.|+|..+ |+|||+||+|+++.. ..-+||+|||+|..+..+.
T Consensus 96 dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~ 167 (355)
T KOG0033|consen 96 ELFEDIVAR------EFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE 167 (355)
T ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence 9954 4443 24678888899999999999999998 999999999999953 3358999999999988543
Q ss_pred C---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 T---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
. ..+|++|||||++....|+..+|||+.||++|-|+.|..||.+.. -....+++++.. +|..-..+
T Consensus 168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~------~~rlye~I~~g~-----yd~~~~~w 236 (355)
T KOG0033|consen 168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYEQIKAGA-----YDYPSPEW 236 (355)
T ss_pred ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc------HHHHHHHHhccc-----cCCCCccc
Confidence 3 457899999999999999999999999999999999999997532 233444444433 22222233
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++ ..+++.+|+..||.+|.|+.|.++|
T Consensus 237 ~~is~~---Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 237 DTVTPE---AKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CcCCHH---HHHHHHHHhccChhhhccHHHHhCC
Confidence 334444 4556669999999999999998873
No 159
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-35 Score=304.83 Aligned_cols=251 Identities=23% Similarity=0.315 Sum_probs=186.6
Q ss_pred hcccccccceEEEEEEe-c-CCcEEEEEEecCccc---CHHHHHHHHHHhhcC---CCCCcccceEEEEe-----cCccE
Q 006055 375 AEVLGKGTFGTAYKAVL-E-MGTIVAVKRLKDVTI---SEREFKDKIEGVGAV---NHENLVPLRAYYYS-----MDEKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~~~~ 441 (663)
.+.||+|+||+||+|.. . +|+.||+|.++.... ....+.+|+.+++.+ +||||++++++|.. ....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 36799999999999985 3 478899999865421 234566677776655 79999999999853 34578
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+||||+. ++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 86 lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred EEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 9999997 59999887533 234899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-------c
Q 006055 522 VGPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-------W 591 (663)
Q Consensus 522 ~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~ 591 (663)
..... ...++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+..+.... +
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~------~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------DQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH------HHHHHHHHHhCCCChhhc
Confidence 65432 234567799999998888999999999999999999999999753221 1122221110 0
Q ss_pred cccc-cchhhh---cccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 592 TSEV-FDLELL---RYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 592 ~~~~-~d~~~~---~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... ...... ..... ......+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 000000 00000 1123456788999999999999999999863
No 160
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.3e-35 Score=306.88 Aligned_cols=254 Identities=21% Similarity=0.342 Sum_probs=196.1
Q ss_pred hcccccccceEEEEEEecC-----------------CcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM-----------------GTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYY 435 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 435 (663)
.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|++++++++|||++++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4689999999999988432 3468999987543 23467889999999999999999999999
Q ss_pred ecCccEEEEEccCCCChhHhhccCCCC------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC
Q 006055 436 SMDEKLLVYDYLTMGSLSALLHGNKGA------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 436 ~~~~~~lv~ey~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~ 509 (663)
.....++||||+++++|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~Nili~~~~ 167 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGKNY 167 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhceeecCCC
Confidence 999999999999999999999764421 1236899999999999999999999998 99999999999999999
Q ss_pred ceEEeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh--CCCCCccccCCCCCChHH
Q 006055 510 EARVSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT--GKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt--g~~p~~~~~~~~~~~~~~ 581 (663)
.++|+|||+++...... ....+..|+|||++.+..++.++|||||||++|||++ +..||...... ....
T Consensus 168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~ 244 (296)
T cd05051 168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ---QVIE 244 (296)
T ss_pred ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH---HHHH
Confidence 99999999987653322 1223457999999988889999999999999999998 67777543211 1111
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.+............ .......+.++.+++.+|++.||++|||+.|+++.|++
T Consensus 245 ~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 245 NAGHFFRDDGRQIY-------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHhcccccccccc-------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11111111000000 01112233578999999999999999999999998863
No 161
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.4e-36 Score=313.93 Aligned_cols=235 Identities=24% Similarity=0.273 Sum_probs=184.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHH-HhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIE-GVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||+|.. .+++.||+|.+..... ....+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3699999999999995 4678899999875421 2233444443 56788999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+.+.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 81 GELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 99999997532 4678888889999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~------------~~ 215 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKPL------------QL 215 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHhCCc------------CC
Confidence 12346778999999999899999999999999999999999996422 2222222222110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVI 635 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~ 635 (663)
.......+.+++.+|++.+|.+||++.+.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 112234577888899999999999987443
No 162
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.7e-36 Score=302.93 Aligned_cols=244 Identities=24% Similarity=0.361 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++..++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L 93 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSL 93 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcH
Confidence 46799999999999994 678999999987543 2345688899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.++++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++...... ..
T Consensus 94 ~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06646 94 QDIYHVT-----GPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF 166 (267)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEECcCccceeecccccccCcc
Confidence 9998743 24789999999999999999999998 9999999999999999999999999998664322 22
Q ss_pred CCCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 529 NRVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 529 ~~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.++..|+|||.+. ...++.++|||||||++|||++|+.||......+.. ....... +.+. ....
T Consensus 167 ~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~------~~~~~~~-----~~~~--~~~~ 233 (267)
T cd06646 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------FLMSKSN-----FQPP--KLKD 233 (267)
T ss_pred ccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh------eeeecCC-----CCCC--CCcc
Confidence 3556799999874 344678999999999999999999998643211100 0000000 0000 0011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.......+.+++.+|+..+|++||++++++++|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 112345788899999999999999999998864
No 163
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.6e-36 Score=313.86 Aligned_cols=242 Identities=22% Similarity=0.264 Sum_probs=190.2
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||++.. .+++.||+|.+.... ...+.+..|+.++..+ +|+||+++++++......++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 46899999999999874 368899999986532 1234678899999999 5899999999999889999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++|+|.+++.... .+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 85 DYVSGGEMFTHLYQRD-----NFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 9999999999987532 4889999999999999999999998 99999999999999999999999999976533
Q ss_pred CC-----CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 525 SS-----TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 525 ~~-----~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
.. ...++..|+|||++.+. .++.++|||||||++|||++|+.||....... ........+.... +
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~~~~~~~~~~~-------~ 228 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN--TQSEVSRRILKCD-------P 228 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC--CHHHHHHHHhcCC-------C
Confidence 22 12467789999999765 47889999999999999999999996432211 1111111221111 0
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
. ........+.+++.+|+..||++|| ++++++++
T Consensus 229 ~-----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 229 P-----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred C-----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 0 0111234567888899999999999 77788765
No 164
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.9e-35 Score=297.17 Aligned_cols=241 Identities=23% Similarity=0.348 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|++|.||+|.. .+++.|++|.+.... .....+.+|+++++.++|||++++++++.+....++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 36799999999999995 468999999986432 23567889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.++++... ...+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.......
T Consensus 85 ~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 85 DLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred cHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 9999997642 235889999999999999999999998 99999999999999999999999999887654322
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||+..+..++.++||||||++++||++|+.||..... ............ . ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~----------~~~ 222 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ------GALILKIIRGVF-P----------PVS 222 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCC-C----------CCc
Confidence 2355679999999988899999999999999999999999964321 111222221110 0 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......+.+++.+|+..+|++||++.+++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1334578899999999999999999999874
No 165
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-35 Score=310.88 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=199.6
Q ss_pred HhhcccccccceEEEEEEec--------CCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccE
Q 006055 373 ASAEVLGKGTFGTAYKAVLE--------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKL 441 (663)
Q Consensus 373 ~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 441 (663)
...+.||+|+||.||+|... .+..||+|.++.... ..+++.+|++++.++ +|+||++++++|......+
T Consensus 15 ~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 94 (334)
T cd05100 15 TLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 94 (334)
T ss_pred eecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceE
Confidence 34678999999999999732 123689998875422 245788999999999 8999999999999988999
Q ss_pred EEEEccCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc
Q 006055 442 LVYDYLTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE 510 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~ 510 (663)
++|||+++|+|.+++..... .....++|..+..++.|++.||.|||+.+ |+||||||+||++++++.
T Consensus 95 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 95 VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCc
Confidence 99999999999999875321 12345899999999999999999999998 999999999999999999
Q ss_pred eEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHH
Q 006055 511 ARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWV 583 (663)
Q Consensus 511 ~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 583 (663)
+||+|||+++....... ...+..|+|||++.+..++.++||||||+++|||++ |..||... +.....
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~ 246 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI------PVEELF 246 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC------CHHHHH
Confidence 99999999986543221 112345999999998889999999999999999998 88888542 222333
Q ss_pred HHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 584 QSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..+..... . ..+.....++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 247 ~~~~~~~~-~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 247 KLLKEGHR-M----------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHcCCC-C----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 22221111 0 1111234468899999999999999999999999998863
No 166
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.2e-36 Score=315.59 Aligned_cols=234 Identities=23% Similarity=0.283 Sum_probs=185.5
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHH-HhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIE-GVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||+|. ..+|+.||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 369999999999998 4579999999986542 12234555554 46779999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 9999888643 25889999999999999999999998 999999999999999999999999998753221
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||... +.......+...... +
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~------~~~~~~~~~~~~~~~---~--------- 215 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR------DVAEMYDNILHKPLV---L--------- 215 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC------CHHHHHHHHHcCCcc---C---------
Confidence 1233677899999999989999999999999999999999999642 222223333222110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEV 634 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev 634 (663)
.......+.+++.+|+..+|++||++.+.
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 01123456788889999999999988643
No 167
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-37 Score=312.98 Aligned_cols=243 Identities=28% Similarity=0.407 Sum_probs=200.4
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCc-ccC-H--HHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV-TIS-E--REFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-~~~-~--~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
..||.|+||-||-|. .++.++||||++... .++ + .++.+|+..+..++|||+|.+.|+|......|||||||-|
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG- 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG- 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-
Confidence 469999999999999 678899999998754 232 2 4689999999999999999999999999999999999965
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNR 530 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 530 (663)
+-.|++.-.+ .++.+..+..|+.+.+.||+|||+++ .||||||+.|||+++.|.|||+|||.|....+..+..|
T Consensus 111 SAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG 184 (948)
T KOG0577|consen 111 SASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG 184 (948)
T ss_pred cHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence 8888775433 36888999999999999999999998 99999999999999999999999999999999999999
Q ss_pred CccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 531 VAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 531 ~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
|+.|||||++. .+.|+-|+||||+|++..||...++|+-.+.. ...+..+.++. .+.+ ...
T Consensus 185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA------MSALYHIAQNe-------sPtL---qs~ 248 (948)
T KOG0577|consen 185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNE-------SPTL---QSN 248 (948)
T ss_pred CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH------HHHHHHHHhcC-------CCCC---CCc
Confidence 99999999974 45799999999999999999999999643211 11111222221 1111 123
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
+....+.+++..|+++-|++|||.+++++|-.-.
T Consensus 249 eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 249 EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence 4556677888899999999999999999875433
No 168
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.7e-36 Score=312.19 Aligned_cols=238 Identities=22% Similarity=0.277 Sum_probs=188.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCC-CcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHE-NLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+++.||||++.... .....+..|.+++..++|+ +|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 36799999999999995 457899999987542 2235677888899988765 57888899988899999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.+++.... .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 85 GGDLMYHIQQVG-----KFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 999999987532 4789999999999999999999998 9999999999999999999999999987532211
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+..++.++||||+||++|||++|+.||.... .......+..... .
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~~~~------------~ 219 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQSIMEHNV------------S 219 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCC------------C
Confidence 2236778999999999889999999999999999999999996432 1222222221110 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~~ 637 (663)
.+.....++.+++.+|+..||++|++. +++.++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011123467788889999999999986 566554
No 169
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.4e-35 Score=301.00 Aligned_cols=246 Identities=23% Similarity=0.388 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEe-cCCc----EEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGT----IVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|.+ .+|+ .||+|.++.... ....+.+|+.++..++|+||+++++++.. ...++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~ 90 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLM 90 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcC
Confidence 36899999999999984 4454 489999875422 24678899999999999999999999875 4578999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.++++... ..+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 91 PYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred CCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 9999999997533 35899999999999999999999998 99999999999999999999999999987643322
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...+..|+|||...+..++.++|||||||++|||++ |..||+..... .+. ..+.....
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~----~~~~~~~~-------- 229 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIP----DLLEKGER-------- 229 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----HHHHCCCc--------
Confidence 122456999999988889999999999999999998 89998643211 111 11111110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........++.+++.+||..||++||++.|+++.|+++...
T Consensus 230 --~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 230 --LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 001112344678899999999999999999999999888544
No 170
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.6e-35 Score=305.39 Aligned_cols=246 Identities=24% Similarity=0.397 Sum_probs=196.3
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||++.. .++..||||.++..... .+.+.+|+++++++ +|+||+++++++...+..++|||
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 119 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence 57899999999999973 23558999998754322 35688999999999 79999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.++++... ...+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++++|||+++.....
T Consensus 120 ~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 120 YCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred cCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 999999999997533 223899999999999999999999998 999999999999999999999999999765432
Q ss_pred CC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 ST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 ~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
.. ..++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..............
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~----- 263 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV------DSKFYKLIKEGYRM----- 263 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc------hHHHHHHHHcCCcC-----
Confidence 21 123456999999988889999999999999999998 9999864321 11111111111100
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
........++.+++.+|+..+|++|||+.|+++.|+++
T Consensus 264 -----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 -----AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00111234688899999999999999999999999875
No 171
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-35 Score=302.79 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||.||++.. .++..+|+|.++... .....+.+|+++++.++|+||+++++++......++||||+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM 89 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence 46899999999999963 246689999887543 23467999999999999999999999999988999999999
Q ss_pred CCCChhHhhccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 448 TMGSLSALLHGNKG----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 448 ~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
++|+|.++++.... .....+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCCCCEEECCCC
Confidence 99999999875421 11235899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 518 LAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 518 ~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
++....... ....+..|+|||++.+..++.++|||||||++|||++ |+.||..... ...+.......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~ 241 (280)
T cd05092 168 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------TEAIECITQGR 241 (280)
T ss_pred ceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------HHHHHHHHcCc
Confidence 997654321 1123456999999998889999999999999999998 8999864321 11122211111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.. ..+...+..+.+++.+||..||++||+++||++.|++
T Consensus 242 ~~-----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 242 EL-----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred cC-----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 10 0111233467788999999999999999999998863
No 172
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.6e-35 Score=297.62 Aligned_cols=243 Identities=23% Similarity=0.439 Sum_probs=197.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||++....+..+|+|.++........+.+|+++++.++|+|++++++++.+ ...+++|||+++|+|.+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 89 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLD 89 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHH
Confidence 46899999999999998778899999987655556778999999999999999999999877 77899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----CC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----PN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~ 529 (663)
++.... ...+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........ ..
T Consensus 90 ~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 164 (260)
T cd05073 90 FLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 164 (260)
T ss_pred HHHhCC---ccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCc
Confidence 997543 235789999999999999999999998 99999999999999999999999999876543221 12
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++....++.++|+|||||++|++++ |+.||.... .......+ ...... .....
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~-~~~~~~----------~~~~~ 227 (260)
T cd05073 165 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRAL-ERGYRM----------PRPEN 227 (260)
T ss_pred ccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC------HHHHHHHH-hCCCCC----------CCccc
Confidence 2345999999988889999999999999999999 899986432 11111111 111110 11122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
...++.+++.+|+..+|++||++.++.+.|+.
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 34568888999999999999999999999975
No 173
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3e-35 Score=302.28 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=199.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||++.. .+|+.||+|.+.... ...+.+.+|+++++.++||||+++++++......++||||+++++
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGS 89 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCC
Confidence 57899999999999994 468999999876442 235678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TP 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 528 (663)
|.++++... .+++.....++.+++.||.|||+. + ++||||||+||++++++.++|+|||++....... ..
T Consensus 90 L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~ 162 (284)
T cd06620 90 LDRIYKKGG-----PIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTF 162 (284)
T ss_pred HHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcc
Confidence 999987532 489999999999999999999974 5 9999999999999999999999999987543222 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC-----CChHHHHHHHHhhcccccccchhhhcc
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG-----VDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.++..|+|||++.+..++.++|||||||++|+|++|+.||......+. ..+..++......... .
T Consensus 163 ~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 232 (284)
T cd06620 163 VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP----------R 232 (284)
T ss_pred ccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC----------C
Confidence 456779999999888889999999999999999999999986443211 1122222222221100 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
....+...++.+++.+|+..||++|||++|++++.--+
T Consensus 233 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 233 LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 00112345688899999999999999999999975443
No 174
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.7e-36 Score=317.18 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.++...++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCC
Confidence 46799999999999995 468899999986532 2245688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++... .+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 128 g~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~ 199 (370)
T cd05621 128 GDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR 199 (370)
T ss_pred CcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence 9999999643 3788899999999999999999998 9999999999999999999999999998764322
Q ss_pred --CCCCCccccCccccCCC----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 --TPNRVAGYRAPEVTDPC----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...++..|+|||++.+. .++.++||||+||++|||++|+.||.... .......+........
T Consensus 200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~------ 267 (370)
T cd05621 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------LVGTYSKIMDHKNSLN------ 267 (370)
T ss_pred cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCcccC------
Confidence 23477889999998654 37789999999999999999999996432 2222333322111000
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~ 637 (663)
.+........+.+++..|+..++.+ ||+++|+++|
T Consensus 268 --~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 --FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1111122335566777888755544 8999999986
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.4e-35 Score=300.44 Aligned_cols=244 Identities=25% Similarity=0.462 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEec-CC---cEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG---TIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... ++ ..||||.++... ....+|..|+.+++.++||||+++++++.+....++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence 468999999999999954 33 369999987542 224679999999999999999999999999899999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.........
T Consensus 89 ~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 89 NGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred CCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 999999997533 24899999999999999999999998 999999999999999999999999998765432211
Q ss_pred ------CC---CccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 529 ------NR---VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 529 ------~~---~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
.+ +..|+|||++.+..++.++|||||||++|||++ |..||..... ......+... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~------~~~~~~i~~~-~------- 228 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------QDVINAIEQD-Y------- 228 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH------HHHHHHHHcC-C-------
Confidence 11 235999999998889999999999999999887 9999864321 1111111111 0
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..+...+.+..+.+++.+|+..+|++||+++++++.|+++
T Consensus 229 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 ---RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111123345678899999999999999999999999875
No 176
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-35 Score=303.21 Aligned_cols=247 Identities=24% Similarity=0.381 Sum_probs=196.4
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... .+..||+|.+..... ....+.+|+.++..++|+||+++++++......++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 90 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence 468999999999999853 247899999875432 235688999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKGA-----GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+++|+|.+++...... ....++|..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~~~~kl~dfg~~~~ 168 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAEDLTVKIGDFGMTRD 168 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCCCCEEECCcccchh
Confidence 9999999998753321 1234789999999999999999999998 99999999999999999999999999876
Q ss_pred cCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
..... ...++..|+|||.+.+..++.++|||||||++||+++ |..||..... ........ ......
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~~~~~-~~~~~~ 241 (277)
T cd05032 169 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN------EEVLKFVI-DGGHLD 241 (277)
T ss_pred hccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH------HHHHHHHh-cCCCCC
Confidence 54322 1223567999999988889999999999999999998 8999864221 11122111 111100
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.+.....++.+++.+|+..+|++|||+.|+++.|++
T Consensus 242 ----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 242 ----------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111224578899999999999999999999998863
No 177
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.1e-35 Score=311.71 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=194.8
Q ss_pred HhhcccccccceEEEEEEe------cCCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEecC-ccEE
Q 006055 373 ASAEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSMD-EKLL 442 (663)
Q Consensus 373 ~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~l 442 (663)
...+.||+|+||.||+|.. .+++.||||+++..... ...+.+|+.++.++ +|+||+++++++...+ ..++
T Consensus 10 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~l 89 (343)
T cd05103 10 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 89 (343)
T ss_pred cccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEE
Confidence 3467899999999999973 35789999999754322 35688899999999 6899999999887654 5789
Q ss_pred EEEccCCCChhHhhccCCCC------------------------------------------------------------
Q 006055 443 VYDYLTMGSLSALLHGNKGA------------------------------------------------------------ 462 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~------------------------------------------------------------ 462 (663)
||||+++|+|.++++.....
T Consensus 90 v~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
T cd05103 90 IVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQE 169 (343)
T ss_pred EEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhh
Confidence 99999999999998653210
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------CCCCccc
Q 006055 463 --GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------PNRVAGY 534 (663)
Q Consensus 463 --~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~y 534 (663)
....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........ ..++..|
T Consensus 170 ~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 247 (343)
T cd05103 170 DLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 247 (343)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence 0124788899999999999999999998 99999999999999999999999999976532211 1234469
Q ss_pred cCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHH
Q 006055 535 RAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQL 613 (663)
Q Consensus 535 ~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 613 (663)
+|||.+.+..++.++||||||+++|||++ |..||...... .............. .+.....++
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~~~ 311 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRMR----------APDYTTPEM 311 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc------HHHHHHHhccCCCC----------CCCCCCHHH
Confidence 99999988889999999999999999997 89998643211 11111111111000 001122367
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 614 LQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 614 ~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.+++..||..+|++|||+.|++++|+.+.+
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 889999999999999999999999998754
No 178
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.2e-35 Score=302.05 Aligned_cols=251 Identities=26% Similarity=0.390 Sum_probs=195.1
Q ss_pred hhcccccccceEEEEEEe-----cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEE
Q 006055 374 SAEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVY 444 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 444 (663)
..+.||+|+||.||++.. .++..||+|.++... .....+.+|+.+++.++|||++++++++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 87 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEE
Confidence 346799999999999973 357899999987542 2245789999999999999999999998775 5678999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++++|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 88 e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 88 EFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCCCCEEECCCcccccccc
Confidence 9999999999986432 24899999999999999999999998 99999999999999999999999999986643
Q ss_pred CCC-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC--------CC-CChHHHHHHHHh
Q 006055 525 SST-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE--------EG-VDLPRWVQSIVK 588 (663)
Q Consensus 525 ~~~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~--------~~-~~~~~~~~~~~~ 588 (663)
... ..++..|+|||++.+..++.++||||||+++|||++++.|....... .+ ......+.. ..
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-LE 240 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-HH
Confidence 321 12334599999998888999999999999999999987765321110 00 011111111 11
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
... ..+........+.+++.+|++.+|++|||++++++.|+++
T Consensus 241 ~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGK----------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCc----------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 110 0111122345788999999999999999999999999876
No 179
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1e-35 Score=311.45 Aligned_cols=238 Identities=22% Similarity=0.291 Sum_probs=188.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+++.||+|.++.... ....+..|..++..+ +|++|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 36799999999999985 4678999999875421 223456677777766 58899999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 85 GGDLMYQIQQVG-----RFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 999999886532 4889999999999999999999998 9999999999999999999999999997543221
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... .
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~~~~~------------~ 219 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNV------------A 219 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC------------C
Confidence 2346778999999999999999999999999999999999996432 1222222222111 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~~ 637 (663)
.+.....++.+++.+|++.||++|++. .++.++
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 011223467788889999999999984 566543
No 180
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-35 Score=306.79 Aligned_cols=239 Identities=25% Similarity=0.357 Sum_probs=194.0
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
+.||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++|+|++++++++....+.++||||+++++|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence 5799999999999984 5689999999875432 3467889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~ 529 (663)
++++.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 106 ~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 177 (296)
T cd06654 106 DVVTET------CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177 (296)
T ss_pred HHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEECccccchhccccccccCccc
Confidence 998642 3789999999999999999999998 9999999999999999999999999987654332 224
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ........... .. .......
T Consensus 178 ~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~~~~~~~-~~--------~~~~~~~ 242 (296)
T cd06654 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGT-PE--------LQNPEKL 242 (296)
T ss_pred CCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHHHhcCCC-CC--------CCCcccc
Confidence 566799999998888899999999999999999999999643211 11111111110 00 0111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.+++.+|+..+|++||+++|++++
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 3467888999999999999999999984
No 181
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=322.82 Aligned_cols=250 Identities=18% Similarity=0.293 Sum_probs=184.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEec--------CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSM--------DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~lv~e 445 (663)
.++||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++... ...++|||
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE 147 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVME 147 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEe
Confidence 46899999999999995 568999999885432 3345799999999999999999987532 13568999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGP 524 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~ 524 (663)
|+++ +|.+++..... ....+++.....++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 148 ~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~ 223 (440)
T PTZ00036 148 FIPQ-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA 223 (440)
T ss_pred cCCc-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeeccccchhccC
Confidence 9985 77776653211 1345899999999999999999999998 99999999999999665 699999999986643
Q ss_pred CC---CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---cccc----
Q 006055 525 SS---TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTS---- 593 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~---- 593 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+++. ....
T Consensus 224 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~------~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 224 GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV------DQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCCHHHHHH
Confidence 32 2346777999999865 46899999999999999999999999753221 111111110 0000
Q ss_pred ---cccchhh-------hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 ---EVFDLEL-------LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ---~~~d~~~-------~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+..+ .....+.....++.+++.+|+..||.+|||+.|+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000000 0000011123568899999999999999999999975
No 182
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.1e-35 Score=305.55 Aligned_cols=194 Identities=25% Similarity=0.378 Sum_probs=158.8
Q ss_pred hcccccccceEEEEEEec---CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~ 449 (663)
+.+||+|+||+||+|... +++.||+|.++.... ...+.+|+.+++.++||||+++++++... ...++||||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 357999999999999854 568899999875433 34578899999999999999999988653 457899999875
Q ss_pred CChhHhhccCCC----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE----cCCCceEEeccccccc
Q 006055 450 GSLSALLHGNKG----AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL----TKSYEARVSDFGLAHL 521 (663)
Q Consensus 450 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill----~~~~~~kl~Dfg~a~~ 521 (663)
+|.+++..... .....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 88887753221 12235899999999999999999999998 9999999999999 4567899999999987
Q ss_pred cCCCC-------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCcccc
Q 006055 522 VGPSS-------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALL 572 (663)
Q Consensus 522 ~~~~~-------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~ 572 (663)
..... ...++..|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 64321 2235677999999876 457899999999999999999999997543
No 183
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.9e-36 Score=319.25 Aligned_cols=241 Identities=22% Similarity=0.282 Sum_probs=188.4
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++. ..+|+.||||.+..... ..+.+.+|++++..++||||+++++++.+....++||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 3689999999999998 45789999999865321 235678899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 86 GDLMTMLIKYD-----TFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 99999997532 4788899999999999999999998 999999999999999999999999998632110
Q ss_pred -----------------------------------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHH
Q 006055 526 -----------------------------------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLL 558 (663)
Q Consensus 526 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl 558 (663)
....++.+|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 012367779999999988899999999999999
Q ss_pred HHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCC---CCHHHHH
Q 006055 559 LELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNR---PSMSEVI 635 (663)
Q Consensus 559 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R---Pt~~ev~ 635 (663)
|||++|+.||..... ......+..... .. ..+.......++.+++.+|+. +|.+| +++.|++
T Consensus 239 ~elltG~~Pf~~~~~------~~~~~~i~~~~~--~~------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 239 FECLIGWPPFCSENS------HETYRKIINWRE--TL------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred hhhhcCCCCCCCCCH------HHHHHHHHccCC--cc------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 999999999964321 122222221100 00 001111123356677778887 66664 6999998
Q ss_pred HH
Q 006055 636 KR 637 (663)
Q Consensus 636 ~~ 637 (663)
++
T Consensus 304 ~h 305 (377)
T cd05629 304 SH 305 (377)
T ss_pred cC
Confidence 86
No 184
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-35 Score=307.38 Aligned_cols=255 Identities=23% Similarity=0.391 Sum_probs=199.6
Q ss_pred hhcccccccceEEEEEEec--------CCcEEEEEEecCcccC--HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEE
Q 006055 374 SAEVLGKGTFGTAYKAVLE--------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 442 (663)
..+.||+|+||.||++... +...+|+|.++..... ...+..|++++..+ +||||+++++++......++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 4678999999999999732 2457999998754322 35688899999999 69999999999998888999
Q ss_pred EEEccCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCce
Q 006055 443 VYDYLTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEA 511 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~ 511 (663)
||||+++|+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~~~~~ 173 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVLVTEDNVM 173 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccceeEEEcCCCcE
Confidence 9999999999999975321 11245899999999999999999999998 9999999999999999999
Q ss_pred EEeccccccccCCCCC----C--CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHH
Q 006055 512 RVSDFGLAHLVGPSST----P--NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQ 584 (663)
Q Consensus 512 kl~Dfg~a~~~~~~~~----~--~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 584 (663)
||+|||.++....... . ..+..|+|||.+.+..++.++||||||+++|||++ |..||.... ......
T Consensus 174 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~------~~~~~~ 247 (314)
T cd05099 174 KIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP------VEELFK 247 (314)
T ss_pred EEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence 9999999986643221 1 12245999999988889999999999999999999 888885421 112222
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
.+ ...... ..+.....++.+++.+|+..+|++|||+.|+++.|.++......
T Consensus 248 ~~-~~~~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 299 (314)
T cd05099 248 LL-REGHRM----------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE 299 (314)
T ss_pred HH-HcCCCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC
Confidence 11 111110 01112334677899999999999999999999999988654433
No 185
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.6e-35 Score=302.19 Aligned_cols=242 Identities=24% Similarity=0.393 Sum_probs=191.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEec------CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSM------DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+++.||+|.+.........+..|+.++.++ +|+|++++++++... ...++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 46799999999999984 5689999999976665667889999999998 799999999998753 357899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ...+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 91 ~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~ 165 (272)
T cd06637 91 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 165 (272)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence 99999999987533 245889999999999999999999998 9999999999999999999999999997654321
Q ss_pred ----CCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 ----TPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 ----~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...++..|+|||++. ...++.++|||||||++|||++|+.||...... ... ...... .....
T Consensus 166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~-~~~~~~-~~~~~-- 236 (272)
T cd06637 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RAL-FLIPRN-PAPRL-- 236 (272)
T ss_pred ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHH-HHHhcC-CCCCC--
Confidence 234566799999985 335788999999999999999999999643211 011 011110 00000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..+|.+|||+.|++++
T Consensus 237 -------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 237 -------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 011223467888999999999999999999873
No 186
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.5e-35 Score=301.43 Aligned_cols=252 Identities=27% Similarity=0.393 Sum_probs=199.5
Q ss_pred hcccccccceEEEEEEec-----CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-----MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 445 (663)
.+.||+|+||.||++.+. ++..||||.++..... ...+.+|+++++.++|+||+++++++.. ....++|||
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence 367999999999999853 3789999999866543 6789999999999999999999999877 557899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++++|.+++.... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.++|+|||.+......
T Consensus 89 ~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 89 YLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred cCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 999999999997543 24899999999999999999999998 999999999999999999999999999876532
Q ss_pred CC-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC--------ChHHHHHHHHhhc
Q 006055 526 ST-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV--------DLPRWVQSIVKDE 590 (663)
Q Consensus 526 ~~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~--------~~~~~~~~~~~~~ 590 (663)
.. ......|+|||...+..++.++||||||++++||++|+.|+......... .........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 21 11234599999998888999999999999999999999998653221100 0011111111111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
. ..........++.+++.+|+..+|++|||+.||+++|+.+.
T Consensus 243 ~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 243 E----------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred C----------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0 01111223457889999999999999999999999998763
No 187
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.2e-35 Score=305.13 Aligned_cols=254 Identities=23% Similarity=0.364 Sum_probs=194.9
Q ss_pred hcccccccceEEEEEEec-----------------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-----------------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYY 435 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~ 435 (663)
.+.||+|+||.||++... ++..||+|.+..... ....+.+|+.+++.++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 467999999999998532 245799999875422 2467899999999999999999999999
Q ss_pred ecCccEEEEEccCCCChhHhhccCCC------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC
Q 006055 436 SMDEKLLVYDYLTMGSLSALLHGNKG------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 436 ~~~~~~lv~ey~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~ 509 (663)
.....++||||+++|+|.+++..... .....+++.....++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~Nili~~~~ 167 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRDLATRNCLVGKNY 167 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecccCChheEEEcCCC
Confidence 99999999999999999999875431 11235788999999999999999999998 99999999999999999
Q ss_pred ceEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh--CCCCCccccCCCCCChHH
Q 006055 510 EARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT--GKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt--g~~p~~~~~~~~~~~~~~ 581 (663)
.++|+|||+++....... ...+..|+|||...+..++.++|||||||++|||++ |..||......+ ...
T Consensus 168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~---~~~ 244 (296)
T cd05095 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ---VIE 244 (296)
T ss_pred CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH---HHH
Confidence 999999999976543221 122356999999888889999999999999999998 778886432211 111
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
............. . ......+...+.+++.+||+.||++||++.||++.|++
T Consensus 245 ~~~~~~~~~~~~~-~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 245 NTGEFFRDQGRQV-Y------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHhhccccc-c------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111110000 0 01112233578899999999999999999999998864
No 188
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.9e-35 Score=299.72 Aligned_cols=245 Identities=28% Similarity=0.403 Sum_probs=194.4
Q ss_pred ccccccceEEEEEEecC-------CcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 377 VLGKGTFGTAYKAVLEM-------GTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.||+|+||.||+|...+ +..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 69999999999998542 2579999886543 33567889999999999999999999999989999999999
Q ss_pred CCCChhHhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-----ceEEecccccc
Q 006055 448 TMGSLSALLHGNKGA--GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-----EARVSDFGLAH 520 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-----~~kl~Dfg~a~ 520 (663)
++|+|.++++..... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .++++|||+++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 999999999753211 2334789999999999999999999998 99999999999999887 89999999987
Q ss_pred ccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 521 LVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 521 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
...... ....+..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~-- 231 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN------QEVLQHVTAGGR-- 231 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH------HHHHHHHhcCCc--
Confidence 653321 1223467999999998889999999999999999998 9999864321 111111111110
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.......+..+.+++.+|+..+|++||+++++++.|++
T Consensus 232 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 232 ---------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 01112234567889999999999999999999999864
No 189
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.9e-35 Score=303.89 Aligned_cols=243 Identities=26% Similarity=0.313 Sum_probs=193.3
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||+||++.. .+++.||||.+...... ...+.+|+.+++.++|+|++++++.+.+.+..++||||+++|
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 85 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence 5799999999999984 57899999998654221 345778999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 86 ~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 86 DLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999886432 235889999999999999999999998 99999999999999999999999999876543322
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++||||||+++|||++|+.||....... . .......... .. .....
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~-~~~~~~~~~~-~~----------~~~~~ 226 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--K-REEVERLVKE-VQ----------EEYSE 226 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--h-HHHHHhhhhh-hh----------hhcCc
Confidence 346778999999998889999999999999999999999997532211 0 0011111100 00 00111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
....++.+++.+|+..||++||| ++|++++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 22345778888999999999999 8888884
No 190
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.7e-35 Score=297.01 Aligned_cols=240 Identities=22% Similarity=0.299 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|++|.||++.. .++++||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++|+||+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 86 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYM 86 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEEC
Confidence 46899999999999984 5689999999864321 1246888999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++++|.+++.... .+++.....++.+++.||.|||+.+ |+||||+|+||++++++.++|+|||+++......
T Consensus 87 ~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 87 PGGSVKDQLKAYG-----ALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred CCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 9999999987532 4788999999999999999999998 9999999999999999999999999987654321
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 ------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...++..|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~-------- 225 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQPTN-------- 225 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch------HHHHHHHhccCCC--------
Confidence 12245569999999998899999999999999999999999864311 1111111111110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+......+.+++.+|+..+|++|||+.|++++
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 --PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01112234467888899999999999999999875
No 191
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5e-35 Score=297.77 Aligned_cols=244 Identities=25% Similarity=0.448 Sum_probs=195.9
Q ss_pred hcccccccceEEEEEEec-C---CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-M---GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... + +..+|+|.++.... ..+.+..|+.++..++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 468999999999999853 2 34799999875432 24578999999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++.........
T Consensus 89 ~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 89 NGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 999999997543 34799999999999999999999998 999999999999999999999999999876543211
Q ss_pred -------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 529 -------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 529 -------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..+..|+|||++.+..++.++|+||||+++||+++ |+.||...... .....+. +...
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~------~~~~~~~-~~~~-------- 227 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ------DVIKAIE-EGYR-------- 227 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH------HHHHHHh-CCCc--------
Confidence 11345999999998889999999999999999887 99998653211 1111111 1110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.+.....+..+.+++.+|+..+|++||++.++++.|+++
T Consensus 228 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 --LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011112344678899999999999999999999999875
No 192
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.5e-35 Score=302.35 Aligned_cols=247 Identities=22% Similarity=0.376 Sum_probs=196.4
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... ++..||+|.+..... ..+++.+|+.+++.++|||++++++++......++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEec
Confidence 467999999999999853 478899999875432 246788999999999999999999999998899999999
Q ss_pred cCCCChhHhhccCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC
Q 006055 447 LTMGSLSALLHGNKG-----------------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~ 509 (663)
+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ ++||||||+||++++++
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~nil~~~~~ 167 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATRNCLVGENM 167 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHhheEecCCC
Confidence 999999999974321 11235789999999999999999999998 99999999999999999
Q ss_pred ceEEeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHH
Q 006055 510 EARVSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRW 582 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 582 (663)
.++|+|||+++...... ....+..|+|||.+.+..++.++|||||||++|||++ |..||... .....
T Consensus 168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~------~~~~~ 241 (288)
T cd05050 168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM------AHEEV 241 (288)
T ss_pred ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHH
Confidence 99999999987653321 1123446999999988889999999999999999998 88888542 12222
Q ss_pred HHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 583 VQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
...+..... . ........++.+++.+|+..+|++|||+.|+++.|++
T Consensus 242 ~~~~~~~~~-~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 242 IYYVRDGNV-L----------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHhcCCC-C----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 222221111 0 0111234568889999999999999999999998864
No 193
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.8e-36 Score=319.26 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=187.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|. ..+++.||||.+.... .....+.+|++++..++|+||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence 3679999999999999 4568999999986532 2245688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC-----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----- 524 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----- 524 (663)
|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 86 g~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 86 GDMMSLLIRLG-----IFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 99999997532 4788888999999999999999998 99999999999999999999999999753210
Q ss_pred ------------------------------------------CCCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHH
Q 006055 525 ------------------------------------------SSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELL 562 (663)
Q Consensus 525 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ell 562 (663)
.....++..|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 00123677899999999989999999999999999999
Q ss_pred hCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 006055 563 TGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP---SMSEVIKR 637 (663)
Q Consensus 563 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP---t~~ev~~~ 637 (663)
+|+.||..... ......+..... .. . .+.......++.+++.+|+ .+|++|+ ++.|++++
T Consensus 239 ~G~~Pf~~~~~------~~~~~~i~~~~~--~~---~---~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTP------AETQLKVINWET--TL---H---IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCH------HHHHHHHhccCc--cc---c---CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999965321 111111111100 00 0 0000112234555666665 5999999 89999886
No 194
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.1e-35 Score=294.10 Aligned_cols=241 Identities=28% Similarity=0.440 Sum_probs=195.4
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
++||+|+||.||++...+++.||+|.+..... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999976699999999876533 3467899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------ 527 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------ 527 (663)
+++.... ..+++.....++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 81 ~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKKK----NRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 9997532 24789999999999999999999998 99999999999999999999999999976542211
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...+..|+|||.+.+..++.++||||||+++|||++ |..||..... ...... ..... .....
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~------~~~~~~-~~~~~----------~~~~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN------QQTRER-IESGY----------RMPAP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH------HHHHHH-HhcCC----------CCCCC
Confidence 112345999999988889999999999999999999 8888854321 111111 11110 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
...+.++.+++.+|+..+|++|||+.|+++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 223457888999999999999999999999886
No 195
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.9e-35 Score=297.27 Aligned_cols=241 Identities=25% Similarity=0.403 Sum_probs=196.3
Q ss_pred hcccccccceEEEEEEecC-CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEM-GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|...+ ++.||+|.+..... ...+.+|+++++.++|+|++++++++.+....++++||+++++|.
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 86 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVS 86 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHH
Confidence 4579999999999999654 89999999876533 678999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~ 529 (663)
+++.... ..+++..+..++.+++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...
T Consensus 87 ~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (256)
T cd06612 87 DIMKITN----KTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI 160 (256)
T ss_pred HHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCCCcEEEcccccchhcccCcccccccc
Confidence 9986432 35899999999999999999999998 9999999999999999999999999988765432 123
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++||||||+++++|++|+.||....... ....+. ..... ........
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~------~~~~~~-~~~~~--------~~~~~~~~ 225 (256)
T cd06612 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR------AIFMIP-NKPPP--------TLSDPEKW 225 (256)
T ss_pred CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh------hhhhhc-cCCCC--------CCCchhhc
Confidence 5667999999998889999999999999999999999997532211 000000 00000 01112223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..++.+++.+|++.+|++|||++|++++
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 3567889999999999999999999873
No 196
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-36 Score=282.88 Aligned_cols=243 Identities=25% Similarity=0.359 Sum_probs=199.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cC--H----HHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---IS--E----REFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~--~----~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
.+.||+|..++|-+.. .++|..+|+|++.... .+ . +.-.+|+.+++++ .||+|+.+.++|..+...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 4679999999998877 5678999999986431 11 1 3456789999987 799999999999999999999
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
+|.|+.|.|.|+|... ..+++....+|+.|+..|++|||... |+||||||+|||+|++.++||+|||++....
T Consensus 102 Fdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 102 FDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred hhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccccceEEeccceeeccC
Confidence 9999999999999853 46899999999999999999999998 9999999999999999999999999999988
Q ss_pred CCCC---CCCCccccCccccCC------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 524 PSST---PNRVAGYRAPEVTDP------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 524 ~~~~---~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
++.. ..||+||+|||.+.. ..|+..+|+||+||++|-|+.|.+||.... -.-.++.++...+.
T Consensus 175 ~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk------QmlMLR~ImeGkyq-- 246 (411)
T KOG0599|consen 175 PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK------QMLMLRMIMEGKYQ-- 246 (411)
T ss_pred CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH------HHHHHHHHHhcccc--
Confidence 7753 458999999998753 468889999999999999999999997532 12233444443321
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
. ..++-.+......+++.+|+..||.+|.|++|+++|=
T Consensus 247 ---F---~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 247 ---F---RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred ---c---CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 1 1122234455677788899999999999999999864
No 197
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.9e-35 Score=301.36 Aligned_cols=248 Identities=21% Similarity=0.357 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.++||+|+||.||+|..+ .+..||+|.+..... ....+.+|+..++.++|+||+++++++.+....++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 468999999999998743 255899998865432 234678899999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKG-----AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+++|+|.++++.... .....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++.
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~~~~~L~Dfg~~~~ 168 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 168 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCCCcEEECcCCcccc
Confidence 999999999975321 11244678888999999999999999998 99999999999999999999999999976
Q ss_pred cCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
...... ..++..|+|||.+.+..++.++|||||||++|||++ |..||.... ..+....+.......
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~- 241 (288)
T cd05061 169 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS------NEQVLKFVMDGGYLD- 241 (288)
T ss_pred ccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCCC-
Confidence 533221 122456999999988889999999999999999998 788886422 122222222111110
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
........+.+++.+|++.+|++|||+.++++.|++.
T Consensus 242 ----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 242 ----------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1112235788999999999999999999999999875
No 198
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.8e-35 Score=332.24 Aligned_cols=253 Identities=23% Similarity=0.257 Sum_probs=197.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG 86 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG 86 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence 36899999999999995 4689999999875421 245788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCC------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 450 GSLSALLHGNKG------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 450 gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|+|.+++..... ......++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~ 164 (932)
T PRK13184 87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLFGEVVILDWGAAIFKK 164 (932)
T ss_pred CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCCCCEEEEecCcceecc
Confidence 999999864211 11234677888999999999999999998 9999999999999999999999999997652
Q ss_pred CC----------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH
Q 006055 524 PS----------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 524 ~~----------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~ 581 (663)
.. ....++..|+|||++.+..++.++|||||||++|||+||+.||....... ...
T Consensus 165 ~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k---i~~ 241 (932)
T PRK13184 165 LEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK---ISY 241 (932)
T ss_pred cccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---hhh
Confidence 10 01236778999999999999999999999999999999999996522111 100
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhhCCC
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP-SMSEVIKRIEELHPS 644 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP-t~~ev~~~L~~~~~~ 644 (663)
.. ...++.. .....+.+..+.+++.+|+..||++|| +++++.+.|+.....
T Consensus 242 -------~~---~i~~P~~--~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 242 -------RD---VILSPIE--VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred -------hh---hccChhh--ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 0001100 001122344677889999999999995 678888888877544
No 199
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-35 Score=317.54 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=185.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|.. .+++.||+|.+..... ....+.+|+++++.++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~g 85 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 85 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCC
Confidence 36899999999999994 5689999999875422 234688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~~-----~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 86 GDMMSLLIRMG-----IFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 99999987532 4788889999999999999999998 999999999999999999999999997532100
Q ss_pred -----------------------------------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHH
Q 006055 526 -----------------------------------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLL 558 (663)
Q Consensus 526 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl 558 (663)
....++..|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 012356779999999998999999999999999
Q ss_pred HHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 006055 559 LELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS---MSEVI 635 (663)
Q Consensus 559 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt---~~ev~ 635 (663)
|||++|+.||..... ......+....... ....... ...++.+++.+++ .+|++|++ ++|++
T Consensus 239 ~elltG~~Pf~~~~~------~~~~~~i~~~~~~~-----~~p~~~~---~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 239 YEMLVGQPPFLAQTP------LETQMKVINWQTSL-----HIPPQAK---LSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHhCCCCCCCCCH------HHHHHHHHccCCCc-----CCCCccc---CCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 999999999965321 11111221111000 0001111 1223445555554 49999997 88887
Q ss_pred HH
Q 006055 636 KR 637 (663)
Q Consensus 636 ~~ 637 (663)
+|
T Consensus 304 ~h 305 (382)
T cd05625 304 AH 305 (382)
T ss_pred cC
Confidence 64
No 200
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-35 Score=308.95 Aligned_cols=253 Identities=20% Similarity=0.294 Sum_probs=190.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|++++++++||||+++++++..++..++||||+++ +
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 89 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-D 89 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-C
Confidence 36799999999999984 468899999987542 2345678899999999999999999999999999999999985 8
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 90 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (309)
T cd07872 90 LKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN 163 (309)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence 888876432 34788999999999999999999998 9999999999999999999999999997643322 2
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc---cc------cccc
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW---TS------EVFD 597 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~d 597 (663)
..++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ....+........ .. ...+
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED---ELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 235667999998865 457889999999999999999999996532211 1111111100000 00 0000
Q ss_pred hhhhcc------cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRY------QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~------~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...... ........++.+++.+|+..||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000 0001123457789999999999999999999983
No 201
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.9e-35 Score=301.55 Aligned_cols=243 Identities=24% Similarity=0.290 Sum_probs=192.5
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
++||+|+||+||++.. .+++.||+|.+..... ....+.+|+++++.++|+|++++.+++..++..++||||++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence 5799999999999984 5789999999865432 2345778999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---T 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 527 (663)
+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++....... .
T Consensus 86 ~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 86 DLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred cHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 9998886432 235899999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|+||||+++|||++|+.||....... ........ ..... . ....
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~~~~~-~~~~~--~---------~~~~ 226 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREEVDRR-VLETE--E---------VYSA 226 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHh-hhccc--c---------ccCc
Confidence 345677999999998889999999999999999999999997532111 00011111 11100 0 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
....++.+++..|++.||++||+ +++++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 22345678888999999999999 6677775
No 202
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-35 Score=314.88 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecC-----ccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-----EKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e 445 (663)
.+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|+++++.++|+||+++++++.... ..++|+|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 46799999999999994 579999999986542 23467889999999999999999999998766 7899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 85 LMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred ccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 997 5788877542 35899999999999999999999998 999999999999999999999999999865432
Q ss_pred CC-----CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---hcccc---
Q 006055 526 ST-----PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK---DEWTS--- 593 (663)
Q Consensus 526 ~~-----~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 593 (663)
.. ..++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+.. .....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI------QQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH------HHHHHHHHHcCCCCHHHHH
Confidence 21 2346679999998774 4788999999999999999999999753221 11111110 00000
Q ss_pred ------------cccchh-hh-cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 ------------EVFDLE-LL-RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ------------~~~d~~-~~-~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+. .. ......+...++.+++.+|+..||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 00 000011123467889999999999999999999986
No 203
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=313.04 Aligned_cols=191 Identities=32% Similarity=0.436 Sum_probs=168.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-C-----CCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-H-----ENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||.|-+|. .++++.||||+++....--.+-..|+.+|..++ | -|+|++++||...++.+||+|.+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL 270 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL 270 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence 4689999999999999 667999999999987666667788999999986 4 38999999999999999999988
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC--ceEEeccccccccCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY--EARVSDFGLAHLVGPS 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~--~~kl~Dfg~a~~~~~~ 525 (663)
.. +|+++++.+. ...++....+.++.||+.||.+||+.+ |||+||||+||||.+-. .+||+|||.+.+....
T Consensus 271 ~~-NLYellK~n~---f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 271 ST-NLYELLKNNK---FRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred hh-hHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 66 9999998765 456999999999999999999999998 99999999999997544 6999999999877654
Q ss_pred C-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 526 S-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 526 ~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
. +...+..|+|||++.+..|+.+.||||||||+.||++|.+.|.+.
T Consensus 345 vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 345 VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 3 334455699999999999999999999999999999998877654
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.2e-35 Score=306.78 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=188.9
Q ss_pred cccccc--cceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKG--TFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G--~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
++||+| +|++||++. ..+|+.||+|++...... ...+.+|+++++.++||||++++++|..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 579999 789999998 467999999998754322 34677899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++++||+........
T Consensus 84 ~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 84 GSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 99999986432 124889999999999999999999998 999999999999999999999999865432111
Q ss_pred -------CCCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 526 -------STPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 526 -------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ......... .....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~ 231 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ------MLLEKLNGT-VPCLL 231 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH------HHHHHhcCC-ccccc
Confidence 11123455999999875 458899999999999999999999997532111 000000000 00000
Q ss_pred c-------------------hhh----------------hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 D-------------------LEL----------------LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d-------------------~~~----------------~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+ ... ...........++.+++.+|+..||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 000 0000111234578899999999999999999999984
No 205
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.3e-35 Score=304.89 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=192.8
Q ss_pred hcccccccceEEEEEEecC---------------CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEec
Q 006055 375 AEVLGKGTFGTAYKAVLEM---------------GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSM 437 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 437 (663)
.+.||+|+||.||++.... ...||+|.++.... ....+.+|++++++++|+|++++++++...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 89 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD 89 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 4679999999999987532 23589999875422 235688999999999999999999999999
Q ss_pred CccEEEEEccCCCChhHhhccCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc
Q 006055 438 DEKLLVYDYLTMGSLSALLHGNKG-------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE 510 (663)
Q Consensus 438 ~~~~lv~ey~~~gsL~~~l~~~~~-------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~ 510 (663)
...++||||+++++|.+++..... .....+++..++.++.+++.||.|||+.+ ++||||||+||++++++.
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nill~~~~~ 167 (295)
T cd05097 90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATRNCLVGNHYT 167 (295)
T ss_pred CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhhEEEcCCCc
Confidence 999999999999999999864321 11124789999999999999999999998 999999999999999999
Q ss_pred eEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh--CCCCCccccCCCCCChHHH
Q 006055 511 ARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT--GKAPTHALLNEEGVDLPRW 582 (663)
Q Consensus 511 ~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt--g~~p~~~~~~~~~~~~~~~ 582 (663)
+||+|||++........ ..++..|+|||++.+..++.++|||||||+++||++ +..||......+ ....
T Consensus 168 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~~~~ 244 (295)
T cd05097 168 IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---VIEN 244 (295)
T ss_pred EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH---HHHH
Confidence 99999999976543221 122456999999988889999999999999999998 566775432211 1111
Q ss_pred HHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 583 VQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.............. ......+..+.+++.+|++.+|++||++++|++.|++
T Consensus 245 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 245 TGEFFRNQGRQIYL-------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHhhhhccccccC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11111110000000 0011123478899999999999999999999998864
No 206
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.1e-35 Score=300.91 Aligned_cols=243 Identities=23% Similarity=0.358 Sum_probs=192.3
Q ss_pred hhcccccccceEEEEEEec-CCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 374 SAEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
..+.||+|+||.||++... ++..+|+|.+.... .....+.+|+++++.++|||++++++++...+..++||||+++++
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~ 88 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 88 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCc
Confidence 3567999999999999954 57889999886543 234568889999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|..++.... .++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 89 l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 89 VDAVMLELE----RPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 999886422 35899999999999999999999998 999999999999999999999999998654332 12
Q ss_pred CCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 PNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||++. +..++.++|||||||++|||++|+.||.... ....+.......... .
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~~~~-~------- 228 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSEPPT-L------- 228 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC------HHHHHHHHhhcCCCC-C-------
Confidence 33566799999974 3456789999999999999999999986432 111122222111110 0
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+||..+|++||++++++++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 -AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111233467888999999999999999999874
No 207
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.4e-35 Score=307.49 Aligned_cols=232 Identities=21% Similarity=0.275 Sum_probs=185.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||+||+|.. .+|+.||+|.+.... .....+..|..++..+. |++|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 36799999999999984 568999999987542 12345777888888875 5677889999988889999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~g~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 85 GGDLMYHIQQVG-----KFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 999999987532 4899999999999999999999998 9999999999999999999999999987543221
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... .
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~~~~------------~ 219 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIMEHNV------------S 219 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC------------C
Confidence 2336778999999998889999999999999999999999996532 1222233322211 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSM 631 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~ 631 (663)
.+.....++.+++.+|+..+|.+|++.
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 011223467788889999999999985
No 208
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-34 Score=294.59 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=185.1
Q ss_pred ccccccceEEEEEEecCC---cEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 377 VLGKGTFGTAYKAVLEMG---TIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~g---~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.||+|+||.||++...++ ..+++|.++... ...+.+.+|+..++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999985433 346677665432 234678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.++++..... ....++.....++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999754321 234677788899999999999999998 999999999999999999999999998643211
Q ss_pred CCCCCCccccCccccCC-------CCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 STPNRVAGYRAPEVTDP-------CKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
....++..|+|||++.. ..++.++||||||+++|||++ |..||.... ....+..+..+.. ....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~-~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREVLNHVIKDQQ-VKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhhcc-cccCC
Confidence 12234567999998743 235778999999999999997 566775322 1222333322211 12222
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
+... ......+.+++..|| .+|++||+++||++.|.
T Consensus 232 ~~~~-----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLE-----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccC-----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2211 112345677888999 67999999999998874
No 209
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.3e-35 Score=313.02 Aligned_cols=242 Identities=20% Similarity=0.284 Sum_probs=189.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 127 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 46899999999999995 468899999986432 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 128 g~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~ 199 (371)
T cd05622 128 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 199 (371)
T ss_pred CcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence 9999998743 3788888999999999999999998 9999999999999999999999999998764322
Q ss_pred --CCCCCccccCccccCCC----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 --TPNRVAGYRAPEVTDPC----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...++..|+|||++... .++.++|||||||++|||++|+.||... +.......+........
T Consensus 200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~------ 267 (371)
T cd05622 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHKNSLT------ 267 (371)
T ss_pred ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCccc------
Confidence 23477889999998653 3788999999999999999999999642 22223333332211111
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKRI 638 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~L 638 (663)
.+........+.+++..|+..++.+ ||+++|++++.
T Consensus 268 --~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 268 --FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred --CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111123345667778899744433 78999999875
No 210
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-35 Score=315.24 Aligned_cols=251 Identities=19% Similarity=0.199 Sum_probs=188.4
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||++... .++.||||.... ..+.+|++++++++|+||+++++++......++||||+. ++|.
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~ 247 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLY 247 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHH
Confidence 467999999999999954 588999996432 346789999999999999999999999999999999995 6898
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC------C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS------T 527 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------~ 527 (663)
+++.... ..++|..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 248 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 248 TYLGARL----RPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 8886432 35899999999999999999999998 9999999999999999999999999997654321 1
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC-CCCChHHHHHHHHhhccc--cccc---chhh-
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE-EGVDLPRWVQSIVKDEWT--SEVF---DLEL- 600 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~---d~~~- 600 (663)
..++..|+|||++.+..++.++|||||||++|||++|..|+-..... ........+.+++..... .+.. ...+
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 23677899999999999999999999999999999988765332211 111111112222211100 0000 0000
Q ss_pred ---h--------------cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 ---L--------------RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ---~--------------~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .+........++.+++.+|++.||.+|||+.|++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000000112357788999999999999999999984
No 211
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-35 Score=303.13 Aligned_cols=239 Identities=25% Similarity=0.358 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.+++.++|+|++++++++......++||||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCH
Confidence 46799999999999994 679999999987543 3346688899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++... .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 104 ~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 175 (297)
T cd06656 104 TDVVTET------CMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (297)
T ss_pred HHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcc
Confidence 9998642 3788999999999999999999998 9999999999999999999999999987654432 12
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||.+.+..++.++|||||||++|+|++|+.||......... ....... .. ....+..
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~------~~~~~~~-~~--------~~~~~~~ 240 (297)
T cd06656 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNG-TP--------ELQNPER 240 (297)
T ss_pred cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe------eeeccCC-CC--------CCCCccc
Confidence 3566799999999888899999999999999999999999653221100 0000000 00 0011122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
....+.+++.+|+..+|++||+++++++
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 3345678888999999999999999998
No 212
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-35 Score=290.49 Aligned_cols=242 Identities=25% Similarity=0.328 Sum_probs=196.4
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|.-|+||+++.+ ++..+|+|++.+.... -...+.|-++|+.+.||.+..+|+.+..++..++|||||+|
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpG 161 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPG 161 (459)
T ss_pred HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCC
Confidence 468999999999999965 4689999999765332 24567788999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC-----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----- 524 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----- 524 (663)
|+|..+++.+.+ ..+++..+..++.+|+-||+|||..| ||+|||||+||||-++|++.|+||.++.....
T Consensus 162 GdL~~LrqkQp~---~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 162 GDLHSLRQKQPG---KRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred ccHHHHHhhCCC---CccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 999999998763 46899999999999999999999999 99999999999999999999999998732100
Q ss_pred ----------------------------CCC---------------------------CCCCccccCccccCCCCCCCcc
Q 006055 525 ----------------------------SST---------------------------PNRVAGYRAPEVTDPCKVSQKA 549 (663)
Q Consensus 525 ----------------------------~~~---------------------------~~~~~~y~aPE~~~~~~~~~~~ 549 (663)
... ..||-.|+|||++.+...+..+
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 000 0123349999999999999999
Q ss_pred hhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCC
Q 006055 550 DVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP 629 (663)
Q Consensus 550 Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP 629 (663)
|+|+|||++|||+.|+.||.+...++ -+.+++... +.++...+.+..+.+||++.+.+||.+|.
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~~------Tl~NIv~~~----------l~Fp~~~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNKE------TLRNIVGQP----------LKFPEEPEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCchh------hHHHHhcCC----------CcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence 99999999999999999998755433 122222221 12222224456778888999999999999
Q ss_pred C----HHHHHHH
Q 006055 630 S----MSEVIKR 637 (663)
Q Consensus 630 t----~~ev~~~ 637 (663)
- +.||.+|
T Consensus 381 g~~rGA~eIK~H 392 (459)
T KOG0610|consen 381 GSKRGAAEIKRH 392 (459)
T ss_pred ccccchHHhhcC
Confidence 8 7787765
No 213
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.1e-35 Score=304.16 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=193.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++.. .++..+|+|.++.... ....+.+|++++.+++||||+++++++.++++.++||||+++++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~ 85 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 85 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCc
Confidence 46799999999999984 4688999998865422 23568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCC--CCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--STP 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--~~~ 528 (663)
|.++++.. ..+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||++...... ...
T Consensus 86 L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 86 LDQVLKKA-----GRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999753 2478999999999999999999974 5 999999999999999999999999998765432 223
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc---------------
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS--------------- 593 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 593 (663)
.++..|+|||.+.+..++.++||||||+++|||++|+.||....... ...+...........
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCccc
Confidence 45667999999988888999999999999999999999986432111 111100000000000
Q ss_pred -----cccchhhh---cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 594 -----EVFDLELL---RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 594 -----~~~d~~~~---~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+..+.... ..........++.+++.+|+..+|++|||++|++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 236 PMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred hhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 00000000 0000011334688999999999999999999999863
No 214
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.5e-35 Score=299.99 Aligned_cols=245 Identities=32% Similarity=0.453 Sum_probs=193.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHH---HHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISER---EFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||++.. .+++.||+|.+........ ...+|+..++.++||||+++++++......++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~ 83 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG 83 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence 36899999999999995 4567999999987644332 2345999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC----CC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----SS 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----~~ 526 (663)
+|.+++... ..+++..+..++.|+++||.|||+.+ |+||||||+||++++++.++|+|||.+..... ..
T Consensus 84 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~ 156 (260)
T PF00069_consen 84 SLQDYLQKN-----KPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFN 156 (260)
T ss_dssp BHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBS
T ss_pred ccccccccc-----cccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc
Confidence 999999722 34899999999999999999999998 99999999999999999999999999975311 12
Q ss_pred CCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+. +..++.++||||+|+++++|++|..||...... +.............. . ....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~~~-----~---~~~~ 225 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD---DQLEIIEKILKRPLP-----S---SSQQ 225 (260)
T ss_dssp SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH---HHHHHHHHHHHTHHH-----H---HTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccch---hhhhhhhhccccccc-----c---cccc
Confidence 234667799999998 788899999999999999999999999754110 111111111111000 0 0001
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+.+++.+|++.||++||++.+++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11112578899999999999999999999873
No 215
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.1e-35 Score=299.40 Aligned_cols=238 Identities=24% Similarity=0.364 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++......++||||+++++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGS 88 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCc
Confidence 46799999999999984 568899999887442 223578899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++... .+++..+..++.+++.|+.|||+.+ ++|+||+|+||++++++.++++|||++........
T Consensus 89 L~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 89 ALDLLKPG------PLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred HHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 99998642 4789999999999999999999998 99999999999999999999999999976543321
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++||||||++++||++|+.|+....... ....+ ..... .....
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~~~~-~~~~~----------~~~~~ 223 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR------VLFLI-PKNSP----------PTLEG 223 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh------HHhhh-hcCCC----------CCCCc
Confidence 234567999999998889999999999999999999999986432111 11111 11100 00112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....+.+++.+|+..+|++||++.+++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 234567889999999999999999999985
No 216
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-36 Score=317.34 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=208.6
Q ss_pred HHHHHHhhcccccccceEEEEEEe-cCCc----EEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCcc
Q 006055 368 EDLLRASAEVLGKGTFGTAYKAVL-EMGT----IVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEK 440 (663)
Q Consensus 368 ~~l~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 440 (663)
+|....-.++||+|+||+||+|.| +.|+ +||+|.+.... ....++.+|+..|.+++|||+++++|+|.... .
T Consensus 694 kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 694 KETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 344444467999999999999984 4443 68999887653 33678999999999999999999999997765 8
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
.||++||+.|.|.++++..+ ..+-....+.|..|||+|+.|||.+. ++||||-++|||+..-..+||.|||+++
T Consensus 773 qlvtq~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHhcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCCCeEEEEecchhh
Confidence 89999999999999998755 35778889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCC------CccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 521 LVGPSSTPNR------VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 521 ~~~~~~~~~~------~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
...+...... .+.|||-|.+....|+.++|||||||++||++| |..|++....++. ...++.+.
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-------~dlle~ge-- 917 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-------PDLLEKGE-- 917 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-------hHHHhccc--
Confidence 9887654332 234999999999999999999999999999999 9999987654332 22222211
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+...++-+..++..++.+||..|++.||+++++...+.++...
T Consensus 918 --------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 918 --------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred --------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1234455677899999999999999999999999999887543
No 217
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-35 Score=303.47 Aligned_cols=239 Identities=25% Similarity=0.378 Sum_probs=194.2
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
+.||.|+||.||+|. ..+|+.||+|.+..... ....+.+|++.++.++|||++++++++...+..++|+||+++++|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence 579999999999998 46799999999865432 3567889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----CC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST----PN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~ 529 (663)
+++... .+++..+..++.+++.|+.|||+.+ ++||||||+||+++.++.+||+|||++........ ..
T Consensus 105 ~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 176 (296)
T cd06655 105 DVVTET------CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV 176 (296)
T ss_pred HHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcC
Confidence 998642 4899999999999999999999998 99999999999999999999999999876544321 23
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.... ... .......
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~------~~~~~~~~~~~-~~~--------~~~~~~~ 241 (296)
T cd06655 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP------LRALYLIATNG-TPE--------LQNPEKL 241 (296)
T ss_pred CCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcC-Ccc--------cCCcccC
Confidence 56679999999988899999999999999999999999965321 11111111111 000 0111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.+++.+||..||++||++.+++++
T Consensus 242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 242 SPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 3467788899999999999999999874
No 218
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.2e-35 Score=308.35 Aligned_cols=182 Identities=23% Similarity=0.288 Sum_probs=156.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++......++|+||+. ++|.
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~ 144 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLY 144 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHH
Confidence 468999999999999954 5788999975432 23568899999999999999999999999999999985 5888
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---CCCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---TPNR 530 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~~ 530 (663)
+++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+
T Consensus 145 ~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~g 218 (357)
T PHA03209 145 TYLTKRS----RPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG 218 (357)
T ss_pred HHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccc
Confidence 8886432 35899999999999999999999998 9999999999999999999999999997543222 2346
Q ss_pred CccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCC
Q 006055 531 VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPT 568 (663)
Q Consensus 531 ~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~ 568 (663)
+..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 219 t~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 77899999999989999999999999999999965554
No 219
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1e-34 Score=295.98 Aligned_cols=246 Identities=24% Similarity=0.369 Sum_probs=195.5
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|...+ ...||+|...... ...+.+.+|+.+++.++|||++++++++.+ +..++||||++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~ 89 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAP 89 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCC
Confidence 4689999999999998543 2468999876543 224578999999999999999999998865 56789999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 90 LGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 999999997532 24899999999999999999999998 99999999999999999999999999976543321
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
......|+|||.+....++.++||||||++++|+++ |..||...... .....+......
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~~~~~~~~---------- 227 (270)
T cd05056 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN------DVIGRIENGERL---------- 227 (270)
T ss_pred ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHcCCcC----------
Confidence 112346999999988889999999999999999996 99999653221 111111111111
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
..+.....++.+++.+|+..+|++|||+.++++.|+++...
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01122344688889999999999999999999999988654
No 220
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-36 Score=311.73 Aligned_cols=240 Identities=25% Similarity=0.406 Sum_probs=193.9
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEec--Cc-ccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCc--cEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLK--DV-TIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDE--KLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~--~~-~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ey~ 447 (663)
++||+|+|-+||+|.. .+|-.||=-.++ +. ... ...|..|+.+|+.|+|||||+++.+|.+... .-+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 5799999999999994 457777632222 11 222 3679999999999999999999999988765 67899999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~- 525 (663)
..|+|..|+.+.+ .++......|+.||++||.|||++.|||||||||.+||+|+. .|.+||+|.|+|+.....
T Consensus 126 TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 126 TSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred cCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 9999999998754 478889999999999999999999999999999999999975 579999999999987654
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....||+.|||||... ..|.+.+||||||++++||+|+..||..- .+..++.+.+...-.+..+... .
T Consensus 201 aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-----~n~AQIYKKV~SGiKP~sl~kV-----~ 269 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-----TNPAQIYKKVTSGIKPAALSKV-----K 269 (632)
T ss_pred cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-----CCHHHHHHHHHcCCCHHHhhcc-----C
Confidence 3357999999999987 77999999999999999999999999642 3445555555544332221110 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .++.++|.+|+.. ..+|||+.|++++
T Consensus 270 --d---Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 --D---PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --C---HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 0 1466778899999 9999999999974
No 221
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-34 Score=293.19 Aligned_cols=241 Identities=22% Similarity=0.321 Sum_probs=194.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++.. .+++.+|+|.++... ...+.+.+|+.+++.++|+|++++++++.+....++||||+++|+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 84 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD 84 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence 46899999999999994 468999999986432 234678889999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ...+++.....++.+++.||.|||+.+ |+|+||||+||++++++.++++|||.++...... .
T Consensus 85 l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 85 LMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred HHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 999886433 234788999999999999999999998 9999999999999999999999999997664322 2
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|+||||+++|+|++|+.||... +.......+..... .. ...
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~------~~~~~~~~~~~~~~-~~----------~~~ 222 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN------SWKNLILKVCQGSY-KP----------LPS 222 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC------CHHHHHHHHhcCCC-CC----------CCc
Confidence 34566799999998888999999999999999999999999642 12222222222111 00 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....+.+++.+||..||++||++.|++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 223457788999999999999999999863
No 222
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.8e-35 Score=325.03 Aligned_cols=252 Identities=23% Similarity=0.273 Sum_probs=182.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC------CCcccceEEEEec-CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH------ENLVPLRAYYYSM-DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~~-~~~~lv~ey 446 (663)
.++||+|+||+||+|.. .+++.||||+++........+..|+.++..++| .+++++++++... .+.++|||+
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence 46899999999999984 568899999997543334456667777766654 4588888888764 467899998
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCC----------------
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSY---------------- 509 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~---------------- 509 (663)
+ +++|.+++... ..+++..+..|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 214 ~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~ 285 (467)
T PTZ00284 214 Y-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNRALPPDPC 285 (467)
T ss_pred c-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence 7 66888888643 2589999999999999999999974 7 99999999999998765
Q ss_pred ceEEeccccccccCCC-CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh
Q 006055 510 EARVSDFGLAHLVGPS-STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
.+||+|||.+...... ....++..|+|||++.+..++.++|||||||++|||++|+.||+.....+ ....+...+.
T Consensus 286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~---~~~~i~~~~g 362 (467)
T PTZ00284 286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE---HLHLMEKTLG 362 (467)
T ss_pred eEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHcC
Confidence 4999999988654332 23457788999999999999999999999999999999999997532211 1111111100
Q ss_pred h---cc------------------cccccchhhh----cccChH--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 589 D---EW------------------TSEVFDLELL----RYQNVE--EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 589 ~---~~------------------~~~~~d~~~~----~~~~~~--~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .+ .....++... ...... .....+.+++.+|+..||++|||++|+++|
T Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0 00 0000011000 000000 012457799999999999999999999983
No 223
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=295.81 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=205.4
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|-|+.|-+|+ .-+|.+||||++.+... +...+.+|++.|+.++|||||++|++.......|||+|.-++|+
T Consensus 24 kTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GD 103 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGD 103 (864)
T ss_pred hhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCch
Confidence 459999999999998 66899999999987643 45789999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE-cCCCceEEeccccccccCCCCCCCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL-TKSYEARVSDFGLAHLVGPSSTPNR 530 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~ 530 (663)
|++++-... ..+.+....+++.||..|+.|+|+.. ++||||||+||.+ .+-|-+||.|||++-.+.++.....
T Consensus 104 l~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 104 LFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred HHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 999986543 35899999999999999999999997 9999999999876 4567899999999988887765444
Q ss_pred ---CccccCccccCCCCCCC-cchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 531 ---VAGYRAPEVTDPCKVSQ-KADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 531 ---~~~y~aPE~~~~~~~~~-~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...|-|||++.+..|+. .+||||+||+||-|++|+.||+...+.+. +..++... +.-+
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------LTmImDCK------------YtvP 239 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------LTMIMDCK------------YTVP 239 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------hhhhhccc------------ccCc
Confidence 44499999999988764 57999999999999999999987655442 22222222 2334
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCC
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGL 652 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~ 652 (663)
.....+..++|..|+..||++|.+.+|++. ..|.+....++
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s-----~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVS-----TSWLQAGDRGL 280 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhc-----cccccCCCCCc
Confidence 556677888889999999999999999987 45554444433
No 224
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-35 Score=312.54 Aligned_cols=248 Identities=19% Similarity=0.215 Sum_probs=189.7
Q ss_pred hcccccccceEEEEEEec---CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++... .+..||||.+... +...+|+++++.++||||+++++++......++||||+. ++
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 171 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CD 171 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CC
Confidence 468999999999999743 4678999987653 345689999999999999999999999999999999986 58
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 172 l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~ 244 (392)
T PHA03207 172 LFTYVDRS-----GPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC 244 (392)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence 88888432 35899999999999999999999998 9999999999999999999999999997654332
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---ccccccc------
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTSEVF------ 596 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------ 596 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+..+.+. .......
T Consensus 245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~l~~i~~~~~~~~~~~~~~~~~~~ 321 (392)
T PHA03207 245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS---SSQLRSIIRCMQVHPLEFPQNGSTNL 321 (392)
T ss_pred cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc---HHHHHHHHHHhccCccccCCccchhH
Confidence 12467789999999998999999999999999999999999976433221 1111111111 0000000
Q ss_pred -------chhhhc-ccCh-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 -------DLELLR-YQNV-----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 -------d~~~~~-~~~~-----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...... .... .....++.+++.+|+..||++|||+.|++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 0000 0113457788899999999999999999985
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.3e-35 Score=297.16 Aligned_cols=240 Identities=23% Similarity=0.372 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC-------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS-------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|...+|+.+|||.++..... ...+.+|+++++.++|+||+++++++.+....++||||+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV 84 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence 4679999999999999888999999988643211 245888999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-- 525 (663)
++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++......
T Consensus 85 ~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 85 PGGSISSILNRFG-----PLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 9999999997532 4789999999999999999999998 999999999999999999999999998754221
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 --------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
....++..|+|||++.+..++.++||||||+++++|++|+.||..... ... ...+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~-~~~~~~~~~~~---- 227 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----LAA-MFYIGAHRGLM---- 227 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-----HHH-HHHhhhccCCC----
Confidence 112356679999999988899999999999999999999999964321 111 11111100000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+ ........++.+++.+|+..+|++||++.|+++
T Consensus 228 ~-----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 P-----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C-----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 011123446788889999999999999999986
No 226
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.9e-35 Score=309.10 Aligned_cols=236 Identities=23% Similarity=0.261 Sum_probs=182.1
Q ss_pred cccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcC---CCCCcccceEEEEecCccEEEEEccCC
Q 006055 378 LGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAV---NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 378 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
||+|+||+||+|.. .+|+.||||++..... ....+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999994 5689999999865321 112344556665554 799999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~-----~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 81 GELFWHLQKEG-----RFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred ChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 99999887532 4889999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 -TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||... +.......+..... .+..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~------~~~~~~~~i~~~~~-------~~~~-- 218 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE------DTQQMYRNIAFGKV-------RFPK-- 218 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC------CHHHHHHHHHcCCC-------CCCC--
Confidence 23467789999998754 4789999999999999999999999642 12222222221110 0000
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRP----SMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RP----t~~ev~~~ 637 (663)
.....++.+++.+|+..||++|| +++|++++
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 01233567788899999999998 56666653
No 227
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.5e-35 Score=296.38 Aligned_cols=243 Identities=22% Similarity=0.356 Sum_probs=191.2
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|. ..+++.||+|.++.... ....+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 93 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSL 93 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcH
Confidence 4679999999999998 45689999999875432 234678899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
.+++.... .+++.....++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 94 ~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 94 QDIYHVTG-----PLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 99986432 4889999999999999999999998 999999999999999999999999998765432 123
Q ss_pred CCCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 529 NRVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 529 ~~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.++..|+|||++. ...++.++|||||||++|||++|+.||....... .+............. ..
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~------~~~~~~~~~~~~~~~-------~~ 233 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR------ALFLMTKSNFQPPKL-------KD 233 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh------hHHhhhccCCCCCcc-------cc
Confidence 4667799999874 4457889999999999999999999985432111 010111111100000 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+.+++.+|+..+|++||++++++++
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 01123457788999999999999999999874
No 228
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.8e-35 Score=303.69 Aligned_cols=193 Identities=25% Similarity=0.381 Sum_probs=157.8
Q ss_pred hcccccccceEEEEEEec---CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~ 449 (663)
+.+||+|+||+||+|... ++..||+|.+..... ...+.+|+++++.++||||+++++++.. ....++||||+.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 357999999999999854 457899999875433 3457889999999999999999999854 4557899999875
Q ss_pred CChhHhhccCCC----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE----cCCCceEEeccccccc
Q 006055 450 GSLSALLHGNKG----AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL----TKSYEARVSDFGLAHL 521 (663)
Q Consensus 450 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill----~~~~~~kl~Dfg~a~~ 521 (663)
+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 78777653211 12345889999999999999999999998 9999999999999 5667899999999987
Q ss_pred cCCCC-------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 522 VGPSS-------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 522 ~~~~~-------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
..... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 64332 1235667999999876 45789999999999999999999999754
No 229
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.5e-34 Score=293.47 Aligned_cols=245 Identities=24% Similarity=0.398 Sum_probs=196.1
Q ss_pred hcccccccceEEEEEEec-CCc----EEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGT----IVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|..+ +|+ .||+|.+..... ....+.+|+..+++++|+|++++++++.. ...++||||+
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 90 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLM 90 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecC
Confidence 478999999999999853 343 589998865532 24578899999999999999999999987 7889999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 91 PLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 9999999997543 24899999999999999999999988 99999999999999999999999999987654322
Q ss_pred C------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 P------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ~------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
. ..+..|+|||.+....++.++|+||||++++|+++ |+.||+... ...+...+.....
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~~--------- 229 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP------AVEIPDLLEKGER--------- 229 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhCCCC---------
Confidence 1 12345999999988888999999999999999998 999996532 1222222211110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
...+..+..++.+++.+||..+|++||++.++++.|+++..
T Consensus 230 --~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 --LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00111123467788899999999999999999999998744
No 230
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.9e-35 Score=308.71 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=187.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||.||++.. .+|+.||||.+.... .....+.+|+.+++.++||||+++++++.... ..++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 105 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEE
Confidence 46899999999999984 568999999986542 22456788999999999999999999986543 468999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++ +|.+.++. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 106 e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 106 ELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred eCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 99976 66666642 3788889999999999999999998 99999999999999999999999999976543
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC---------CCChHHH-------HHH
Q 006055 525 SS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE---------GVDLPRW-------VQS 585 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~---------~~~~~~~-------~~~ 585 (663)
.. ...++..|+|||.+.+..++.++|||||||++|||++|+.||......+ +.....+ +..
T Consensus 176 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 22 2345677999999999999999999999999999999999997532110 0000000 000
Q ss_pred HHhhcccccccchh--hhccc------ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 586 IVKDEWTSEVFDLE--LLRYQ------NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 586 ~~~~~~~~~~~d~~--~~~~~------~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.............. ...+. .......++.+++.+|+..||++|||+.|++++-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00000000000000 00000 0001234678899999999999999999999863
No 231
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-34 Score=290.83 Aligned_cols=241 Identities=27% Similarity=0.447 Sum_probs=193.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++..++|||++++++++.. +..++||||+++++|.+
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 87 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVN 87 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCHHH
Confidence 46899999999999875 58889999986532 34678899999999999999999999865 45799999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCcc
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVAG 533 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~ 533 (663)
++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .......
T Consensus 88 ~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 162 (254)
T cd05083 88 FLRTRG---RALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162 (254)
T ss_pred HHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCce
Confidence 997543 235789999999999999999999998 9999999999999999999999999987654322 2223456
Q ss_pred ccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHH
Q 006055 534 YRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQ 612 (663)
Q Consensus 534 y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 612 (663)
|+|||++.+..++.++||||||+++|||++ |+.||.... .......+. ..... ......+..
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~-~~~~~----------~~~~~~~~~ 225 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS------LKEVKECVE-KGYRM----------EPPEGCPAD 225 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC------HHHHHHHHh-CCCCC----------CCCCcCCHH
Confidence 999999988889999999999999999998 999986432 122222221 11100 011223456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 613 LLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 613 l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
+.+++.+|+..+|++||+++++++.|++
T Consensus 226 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 226 VYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 7889999999999999999999998863
No 232
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.3e-34 Score=290.80 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|+||.||.+. ..+++.+++|.+.... ...+.+.+|++++++++|+||+++++++.+.+..+++|||+++|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence 3689999999999988 5668999999986543 22456889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ...+++..+..++.+++.||.|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 85 ~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 85 TLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 9999997543 235899999999999999999999998 9999999999999999999999999997664433
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||+..+..++.++||||||++++||++|..||... +....+..+....... ..
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~-----------~~ 222 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT------NPLNLVVKIVQGNYTP-----------VV 222 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCCC-----------Cc
Confidence 233566799999998888899999999999999999999998642 2223333333221111 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.....++.+++.+|+..+|++||+++|+++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 22344678888999999999999999999853
No 233
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.7e-35 Score=312.06 Aligned_cols=241 Identities=20% Similarity=0.273 Sum_probs=187.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++.. .+++.||+|.+.... .....+.+|+.++..++|+||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 36799999999999985 568999999987532 1235678899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 86 GDMMTLLMKKD-----TLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred ccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 99999997532 4889999999999999999999998 999999999999999999999999998644211
Q ss_pred -----------------------------------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 526 -----------------------------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 526 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 012367789999999999999999999999999999999999964
Q ss_pred ccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006055 571 LLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS---MSEVIKR 637 (663)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt---~~ev~~~ 637 (663)
.. .......+..... . +. ...... ...++.+++.+|+ .||++|++ ++|+++|
T Consensus 239 ~~------~~~~~~~i~~~~~--~-~~--~p~~~~---~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ET------PQETYRKVMNWKE--T-LV--FPPEVP---ISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CC------HHHHHHHHHcCCC--c-ee--cCCCCC---CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 32 1222222221110 0 00 000111 1234555555655 49999985 6777765
No 234
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.1e-34 Score=295.28 Aligned_cols=243 Identities=26% Similarity=0.350 Sum_probs=189.2
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
..||+|+||.||+|. ..+++.||+|.+..... ..+.+.+|+.+++.++|+||+++++++...+..++|+||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 479999999999999 45678999998875532 3467899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCCC----CC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
++++.... ....++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.++|+|||.+....... ..
T Consensus 94 ~~l~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 169 (268)
T cd06624 94 ALLRSKWG--PLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETF 169 (268)
T ss_pred HHHHHhcc--cCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccC
Confidence 99975321 111278888999999999999999998 999999999999986 6789999999987654321 12
Q ss_pred CCCccccCccccCCC--CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 529 NRVAGYRAPEVTDPC--KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~--~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
.++..|+|||++.+. .++.++||||||+++|+|++|+.||....... ...+....... . ...+
T Consensus 170 ~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~~~-------~-----~~~~ 234 (268)
T cd06624 170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMFKI-------H-----PEIP 234 (268)
T ss_pred CCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhhcc-------C-----CCCC
Confidence 356779999998654 37889999999999999999999986432111 00000000000 0 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|+..+|++|||+.|++++
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1233467788899999999999999999874
No 235
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.9e-35 Score=298.96 Aligned_cols=246 Identities=25% Similarity=0.382 Sum_probs=190.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEe-----cCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYS-----MDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~~~~lv~ey~ 447 (663)
.+.||+|+||.||++.. .+++.+|+|.+.........+..|+.++..+ +|+|++++++++.. .+..++||||+
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELC 102 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeec
Confidence 36799999999999984 5689999999876544456788999999999 69999999998853 34579999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++++|.++++.... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 103 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 179 (286)
T cd06638 103 NGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL 179 (286)
T ss_pred CCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCCCCEEEccCCceeecccCCC
Confidence 99999998864321 1245789999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 ---TPNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||++.. ..++.++||||+||++|||++|+.||...... ..+...... ......
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~-- 250 (286)
T cd06638 180 RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------RALFKIPRN-PPPTLH-- 250 (286)
T ss_pred ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh------HHHhhcccc-CCCccc--
Confidence 2346677999999753 44788999999999999999999998653211 111111000 000000
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.+.....++.+++.+|+..||++|||+.|++++.
T Consensus 251 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 251 ------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111234678899999999999999999999864
No 236
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.3e-34 Score=298.51 Aligned_cols=246 Identities=25% Similarity=0.400 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEe-cCCc----EEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGT----IVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.+ .+|. .||+|.+...... ..++.+|+.+++.++||||++++++|... ..++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~ 90 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLM 90 (303)
T ss_pred ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehhc
Confidence 46899999999999984 3454 5788988654322 34688999999999999999999998654 567999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 91 PHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCCCceEEccccccccccCccc
Confidence 9999999987533 24789999999999999999999998 99999999999999999999999999986543221
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...+..|+|||++.+..++.++||||||+++|||++ |+.||..... .............
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~------- 230 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGERL------- 230 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCCC-------
Confidence 112456999999998889999999999999999998 8999864321 1111222211100
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........+.+++..||..+|++||+++++++.|+++...
T Consensus 231 ---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 ---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00111234678889999999999999999999999987544
No 237
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.9e-34 Score=304.65 Aligned_cols=248 Identities=25% Similarity=0.328 Sum_probs=186.4
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||.||+|. ..+++.||||.+..... ..+.+.+|+++++.++||||+++++++... ...++++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 99 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVT 99 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEe
Confidence 4679999999999998 45788999999875422 235677899999999999999999987543 3468999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
|++ +++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 100 NLM-GADLNNIVKCQ------KLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 987 67998888632 4899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc--cccccc---c
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE--WTSEVF---D 597 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---d 597 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+.... ...+.. .
T Consensus 171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY------IDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHhcc
Confidence 32 2346777999999876 5688999999999999999999999964221 11111111000 000000 0
Q ss_pred --------hhhhcccC------hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 --------LELLRYQN------VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 --------~~~~~~~~------~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+..... .......+.+++.+|+..||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00112246788999999999999999999985
No 238
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.4e-34 Score=298.66 Aligned_cols=242 Identities=24% Similarity=0.359 Sum_probs=191.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+.+++.++|+|++++++++..+...++||||+++++|
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 96 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV 96 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcH
Confidence 46799999999999995 4589999999875432 245688899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
..++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 97 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 170 (292)
T cd06644 97 DAIMLELD----RGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSF 170 (292)
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCCCCEEEccCccceecccccccccee
Confidence 98876432 34899999999999999999999998 999999999999999999999999998654322 122
Q ss_pred CCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 529 NRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 529 ~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.++..|+|||++. ...++.++|||||||++|||++|+.||..... ...+......... . .
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~-~--------~ 235 (292)
T cd06644 171 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEPP-T--------L 235 (292)
T ss_pred cCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHHHhcCCCc-c--------C
Confidence 3566799999984 34467889999999999999999999864321 1111121111110 0 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..+|++||+++|++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1112233467888999999999999999999874
No 239
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.7e-34 Score=292.20 Aligned_cols=239 Identities=25% Similarity=0.404 Sum_probs=191.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 443 (663)
...||+|++|.||+|.. .+++.||+|.+...... .+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF 84 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence 35799999999999984 46899999988654211 14578899999999999999999999999999999
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|||+++++|.+++.... .+++..+..++.+++.||+|||+.+ ++||||+|+||++++++.++|+|||.++...
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 85 LEYVPGGSVAALLNNYG-----AFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEecCCCCHHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 99999999999997532 4788999999999999999999998 9999999999999999999999999987664
Q ss_pred CCC----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 524 PSS----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 524 ~~~----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~---- 227 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------LQAIFKIGEN---- 227 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------HHHHHHHhcc----
Confidence 211 12245679999999888889999999999999999999999975321 1111111110
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+ ..+......+.+++.+||+.||++||++.|++++
T Consensus 228 --~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 228 --ASP-----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --CCC-----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 000 1112234567888889999999999999999873
No 240
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.7e-35 Score=300.74 Aligned_cols=251 Identities=24% Similarity=0.312 Sum_probs=186.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcC---CCCCcccceEEEEec-----CccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAV---NHENLVPLRAYYYSM-----DEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~-----~~~~l 442 (663)
.+.||+|+||+||+|.. .+|+.||+|.++... .....+.+|+.++..+ +||||+++++++... ...++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 36799999999999984 468999999987532 1234556677766655 799999999988642 34689
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 85 v~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 85 VFEHVDQ-DLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred EEccccc-CHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccCccccc
Confidence 9999985 8988886533 234899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh-------hccc
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK-------DEWT 592 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 592 (663)
.... ...++..|+|||++.+..++.++||||+||++|||++|+.||...... .....+.. ..+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA------DQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH------HHHHHHHHHhCCCChhhCc
Confidence 5432 233567799999998888999999999999999999999998643211 11111111 0000
Q ss_pred cc------ccchhhhc--ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 593 SE------VFDLELLR--YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 593 ~~------~~d~~~~~--~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. .+...... .....+...++.+++.+|+..||++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00000000 00001223467789999999999999999999864
No 241
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4e-34 Score=289.16 Aligned_cols=241 Identities=22% Similarity=0.325 Sum_probs=193.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecC-ccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMD-EKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~ 449 (663)
.+.||+|++|.||++.. .+++.||+|++..... ..+.+.+|++++++++|+|++++++.+...+ ..++||||+++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEG 84 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCC
Confidence 46799999999999994 4578999999865432 2356888999999999999999998876443 57899999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... ...+++..+..++.+++.|++|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 85 GDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred CcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 99999997533 235899999999999999999999998 9999999999999999999999999997664322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++||||||++++||++|+.||... +.......+.... .. ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~------~~~~~~~~~~~~~-~~----------~~ 222 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK------DMNSLVYRIIEGK-LP----------PM 222 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHhcC-CC----------CC
Confidence 223566799999999988999999999999999999999998642 2222322222211 10 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..+|++|||+.+++++
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 12234568889999999999999999999874
No 242
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.7e-34 Score=291.66 Aligned_cols=238 Identities=23% Similarity=0.362 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.+++.++|+||+++++++.+....++||||+++|+
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGS 88 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCc
Confidence 35799999999999995 468999999987542 224578899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++... ++++.....++.+++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 89 L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 89 ALDLLRAG------PFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 99998642 3788899999999999999999998 99999999999999999999999999976543221
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|+|||||++|||++|+.||...... .....+ .... ......
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~~~~~~-~~~~----------~~~~~~ 223 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM------RVLFLI-PKNN----------PPTLTG 223 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH------hHhhhh-hcCC----------CCCCch
Confidence 23456699999998888899999999999999999999998653211 111111 0000 011123
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....+.+++.+||..+|++||++++++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 455678899999999999999999999886
No 243
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.2e-34 Score=292.95 Aligned_cols=239 Identities=25% Similarity=0.378 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||.|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++|+|++++++++.+....++|+||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGS 85 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCc
Confidence 35799999999999995 468999999986543 223568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.++++.. .+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++...... .
T Consensus 86 L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 86 CLDLLKPG------KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999743 5899999999999999999999998 9999999999999999999999999998775432 2
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+. ........+ .
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~-~~~~~~~~~------~--- 221 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP------MRVLFLIP-KNNPPSLEG------N--- 221 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch------HHHHHHhh-hcCCCCCcc------c---
Confidence 3355679999999988899999999999999999999999964321 11111111 111111000 0
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..+|++|||+++++++
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 033467788899999999999999999884
No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.5e-35 Score=301.23 Aligned_cols=240 Identities=23% Similarity=0.335 Sum_probs=193.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
..||+|+||.||++.. .+++.||+|.+... ....+.+.+|+.++..++|||++++++++...+..++|+||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4699999999999984 46899999998654 233567889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~ 529 (663)
+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...
T Consensus 107 ~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 178 (297)
T cd06659 107 DIVSQ------TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 178 (297)
T ss_pred HHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccCCcEEEeechhHhhccccccccccee
Confidence 98754 24789999999999999999999998 9999999999999999999999999987554321 233
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++|||||||+++||++|+.||..... ...+..+. ...... .......
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~-~~~~~~--------~~~~~~~ 243 (297)
T cd06659 179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLR-DSPPPK--------LKNAHKI 243 (297)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh-ccCCCC--------ccccCCC
Confidence 56679999999888899999999999999999999999964221 11111111 110000 0001112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
...+.+++.+|+..+|++||+++|++++-
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 34577888899999999999999999963
No 245
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.8e-34 Score=287.41 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+++.+|+|.+..... ..+.+.+|+++++.++|||++++++++.+....+++|||+++++|
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l 87 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL 87 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence 36799999999999995 4688999999876532 356789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||.+....... ..
T Consensus 88 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 88 QDIYQVTR----GPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 99987532 35889999999999999999999998 9999999999999999999999999987654322 22
Q ss_pred CCCccccCccccCCC---CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 529 NRVAGYRAPEVTDPC---KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~---~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .............. ....
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~------~~~~~~~~~~~~~~-------~~~~ 228 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM------RALFLISKSNFPPP-------KLKD 228 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccCCCc-------cccc
Confidence 345669999998776 7889999999999999999999999653211 11111111110000 0111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..+|++|||+++|+.+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 22345578899999999999999999999863
No 246
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-34 Score=289.90 Aligned_cols=241 Identities=21% Similarity=0.337 Sum_probs=197.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++. ..+|+.||+|.+.... ...+++.+|+.+++.++||||+++++++.+.+..++||||++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG 84 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence 3689999999999998 4578999999986542 22357889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 85 DLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 9999987533 234789999999999999999999998 9999999999999999999999999997664432
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||+..+..++.++|+|||||++++|++|+.||... +....+..+...... ...
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~~~~~~~~~~-----------~~~ 222 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG------NMKNLVLKIIRGSYP-----------PVS 222 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC------CHHHHHHHHhcCCCC-----------CCc
Confidence 123566799999999888999999999999999999999998642 223333333322211 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|++.+|++||++.||+++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 2234468889999999999999999999984
No 247
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-34 Score=298.33 Aligned_cols=244 Identities=26% Similarity=0.401 Sum_probs=191.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecC-----ccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMD-----EKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-----~~~lv~ey~~ 448 (663)
+.||+|+||.||++.. .+++.+|+|.+.........+.+|+.++.++ +|||++++++++...+ ..++||||++
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~ 107 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCN 107 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECC
Confidence 5799999999999995 5689999999876554567788899999988 8999999999987543 4799999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.++++.... ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.......
T Consensus 108 ~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 184 (291)
T cd06639 108 GGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184 (291)
T ss_pred CCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEeecccchhccccccc
Confidence 9999998864221 1235899999999999999999999998 9999999999999999999999999987654322
Q ss_pred --CCCCCccccCccccCCC-----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 --TPNRVAGYRAPEVTDPC-----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
...++..|+|||++... .++.++|||||||++|||++|+.||..... ...+..+.+. .....
T Consensus 185 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~------~~~~~~~~~~-~~~~~---- 253 (291)
T cd06639 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP------VKTLFKIPRN-PPPTL---- 253 (291)
T ss_pred ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH------HHHHHHHhcC-CCCCC----
Confidence 23356679999997543 367899999999999999999999864321 1111111111 11111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........+.+++.+|+..+|++||++.|++++
T Consensus 254 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 254 ----LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ----CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1112234468889999999999999999999874
No 248
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.2e-35 Score=302.07 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=189.0
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
+.||+|+||.||+|.. .+++.||+|.++.. ......+.+|+.+++.++||||+++++++......++||||++ ++|
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l 90 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 90 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCH
Confidence 6799999999999985 46899999998644 2234567889999999999999999999999999999999997 589
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 91 ~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (301)
T cd07873 91 KQYLDDCG----NSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNE 164 (301)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccccc
Confidence 88886532 24789999999999999999999998 9999999999999999999999999997643321 22
Q ss_pred CCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---cccccccc------h
Q 006055 529 NRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTSEVFD------L 598 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d------~ 598 (663)
.++..|+|||.+.+. .++.++|||||||++|||++|+.||......+ ....+...... .....+.+ .
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T cd07873 165 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKSY 241 (301)
T ss_pred ceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhcccccccc
Confidence 346679999998653 57889999999999999999999997532111 11111111000 00000000 0
Q ss_pred hhhcc--c----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 599 ELLRY--Q----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 599 ~~~~~--~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
..... . ........+.+++.+|+..||.+|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 0 00112345778899999999999999999998
No 249
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.6e-35 Score=300.88 Aligned_cols=240 Identities=25% Similarity=0.372 Sum_probs=192.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
...||+|+||.||++.. .++..||||.+.... ...+.+.+|+..++.++|+|++++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35799999999999984 468999999986543 2345688999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++... .+++..+..++.+|+.||.|||+.+ |+||||||+||++++++.++|+|||++....... ..
T Consensus 107 ~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 178 (292)
T cd06658 107 TDIVTHT------RMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL 178 (292)
T ss_pred HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence 9988532 3789999999999999999999998 9999999999999999999999999987553322 12
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++||||||+++|||++|+.||..... ...+.. +........ .....
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~-~~~~~~~~~--------~~~~~ 243 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP------LQAMRR-IRDNLPPRV--------KDSHK 243 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH-HHhcCCCcc--------ccccc
Confidence 356679999999888899999999999999999999999864211 111111 111110000 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++.+|+..||++|||++|++++
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 23357778889999999999999999985
No 250
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-35 Score=305.44 Aligned_cols=244 Identities=24% Similarity=0.382 Sum_probs=201.7
Q ss_pred hhcccccccceEEEEEEec--CCc--EEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 374 SAEVLGKGTFGTAYKAVLE--MGT--IVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
..|+||+|.||.|++|.|. +|+ .||||.++..... -.+|.+|+..|.+|+|+|++++||...+ ....+|||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 3678999999999999975 343 5899999876443 4789999999999999999999999887 6788999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
+.|+|.+.|+... ...+.......++.|||.|+.||..++ +|||||..+|+|+-....+||+|||+.+-++....
T Consensus 193 plGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred ccchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 9999999998722 345788889999999999999999998 99999999999999999999999999998876543
Q ss_pred CC-------CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 528 PN-------RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 528 ~~-------~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.. ....|+|||.+....++.++|||+|||++|||+| |..||-+.. -..+++.+-..
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~------g~qIL~~iD~~---------- 331 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR------GIQILKNIDAG---------- 331 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC------HHHHHHhcccc----------
Confidence 22 1234999999999999999999999999999999 888986532 12222222111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
.+...+..+.+++.+++..||..+|++|||+..+.+.+-.
T Consensus 332 -erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 332 -ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred -ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 1233455678899999999999999999999999865543
No 251
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.3e-34 Score=305.54 Aligned_cols=253 Identities=23% Similarity=0.284 Sum_probs=187.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||.||++.. ..++.||||++..... ....+.+|+.+++.++||||+++++++... ...++||
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 101 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEh
Confidence 46799999999999984 4689999999875422 235677899999999999999999988643 2468999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++ ++.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 102 e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 102 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred hhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 99975 67766642 3788899999999999999999998 99999999999999999999999999987654
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC---------CChHH-------HHHH
Q 006055 525 SS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG---------VDLPR-------WVQS 585 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~---------~~~~~-------~~~~ 585 (663)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||......+. ..... .+..
T Consensus 172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T cd07874 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_pred ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence 32 23467789999999998899999999999999999999999965321100 00000 0000
Q ss_pred HHhhccc-ccccchhhhc-------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 586 IVKDEWT-SEVFDLELLR-------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 586 ~~~~~~~-~~~~d~~~~~-------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....... .....+.... .........++.+++.+|+..||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 0000000000 00001123467889999999999999999999996
No 252
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=298.71 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=201.9
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCccc----CHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI----SEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|.||.||++..+ +|+.+|+|.+.+... +...+.+|+.+|+++. |||||.+.+.|.+....++|||++.+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G 120 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG 120 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence 67999999999999954 599999999976533 3468999999999998 99999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC----CceEEeccccccccCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS----YEARVSDFGLAHLVGPS 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~----~~~kl~Dfg~a~~~~~~ 525 (663)
|.|.+.+... .+++.....++.+++.|+.|||+.| |+||||||+|+|+... +.+|++|||++......
T Consensus 121 GeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~ 192 (382)
T KOG0032|consen 121 GELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG 192 (382)
T ss_pred chHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence 9999998754 2899999999999999999999998 9999999999999643 47999999999988773
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 526 S---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 ~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
. ...++++|+|||++....|+..+||||+||++|.|++|..||.+..... ....+....+ +.....
T Consensus 193 ~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~------~~~~i~~~~~-----~f~~~~ 261 (382)
T KOG0032|consen 193 ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE------IFLAILRGDF-----DFTSEP 261 (382)
T ss_pred ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH------HHHHHHcCCC-----CCCCCC
Confidence 2 3458889999999999999999999999999999999999998654321 1113333322 111112
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
+ ........+++..|+..||.+|+|+.++++| +|...
T Consensus 262 w---~~is~~akd~i~~ll~~dp~~R~ta~~~L~H-----pWi~~ 298 (382)
T KOG0032|consen 262 W---DDISESAKDFIRKLLEFDPRKRLTAAQALQH-----PWIKS 298 (382)
T ss_pred c---cccCHHHHHHHHHhcccCcccCCCHHHHhcC-----ccccC
Confidence 2 2334456677779999999999999999994 66544
No 253
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-34 Score=305.54 Aligned_cols=247 Identities=21% Similarity=0.298 Sum_probs=187.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||.||++.. ..++.||||++.... .....+.+|+.+++.++||||+++++++... ...++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~ 108 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEE
Confidence 46899999999999984 568999999987542 2245678899999999999999999987543 3469999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++ +|.+.+.. .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 109 e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 109 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred eCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 99975 77777642 3788899999999999999999998 99999999999999999999999999987654
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh-------------
Q 006055 525 SS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK------------- 588 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------- 588 (663)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..++.
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH------IDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCCCHHHHHhh
Confidence 32 23467789999999999999999999999999999999999965321 111111111
Q ss_pred ---------hcccccccchh-hhc---cc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 589 ---------DEWTSEVFDLE-LLR---YQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 589 ---------~~~~~~~~d~~-~~~---~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........... ... .+ .......++.+++.+|+..||++|||+.|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 000 00 000123467889999999999999999999986
No 254
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-34 Score=301.31 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=186.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++.. .+++.||+|.+.... ...+.+.+|+.++..++|+||+++++++.+....++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG 85 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence 36799999999999994 568999999986432 2235588899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 86 GDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred CcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 99999996532 24788999999999999999999998 99999999999999999999999999876543321
Q ss_pred ---CCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 528 ---PNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
..++..|+|||++.. ..++.++|||||||++|||++|+.||... +.......+......... .
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~------~~~~~~~~i~~~~~~~~~-~-- 230 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKEHFQF-P-- 230 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC------CHHHHHHHHHcCCCcccC-C--
Confidence 236778999999863 45788999999999999999999999642 222222232221110000 0
Q ss_pred hhcccChHHHHHHHHHHHHHcc--CCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCS--AQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~--~~dP~~RPt~~ev~~~ 637 (663)
.........+.+++.+|+ ..++..||++++++++
T Consensus 231 ----~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 231 ----PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ----CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000112234455555654 4445558999999987
No 255
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-33 Score=288.88 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC------ccE
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 441 (663)
.+.||+|+||.||+|.+. +++.||||.++..... .+++.+|+++++.++||||+++++++...+ ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 357999999999999843 4689999998765322 356888999999999999999999886543 236
Q ss_pred EEEEccCCCChhHhhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 442 LVYDYLTMGSLSALLHGNK-GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+++||+.+|+|.+++.... ......+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCCCCEEECcccccc
Confidence 8899999999998875322 122335789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 521 LVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 521 ~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
....... ......|++||.+....++.++||||||+++|||++ |+.||..... ......+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~ 235 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN------SEIYNYLIKGNRLK 235 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH------HHHHHHHHcCCcCC
Confidence 6543221 123346999999988888999999999999999999 8888864321 11111111111100
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
........+.+++.+|+..+|++||++.|+++.|+++
T Consensus 236 -----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 -----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0112335788999999999999999999999999876
No 256
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=307.66 Aligned_cols=242 Identities=26% Similarity=0.392 Sum_probs=194.8
Q ss_pred ccccccceEEEEEE-ecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 377 VLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
+||+|.||+||-|+ ..+...+|||.+..... ...-+.+||..-+.++|+|||+++|.+.+....-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 79999999999999 45567899999875533 23568899999999999999999999999998999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEeccccccccCCC----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFGLAHLVGPS----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg~a~~~~~~----~~~~ 529 (663)
+|+..-+ +..-++.+.-.+.+||++||.|||+.. |+|||||-+|||++ -.|.+||+|||-++.+..- .+..
T Consensus 662 LLrskWG--PlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 662 LLRSKWG--PLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHhccC--CCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 9986543 222377888889999999999999997 99999999999995 6789999999988765432 2345
Q ss_pred CCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 530 RVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 530 ~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
||..|||||++.. +.|+..+|||||||++.||.||++||........ . .++-+ ++. ...+.++
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----A----MFkVG----myK---vHP~iPe 802 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----A----MFKVG----MYK---VHPPIPE 802 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----h----hhhhc----cee---cCCCCcH
Confidence 6777999999965 4688999999999999999999999976543210 0 01111 110 0123355
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+...+...++.+|+.+||..||++.++++.
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 667788899999999999999999999873
No 257
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5e-34 Score=293.18 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=189.9
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|++|.||+|.. .+++.||+|.++.... ..+.+.+|+.++..++|||++++++++.++...++||||++ ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MD 84 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CC
Confidence 5799999999999995 4689999999865422 24678899999999999999999999999999999999998 68
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 85 l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (285)
T cd07861 85 LKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH 160 (285)
T ss_pred HHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence 9888865331 245899999999999999999999998 9999999999999999999999999987654322 1
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc--cc-------ccccc
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE--WT-------SEVFD 597 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~d 597 (663)
..++..|+|||++.+. .++.++|||||||+++||++|+.||...... .......... .. ....+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI------DQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHHHhCCCChhhhhcchhhHH
Confidence 2345679999988654 4688999999999999999999999753211 1111100000 00 00000
Q ss_pred hh--hhcc--c----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LE--LLRY--Q----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~--~~~~--~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. .... . .......++.+++.+|+..||++|||+++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 0000 0 001123466789999999999999999999874
No 258
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.4e-34 Score=296.56 Aligned_cols=242 Identities=26% Similarity=0.384 Sum_probs=192.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||++.. .++..||+|.+..... ..+.+.+|++++++++|+|++++++++..+...++||||+++++|
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGAL 89 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcH
Confidence 46799999999999995 4689999999865432 245788999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+....... ..
T Consensus 90 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (280)
T cd06611 90 DSIMLELE----RGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTF 163 (280)
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCCCCEEEccCccchhhccccccccee
Confidence 99987532 35899999999999999999999998 9999999999999999999999999886543321 22
Q ss_pred CCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 529 NRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 529 ~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.++..|+|||.+. ...++.++||||||+++|||++|+.||.... ....+........ .. .
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~--------~ 228 (280)
T cd06611 164 IGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN------PMRVLLKILKSEP-PT--------L 228 (280)
T ss_pred ecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC------HHHHHHHHhcCCC-CC--------c
Confidence 3567799999974 3346778999999999999999999996532 1122222211110 00 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1111233467788999999999999999999885
No 259
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.1e-34 Score=292.63 Aligned_cols=252 Identities=21% Similarity=0.324 Sum_probs=192.0
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
..||+|+||.||+|..+ +|+.||+|++.... ...+.+.+|+.+++.++|+|++++++++......++||||++++.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 86 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV 86 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence 57999999999999965 68999999986542 224568899999999999999999999999999999999999998
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 87 l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07847 87 LNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD 159 (286)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCCCcEEECccccceecCCCcccccC
Confidence 88877542 24899999999999999999999998 9999999999999999999999999998765433 1
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------------ccccc
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------------EWTSE 594 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 594 (663)
..++..|+|||++.+ ..++.++||||||++++||++|+.||......+ ........... .+...
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD---QLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChHHhhhccccccccc
Confidence 234566999999866 457889999999999999999999997533211 00001110000 00000
Q ss_pred ccchhhhcccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 595 VFDLELLRYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 595 ~~d~~~~~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+....... .......+.+++.+|+..+|++||++.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000000 01124567899999999999999999999864
No 260
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.1e-34 Score=324.03 Aligned_cols=249 Identities=19% Similarity=0.297 Sum_probs=191.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~ 448 (663)
.+.||+|+||+||+|.. .++..||+|.+...... ...+..|+.++..++||||++++++|.+. ...++||||++
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~ 97 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCD 97 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCC
Confidence 46899999999999994 56788999998754322 45688999999999999999999988654 45789999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CcceecCCCCCCEEEcCC---------------
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-----PNVSHGNIKSSNILLTKS--------------- 508 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-----~~iiHrdlk~~Nill~~~--------------- 508 (663)
+|+|.+++..... ....+++..++.|+.||+.||.|||+.+ .+|+||||||+||||+.+
T Consensus 98 gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 98 AGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 9999999875321 1235899999999999999999999854 249999999999999642
Q ss_pred --CceEEeccccccccCCCC---CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH
Q 006055 509 --YEARVSDFGLAHLVGPSS---TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 509 --~~~kl~Dfg~a~~~~~~~---~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~ 581 (663)
..+||+|||++....... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.... ....
T Consensus 177 g~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-----~~~q 251 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-----NFSQ 251 (1021)
T ss_pred CCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-----cHHH
Confidence 348999999998765432 2346788999999854 457899999999999999999999996421 2222
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhh
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK--RIEEL 641 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~--~L~~~ 641 (663)
.+.. +.... + + .......++.+++..||..+|++||++.|+++ .+..+
T Consensus 252 li~~-lk~~p-----~--l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 252 LISE-LKRGP-----D--L----PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHH-HhcCC-----C--C----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 2222 11111 0 0 01112346788999999999999999999995 34444
No 261
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.1e-34 Score=302.75 Aligned_cols=244 Identities=20% Similarity=0.265 Sum_probs=187.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||++..+ +++.||+|.+.... .....+.+|+.++..++|+||+++++++.+....++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 367999999999999954 57889999986432 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.++++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 86 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 86 GDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred CcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 99999997532 24889999999999999999999998 9999999999999999999999999987543322
Q ss_pred --CCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 --TPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
...++..|+|||++. ...++.++|||||||++|||++|+.||... +.......+.........
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~------~~~~~~~~i~~~~~~~~~---- 229 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKERFQF---- 229 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC------CHHHHHHHHhCCCccccC----
Confidence 134677899999986 345788999999999999999999999642 223333333322110000
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCC--CCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYP--DNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP--~~RPt~~ev~~~ 637 (663)
.........++.+++.+|+..++ ..|++++|++++
T Consensus 230 ---p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 230 ---PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ---CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 01111223455666667665444 447899999887
No 262
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.3e-34 Score=287.57 Aligned_cols=242 Identities=29% Similarity=0.446 Sum_probs=196.2
Q ss_pred hcccccccceEEEEEEecC-----CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLEM-----GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||++...+ +..||+|.+..... ..+.+.+|++++..++|+||+++++++.+.+..+++|||+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 3679999999999999643 38899999976543 3568999999999999999999999999989999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 84 EGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred CCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999975431 12899999999999999999999998 99999999999999999999999999977654321
Q ss_pred -----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 528 -----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 528 -----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
..++..|+|||.+.+..++.++||||+|+++++|++ |..||... +.......+......
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~------~~~~~~~~~~~~~~~--------- 223 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM------SNEEVLEYLKKGYRL--------- 223 (258)
T ss_pred cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhcCCCC---------
Confidence 124467999999988889999999999999999998 78887642 222222222221110
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
........++.+++.+|+..+|++|||+.|+++.|
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 --PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01112345788899999999999999999998864
No 263
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.1e-33 Score=294.08 Aligned_cols=241 Identities=27% Similarity=0.400 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-c---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-I---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||+|.+.... . ..+.+.+|+++++.++|||+++++++|.+.+..++||||+.
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~- 98 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL- 98 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-
Confidence 36799999999999985 468999999986432 1 12468899999999999999999999999999999999997
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++..........
T Consensus 99 g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 99 GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 57777765332 24899999999999999999999998 9999999999999999999999999998776655556
Q ss_pred CCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||++. ...++.++||||||+++|||++|+.||.... ............. . ....
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~------~~~~~~~~~~~~~-~---------~~~~ 236 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNDS-P---------TLSS 236 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc------HHHHHHHHhcCCC-C---------CCCc
Confidence 777899999874 3567889999999999999999999985421 1111111111110 0 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
......+.+++.+||..+|++||++.+++.+.
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 237 NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred hhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 22445688999999999999999999999854
No 264
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.3e-34 Score=289.90 Aligned_cols=247 Identities=22% Similarity=0.342 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEecC--CcEEEEEEecCcc--------c---CHHHHHHHHHHhhc-CCCCCcccceEEEEecCcc
Q 006055 375 AEVLGKGTFGTAYKAVLEM--GTIVAVKRLKDVT--------I---SEREFKDKIEGVGA-VNHENLVPLRAYYYSMDEK 440 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~--------~---~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~ 440 (663)
.+.||+|+||.||+|.... ++.+|+|.+.... . ...++.+|+.++.+ ++||||+++++++.+....
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 84 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL 84 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence 3579999999999999654 7889999875321 1 12446678887764 7999999999999999999
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
++||||+++++|.+++..... ....+++..++.++.|++.||.|||+ .+ ++||||||+||+++.++.+||+|||.+
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 85 YIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999998854221 12458899999999999999999996 55 999999999999999999999999999
Q ss_pred cccCCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 520 HLVGPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 520 ~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
....... ...++..|+|||.+.+..++.++||||||+++|||++|+.||... +.......+...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~------~~~~~~~~~~~~~~~-~~- 233 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST------NMLSLATKIVEAVYE-PL- 233 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc------CHHHHHHHHhhccCC-cC-
Confidence 8765442 233566799999999888999999999999999999999998642 122222222211110 00
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
........+.+++.+|++.||++||++.|+.+++++
T Consensus 234 --------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 234 --------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred --------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 001223467888899999999999999999998863
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.9e-34 Score=292.38 Aligned_cols=245 Identities=19% Similarity=0.346 Sum_probs=192.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++... +|+.||+|.++.... ....+.+|++++++++|+||+++++++...+..++||||+++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS 85 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence 468999999999999954 799999998865422 23568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TP 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 528 (663)
|.++++... ....+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++....... ..
T Consensus 86 l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (286)
T cd06622 86 LDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN 161 (286)
T ss_pred HHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence 999987532 123589999999999999999999974 6 9999999999999999999999999997654332 23
Q ss_pred CCCccccCccccCCC------CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 529 NRVAGYRAPEVTDPC------KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~------~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
.++.+|+|||++.+. .++.++|||||||++|||++|+.||..... ......+..+... ..
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~-~~---------- 227 (286)
T cd06622 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY---ANIFAQLSAIVDG-DP---------- 227 (286)
T ss_pred CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch---hhHHHHHHHHhhc-CC----------
Confidence 356679999998554 347899999999999999999999964321 1111111111111 00
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.....++.+++.+|+..+|++||++++++.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 01112244567788899999999999999999984
No 266
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.3e-34 Score=295.28 Aligned_cols=242 Identities=25% Similarity=0.385 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEe------cCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYS------MDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+++.+|+|.+.........+..|+.++.++ +|+|++++++++.. ....+++|||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 100 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEF 100 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEe
Confidence 46799999999999995 5689999999876554556788899999888 79999999999853 3467999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~- 525 (663)
+++|+|.+++.... ...+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 101 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~ 175 (282)
T cd06636 101 CGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 175 (282)
T ss_pred CCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCcchhhhhccc
Confidence 99999999987543 234788889999999999999999998 999999999999999999999999998755322
Q ss_pred ---CCCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 ---STPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ---~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
....++..|+|||.+. ...++.++|||||||++|||++|+.||....... ........ ...
T Consensus 176 ~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~------~~~~~~~~-~~~---- 244 (282)
T cd06636 176 GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR------ALFLIPRN-PPP---- 244 (282)
T ss_pred cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh------hhhhHhhC-CCC----
Confidence 1233566799999875 3457889999999999999999999996532111 00000000 000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+||..||.+|||+.|++++
T Consensus 245 -----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 245 -----KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -----CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00111234578889999999999999999999863
No 267
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.3e-34 Score=289.65 Aligned_cols=246 Identities=26% Similarity=0.405 Sum_probs=194.2
Q ss_pred cccccccceEEEEEEec------CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
..||+|+||.||+|..+ +.+.|++|.+...... ...+.+|++++++++|+||+++++++.+....++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence 57999999999999853 3467999988654332 467899999999999999999999999888999999999
Q ss_pred CCCChhHhhccCCCC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 448 TMGSLSALLHGNKGA----GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
++|+|.++++..... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++++|||++....
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~ 168 (275)
T cd05046 91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQREVKVSLLSLSKDVY 168 (275)
T ss_pred CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCCCcEEEcccccccccC
Confidence 999999999754311 1225899999999999999999999998 9999999999999999999999999986543
Q ss_pred CCC-----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 524 PSS-----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 524 ~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
... ....+..|+|||.+.+...+.++||||||+++|+|++ |..||..... ...+.........
T Consensus 169 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~------~~~~~~~~~~~~~----- 237 (275)
T cd05046 169 NSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD------EEVLNRLQAGKLE----- 237 (275)
T ss_pred cccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch------HHHHHHHHcCCcC-----
Confidence 221 1123445999999988888899999999999999999 7888854321 1122222111110
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
..........+.+++.+|+..+|++||++.|++++|.
T Consensus 238 -----~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 -----LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0011123346888999999999999999999999885
No 268
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2e-34 Score=302.78 Aligned_cols=244 Identities=22% Similarity=0.284 Sum_probs=188.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||++.. .+++.||+|.+.... .....+.+|+.++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g 85 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG 85 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 36799999999999995 468899999986532 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 86 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 86 GDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 99999997532 24789999999999999999999998 99999999999999999999999999976654322
Q ss_pred ---CCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 528 ---PNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
..++.+|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+...... +.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~~-- 228 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHEER---FQ-- 228 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HHHHHHHHHcCCCc---cc--
Confidence 246778999999875 457889999999999999999999996421 22222222221100 00
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~ 637 (663)
. .....+...++.+++.+|+..++++ |+++++++++
T Consensus 229 ~--p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 F--PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred C--CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 0111122345667777887765544 5688888876
No 269
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-34 Score=292.59 Aligned_cols=245 Identities=28% Similarity=0.423 Sum_probs=192.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecC------ccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMD------EKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~~lv~ey 446 (663)
.+.||+|++|.||+|.. .+++.+++|.+.........+.+|+++++++ +|+||+++++++.... ..++||||
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 90 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMEL 90 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEc
Confidence 46799999999999996 4688999999887665567899999999998 7999999999997654 37999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++++|.++++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~ 167 (275)
T cd06608 91 CGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL 167 (275)
T ss_pred CCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccCCeEEECCCccceecccch
Confidence 999999999865321 1245899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ----CCCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 ----TPNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 ----~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...++..|+|||++.. ..++.++||||||+++++|++|+.||..... ......+... ....
T Consensus 168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~--- 237 (275)
T cd06608 168 GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP------MRALFKIPRN-PPPT--- 237 (275)
T ss_pred hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch------HHHHHHhhcc-CCCC---
Confidence 2335667999998753 3467889999999999999999999964211 1111111111 0000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+|+..||++|||++|++++
T Consensus 238 -----~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 238 -----LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred -----CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11122244578889999999999999999999873
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.1e-34 Score=286.26 Aligned_cols=241 Identities=20% Similarity=0.347 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++.. .+++.+|||.+..... ....+.+|+++++.++|||++++++.+...+..++||||++++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG 84 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence 36799999999999984 5789999999865432 2457889999999999999999999999889999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.+++.... ...+++..+..++.+++.|+.|||+++ ++||||||+||++++++ .+||+|||.+........
T Consensus 85 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 85 TLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999997543 235799999999999999999999998 99999999999998654 589999999987654322
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||.+.+..++.++||||||+++++|++|+.||... +....+..+...... . ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~------~~~~~~~~~~~~~~~-~----------~~ 222 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA------NLPALVLKIMSGTFA-P----------IS 222 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC------chHHHHHHHHhcCCC-C----------CC
Confidence 33566799999999888899999999999999999999998642 222222222221110 0 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+||..+|++|||++|++++
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1234467889999999999999999999874
No 271
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.2e-34 Score=288.67 Aligned_cols=239 Identities=21% Similarity=0.306 Sum_probs=185.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc------CHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI------SEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 445 (663)
.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++||||+++++++.+. ...++++|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 46899999999999985 5689999998864321 124578899999999999999999988753 45789999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++++|.+++.... .+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 87 YMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred CCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 999999999997532 4788999999999999999999998 999999999999999999999999998765321
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 S-------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
. ...++.+|+|||++.+..++.++|||||||++|||++|+.||.... ....+........ .+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~------~~~~~~~~~~~~~-----~~ 228 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE------AMAAIFKIATQPT-----NP 228 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc------hHHHHHHHhcCCC-----CC
Confidence 1 1235667999999998889999999999999999999999996431 1111111111110 01
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .+......+..++ .|+..+|++||+++||+++
T Consensus 229 ~-----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 229 Q-----LPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred C-----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0 0111223344554 6888999999999999873
No 272
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-33 Score=291.26 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=194.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey~~~g 450 (663)
+.||.|++|.||++.. .+++.+|+|.+..... ....+.+|+++++.++||||++++++|.+.. ..++||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 86 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG 86 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence 6799999999999995 4689999999875432 3467889999999999999999999986543 579999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TP 528 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 528 (663)
+|.+++..... ....+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 87 ~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 163 (287)
T cd06621 87 SLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTF 163 (287)
T ss_pred CHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecCCeEEEeeccccccccccccccc
Confidence 99988764221 2345788999999999999999999998 9999999999999999999999999987654322 22
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||.+.+..++.++||||+|+++|+|++|+.||+...... ............ .......+. ......
T Consensus 164 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~----~~~~~~ 237 (287)
T cd06621 164 TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSYIVN-MPNPELKDE----PGNGIK 237 (287)
T ss_pred cCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHHHhc-CCchhhccC----CCCCCc
Confidence 35667999999998889999999999999999999999997653211 111121111111 000000000 000012
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++.+|++.+|++|||+.|++++
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 238 WSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred hHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 34568899999999999999999999983
No 273
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.9e-34 Score=294.61 Aligned_cols=240 Identities=25% Similarity=0.350 Sum_probs=193.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.+++.++|||++++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcH
Confidence 36799999999999984 568899999986442 3346788999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----C
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST----P 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----~ 528 (663)
.+++... .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++........ .
T Consensus 104 ~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (293)
T cd06647 104 TDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (293)
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence 9998743 3788999999999999999999998 99999999999999999999999998876544322 2
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||.+....++.++||||||+++|++++|+.||......+. +........ ........
T Consensus 176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~------~~~~~~~~~---------~~~~~~~~ 240 (293)
T cd06647 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------LYLIATNGT---------PELQNPEK 240 (293)
T ss_pred cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh------eeehhcCCC---------CCCCCccc
Confidence 345669999999888889999999999999999999999975322110 000000000 00111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++.+||..+|++||++.+++.+
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33467788999999999999999999986
No 274
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5.4e-34 Score=290.09 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=193.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc-------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||++. ..+++.||+|.+..... ..+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~ 84 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence 4679999999999998 46799999999864321 135688999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPS 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~ 525 (663)
+++++|.+++.... ++++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||.+......
T Consensus 85 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 85 MAGGSVSHLLSKYG-----AFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred cCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999999997532 5789999999999999999999998 99999999999998776 5999999998766432
Q ss_pred C--------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 S--------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ~--------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
. ...++..|+|||.+.+..++.++||||+|+++++|++|+.||..... ................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~----- 229 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH---SNHLALIFKIASATTA----- 229 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---cchHHHHHHHhccCCC-----
Confidence 1 12245679999999888889999999999999999999999964321 1111111111111110
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+|+..+|++||++.|++++
T Consensus 230 -----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 230 -----PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11112334578889999999999999999999863
No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.5e-34 Score=289.42 Aligned_cols=244 Identities=23% Similarity=0.395 Sum_probs=190.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---C--------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---S--------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~--------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 442 (663)
.+.||+|+||.||+|.. .+|+.||+|.++.... . .+.+.+|+.+++.++|+|++++++++...+..++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSI 85 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEE
Confidence 46899999999999984 5689999998753210 0 1357889999999999999999999999999999
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+++|+|.++++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||+++..
T Consensus 86 v~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 86 FLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred EEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999754 25889999999999999999999998 999999999999999999999999999765
Q ss_pred CCCC------CCCCCccccCccccCCCC--CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 523 GPSS------TPNRVAGYRAPEVTDPCK--VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 523 ~~~~------~~~~~~~y~aPE~~~~~~--~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
.... ...++..|+|||.+.... ++.++|+||||++++|+++|..||..... ... ......... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~-~~~~~~~~~-~~ 231 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAA-MFKLGNKRS-AP 231 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----HHH-HHHhhcccc-CC
Confidence 4321 123566799999987654 78899999999999999999999853211 111 111111100 00
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+.. .........+.+++.+|+..+|++||++++|+++
T Consensus 232 ~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 232 PIPP-----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCc-----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0000 0111234577888899999999999999999874
No 276
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.4e-33 Score=292.80 Aligned_cols=245 Identities=27% Similarity=0.409 Sum_probs=195.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-IS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .++..||+|.+.... .. ...+.+|+++++.++|+|++++++++.+....++||||+.
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL- 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence 46799999999999994 568999999986432 11 3468889999999999999999999999999999999997
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|+|.+++.... .++++..+..++.+++.|+.|||+.+ |+||||+|+||+++.++.++|+|||++..........
T Consensus 109 g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (317)
T cd06635 109 GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV 182 (317)
T ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCCCCEEEecCCCccccCCccccc
Confidence 48877775432 34899999999999999999999998 9999999999999999999999999998776655566
Q ss_pred CCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||++. ...++.++|||||||++|||++|+.||.... .......+...... ....
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~~~----------~~~~ 246 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP----------TLQS 246 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhccCC----------CCCC
Confidence 777899999973 4567889999999999999999999986421 11111222211110 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
......+.+++.+|+..+|++||++.++++++..+.
T Consensus 247 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 247 NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 223346788888999999999999999999876543
No 277
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.5e-34 Score=292.73 Aligned_cols=239 Identities=22% Similarity=0.287 Sum_probs=185.1
Q ss_pred ccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHh---hcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 377 VLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGV---GAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
+||+|+||.||++.. .+++.+|+|.+..... ....+.+|..++ ...+|||++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 5689999998865422 123344454433 34479999999999998889999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|.+++.... .+++.....++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (279)
T cd05633 81 GGDLHYHLSQHG-----VFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (279)
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence 999999887532 4899999999999999999999998 9999999999999999999999999987554322
Q ss_pred CCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+. +..++.++|||||||++|||++|..||....... ...+...... .. ...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~------~~-----~~~ 218 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLT------VN-----VEL 218 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhhc------CC-----cCC
Confidence 234677899999986 4567899999999999999999999997542211 1111111100 00 011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
+.....++.+++.+|+..||++|| +++|+++|
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 122345678888999999999999 69999886
No 278
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.3e-34 Score=291.23 Aligned_cols=244 Identities=23% Similarity=0.390 Sum_probs=187.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHH-hhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEG-VGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++.. .+|+.||+|+++.... ....+..|+.. ++..+|||++++++++......++||||++ |
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T 84 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence 35799999999999995 4699999999876532 23455556664 666799999999999999999999999997 6
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.++++..... ...+++..++.++.|++.||+|||++ + ++||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (283)
T cd06617 85 SLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT 161 (283)
T ss_pred cHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 888887643222 24689999999999999999999987 6 99999999999999999999999999976543221
Q ss_pred -CCCCccccCccccCC----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 -PNRVAGYRAPEVTDP----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||.+.+ ..++.++|+|||||++|||++|+.||..... ....+........ .. .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~-~~-----~-- 228 (283)
T cd06617 162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----PFQQLKQVVEEPS-PQ-----L-- 228 (283)
T ss_pred cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-----CHHHHHHHHhcCC-CC-----C--
Confidence 235667999998865 4468899999999999999999999864211 1111112111110 00 0
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..+|++||++++++++
T Consensus 229 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 229 --PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred --CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011234568889999999999999999999873
No 279
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.1e-34 Score=293.97 Aligned_cols=239 Identities=24% Similarity=0.371 Sum_probs=193.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|++|.||++.. .+++.+|+|++.... ...+.+.+|+.+++.++|+|++++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 36899999999999984 578999999886443 2345688999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++... .+++..+..++.+++.||+|||+.+ |+||||+|+||+++.++.++|+|||.+....... ..
T Consensus 104 ~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 175 (285)
T cd06648 104 TDIVTHT------RMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL 175 (285)
T ss_pred HHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence 9998752 3789999999999999999999998 9999999999999999999999999887543321 12
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||.+.+..++.++||||||++++||++|+.||... +........... ..... .....
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~------~~~~~~~~~~~~-~~~~~--------~~~~~ 240 (285)
T cd06648 176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE------PPLQAMKRIRDN-LPPKL--------KNLHK 240 (285)
T ss_pred cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC------CHHHHHHHHHhc-CCCCC--------ccccc
Confidence 3566799999998888999999999999999999999998642 112222222211 10000 01111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
....+.+++.+|+..+|++||++.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 3346888999999999999999999997
No 280
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-33 Score=286.04 Aligned_cols=239 Identities=26% Similarity=0.360 Sum_probs=192.4
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCccc------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
+.||+|+||.||+|... +++.|++|.+..... ..+.+.+|+.+++.++|+|++++++++.+....++|+||++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP 85 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence 67999999999999965 799999998864321 23568899999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+++|.+++.... .+++..+..++.+++.|+.|||+.+ ++|+||+|+||+++.++.+||+|||.+.......
T Consensus 86 ~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 86 GGSLAKLLKKYG-----SFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 999999997532 4789999999999999999999998 9999999999999999999999999987654432
Q ss_pred -CCCCCccccCccccCCCC-CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 -TPNRVAGYRAPEVTDPCK-VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||.+.... ++.++|+||||+++|+|++|+.||..... .............. .
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~----------~ 222 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKELP----------P 222 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhcccCC----------C
Confidence 233566799999987766 88999999999999999999999965321 11111111101000 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........+.+++.+|+..+|++||++++++.+
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 011223467788889999999999999999863
No 281
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7e-34 Score=288.76 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=197.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+++++.++||||+++++++......++|+||+++++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGS 85 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCc
Confidence 367999999999999954 68999999987653 234678899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TP 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 528 (663)
|.+++.... ..+++.....++.+++.|+.|||+ .+ ++||||||+||++++++.++|+|||.+....... ..
T Consensus 86 L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 86 LDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred HHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 999997542 358889999999999999999999 77 9999999999999999999999999987654321 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++||||||+++++|++|+.||...... .......++......... . ....
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~-~---------~~~~ 228 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIVNEPPPR-L---------PSGK 228 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHhcCCCCC-C---------Chhh
Confidence 4566799999999889999999999999999999999999654221 112222332222211100 0 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+|+..+|++|||+.|++.+
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 229 FSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 44568889999999999999999999873
No 282
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.3e-34 Score=294.68 Aligned_cols=250 Identities=25% Similarity=0.353 Sum_probs=191.0
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|+||.||+|..+ +++.||+|++..... ..+.+.+|+++++.++||||+++++++......++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 367999999999999965 589999999865422 2456889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.++..... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 86 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 86 VLDDLEKYPN-----GLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred HHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 9988776422 3899999999999999999999998 99999999999999999999999999876543321
Q ss_pred -CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-cc----------cc
Q 006055 528 -PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WT----------SE 594 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~ 594 (663)
..++..|+|||++.+ ..++.++||||||++++||++|+.||..... ......+.... .. ..
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD------IDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch------HHHHHHHHHHhCCCchhhHHHhccch
Confidence 234566999999875 3467899999999999999999999864321 11111111000 00 00
Q ss_pred ----ccchhhhcc----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 595 ----VFDLELLRY----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 595 ----~~d~~~~~~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+..... .........+.+++.+|+..+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000 0011234568889999999999999999999874
No 283
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-33 Score=290.67 Aligned_cols=250 Identities=23% Similarity=0.313 Sum_probs=189.4
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|++|.||+|.. .+|+.||||+++.... ....+.+|++++++++||||+++++++.+.+..++||||+. ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 84 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cC
Confidence 5799999999999985 4689999998865422 23578899999999999999999999999999999999996 58
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++.... ...+++..+..++.+++.||+|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 85 l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 85 LKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred HHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 998886533 235899999999999999999999998 99999999999999999999999999876543321
Q ss_pred CCCCccccCccccCCCC-CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-ccccccch-------
Q 006055 528 PNRVAGYRAPEVTDPCK-VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WTSEVFDL------- 598 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~------- 598 (663)
..++..|+|||++.+.. ++.++||||||+++|||+||+.||...... .......... .......+
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 22456799999886644 588899999999999999999999643211 1111111100 00000000
Q ss_pred ---hhh--cccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ---ELL--RYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ---~~~--~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
... ..... .....++.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 00000 1122456788999999999999999999864
No 284
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.4e-33 Score=288.66 Aligned_cols=238 Identities=25% Similarity=0.387 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|++.+.+++||||+++++++......++||||+++++
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 88 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCc
Confidence 46799999999999984 5689999998764422 23578899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++... .+++.....++.+++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 89 l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06641 89 ALDLLEPG------PLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence 99998642 4789999999999999999999998 9999999999999999999999999987654322 1
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+...+.++|+|||||++++|++|..||..... ......+..... . ....
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~----------~~~~ 223 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP------MKVLFLIPKNNP-P----------TLEG 223 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch------HHHHHHHhcCCC-C----------CCCc
Confidence 2356679999999888889999999999999999999999864221 111111111110 0 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..+|++||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 233467788899999999999999999996
No 285
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-33 Score=286.57 Aligned_cols=238 Identities=22% Similarity=0.265 Sum_probs=193.1
Q ss_pred cccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||.|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999954 58999999986542 2346789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---TPN 529 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~ 529 (663)
.+++.... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++...... ...
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-----LFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC 153 (262)
T ss_pred HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence 99997532 4789999999999999999999998 9999999999999999999999999998765432 223
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||.+.+..++.++|+||||+++|+|++|..||..... +.......+...... ...+...
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~----------~~~~~~~ 219 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----DPMEIYNDILKGNGK----------LEFPNYI 219 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----CHHHHHHHHhccCCC----------CCCCccc
Confidence 56679999999888889999999999999999999999975432 122222222211100 0111112
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPS-----MSEVIK 636 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt-----~~ev~~ 636 (663)
..++.+++.+||..+|++||+ ++|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 457889999999999999999 677766
No 286
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-33 Score=287.14 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=196.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||.|+||+||+|.. .++..+|+|++.... ...+.+.+|++.++.++|+|++++++.+...+..++|+||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 85 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGS 85 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCc
Confidence 46799999999999994 468899999986543 235678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC---
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP--- 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--- 528 (663)
|.++++.... ...+++.....++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.........
T Consensus 86 l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 86 LLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred HHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 9999975321 235899999999999999999999998 999999999999999999999999998766543221
Q ss_pred -----CCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 529 -----NRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 529 -----~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
.++..|+|||++... .++.++|+|||||+++||++|+.||...... ............ ....
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~~~~~~~~~~------~~~~ 229 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM------KVLMLTLQNDPP------SLET 229 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh------hhHHHHhcCCCC------CcCC
Confidence 356679999998776 7889999999999999999999999653221 111111111110 0000
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..........+.+++.+|+..||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11112334567888999999999999999999874
No 287
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.8e-34 Score=292.49 Aligned_cols=241 Identities=27% Similarity=0.410 Sum_probs=196.6
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
+.||+|++|.||++... +++.||+|.+.........+.+|+++++.++|+|++++++++......++|+||+++++|.+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 104 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD 104 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHH
Confidence 57999999999999965 68999999987654456778999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STPNR 530 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 530 (663)
++.... ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 105 ~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 178 (286)
T cd06614 105 IITQNF----VRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVG 178 (286)
T ss_pred HHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccC
Confidence 998642 35899999999999999999999998 999999999999999999999999988655432 12235
Q ss_pred CccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHH
Q 006055 531 VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEM 610 (663)
Q Consensus 531 ~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 610 (663)
+..|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.... ... ........
T Consensus 179 ~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~--------~~~~~~~~ 243 (286)
T cd06614 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP------LRALFLITTKG-IPP--------LKNPEKWS 243 (286)
T ss_pred CcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcC-CCC--------CcchhhCC
Confidence 6679999999888889999999999999999999999864211 11111111111 000 11111234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 611 VQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 611 ~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.+++.+|++.+|.+||++.+++++
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 244 PEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 568889999999999999999999874
No 288
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-33 Score=285.73 Aligned_cols=242 Identities=24% Similarity=0.317 Sum_probs=193.7
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~ 449 (663)
+.||.|+||.||++. ..+|+.||+|.+...... .+.+..|+++++.++|+|++++++++... ...+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 579999999999998 457899999998754322 35678899999999999999999987643 457899999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-----hcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH-----AQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH-----~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
++|.+++..... ....+++..++.++.+++.||.||| +.+ ++|+||||+||++++++.+||+|||++.....
T Consensus 86 ~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 86 GDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred CCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 999999875321 2346899999999999999999999 666 99999999999999999999999999987654
Q ss_pred CCC----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 525 SST----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 525 ~~~----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
... ..++..|+|||.+.+..++.++|+||||+++++|++|+.||.... .......+. .....
T Consensus 163 ~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~-~~~~~------- 228 (265)
T cd08217 163 DSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLASKIK-EGKFR------- 228 (265)
T ss_pred CcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHHHHHh-cCCCC-------
Confidence 332 345667999999998889999999999999999999999997532 112222211 11110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..+|++||++++|+++
T Consensus 229 ---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 ---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1112334578899999999999999999999985
No 289
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=273.31 Aligned_cols=256 Identities=24% Similarity=0.365 Sum_probs=194.6
Q ss_pred CCCcccCHHHHHHHhhcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEE
Q 006055 360 NAARVFDLEDLLRASAEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYY 435 (663)
Q Consensus 360 ~~~~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 435 (663)
+....-++.|+.. ...||.|+.|.|+++.. .+|...|||.+..... ..+.+...++++..- .+|.||+.+|||.
T Consensus 84 g~r~~~dindl~~--l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 84 GQRYQADINDLEN--LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred CcccccChHHhhh--HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 3344567777733 46799999999999995 4689999999976533 235566667766554 4899999999999
Q ss_pred ecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEec
Q 006055 436 SMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSD 515 (663)
Q Consensus 436 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~D 515 (663)
.+...++.||.|.. -++.++..-. .++++...-++...+..||.||.++. .|+|||+||+|||+|+.|.+|+||
T Consensus 162 ~n~dV~IcMelMs~-C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeKH-~viHRDvKPSNILlDe~GniKlCD 235 (391)
T KOG0983|consen 162 TNTDVFICMELMST-CAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGNIKLCD 235 (391)
T ss_pred eCchHHHHHHHHHH-HHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHhc-ceeecccCccceEEccCCCEEeec
Confidence 99999999998865 4566665433 35888888899999999999998774 499999999999999999999999
Q ss_pred cccccccCCCCCCC---CCccccCccccCCC---CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh
Q 006055 516 FGLAHLVGPSSTPN---RVAGYRAPEVTDPC---KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 516 fg~a~~~~~~~~~~---~~~~y~aPE~~~~~---~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
||++..+-++.... +-+.|||||.+... .|+.++||||||+.++||.||+.||..-.. + .+.+..++.+
T Consensus 236 FGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t----d-Fe~ltkvln~ 310 (391)
T KOG0983|consen 236 FGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT----D-FEVLTKVLNE 310 (391)
T ss_pred ccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc----c-HHHHHHHHhc
Confidence 99998776554333 44459999999654 688899999999999999999999965221 1 1222233332
Q ss_pred cccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 EWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+. +.+.. ......++.+++..|+.+|+.+||...++++|
T Consensus 311 eP------P~L~~---~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 311 EP------PLLPG---HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CC------CCCCc---ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 21 11111 11145578888889999999999999999875
No 290
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-33 Score=294.23 Aligned_cols=241 Identities=25% Similarity=0.331 Sum_probs=192.9
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||++... +++.||+|.+..... ..+.+..|++++..++|+||+++++.+.+....++||||+.++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG 86 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence 57999999999999954 589999999876532 2356888999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 87 ~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 87 ELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred CHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 9999987533 245899999999999999999999998 9999999999999999999999999986543211
Q ss_pred -----------------------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC
Q 006055 527 -----------------------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV 577 (663)
Q Consensus 527 -----------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~ 577 (663)
...++..|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--- 238 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD--- 238 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH---
Confidence 112455699999999888999999999999999999999999643211
Q ss_pred ChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCC----HHHHHHH
Q 006055 578 DLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS----MSEVIKR 637 (663)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt----~~ev~~~ 637 (663)
.....+..... ...........+.+++.+|+..+|++||+ ++|++++
T Consensus 239 ---~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 239 ---ETFSNILKKEV----------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ---HHHHHHhcCCc----------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11111111110 01111114457888999999999999999 7777663
No 291
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-33 Score=292.21 Aligned_cols=249 Identities=23% Similarity=0.315 Sum_probs=191.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.. .+|+.||||.+...... ...+..|+++++.++|+||+++++++.+....++||||+
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM 84 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence 35799999999999995 46899999998755322 345778999999999999999999999988999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
+|+|.+++.... ..+++..+..++.||++||.|||+++ |+||||||+||+++.++.++|+|||+++.......
T Consensus 85 -~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 85 -ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred -CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 889999997532 25899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ----CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-------c----
Q 006055 528 ----PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-------W---- 591 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~---- 591 (663)
...+..|+|||.+.+ ..++.++|||||||+++||++|..||...... .....+.... +
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI------DQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH------HHHHHHHHHcCCCchhhhhhcc
Confidence 224556999998854 45788999999999999999998777643211 1111111100 0
Q ss_pred -cccccchhhhcc----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 592 -TSEVFDLELLRY----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 592 -~~~~~d~~~~~~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
............ .........+.+++.+|+..+|++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000 001123457889999999999999999999998
No 292
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.4e-34 Score=292.85 Aligned_cols=250 Identities=25% Similarity=0.305 Sum_probs=188.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+++++.++|+|++++++++.+....++|+||+++ +
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 84 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-D 84 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-C
Confidence 5799999999999995 4799999999865322 235678899999999999999999999999999999999974 8
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ..+++..+..++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 85 l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 85 LKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 888776432 24899999999999999999999998 9999999999999999999999999998654332 1
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc---------ccccc
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT---------SEVFD 597 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~d 597 (663)
..++..|+|||++.+. .++.++|||||||++|||++|+.|+..... .......+...... ....+
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC-----HHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 2345679999998664 468899999999999999999998643211 11111111110000 00000
Q ss_pred hhh-hcc-------cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LEL-LRY-------QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~-~~~-------~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
... ... ........++.+++.+|+..||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000 000 0011223567788999999999999999999874
No 293
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=282.15 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=190.9
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc--CHHHHHHHHHH-hhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI--SEREFKDKIEG-VGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
..||.|+||+|+|.. .+.|+..|||++..... ..+++..|.+. ++.-+.||||+++|.+..+...|+.||.|.- |
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-S 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-h
Confidence 579999999999987 56799999999987644 34567788876 4455899999999999999999999999975 7
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--C-
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--P- 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~- 528 (663)
|+.+...-.......+++...-.|+..+..||.||.+.- +|||||+||+|||+|..|.+||||||++..+..+-. .
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l-kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d 227 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL-KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD 227 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh-hhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence 765543211122345888888889989999999998764 699999999999999999999999999876654321 1
Q ss_pred CCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 529 NRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 529 ~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
.|-..|||||.+.. ..|+.++||||+|++|||+.||+.||..+. +..+.+.++.....+.-. .....
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdpp~l~------~~~~~ 296 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDPPILL------FDKEC 296 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCCCeec------Ccccc
Confidence 23334999999964 358899999999999999999999997643 233344444333221111 11122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+....+..++..|+.+|-..||...++.++
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 3455678889999999999999999998764
No 294
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9e-34 Score=287.68 Aligned_cols=241 Identities=27% Similarity=0.417 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++.. .+++.||+|.++.... ..+.+..|+++++.++|+||+++++++...+..++|+||++++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG 84 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence 36799999999999985 4789999999876544 3467899999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.++++... .+++..+..++.+++.||.|||+.+ |+|+||+|+||++++++.+||+|||++........
T Consensus 85 ~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 85 TLEELLEHGR-----ILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred cHHHHHhhcC-----CCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 9999997532 4788999999999999999999998 99999999999999999999999999977644322
Q ss_pred -----CCCCccccCccccCCCC---CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 528 -----PNRVAGYRAPEVTDPCK---VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 528 -----~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
..++..|+|||++.+.. ++.++||||||++++|+++|+.||..... .......+.. .. .+.
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-----~~~~~~~~~~-~~-----~~~ 226 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-----EFQIMFHVGA-GH-----KPP 226 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-----hHHHHHHHhc-CC-----CCC
Confidence 23456799999998766 78899999999999999999999964321 1111111111 00 000
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
. +........+.+++.+|++.+|++||+++|++.
T Consensus 227 ~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 227 I---PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C---CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 011112345678888999999999999999876
No 295
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=7.8e-34 Score=292.29 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=188.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++.++. |+||+++++++..+...+++|||+..
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~- 87 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI- 87 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-
Confidence 46899999999999984 568999999987543 23456888999999996 99999999999998899999999875
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++.++...........+++.....++.+++.||+|||+. + ++||||||+||+++.++.+||+|||+++......
T Consensus 88 ~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 165 (288)
T cd06616 88 SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKT 165 (288)
T ss_pred CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccc
Confidence 554433210001124589999999999999999999975 6 9999999999999999999999999997654322
Q ss_pred CCCCCccccCccccCCC---CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 TPNRVAGYRAPEVTDPC---KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||.... .....+......... .+ ..
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~------~~-~~ 233 (288)
T cd06616 166 RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKGDPP------IL-SN 233 (288)
T ss_pred cccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCCCCC------cC-CC
Confidence 23456679999998765 68899999999999999999999996432 111111111111100 00 01
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..+|++|||++||+++
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112244578889999999999999999999985
No 296
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-34 Score=297.08 Aligned_cols=248 Identities=21% Similarity=0.389 Sum_probs=192.5
Q ss_pred HHHHHHHhhcccccccceEEEEEEecCCcEEEEEEecCccc---CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEE
Q 006055 367 LEDLLRASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 367 ~~~l~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 442 (663)
+..-++...++||+||.+.||++...+.+.||+|++..... .-..|..|+..|.++ .|.+||++++|-..+...|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 33333445678999999999999988889999998764432 346799999999999 58999999999999999999
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||=+ .+|..+|+.... ....| .+..+..|++.|+.++|++| |||.||||.|+|+- .|.+||+|||+|...
T Consensus 438 vmE~Gd-~DL~kiL~k~~~---~~~~~-~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKS---IDPDW-FLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred Eeeccc-ccHHHHHHhccC---CCchH-HHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 999654 499999986542 33445 77789999999999999999 99999999999985 469999999999988
Q ss_pred CCCCC------CCCCccccCccccCCC-----------CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHH
Q 006055 523 GPSST------PNRVAGYRAPEVTDPC-----------KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 523 ~~~~~------~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 585 (663)
.++.+ ..||..||+||.+... .++.++||||+||+||+|+.|+.||....+ .|.+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aK- 581 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAK- 581 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHH-
Confidence 77643 4588889999988542 256789999999999999999999965321 1111
Q ss_pred HHhhcccccccchhh-hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 586 IVKDEWTSEVFDLEL-LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~-~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.|+.- ..++... ...+++++++.|+..||++||+..|++++
T Consensus 582 ------l~aI~~P~~~Iefp~~~-~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 ------LHAITDPNHEIEFPDIP-ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ------HHhhcCCCccccccCCC-CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 111222210 0111111 11238999999999999999999999985
No 297
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.3e-33 Score=285.55 Aligned_cols=234 Identities=21% Similarity=0.276 Sum_probs=185.6
Q ss_pred cccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhc-CCCCCcccceEEEEecCccEEEEEccCCCChhHh
Q 006055 378 LGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGA-VNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSAL 455 (663)
Q Consensus 378 lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~ 455 (663)
||+|+||.||++. ..++..+|+|.+........ |+..... .+|+|++++++++...+..++||||+++|+|.++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~ 99 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDL 99 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHH
Confidence 6999999999998 45789999999875433221 1222211 2799999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCCCCCCCCccc
Q 006055 456 LHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPSSTPNRVAGY 534 (663)
Q Consensus 456 l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~y 534 (663)
+.... .+++..+..++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||+++.........++..|
T Consensus 100 l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y 172 (267)
T PHA03390 100 LKKEG-----KLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDY 172 (267)
T ss_pred HHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcc
Confidence 97532 5899999999999999999999998 99999999999999998 9999999999877666556678889
Q ss_pred cCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHH
Q 006055 535 RAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLL 614 (663)
Q Consensus 535 ~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 614 (663)
+|||++.+..++.++||||||+++|||++|+.||...... ..+...+.... .. . ..........+.
T Consensus 173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~----~--------~~~~~~~~~~~~ 238 (267)
T PHA03390 173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ-QK----K--------LPFIKNVSKNAN 238 (267)
T ss_pred cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-cc----c--------CCcccccCHHHH
Confidence 9999999888999999999999999999999999743221 11222222111 00 0 011112344678
Q ss_pred HHHHHccCCCCCCCCC-HHHHHH
Q 006055 615 QLAIDCSAQYPDNRPS-MSEVIK 636 (663)
Q Consensus 615 ~l~~~C~~~dP~~RPt-~~ev~~ 636 (663)
+++.+|++.+|++||+ ++|+++
T Consensus 239 ~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 239 DFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHhccChhhCCchHHHHhc
Confidence 8888999999999996 699886
No 298
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.5e-33 Score=290.00 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|... +++.||+|.++... ...+.+.+|+++++.++|+||+++++++...+..++||||++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 85 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT 85 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence 367999999999999954 68899999987542 22467899999999999999999999999999999999999987
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
.+..+.... ..+++..+..++.+++.||.|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 86 ~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 86 LLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 777666432 24789999999999999999999998 9999999999999999999999999987765432
Q ss_pred -CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------------ccc
Q 006055 527 -TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------------EWT 592 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~ 592 (663)
...++..|+|||++.+. .++.++||||||+++|+|++|+.||...... +........... ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI---DQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 12345669999999887 7889999999999999999999998643211 000000010000 000
Q ss_pred -----ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 593 -----SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 593 -----~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+..............++.+++.+|+..+|++||++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000000000111225678899999999999999999999863
No 299
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-33 Score=283.70 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||++.. .+|..||+|.+.... ...+.+.+|+++++.++|+|++++++++......++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG 84 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence 36799999999999995 468999999986542 23456889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-eEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE-ARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~-~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||||+||++++++. +||+|||.+........
T Consensus 85 ~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 85 DLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 9999997543 235799999999999999999999998 999999999999998864 69999999976654322
Q ss_pred --CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 528 --PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 528 --~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
..++..|+|||+..+..++.++|+||||++++||++|+.||... +...++........ .. .
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~-~~----------~ 222 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN------NLHQLVLKICQGYF-AP----------I 222 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHhcccC-CC----------C
Confidence 23566799999998888899999999999999999999998642 22333333222211 00 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..+|++|||+.|++++
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11223467888899999999999999999874
No 300
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.5e-33 Score=293.08 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=189.5
Q ss_pred cccccc--cceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKG--TFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+| +||+||++.. .+|+.||+|.+...... .+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356776 9999999995 57999999998754332 35688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+.......
T Consensus 84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999987543 234889999999999999999999998 9999999999999999999999998653321110
Q ss_pred --------CCCCCccccCccccCCC--CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc------
Q 006055 527 --------TPNRVAGYRAPEVTDPC--KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE------ 590 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 590 (663)
....+..|+|||++.+. .++.++|||||||++|||++|+.||....... .+.......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 232 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ------MLLQKLKGPPYSPLD 232 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH------HHHHHhcCCCCCCcc
Confidence 01123459999998763 47889999999999999999999997532110 000000000
Q ss_pred ------------------------------ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 591 ------------------------------WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 591 ------------------------------~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
......+. .............+.+++.+|+..||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSE-RLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccc-cccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000000 001112234566789999999999999999999998653
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.4e-34 Score=295.05 Aligned_cols=242 Identities=20% Similarity=0.271 Sum_probs=190.0
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||++.. .+++.||+|.+..... ....+.+|+++++.++||||+++++.+......++||||++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG 86 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 6799999999999995 4578999999875421 2346788999999999999999999999988999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----- 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----- 525 (663)
+|.+++.... .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 87 DCATLLKNIG-----ALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 9999996532 4889999999999999999999998 999999999999999999999999998642110
Q ss_pred --------------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc
Q 006055 526 --------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW 591 (663)
Q Consensus 526 --------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 591 (663)
....++..|+|||++....++.++|+||||+++|||++|+.||... +...+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~------~~~~~~~~~~~~~~ 233 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD------TPEELFGQVISDDI 233 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhccc
Confidence 0112455699999998888999999999999999999999999642 12222222221110
Q ss_pred cccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 592 TSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
..+. .......++.+++.+|++.+|++||++.++.+.|+
T Consensus 234 ----~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 234 ----EWPE-----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred ----CCCC-----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 0000 00123446788999999999999999655555544
No 302
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.6e-33 Score=290.48 Aligned_cols=251 Identities=22% Similarity=0.333 Sum_probs=188.3
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|++|.||+|..+ +++.||+|.+..... ....+.+|+++++.++|+||+++++++.+.+..++||||+.+ +
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 88 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-D 88 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-C
Confidence 367999999999999954 689999999865422 234567899999999999999999999999999999999985 9
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 89 L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (291)
T cd07844 89 LKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN 162 (291)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence 999887543 25789999999999999999999998 999999999999999999999999998754321 11
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---hccccc---------
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK---DEWTSE--------- 594 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------- 594 (663)
...+..|+|||++.+ ..++.++||||+|+++|||++|+.||..... ....+..+.. ......
T Consensus 163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD-----VEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 234566999999865 4578899999999999999999999964321 1111111100 000000
Q ss_pred -------cc-chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 595 -------VF-DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 595 -------~~-d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. ...............++.+++.+|+..+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 00000000000112567789999999999999999998863
No 303
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=283.34 Aligned_cols=253 Identities=26% Similarity=0.370 Sum_probs=207.7
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 445 (663)
..++-+|.||.||+|.|+ +.+.|-||.++... ..-..+..|--.+..+.|||+..+.+.+.+ .+..+++|.
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP 368 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence 457899999999999754 34557778776542 223457778778888899999999999865 456799999
Q ss_pred ccCCCChhHhhccCCC---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 446 YLTMGSLSALLHGNKG---AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
++.-|+|..+|+..++ .+.+.+.-.+...++.|++.|++|||+++ |||.||..+|.+||+...+||+|-.+++..
T Consensus 369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~LqVkltDsaLSRDL 446 (563)
T KOG1024|consen 369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQLQVKLTDSALSRDL 446 (563)
T ss_pred ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhheeEEeccchhcccc
Confidence 9999999999984432 34566788888999999999999999999 999999999999999999999999999988
Q ss_pred CCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 523 GPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 523 ~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
.+.+ +.++...||+||.+....|+..+|||||||++|||+| |+.|+.+.. +..+...+++++
T Consensus 447 FP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-------PfEm~~ylkdGy---- 515 (563)
T KOG1024|consen 447 FPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-------PFEMEHYLKDGY---- 515 (563)
T ss_pred CcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-------HHHHHHHHhccc----
Confidence 7753 4556677999999999999999999999999999999 999985432 223444455543
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
+..++..++.+++.++..||+..|++||+++|++.-|.++..+.+
T Consensus 516 ------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 516 ------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred ------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 233455678899999999999999999999999999999876654
No 304
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.5e-33 Score=288.45 Aligned_cols=239 Identities=25% Similarity=0.388 Sum_probs=191.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCC---CCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVN---HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+++.||+|.+.... ....++.+|+.+++.++ |||++++++++......++||||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE 85 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence 36799999999999994 678999999986542 23456888999998886 9999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+++|.++++.. .+++.....++.+++.||.|||+.+ |+||||+|+||++++++.++|+|||++........
T Consensus 86 ~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 86 GGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred CCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 99999998642 4889999999999999999999998 99999999999999999999999999987654322
Q ss_pred ---CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 528 ---PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
..++..|+|||++.+ ..++.++|+||||+++|+|++|+.||..... ......+ ..... +.+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~------~~~~~~~-~~~~~-----~~~--- 222 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA------FRAMMLI-PKSKP-----PRL--- 222 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh------hhhhhcc-ccCCC-----CCC---
Confidence 235567999999865 4468899999999999999999999965321 1111110 00000 000
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..||++||++.|++++
T Consensus 223 -~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 223 -EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 001134568889999999999999999999874
No 305
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.9e-33 Score=283.49 Aligned_cols=239 Identities=21% Similarity=0.259 Sum_probs=186.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---IS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 445 (663)
.+.||+|+||.||++.. .+|+.||+|.+.... .. ...+.+|+.++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 46899999999999985 568999999875321 11 24678899999999999999999988764 34679999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++++|.+++.... .+++.....++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++.....
T Consensus 87 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 87 HMPGGSIKDQLKSYG-----ALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred ecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 999999999987432 4788889999999999999999998 999999999999999999999999998754321
Q ss_pred -------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 -------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ...+........
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~------- 226 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQPT------- 226 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHHHHHhcCCC-------
Confidence 112355679999999888889999999999999999999999964211 111111111100
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+......+.+++.+|+ .+|++||+++|++++
T Consensus 227 ---~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~ 261 (265)
T cd06652 227 ---NPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRH 261 (265)
T ss_pred ---CCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcC
Confidence 01112233446677778888 489999999999874
No 306
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.2e-33 Score=283.56 Aligned_cols=242 Identities=25% Similarity=0.377 Sum_probs=198.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|++|.||+|... +++.||||++..... ....+.+|+..+..++|+|++++++++......++||||+++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence 368999999999999955 599999999876532 35779999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
|.+++... ..+++..+..++.|+++|+.|||+ .+ ++||||+|+||+++.++.++|+|||.+........
T Consensus 86 L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 86 LADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999753 358999999999999999999999 88 99999999999999999999999999987654332
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... .........+..... . ...
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~-~----------~~~ 224 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ---PSFFELMQAICDGPP-P----------SLP 224 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc---cCHHHHHHHHhcCCC-C----------CCC
Confidence 2345679999999988899999999999999999999999965432 112222222221110 0 011
Q ss_pred HH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EE-EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~-~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. ....+.+++.+|+..+|++||++.|++++
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 34578889999999999999999999984
No 307
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3e-33 Score=288.32 Aligned_cols=238 Identities=21% Similarity=0.261 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .+++.||+|.++.... ....+.+|++++++++||||+++++++.+....++||||+++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG 85 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence 36799999999999995 4689999999865421 235688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
++|.++++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++...... ..
T Consensus 86 ~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 86 GELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999754 25889999999999999999999998 9999999999999999999999999998765442 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||.+.+...+.++||||||+++|+|++|+.||.... .......+..... ..+..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~------------~~~~~ 220 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKILEGKV------------RFPSF 220 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcCCc------------cCCcc
Confidence 45677999999988888899999999999999999999986432 1111112111110 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
....+.+++.+|+..+|++|| +++|++++
T Consensus 221 ~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 221 FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 234677888899999999999 77777754
No 308
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=274.64 Aligned_cols=261 Identities=23% Similarity=0.383 Sum_probs=198.5
Q ss_pred CHHHHHHHhhcccccccceEEEEEE-ecCCcEEEEEEecCc-ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEE
Q 006055 366 DLEDLLRASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV-TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 366 ~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 442 (663)
.++|+..-+.+.||+|+|+.|-.++ +.+|..||||++.+. ......+.+|++++... .|+||+.++++|.+++..||
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 3567777788999999999999888 788999999999766 45578889999999888 59999999999999999999
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEeccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLA 519 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a 519 (663)
|||.|.+|.|..+++..+ .+++.++.++..+||.||.+||.+| |.||||||+|||-..... +|||||.++
T Consensus 154 VfEKm~GGplLshI~~~~-----~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLg 226 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKRK-----HFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLG 226 (463)
T ss_pred EEecccCchHHHHHHHhh-----hccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccc
Confidence 999999999999998644 6899999999999999999999999 999999999999876554 899999887
Q ss_pred cccCCC--C---------CCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCC-CCCC---h
Q 006055 520 HLVGPS--S---------TPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNE-EGVD---L 579 (663)
Q Consensus 520 ~~~~~~--~---------~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~-~~~~---~ 579 (663)
.-.... . +..++..|||||+.. ...|+.++|.||+|||+|-|+.|..||.+.=.. .|.+ .
T Consensus 227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~ 306 (463)
T KOG0607|consen 227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV 306 (463)
T ss_pred cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc
Confidence 543211 1 123445599999863 346889999999999999999999999864321 1211 1
Q ss_pred HHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 580 PRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
....++.+-+...+..+..+...+..+..+.+ +++...+..|+.+|.++.+++.
T Consensus 307 Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eak---dlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 307 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAK---DLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cHHHHHHHHHHHhccCCcCChhhhHHhhHHHH---HHHHHHHhccHHhhhhhhhccC
Confidence 12222222111111112222222333344444 4455666799999999999987
No 309
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.5e-33 Score=286.99 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+++.++|||++++++++......++||||+ ++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~ 83 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS 83 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence 36799999999999995 5789999999875432 2467899999999999999999999999999999999999 99
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 84 DLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9999987533 35899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc------ccccch
Q 006055 527 -TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT------SEVFDL 598 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~ 598 (663)
...++..|+|||.+.+. .++.++||||+|++++||++|..||....+. .....+......... .+..+.
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcchh
Confidence 23356679999998654 4688999999999999999998877543211 111111111000000 000000
Q ss_pred hhhc---------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLR---------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~---------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .....+....+.+++.+|+..+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 00001223678889999999999999999999875
No 310
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.3e-33 Score=287.13 Aligned_cols=240 Identities=22% Similarity=0.267 Sum_probs=188.7
Q ss_pred cccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||+||++. ..+|+.||+|.+.... .....+..|+++++.++|||++++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6999999999998 4568999999986532 2244567899999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---TPN 529 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~ 529 (663)
.+++.... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+....... ...
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred HHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 99987543 235899999999999999999999998 9999999999999999999999999987654322 223
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++||||||+++++|++|+.||....... .......... .. ........
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~-----~~-------~~~~~~~~ 221 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--EKEELKRRTL-----EM-------AVEYPDKF 221 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--cHHHHHhccc-----cc-------cccCCccC
Confidence 4567999999988889999999999999999999999996533211 1111110000 00 00011122
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRP-----SMSEVIK 636 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RP-----t~~ev~~ 636 (663)
...+.+++.+|++.+|++|| ++.+++.
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 34677888999999999999 6666665
No 311
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.1e-33 Score=283.34 Aligned_cols=240 Identities=23% Similarity=0.255 Sum_probs=186.2
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHH-hhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEG-VGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||.||+|.. .+|+.||||.+...... ...+..|..+ ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4699999999999985 56899999998654221 1233444443 4455899999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
++|.++++... .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.........
T Consensus 82 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 154 (260)
T cd05611 82 GDCASLIKTLG-----GLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV 154 (260)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEeecccceeccccccCC
Confidence 99999997532 4788999999999999999999998 9999999999999999999999999998665444445
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||.+.+..++.++||||||+++|||++|..||.... .......+...... . ........
T Consensus 155 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-----~---~~~~~~~~ 220 (260)
T cd05611 155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET------PDAVFDNILSRRIN-----W---PEEVKEFC 220 (260)
T ss_pred CCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcccC-----C---CCcccccC
Confidence 6777999999988888999999999999999999999996422 11222222111100 0 00011123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
...+.+++.+|+..+|++||++.++.+
T Consensus 221 ~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 221 SPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred CHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 456888999999999999997754444
No 312
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.2e-33 Score=286.00 Aligned_cols=240 Identities=24% Similarity=0.305 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.+....++|+||+.+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG 84 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence 368999999999999954 69999999987542 2346788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++... .++++.....++.++++||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 85 ~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 85 GDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence 9999999753 25889999999999999999999998 9999999999999999999999999987765442
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...++....... ....+
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~-----------~~~~~ 222 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQETA-----------DVLYP 222 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhccc-----------cccCc
Confidence 233556699999998888999999999999999999999999754321 112221111110 01111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH--HHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSM--SEVIK 636 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~--~ev~~ 636 (663)
......+.+++.+|+..||.+||++ +|+++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 2234578889999999999999999 66553
No 313
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.8e-33 Score=282.78 Aligned_cols=242 Identities=29% Similarity=0.452 Sum_probs=197.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|++|.||++... +++.+++|++..... ....+.+|++.++.++|+|++++++++......++++||+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 84 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence 367999999999999964 789999999976543 457899999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---TPN 529 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~ 529 (663)
.+++.... ..+++..+..++.+++.||.|||+.+ ++||||+|+||++++++.++|+|||.+....... ...
T Consensus 85 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 85 KDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred HHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99987542 35899999999999999999999988 9999999999999999999999999998776543 334
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++||||||+++++|++|+.||..... ......... ...... ......
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~~~--------~~~~~~ 223 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP------MKALFKIAT-NGPPGL--------RNPEKW 223 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHh-cCCCCc--------Cccccc
Confidence 56679999999888889999999999999999999999864321 111111111 110110 011112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.+++.+|+..||++|||+.|++++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 3468889999999999999999999874
No 314
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.4e-33 Score=290.98 Aligned_cols=239 Identities=25% Similarity=0.387 Sum_probs=192.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+||+|+||.||++.. .+|+.||+|.+.... .....+.+|+.+++.++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999985 578999999886432 23456889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~ 529 (663)
+++... .+++.....++.|++.|++|||+.+ ++||||||+||++++++.++|+|||++....... ...
T Consensus 106 ~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 177 (292)
T cd06657 106 DIVTHT------RMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 177 (292)
T ss_pred HHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence 988532 3789999999999999999999998 9999999999999999999999999887554322 123
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++.+|+|||++.+..++.++|+||||+++|||++|+.||..... ...+... ....... .......
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~------~~~~~~~-~~~~~~~--------~~~~~~~ 242 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMI-RDNLPPK--------LKNLHKV 242 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhhCCcc--------cCCcccC
Confidence 56679999999888889999999999999999999999864211 1111111 1111100 0011122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.+++.+|+..+|.+||++.+++++
T Consensus 243 ~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 243 SPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 3457788889999999999999999984
No 315
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=300.19 Aligned_cols=242 Identities=24% Similarity=0.364 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEecC-CcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVLEM-GTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
...||.|+||.||+|..++ +-..|.|.+... ...-.+|.-||+++....||+||++++.|+-.+.++++.|||.||-.
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV 116 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV 116 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence 4468999999999999654 444566666533 22346789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC----CCCCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG----PSSTP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~----~~~~~ 528 (663)
+.++-.-. .++.+.++..++++++.||.|||++. |||||||+.|||++-+|.++|+|||.+.... ..++.
T Consensus 117 DaimlEL~----r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF 190 (1187)
T KOG0579|consen 117 DAIMLELG----RVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF 190 (1187)
T ss_pred hHHHHHhc----cccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence 98876432 46999999999999999999999998 9999999999999999999999999875432 34667
Q ss_pred CCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 529 NRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 529 ~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.||++|||||+.+. ..|+.++||||||++|.||..+.+|-.... ....+-.+.+.. +.. .
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln------pMRVllKiaKSe-PPT--------L 255 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSE-PPT--------L 255 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc------hHHHHHHHhhcC-CCc--------c
Confidence 89999999998753 568999999999999999999999975432 222222222211 111 1
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
-.+......+.+++.+|+.+||..||++.++++|
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2345566678888999999999999999999875
No 316
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.4e-33 Score=287.99 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=186.2
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+.+++.++|+||+++++++......++||||+. +++
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l 89 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDL 89 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCH
Confidence 5799999999999984 568999999986542 223467889999999999999999999999889999999996 677
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++.... ..+.+..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 90 ~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07870 90 AQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE 163 (291)
T ss_pred HHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCc
Confidence 77665322 24678888899999999999999998 9999999999999999999999999987543221 12
Q ss_pred CCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh----------------cc
Q 006055 529 NRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD----------------EW 591 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~ 591 (663)
.++..|+|||++.+. .++.++|||||||++|||++|+.||+..... ...+...... .+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-----FEQLEKIWTVLGVPTEDTWPGVSKLPNY 238 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-----HHHHHHHHHHcCCCChhhhhhhhhcccc
Confidence 346679999998753 4788999999999999999999999753221 1111111000 00
Q ss_pred cccccc----hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 592 TSEVFD----LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 592 ~~~~~d----~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+... ...............+.+++.+|+..||.+|||++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 239 KPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000 0000000000113467788899999999999999999863
No 317
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=8.4e-33 Score=287.52 Aligned_cols=243 Identities=25% Similarity=0.366 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+++++.++|+|++++++++......++||||+.
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 98 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 98 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-
Confidence 46799999999999994 468899999986431 123467789999999999999999999999999999999997
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|++.+++.... ..+++..+..++.+++.|+.|||+.+ ++||||||+||+++.++.++|+|||++....+.....
T Consensus 99 ~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 99 GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 58888775432 34789999999999999999999998 9999999999999999999999999998776655556
Q ss_pred CCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||++. ...++.++|||||||++|||++|+.||..... ............. ....
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~----------~~~~ 236 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNESP----------ALQS 236 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH------HHHHHHHhhcCCC----------CcCc
Confidence 777899999974 34578899999999999999999999854211 1111111111110 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
......+.+++.+||..+|++||++++++++-..
T Consensus 237 ~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred ccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 1234567888999999999999999999986443
No 318
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.9e-33 Score=291.01 Aligned_cols=259 Identities=23% Similarity=0.301 Sum_probs=190.0
Q ss_pred cccccccceEEEEEEec---CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey 446 (663)
++||+|+||.||+|... +++.||+|.+.... .....+.+|+.++..++||||+++++++.+. ...++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 85 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY 85 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence 57999999999999954 48999999987632 1235678899999999999999999999887 779999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC----CCceEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK----SYEARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~----~~~~kl~Dfg~a~~~ 522 (663)
+++ +|.+++..........+++.....++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++..
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~ 162 (316)
T cd07842 86 AEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162 (316)
T ss_pred CCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEEECCCcccccc
Confidence 985 7777765433222346889999999999999999999998 999999999999999 899999999999865
Q ss_pred CCCCC-------CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH---HHHHHHhh--
Q 006055 523 GPSST-------PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR---WVQSIVKD-- 589 (663)
Q Consensus 523 ~~~~~-------~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~---~~~~~~~~-- 589 (663)
..... ..++..|+|||.+.+. .++.++|||||||+++||++|+.||............. .+..+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 242 (316)
T cd07842 163 NAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG 242 (316)
T ss_pred CCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhC
Confidence 43221 2345679999987664 57889999999999999999999997644322111000 00000000
Q ss_pred -cc---------cccccc----hhhhcc--cChH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 -EW---------TSEVFD----LELLRY--QNVE-------EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 -~~---------~~~~~d----~~~~~~--~~~~-------~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. ..+... ...... .... ....++.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 243 TPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred CCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 000000 000000 0000 223468899999999999999999999874
No 319
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.2e-33 Score=286.39 Aligned_cols=249 Identities=25% Similarity=0.272 Sum_probs=189.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|..+ +++.+|+|.++..... ...+.+|+.++.+++||||+++++++... ...++||||+.
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~ 89 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE 89 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC
Confidence 467999999999999964 6899999998754322 34567899999999999999999999877 78999999998
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+ +|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~-~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 162 (293)
T cd07843 90 H-DLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP 162 (293)
T ss_pred c-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCcEEEeecCceeeccCCccc
Confidence 5 9999887533 25899999999999999999999998 9999999999999999999999999998765431
Q ss_pred --CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-------------
Q 006055 527 --TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE------------- 590 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 590 (663)
...++..|+|||.+.+. .++.++|+||||++++||++|+.||...... .....+....
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI------DQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCchHHHHHhhc
Confidence 22345679999998764 4688999999999999999999999753211 1111111000
Q ss_pred -------ccccccchhhhcccChHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 591 -------WTSEVFDLELLRYQNVEE-EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 591 -------~~~~~~d~~~~~~~~~~~-~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........+ ....... ....+.+++.+|+..+|++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQL-RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhh-hccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000000 0000000 24567788999999999999999999874
No 320
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.8e-33 Score=286.79 Aligned_cols=254 Identities=22% Similarity=0.250 Sum_probs=188.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCC-CCCcccceEEEEecCc-----cEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVN-HENLVPLRAYYYSMDE-----KLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~-----~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+.+++.++ |+||+++++++...+. .++||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 36799999999999995 4689999998765422 2357888999999995 6999999999877665 79999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVG 523 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~ 523 (663)
||+++ +|.+++..........+++..++.++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS 162 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeecccceecC
Confidence 99986 8988886543222346899999999999999999999998 999999999999998 8899999999987653
Q ss_pred CCC----CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-cc-----
Q 006055 524 PSS----TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WT----- 592 (663)
Q Consensus 524 ~~~----~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~----- 592 (663)
... ...++..|+|||++.+ ..++.++||||||+++|||++|..||..... ......+.... ..
T Consensus 163 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 163 IPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE------LQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred CCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHHhCCCChhhC
Confidence 321 1234566999998865 4578899999999999999999999964321 11111111100 00
Q ss_pred ccccchh----hh--ccc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 593 SEVFDLE----LL--RYQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 593 ~~~~d~~----~~--~~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.. .. ... .......++.+++.+|+..+|++||+++|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 00 000 001234567889999999999999999999874
No 321
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.1e-32 Score=287.52 Aligned_cols=252 Identities=19% Similarity=0.250 Sum_probs=186.9
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
++.+|.|+++.||++.. +++.||||++.... ...+.+.+|++.++.++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455555655555554 69999999987542 234678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.++++... ...+++.....++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+.......
T Consensus 86 l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999997532 234788999999999999999999998 9999999999999999999999999886543211
Q ss_pred ------CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc------
Q 006055 527 ------TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT------ 592 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 592 (663)
...++..|+|||++.. ..++.++|||||||+++||++|+.||....... ...... .....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-----~~~~~~-~~~~~~~~~~~ 234 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-----MLLEKV-RGTVPCLLDKS 234 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHH-hccCccccccC
Confidence 1224456999999865 357889999999999999999999997532110 011110 00000
Q ss_pred ---------cc----ccchhh---hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 593 ---------SE----VFDLEL---LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 593 ---------~~----~~d~~~---~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.. ..+... ...........++.+++.+||..||++|||++|++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 00 000000 00111122345688899999999999999999999853
No 322
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.5e-33 Score=285.84 Aligned_cols=251 Identities=25% Similarity=0.314 Sum_probs=190.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|++|.||+|.. .+|+.||+|++..... ....+.+|+++++.++|||++++++++.+....+++|||++ +
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~ 82 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L 82 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence 36799999999999985 5799999999875422 23568889999999999999999999999999999999995 6
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ...+++..+..++.|+++||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 83 ~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 83 DLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred CHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence 8999987543 135899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-cccccc--------
Q 006055 527 TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WTSEVF-------- 596 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------- 596 (663)
...++..|+|||++.+. .++.++||||||+++|+|++|+.||...... .....+.+.. ......
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI------DQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCChHHhhhhhhch
Confidence 12245679999987654 4688999999999999999999999643211 1111111100 000000
Q ss_pred ch--hhhc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DL--ELLR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~--~~~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+. .... ... .......+.+++.+|++.+|++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0000 000 11123467889999999999999999999864
No 323
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.8e-33 Score=283.39 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=187.5
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCC-CCCcccceEEEEec--CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVN-HENLVPLRAYYYSM--DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|. ..+++.||+|+++.... ......+|+.++.++. |+|++++++++.+. +..++||||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 3579999999999999 45789999999876422 2334557888888885 99999999999887 78999999997
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
|+|.+.+.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++. +.+||+|||+++.......
T Consensus 84 -~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 84 -MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred -ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 58888876432 35899999999999999999999998 999999999999999 9999999999986643322
Q ss_pred --CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc--------ccccc
Q 006055 528 --PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW--------TSEVF 596 (663)
Q Consensus 528 --~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 596 (663)
..++..|+|||++.. ..++.++|||||||++|||++|+.||...... +...+......... .....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 235667999997644 55788999999999999999999999653211 11111111110000 00000
Q ss_pred chhhhc--c----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLR--Y----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~--~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+..... . .........+.+++.+|+..+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000 0 0012335678999999999999999999999874
No 324
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.7e-33 Score=284.43 Aligned_cols=239 Identities=23% Similarity=0.279 Sum_probs=184.0
Q ss_pred ccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHH---HhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 377 VLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIE---GVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
+||+|+||.||+|.. .+++.||+|.+...... ...+..|.. .++...|||++++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999984 56899999998654211 222334433 3445689999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--C
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--S 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--~ 526 (663)
+|+|.+++... ..+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 99999988643 25899999999999999999999998 999999999999999999999999998755332 2
Q ss_pred CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+. .++.++||||+|+++|||++|+.||....... ......... . ... ..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~-~------~~~-----~~ 218 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL-T------MAV-----EL 218 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc---hHHHHHHhh-c------cCC-----CC
Confidence 23466779999998754 68899999999999999999999997542211 111100000 0 000 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
+.....++.+++.+|+..+|++|| ++.+++++
T Consensus 219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 111245678888899999999999 99999874
No 325
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.7e-32 Score=285.83 Aligned_cols=240 Identities=27% Similarity=0.413 Sum_probs=190.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||+|.+..... ....+.+|+++++.++|||++++++++.+....++||||+.
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 104 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL- 104 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence 46799999999999984 5689999999864322 12467889999999999999999999999999999999996
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|++.+++.... .++++..+..++.|++.|+.|||+.+ ++||||||+||++++++.+||+|||++..........
T Consensus 105 ~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~ 178 (313)
T cd06633 105 GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV 178 (313)
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcc
Confidence 57877775432 35899999999999999999999998 9999999999999999999999999987665544555
Q ss_pred CCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||++. ...++.++|||||||++|||++|..||..... ...+.......... . ..
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~~~~~~-~---------~~ 242 (313)
T cd06633 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNDSPT-L---------QS 242 (313)
T ss_pred ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCCC-C---------Cc
Confidence 677899999984 35678899999999999999999999864321 11222221111100 0 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......+.+++.+|++.+|++||++.+++.+
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122357788889999999999999999974
No 326
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.5e-33 Score=294.06 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=190.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey 446 (663)
.+.||+|+||.||+|. ..+|+.||+|.+.... .....+.+|+.+++.++|+||+++++++... ...++|+||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 3689999999999998 4578999999986432 2345678899999999999999999987644 347899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+.+ +|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~-~l~~~~~~~------~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 90 MET-DLYKLIKTQ------HLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred ccc-CHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 975 888887642 4899999999999999999999998 9999999999999999999999999987654321
Q ss_pred C-------CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc---cc
Q 006055 527 T-------PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS---EV 595 (663)
Q Consensus 527 ~-------~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 595 (663)
. ..++..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... .....+.........+ .+
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---HQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCCHHHHHHh
Confidence 1 234667999998654 56788999999999999999999999642110 0011111111100000 00
Q ss_pred cchh-------hh--ccc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCC
Q 006055 596 FDLE-------LL--RYQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPS 644 (663)
Q Consensus 596 ~d~~-------~~--~~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~ 644 (663)
.+.. .. ... .......++.+++.+|++.+|++|||+.|++++ ++.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 0000 00 000 001224568899999999999999999999997 5555433
No 327
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.4e-33 Score=281.78 Aligned_cols=239 Identities=23% Similarity=0.343 Sum_probs=190.9
Q ss_pred cccccceEEEEEEec-CCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||.||++... +|+.+|+|.+..... ....+.+|++++++++|+|++++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999965 599999999875432 345788899999999999999999999998999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC------
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS------ 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------ 526 (663)
.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG-----SLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99997532 5899999999999999999999998 9999999999999999999999999987643321
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 ------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
...++..|+|||.......+.++||||||++++|+++|+.||.... ............. .
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~~-----~--- 219 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNILNGKI-----E--- 219 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcCCc-----C---
Confidence 1224556999999988888999999999999999999999996432 1222222211110 0
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
..........+.+++.+|+..+|++|||+.++.+.|+
T Consensus 220 --~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 --WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0001112456788899999999999999955555443
No 328
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=321.76 Aligned_cols=241 Identities=27% Similarity=0.377 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+..||.|.||.||.|. ..+|...|||.++-.. ..-+...+|+.++..++|||+|+++|+=.+++..++.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 5689999999999999 7789999999876432 22356889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++...+ ..++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|.......
T Consensus 1320 sLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1320 SLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred cHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 9999997543 3567777788899999999999999 9999999999999999999999999998765542
Q ss_pred ----CCCCCccccCccccCCC---CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 ----TPNRVAGYRAPEVTDPC---KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 ----~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
...||+-|||||++.+. +...++||||+|||+.||+||+.||....++ ...+-.+-...
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-----~aIMy~V~~gh--------- 1458 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-----WAIMYHVAAGH--------- 1458 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-----hHHHhHHhccC---------
Confidence 13477889999999663 4566789999999999999999999754321 11111111111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.++.++....+-.+++.+|+..||++|.++.|++++-
T Consensus 1459 --~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1459 --KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred --CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 1122233444556777799999999999999888753
No 329
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-33 Score=310.82 Aligned_cols=257 Identities=18% Similarity=0.181 Sum_probs=178.8
Q ss_pred hcccccccceEEEEEEecC--CcEEEEE------------------EecCcccCHHHHHHHHHHhhcCCCCCcccceEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM--GTIVAVK------------------RLKDVTISEREFKDKIEGVGAVNHENLVPLRAYY 434 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~--g~~vavK------------------~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 434 (663)
.+.||+|+||+||++..+. +..+++| .++........+.+|+++++.++|+||+++++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 232 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEIL 232 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence 4689999999999987432 2222222 1111122235678999999999999999999999
Q ss_pred EecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEe
Q 006055 435 YSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVS 514 (663)
Q Consensus 435 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~ 514 (663)
...+..++|+|++. ++|.+++..................|+.|++.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 233 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~~~~vkL~ 309 (501)
T PHA03210 233 RSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNCDGKIVLG 309 (501)
T ss_pred EECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEE
Confidence 99999999999986 47777765432111122345567789999999999999998 9999999999999999999999
Q ss_pred ccccccccCCCC-----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh
Q 006055 515 DFGLAHLVGPSS-----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 515 Dfg~a~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
|||+++...... ...++..|+|||++.+..++.++|||||||++|||++|..++..... .+....+..++..
T Consensus 310 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~---~~~~~~~~~~~~~ 386 (501)
T PHA03210 310 DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG---GKPGKQLLKIIDS 386 (501)
T ss_pred eCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC---CCHHHHHHHHHHh
Confidence 999998765432 23467789999999999999999999999999999998764432111 1111111111110
Q ss_pred c--ccccccchh-----------hh-cccChH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 E--WTSEVFDLE-----------LL-RYQNVE------EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ~--~~~~~~d~~-----------~~-~~~~~~------~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. ...++.+.. .. ...... ....++.+++.+|+..||++|||+.|++++
T Consensus 387 ~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 387 LSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred cccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 000000000 00 000000 112356777889999999999999999975
No 330
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.4e-33 Score=288.79 Aligned_cols=243 Identities=24% Similarity=0.389 Sum_probs=186.8
Q ss_pred hhcccccccceEEEEEEecC-CcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 374 SAEVLGKGTFGTAYKAVLEM-GTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
..+.||+|+||.||+|...+ ++.||||.++.... ....+..|+..+.+. .|+||+++++++.+....++||||+.+
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 98 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST 98 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc
Confidence 35789999999999999654 89999999975432 234566677766666 599999999999999999999999864
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
++.+++.... ..+++..+..++.+++.|+.|||+. + |+||||+|+||++++++.+||+|||++........
T Consensus 99 -~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~ 171 (296)
T cd06618 99 -CLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK 171 (296)
T ss_pred -CHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCCCCEEECccccchhccCCCcc
Confidence 7777765422 2589999999999999999999974 6 99999999999999999999999999876543222
Q ss_pred --CCCCccccCccccCCCC----CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 528 --PNRVAGYRAPEVTDPCK----VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 528 --~~~~~~y~aPE~~~~~~----~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
..++..|+|||++.+.. ++.++||||||+++|||++|+.||..... .............. .
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~-~------- 238 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-----EFEVLTKILQEEPP-S------- 238 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-----HHHHHHHHhcCCCC-C-------
Confidence 23456799999987654 78899999999999999999999964211 11122222221110 0
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+|+..||++||++++++++
T Consensus 239 -~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 -LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011233467888999999999999999999876
No 331
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.3e-33 Score=286.07 Aligned_cols=252 Identities=25% Similarity=0.322 Sum_probs=191.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|++|.||+|.. .+|+.||||.++... .....+.+|+++++.++|+|++++++++.+.+..++||||+++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 83 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D 83 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence 36799999999999996 468999999987542 2345677899999999999999999999999999999999985 8
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... .
T Consensus 84 l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 84 LKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred HHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 8888764331 245899999999999999999999998 9999999999999999999999999997654321 2
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc------cc-----cc
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW------TS-----EV 595 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~ 595 (663)
..++..|++||.+.+. .++.++||||||+++|+|++|+.||...... .....+..... .. ..
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE------DQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHHHhCCCChhhHHHHhcCch
Confidence 2346679999988654 5688999999999999999999999753221 11111111000 00 00
Q ss_pred cchhhhc------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLR------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....... ..........+.+++.+|++.||.+||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 00011224567889999999999999999999863
No 332
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.4e-32 Score=277.56 Aligned_cols=240 Identities=26% Similarity=0.373 Sum_probs=196.6
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~ 449 (663)
+.||+|++|.||+|... +++.|++|.+.... ...+.+.+|++.+++++|+||+++++.+... ...++|+||+++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 85 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG 85 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence 67999999999999965 79999999987654 2356788999999999999999999999888 789999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
++|.+++.... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 86 ~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 86 GSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 99999997532 5899999999999999999999998 99999999999999999999999999987655432
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
..++..|+|||...+...+.++||||||+++++|++|..||.... +....+......... .
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~----------~ 223 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEP----------P 223 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCC----------c
Confidence 335567999999988889999999999999999999999997533 111111111110000 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+......+.+++.+|+..+|++||++.|++++
T Consensus 224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 1112224578888999999999999999999874
No 333
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.8e-33 Score=289.44 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=184.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCc--------cEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE--------KLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--------~~l 442 (663)
.+.||+|+||.||+|.. .+++.||||.+.... .....+.+|++++++++||||+++++++...+. .++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 36799999999999995 468999999886432 223456789999999999999999999876544 399
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+.+ +|.+++.... ..+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 97 VFEFCEH-DLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred EEcCCCc-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 9999975 8888876432 24899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCC--------CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 523 GPSST--------PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 523 ~~~~~--------~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
..... ..++..|+|||++.+. .++.++||||||+++|||++|+.||...... .....+..... ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~---~~~~~~~~~~~-~~~~ 245 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ---HQLTLISQLCG-SITP 245 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhC-CCCh
Confidence 43211 1234569999988664 3688999999999999999999998653211 11111111110 0000
Q ss_pred ccc----chh------hhcc--cChH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVF----DLE------LLRY--QNVE------EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~----d~~------~~~~--~~~~------~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
++. +.. .... .... .....+.+++.+|+..||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 000 0000 0000 012356789999999999999999999874
No 334
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=286.05 Aligned_cols=238 Identities=23% Similarity=0.276 Sum_probs=191.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
..+||+|+||.||-.. -.+|+.+|.|++.+. ...+.....|-.++.+++.+.||.+--.|...+..++|+..|.+
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG 269 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG 269 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence 3589999999999988 456999999988654 33456678899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.-++.... ...+++...+.++.+|+.||++||+.+ |++|||||+|||+|+.|+++|+|.|+|..+.....
T Consensus 270 GDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~ 344 (591)
T KOG0986|consen 270 GDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR 344 (591)
T ss_pred CceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccCCCeEeeccceEEecCCCCccc
Confidence 99998886543 345899999999999999999999998 99999999999999999999999999998876543
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..||.||||||++++..|+...|.||+||++|||+.|+.||..-.+.. +-.+.-+.+..+ + ....
T Consensus 345 ~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--k~eEvdrr~~~~--------~----~ey~ 410 (591)
T KOG0986|consen 345 GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--KREEVDRRTLED--------P----EEYS 410 (591)
T ss_pred cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--hHHHHHHHHhcc--------h----hhcc
Confidence 368999999999999999999999999999999999999997643221 000111111111 0 0112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSM 631 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~ 631 (663)
+....+..++....+.+||++|.--
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccC
Confidence 2334455566667889999998643
No 335
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-32 Score=277.93 Aligned_cols=243 Identities=24% Similarity=0.344 Sum_probs=196.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|+||.||++. ..+++.+|+|.+..... ....+.+|+++++.++|+||+++++++.+....++||||++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG 84 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence 3679999999999998 45789999999875432 2346778999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--CC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--TP 528 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 528 (663)
+|.+++.... .....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||+++...... ..
T Consensus 85 ~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 161 (256)
T cd08530 85 DLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQ 161 (256)
T ss_pred CHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecCCcEEEeeccchhhhccCCcccc
Confidence 9999986532 12345899999999999999999999998 9999999999999999999999999998765442 22
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||...+..++.++|+||||++++||++|+.||.... .......+.... .. .....
T Consensus 162 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~-~~----------~~~~~ 224 (256)
T cd08530 162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS------MQDLRYKVQRGK-YP----------PIPPI 224 (256)
T ss_pred cCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcCC-CC----------CCchh
Confidence 35667999999998888999999999999999999999996432 111111111111 00 11123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+|+..+|++||++.|++++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 225 YSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 44578899999999999999999999874
No 336
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-34 Score=270.19 Aligned_cols=246 Identities=23% Similarity=0.311 Sum_probs=193.8
Q ss_pred HHhhcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhh-cCCCCCcccceEEEEe----cCccEEEEE
Q 006055 372 RASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVG-AVNHENLVPLRAYYYS----MDEKLLVYD 445 (663)
Q Consensus 372 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~~~lv~e 445 (663)
....++||-|-.|.|-... ..+|+++|+|++.+.. ...+|++.-- .-.|||||.++++|.+ ..-+++|||
T Consensus 64 ~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE 139 (400)
T KOG0604|consen 64 SISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME 139 (400)
T ss_pred eehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence 3345799999999999887 5679999999987643 3456666533 3379999999998754 344689999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEecccccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLV 522 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~ 522 (663)
.|++|.|.+.++... ...+++..+..|..||+.|+.|||+.. |.||||||+|+|... |..+||+|||+|+..
T Consensus 140 ~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 140 CMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred cccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEeccccccccc
Confidence 999999999998654 567999999999999999999999998 999999999999964 446899999999877
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPS---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
... .+...|+.|.|||++...+|+...|+||+||++|-|+.|.+||+... +..+..-++..+..+. ++..
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h---g~aispgMk~rI~~gq----y~FP 287 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH---GLAISPGMKRRIRTGQ----YEFP 287 (400)
T ss_pred CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC---CccCChhHHhHhhccC----ccCC
Confidence 643 23457888999999999999999999999999999999999998643 3333333443333332 1111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
. ++-...+++..++++..+..+|.+|.|++|++.
T Consensus 288 ~---pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 288 E---PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred C---hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 122334556667788999999999999999998
No 337
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.4e-32 Score=281.95 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=192.9
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|++|.||++.. .+|+.+|+|.+..... ....+.+|++++++++|+||+++++++......++|+||+++ +
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence 5799999999999985 5789999999876533 246788899999999999999999999999999999999975 8
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
+.+++.... ..+++..+..++.+++.||.|||+.+ |+|+||||+||++++++.++|+|||.+....... .
T Consensus 84 l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 84 LYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred HHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 888886532 35899999999999999999999998 9999999999999999999999999997765543 1
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---hcc---cccccc---
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK---DEW---TSEVFD--- 597 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~d--- 597 (663)
..++..|+|||.+.+. .++.++||||||+++|+|++|+.||...... ..+..+.. ... .....+
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI------DQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHcCCCchHhcccchhhhh
Confidence 2345569999998776 7889999999999999999999998643211 11111110 000 000000
Q ss_pred ---hhhhc------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 ---LELLR------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ---~~~~~------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..... .........++.+++.+|+..||.+||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000 00112345678899999999999999999999873
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-32 Score=282.04 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=190.8
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~ 449 (663)
+.||+|+||.||+|... +|+.+|+|++.... .....+.+|+++++.++|+|++++++++.+. ...++||||+++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH 84 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc
Confidence 57999999999999955 58999999997652 2245688999999999999999999999887 789999999985
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
+|.+++.... ..+++..+..++.+++.||+|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 85 -~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 85 -DLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred -cHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 8988886532 35899999999999999999999998 9999999999999999999999999998765442
Q ss_pred --CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---cccc---cccc
Q 006055 527 --TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTS---EVFD 597 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~d 597 (663)
....+..|+|||.+.+ ..++.++||||||++++||++|+.||..... ...+..+... .... ...+
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE------LEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCchhhcccccc
Confidence 1224556999998764 4578899999999999999999999965321 1111111110 0000 0000
Q ss_pred -------------hhhhcccChHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 -------------LELLRYQNVEE-EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 -------------~~~~~~~~~~~-~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..... ..... +...+.+++.+|+..+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 232 LPWFENLKPKKPYKRRLR-EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred chhhhhccccccchhHHH-HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 00011 25678899999999999999999999873
No 339
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-33 Score=309.56 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=205.9
Q ss_pred cCHHHHHHHhhcccccccceEEEEEEec----C----CcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEE
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAVLE----M----GTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAY 433 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~ 433 (663)
++.+.+ ...+.||+|.||.|++|... . ...||||.++.... ..+.+..|+++|+.+ +|+|++.++|+
T Consensus 293 ~~~~~l--~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 293 IPRENL--KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred echhhc--cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 344444 34559999999999999832 1 45799999987643 357899999999998 69999999999
Q ss_pred EEecCccEEEEEccCCCChhHhhccCC---CCC------C--CCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCC
Q 006055 434 YYSMDEKLLVYDYLTMGSLSALLHGNK---GAG------R--TPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSN 502 (663)
Q Consensus 434 ~~~~~~~~lv~ey~~~gsL~~~l~~~~---~~~------~--~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~N 502 (663)
|......++|+||+..|+|.++++..+ ... . ..+.....+.++.|||.|++||++.. ++||||..+|
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRN 448 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARN 448 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhh
Confidence 999899999999999999999998765 111 1 24889999999999999999999997 9999999999
Q ss_pred EEEcCCCceEEeccccccccCCCCCC--CC-----CccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCC
Q 006055 503 ILLTKSYEARVSDFGLAHLVGPSSTP--NR-----VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNE 574 (663)
Q Consensus 503 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~-----~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~ 574 (663)
||++++..+||+|||+|+...+.... .+ ...|||||.+....++.|+|||||||++||++| |..||.+...
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~- 527 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP- 527 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence 99999999999999999976554322 11 234999999999999999999999999999999 8888864210
Q ss_pred CCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 575 EGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
....++ .++++. +...+..+..++.++++.||+.+|++||++.|+++.++..
T Consensus 528 ----~~~l~~-~l~~G~----------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 528 ----TEELLE-FLKEGN----------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----HHHHHH-HHhcCC----------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111111 233322 1223445567888999999999999999999999999885
No 340
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.8e-32 Score=280.30 Aligned_cols=251 Identities=23% Similarity=0.274 Sum_probs=189.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcC---CCCCcccceEEEEecCc-----cEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAV---NHENLVPLRAYYYSMDE-----KLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~-----~~l 442 (663)
.+.||+|+||.||+|+.+ +++.||+|+++..... ...+.+|+.++.++ +|+|++++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 367999999999999965 4899999998744222 34566777766555 69999999999988776 899
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
+|||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||.+...
T Consensus 84 ~~e~~~~-~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 84 VFEHVDQ-DLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred Eehhccc-CHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999975 8988887543 235899999999999999999999998 999999999999999999999999999776
Q ss_pred CCCCC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc-------c
Q 006055 523 GPSST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW-------T 592 (663)
Q Consensus 523 ~~~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~ 592 (663)
..... ..++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE------ADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred cCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh------HHHHHHHHHHcCCCChHhcC
Confidence 54322 2245669999999988899999999999999999999999875322 122222221100 0
Q ss_pred cccc-chh-hhc--c----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 593 SEVF-DLE-LLR--Y----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 593 ~~~~-d~~-~~~--~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... ... ... . ....+....+.+++.+|+..||++||+++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000 000 000 0 0012234567889999999999999999999863
No 341
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-32 Score=284.69 Aligned_cols=246 Identities=15% Similarity=0.216 Sum_probs=174.2
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCcccC---H---------HHHHHHHHHhhcCCCCCcccceEEEEecC
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVTIS---E---------REFKDKIEGVGAVNHENLVPLRAYYYSMD 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~---~---------~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 438 (663)
.++||+|+||.||+|...+ +..+|+|........ + .....+...+..+.|+|++++++++....
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 96 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR 96 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence 4679999999999999654 345666653221110 1 11223334456779999999999766543
Q ss_pred ----ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEe
Q 006055 439 ----EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVS 514 (663)
Q Consensus 439 ----~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~ 514 (663)
..++++|++.. ++.+.+.... ..++.....|+.|++.||+|||+.+ |+||||||+|||++.++.++|+
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 97 CRMYYRFILLEKLVE-NTKEIFKRIK-----CKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred CCceEEEEEEehhcc-CHHHHHHhhc-----cCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCcEEEE
Confidence 23677777654 6666654321 2567888999999999999999998 9999999999999999999999
Q ss_pred ccccccccCCCC-----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHH
Q 006055 515 DFGLAHLVGPSS-----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWV 583 (663)
Q Consensus 515 Dfg~a~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~ 583 (663)
|||+++...... ...++..|+|||++.+..++.++|||||||+++||++|+.||....... ......
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~ 246 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAA 246 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHh
Confidence 999997653211 1236777999999999999999999999999999999999997642211 111100
Q ss_pred HHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 584 QSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
. ......+..... ........+.+++..|+..+|++||+++++++.+
T Consensus 247 ~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 247 K----CDFIKRLHEGKI----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred H----HHHHHHhhhhhh----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 000011110100 1112345688888999999999999999999876
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.9e-33 Score=293.07 Aligned_cols=260 Identities=21% Similarity=0.328 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 445 (663)
.+.||+|+||+||+|. ..+++.||||.+... ......+.+|+.+++.++|+||+++++++... ...++|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 3579999999999998 457899999998653 22345677899999999999999999987644 34799999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+. ++|.+++... ..+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 90 LMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred CCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 996 6898888643 24899999999999999999999998 999999999999999999999999999866433
Q ss_pred C----CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc---cccccc
Q 006055 526 S----TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW---TSEVFD 597 (663)
Q Consensus 526 ~----~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d 597 (663)
. ...++..|+|||.+.. ..++.++|||||||++|+|++|+.||..... ............... ...+.+
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY---VHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHHHHHhCCCChHHhhhcCc
Confidence 1 2235567999998764 4688999999999999999999999964311 000110111000000 000000
Q ss_pred hhh-------hc--cc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCCC
Q 006055 598 LEL-------LR--YQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPSS 645 (663)
Q Consensus 598 ~~~-------~~--~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~~ 645 (663)
... .. .. .......++.+++.+|+..+|++|||++|++++ ++.+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 000 00 00 011234567899999999999999999999998 66665443
No 343
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.8e-33 Score=289.53 Aligned_cols=250 Identities=26% Similarity=0.323 Sum_probs=187.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+|+.||+|.++..... ...+.+|+.++++++|+|++++++++.+. +..++||||+.
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 36799999999999995 56999999998644221 33567899999999999999999998765 45799999997
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+ +|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 92 ~-~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 164 (309)
T cd07845 92 Q-DLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP 164 (309)
T ss_pred C-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence 5 8888886432 35899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ---CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc------cc----
Q 006055 528 ---PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW------TS---- 593 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~---- 593 (663)
...+..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ...+..+..... ..
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE------IEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCCChhhchhhhc
Confidence 123556999999865 4578899999999999999999999964321 112221111000 00
Q ss_pred ----cccchhhhcccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 ----EVFDLELLRYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ----~~~d~~~~~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.......... ......+.+++.+|+..||++|||++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000000 1124566789999999999999999999984
No 344
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.6e-33 Score=286.33 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=186.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|++|.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++|+|++++++++.+....++||||++ +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 85 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-L 85 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-c
Confidence 35799999999999995 4789999999865422 23568899999999999999999999999999999999996 4
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~--- 526 (663)
+|.+++.... ...+++.....++.||+.||+|||+.+ ++||||+|+||+++. ++.+||+|||++.......
T Consensus 86 ~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (294)
T PLN00009 86 DLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF 160 (294)
T ss_pred cHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence 8888775432 234678888899999999999999998 999999999999985 5579999999997654321
Q ss_pred -CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh--cccccc-------
Q 006055 527 -TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD--EWTSEV------- 595 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------- 595 (663)
...++..|+|||++.+ ..++.++||||||+++|+|++|+.||...... ..+...... ......
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI------DELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCChhhccccccc
Confidence 2234567999998865 45788999999999999999999999653211 111111100 000000
Q ss_pred cchh--hhc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLE--LLR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~--~~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+.. ... ... ......++.+++.+|+..+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000 000 01123457889999999999999999999973
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.7e-32 Score=274.98 Aligned_cols=238 Identities=28% Similarity=0.461 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|++|.||++... +++.||+|.+..... ....+.+|++++.+++|+|++++++++.+....++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG 84 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence 468999999999999854 688999999976643 3457899999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++... ..+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 85 ~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 85 SLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred cHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 999998753 35899999999999999999999998 99999999999999999999999999987655432
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||...+..++.++||||+|+++++|++|+.||..... ..... ....... ....
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~~~-~~~~~~~-----------~~~~ 220 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAALF-RIVQDDH-----------PPLP 220 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHHHH-HHhccCC-----------CCCC
Confidence 2356679999999888888999999999999999999999864321 11111 1111100 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
......+.+++.+|+..+|++||++.|++.
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 122346778889999999999999999986
No 346
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.5e-33 Score=268.42 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEec---C--CcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE---M--GTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 445 (663)
...||+|+||.||+|.-. + ...+|+|+++..... .....+|+..++.++|||++.+..++.+ +...+++||
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd 108 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD 108 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence 467999999999999622 2 237999999865221 2456789999999999999999999877 677899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC----CceEEeccccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS----YEARVSDFGLAHL 521 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~----~~~kl~Dfg~a~~ 521 (663)
|.+. +|..+++-........++-.+...|..||+.|+.|||+.- |+||||||.|||+..+ |.+||+|+|+++.
T Consensus 109 YAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 109 YAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIADLGLARL 185 (438)
T ss_pred hhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence 9998 9999987655544567899999999999999999999998 9999999999999888 8999999999998
Q ss_pred cCCCC-------CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC---ChHHHHHHHHhh-
Q 006055 522 VGPSS-------TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV---DLPRWVQSIVKD- 589 (663)
Q Consensus 522 ~~~~~-------~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~- 589 (663)
+...- ....|..|.|||.+.+. .|+...||||.||++.||+|-++-|......-.. --...+.+++.-
T Consensus 186 ~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vL 265 (438)
T KOG0666|consen 186 FNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVL 265 (438)
T ss_pred hhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHc
Confidence 76532 22346679999999875 5788899999999999999999888754221111 112223333221
Q ss_pred --cccccccchhh-------------hcccC--hHHH-------HHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 590 --EWTSEVFDLEL-------------LRYQN--VEEE-------MVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 590 --~~~~~~~d~~~-------------~~~~~--~~~~-------~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
....++.+... ..... .... ...-+++..+++..||.+|.|+++++++.
T Consensus 266 G~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 266 GTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred CCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 00011111000 00000 0000 11256788899999999999999999864
No 347
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=289.37 Aligned_cols=251 Identities=25% Similarity=0.299 Sum_probs=188.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCH---------------HHHHHHHHHhhcCCCCCcccceEEEEecC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISE---------------REFKDKIEGVGAVNHENLVPLRAYYYSMD 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---------------~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 438 (663)
.+.||+|+||+||+|.. .+++.||||.++...... ..+.+|+++++.++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 45799999999999994 469999999986542211 24778999999999999999999999999
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccc
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGL 518 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~ 518 (663)
..++||||+. |+|.+++... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCCCCEEECCccc
Confidence 9999999997 5999988643 24889999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCC------------------CCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCCh
Q 006055 519 AHLVGPS------------------STPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDL 579 (663)
Q Consensus 519 a~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~ 579 (663)
++..... ....++..|+|||++.+. .++.++|||||||++|||++|+.||......+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~ 242 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---Q 242 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---H
Confidence 9765511 011235569999998764 46889999999999999999999996532211 1
Q ss_pred HHHHHHHHhhc----ccccccchhhh-----cccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 580 PRWVQSIVKDE----WTSEVFDLELL-----RYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 580 ~~~~~~~~~~~----~~~~~~d~~~~-----~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
...+....... +......+... .... ......++.+++.+|++.+|++||+++|++.
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 243 LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11111111100 00000000000 0000 0112456788999999999999999999998
No 348
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.4e-32 Score=287.93 Aligned_cols=255 Identities=23% Similarity=0.357 Sum_probs=188.4
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc---ccCHHHHHHHHHHhhcC-CCCCcccceEEEEec--CccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV---TISEREFKDKIEGVGAV-NHENLVPLRAYYYSM--DEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|... +|+.+|||++... ......+.+|+.++.++ +|+||+++++++... ...++||||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 467999999999999954 6899999988643 12234577899999999 999999999998654 3579999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
+ ++|.+++... .++|..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 92 E-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred c-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 7 5999988642 4789999999999999999999998 99999999999999999999999999976543221
Q ss_pred ---------CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHH----------
Q 006055 528 ---------PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIV---------- 587 (663)
Q Consensus 528 ---------~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---------- 587 (663)
..++..|+|||++.+ ..++.++||||||+++|+|++|+.||......+ ....+....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN---QLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHH
Confidence 124567999998754 457889999999999999999999996432211 000000000
Q ss_pred -hhcccccccc----hhhhc-ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhh
Q 006055 588 -KDEWTSEVFD----LELLR-YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEEL 641 (663)
Q Consensus 588 -~~~~~~~~~d----~~~~~-~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~ 641 (663)
.........+ ..... .........++.+++.+|+..+|++|||+.+++++ +..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 0000000000 00000 00001134578899999999999999999999986 4444
No 349
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.1e-33 Score=292.62 Aligned_cols=253 Identities=20% Similarity=0.340 Sum_probs=188.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEe----cCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYS----MDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey 446 (663)
.+.||+|+||.||+|. ..+|+.||+|++.... ...+.+.+|+.+++.++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 3579999999999999 4569999999987542 234567789999999999999999998753 3457999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+. |+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 90 ~~-~~l~~~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 90 ME-SDLHHIIHSDQ-----PLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred hh-hhHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 96 58999886432 4899999999999999999999998 9999999999999999999999999997654321
Q ss_pred --------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---------
Q 006055 527 --------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK--------- 588 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 588 (663)
...++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~---~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH---QLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH---HHHHHHHHhCCChhHhhhh
Confidence 1234566999999765 457899999999999999999999996532110 0000000000
Q ss_pred --hcccccccch-hhhcccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 589 --DEWTSEVFDL-ELLRYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 589 --~~~~~~~~d~-~~~~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
........+. ....... ......++.+++.+|++.+|++||++++++.+-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 0000000000 0000000 112346788999999999999999999999854
No 350
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.4e-32 Score=288.59 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=187.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+.++++++|+||+++++++... ...++||
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 36799999999999994 579999999986532 2234677899999999999999999988643 3469999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+.+ +|.+.+.. .+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 101 e~~~~-~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 101 ELMDA-NLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred eccCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 99965 88888753 2788889999999999999999998 99999999999999999999999999987654
Q ss_pred CCC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC---------CCChHHHHH-------H
Q 006055 525 SST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE---------GVDLPRWVQ-------S 585 (663)
Q Consensus 525 ~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~---------~~~~~~~~~-------~ 585 (663)
... ..++..|+|||.+.+..++.++|||||||++|+|++|+.||....... +.....+.. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 322 235667999999999899999999999999999999999996432100 000000000 0
Q ss_pred HHhhcccc------cccchhhhc---ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 586 IVKDEWTS------EVFDLELLR---YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 586 ~~~~~~~~------~~~d~~~~~---~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........ ..+...... .........++.+++.+|+..||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 000000000 00011234567899999999999999999999975
No 351
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.8e-32 Score=274.29 Aligned_cols=242 Identities=23% Similarity=0.363 Sum_probs=197.2
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|+||.||++.. .++..||+|++..... ..+.+.+|++.++.++|+|++++++.+......++|+||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 85 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD 85 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence 5799999999999995 4689999999876532 35678899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++..... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+....... .
T Consensus 86 L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 162 (258)
T cd08215 86 LSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT 162 (258)
T ss_pred HHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCCCcEEECCccceeecccCcceecc
Confidence 9999976421 1246899999999999999999999998 9999999999999999999999999997765442 1
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||...+..++.++|+||+|+++++|++|+.||.... ............. .. .+.
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~----------~~~ 225 (258)
T cd08215 163 VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKILKGQY-PP----------IPS 225 (258)
T ss_pred eeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHHhcCCC-CC----------CCC
Confidence 234566999999988889999999999999999999999986432 2222222222111 00 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....+.+++.+|+..+|++|||+.|++++
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 233467888999999999999999999874
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.8e-32 Score=279.92 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=190.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|++|+||+|... +++.||+|++..... ......+|+..+.+++ |+|++++++++.+....++||||+ +|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 367999999999999964 588999999876533 2334567889999998 999999999999999999999999 78
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.++.......
T Consensus 83 ~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 83 NLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred CHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 9999887543 235899999999999999999999998 99999999999999999999999999987654322
Q ss_pred CCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC----------CChHHHHHHHHhhccccccc
Q 006055 528 PNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG----------VDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 528 ~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 596 (663)
..++..|+|||++. ...++.++|+||||++++||++|+.||......+. .....|.............+
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF 237 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence 23456799999874 45578899999999999999999999865321100 00000111110000000000
Q ss_pred chhhhc--ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLR--YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~--~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...... .........++.+++.+|+..+|++|||++|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000 00001113568899999999999999999999874
No 353
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=9.5e-32 Score=283.79 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=189.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+++.++|+||+++++++.... ..++|+
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 99 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVM 99 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEe
Confidence 46899999999999994 5799999999875422 2356789999999999999999999986543 358999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+.. +|.+++. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 100 e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 100 PYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 99975 7776653 24789999999999999999999998 99999999999999999999999999976543
Q ss_pred CCC-CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc-c---------
Q 006055 525 SST-PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW-T--------- 592 (663)
Q Consensus 525 ~~~-~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~--------- 592 (663)
... ..++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+..++.... .
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07879 170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGPEFVQKLE 243 (342)
T ss_pred CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCCCHHHHHHhc
Confidence 322 234567999999866 4578899999999999999999999975321 111111111000 0
Q ss_pred ----ccccch-hhhcccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCC
Q 006055 593 ----SEVFDL-ELLRYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPS 644 (663)
Q Consensus 593 ----~~~~d~-~~~~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~ 644 (663)
...+.. ....... ......++.+++.+|+..||++||+++|++.+ ++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 244 DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 000000 0000000 01123457789999999999999999999976 7777654
No 354
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-33 Score=292.02 Aligned_cols=260 Identities=23% Similarity=0.310 Sum_probs=194.1
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey 446 (663)
+.||+|+||.||+++ ..+|+.||||.+... ....+...+|++++++++|+|||++++.=.+. ....+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 579999999999999 678999999998764 23356678999999999999999999875443 356899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc--CCCc--eEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT--KSYE--ARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~--~~~~--~kl~Dfg~a~~~ 522 (663)
|.+|||+..|.... +...+++.+.+.+..+++.||.|||+++ |+||||||.||++- .+|. -||+|||.|+..
T Consensus 99 C~gGsL~~~L~~PE--N~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPE--NAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred cCCCcHHHHhcCcc--cccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 99999999998654 4567999999999999999999999998 99999999999983 3343 699999999999
Q ss_pred CCCCC---CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc--c
Q 006055 523 GPSST---PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV--F 596 (663)
Q Consensus 523 ~~~~~---~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 596 (663)
.++.. ..||..|.+||.... ..|+..+|.|||||++||.+||..||..........-..|. +........+ .
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~--~~tkkp~~v~i~~ 252 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH--IITKKPSGVAIGA 252 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh--hhccCCCceeEee
Confidence 87653 457888999999984 78899999999999999999999999765433221112221 1111111000 0
Q ss_pred chhhh---------c--ccChHHHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHhh
Q 006055 597 DLELL---------R--YQNVEEEMVQLLQLAIDCSAQYPDNRP--SMSEVIKRIEEL 641 (663)
Q Consensus 597 d~~~~---------~--~~~~~~~~~~l~~l~~~C~~~dP~~RP--t~~ev~~~L~~~ 641 (663)
+.+.. + ..........+.+....++..+|++|. ...+....+..|
T Consensus 253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 11000 0 011123344556666677778888888 555555555443
No 355
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8e-32 Score=283.07 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=196.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecC-----ccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-----EKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e 445 (663)
.+.||+|++|.||+|... +++.||+|++.... ...+.+.+|+++++.++|+||+++++++.... ..++|||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e 84 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE 84 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence 367999999999999954 58999999987643 23467889999999999999999999987765 7899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++ +|.+++.... .+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~~-~l~~~l~~~~-----~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 85 LMET-DLHKVIKSPQ-----PLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred chhh-hHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9984 8988886432 6899999999999999999999998 999999999999999999999999999876544
Q ss_pred C-------CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc--c---
Q 006055 526 S-------TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW--T--- 592 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~--- 592 (663)
. ...++..|+|||.+.+. .++.++||||||+++++|++|+.||..... ......+..... .
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY------IDQLNLIVEVLGTPSEED 230 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH------HHHHHHHHHhcCCCChhH
Confidence 2 12245569999999887 789999999999999999999999965321 111111111000 0
Q ss_pred ---------ccccch-hhhc----ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCCC
Q 006055 593 ---------SEVFDL-ELLR----YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHPS 644 (663)
Q Consensus 593 ---------~~~~d~-~~~~----~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~~ 644 (663)
...+.. .... ..........+.+++.+||+.+|++||++++++++ ++.+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 000000 0000 00011134567889999999999999999999996 6666554
No 356
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.8e-32 Score=278.72 Aligned_cols=242 Identities=23% Similarity=0.291 Sum_probs=189.0
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||++.. .+|+.||+|++.... ...+.+.+|+.++..+ +|+||+++++++......++||
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 36799999999999985 368999999987532 1245678899999999 5899999999998888899999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++++|.+++.... .+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 85 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 85 DYINGGELFTHLSQRE-----RFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 9999999999987532 4788899999999999999999998 99999999999999999999999999976543
Q ss_pred CC-----CCCCCccccCccccCCC--CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 525 SS-----TPNRVAGYRAPEVTDPC--KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 525 ~~-----~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
.. ...++..|+|||.+... .++.++||||||+++|+|++|+.||..... ......+.........
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~~~~~~~~~~------ 229 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE--KNSQAEISRRILKSEP------ 229 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc--cccHHHHHHHhhccCC------
Confidence 22 12356679999998653 467899999999999999999999864221 1122222222222111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.........+.+++.+|+..+|++|| ++++++.+
T Consensus 230 ------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 230 ------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 01112234677888899999999997 67777664
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.1e-32 Score=283.40 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=187.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|. ..+|+.||+|++.... ...+.+.+|++++..++|||++++++++.. ....++|+||+.
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~- 93 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG- 93 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-
Confidence 3689999999999998 4579999999886432 234678889999999999999999999866 456889999984
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
++|.++++.. .+++.....++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||.+....... ..
T Consensus 94 ~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 94 TDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 5899888642 3788888899999999999999998 9999999999999999999999999997654432 23
Q ss_pred CCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC---------CChHHHHHHHHhhcccccccch
Q 006055 529 NRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG---------VDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 529 ~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
.++..|+|||++.+ ..++.++||||||+++|+|++|+.||........ ....++................
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 35667999998765 5688999999999999999999999964321000 0001111111000000000000
Q ss_pred hhhcccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........ .....++.+++.+|+..+|++||++++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 1123578889999999999999999999885
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9e-32 Score=273.31 Aligned_cols=239 Identities=20% Similarity=0.268 Sum_probs=187.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc------cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT------ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 445 (663)
.+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++++++|+||+++++++.+. ...++|+|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 46899999999999994 569999999875321 1234688899999999999999999998764 34789999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++++|.+++.... .+++.....++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 87 ~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 87 YMPGGSIKDQLKAYG-----ALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred eCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 999999999987432 4788899999999999999999998 999999999999999999999999999765321
Q ss_pred -------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 -------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
....++..|+|||++.+...+.++|+|||||+++||++|+.||..... ...+.........
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~------ 227 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA------MAAIFKIATQPTK------ 227 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH------HHHHHHHHcCCCC------
Confidence 112356679999999988889999999999999999999999964211 1111111111100
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+......+.+++.+|+. +|.+||+..+++.|
T Consensus 228 ----~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 ----PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ----CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 01122234567788889998 57999999988764
No 359
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5.1e-32 Score=272.49 Aligned_cols=234 Identities=28% Similarity=0.339 Sum_probs=190.2
Q ss_pred cccccceEEEEEEec-CCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 378 LGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 378 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
||+|+||.||++... +++.+|+|.+..... ....+..|+++++.++|+|++++++.+......++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999954 589999999876532 235788999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
.+++.... .+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 81 FSHLSKEG-----RFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 99997542 4899999999999999999999988 999999999999999999999999999776543 123
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||...+...+.++|+||||+++|+|++|+.||..... ......+..... .....
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~~------------~~~~~ 215 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILKDPL------------RFPEF 215 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhcCCC------------CCCCC
Confidence 356679999999888889999999999999999999999964321 222222222110 11111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH---HHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSM---SEVIK 636 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~---~ev~~ 636 (663)
....+.+++.+|+..||++||++ +++.+
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 23467888999999999999999 55543
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.4e-32 Score=274.83 Aligned_cols=242 Identities=22% Similarity=0.294 Sum_probs=188.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||++... .+..+++|.++... .....+..|+.+++.++|||++++++++.+.+..++||||+
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC 84 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence 367999999999999854 34556666655321 12345677899999999999999999999888999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++++|.++++.... ....+++..++.++.|++.||.|||+.+ ++|+||||+||++++ +.++|+|||+++......
T Consensus 85 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 85 EGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred CCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec-CCEeecccCceeecCCCcc
Confidence 99999998875321 2346899999999999999999999998 999999999999975 569999999987664332
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...++..|+|||...+..++.++|+||||+++++|++|..||... .............. .
T Consensus 161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~-----------~ 223 (260)
T cd08222 161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ------NFLSVVLRIVEGPT-----------P 223 (260)
T ss_pred cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHcCCC-----------C
Confidence 233566799999998888889999999999999999999998532 12222222221110 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..+|++||++.|++++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 224 SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1112344578889999999999999999999874
No 361
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.9e-33 Score=306.99 Aligned_cols=239 Identities=23% Similarity=0.322 Sum_probs=176.5
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEec---------------
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--------------- 437 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------- 437 (663)
++||+||||.||+++. -||+.||||++.-.. .....+.+|+..+++|+|||||+++..|.+.
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~ 564 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE 564 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence 6899999999999994 489999999987653 3346688999999999999999988655110
Q ss_pred --------------------------------------------------------------------------------
Q 006055 438 -------------------------------------------------------------------------------- 437 (663)
Q Consensus 438 -------------------------------------------------------------------------------- 437 (663)
T Consensus 565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~ 644 (1351)
T KOG1035|consen 565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD 644 (1351)
T ss_pred hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence
Q ss_pred ------------------------CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcc
Q 006055 438 ------------------------DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNV 493 (663)
Q Consensus 438 ------------------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~i 493 (663)
...|+-||||+...+.++++.+... -.-...++++.+|++||.|+|++| |
T Consensus 645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGLaYIH~~g--i 718 (1351)
T KOG1035|consen 645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGLAYIHDQG--I 718 (1351)
T ss_pred chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHHHHHHhCc--e
Confidence 0014667888887777777654311 035677889999999999999999 9
Q ss_pred eecCCCCCCEEEcCCCceEEeccccccccC----C------------------CCCCCCCccccCccccCCC---CCCCc
Q 006055 494 SHGNIKSSNILLTKSYEARVSDFGLAHLVG----P------------------SSTPNRVAGYRAPEVTDPC---KVSQK 548 (663)
Q Consensus 494 iHrdlk~~Nill~~~~~~kl~Dfg~a~~~~----~------------------~~~~~~~~~y~aPE~~~~~---~~~~~ 548 (663)
|||||||.||++|+++.+||+|||+|+... . .....||.-|+|||++.+. .|+.|
T Consensus 719 IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K 798 (1351)
T KOG1035|consen 719 IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK 798 (1351)
T ss_pred eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence 999999999999999999999999998721 0 0112356669999999765 49999
Q ss_pred chhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCC
Q 006055 549 ADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNR 628 (663)
Q Consensus 549 ~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R 628 (663)
+|+||+|||++||+. ||....+ -...+.+ +++..+...- ....+....-.+++.++++.||.+|
T Consensus 799 iDmYSLGIVlFEM~y---PF~TsME-----Ra~iL~~-LR~g~iP~~~-------~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 799 IDMYSLGIVLFEMLY---PFGTSME-----RASILTN-LRKGSIPEPA-------DFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred hhhHHHHHHHHHHhc---cCCchHH-----HHHHHHh-cccCCCCCCc-------ccccccchHHHHHHHHHhcCCCccC
Confidence 999999999999985 5654222 1122222 1222221110 0112233345678889999999999
Q ss_pred CCHHHHHH
Q 006055 629 PSMSEVIK 636 (663)
Q Consensus 629 Pt~~ev~~ 636 (663)
||+.|++.
T Consensus 863 PtA~eLL~ 870 (1351)
T KOG1035|consen 863 PTATELLN 870 (1351)
T ss_pred CCHHHHhh
Confidence 99999987
No 362
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.4e-32 Score=281.21 Aligned_cols=253 Identities=24% Similarity=0.296 Sum_probs=187.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecC----------cc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD----------EK 440 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~ 440 (663)
.+.||+|+||.||+|... +|+.||+|.++... .....+.+|+++++.++|||++++++++.+.. ..
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 91 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAF 91 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcE
Confidence 468999999999999964 68999999986542 23456788999999999999999999987654 68
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
++|+||+++ ++...+... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||.+.
T Consensus 92 ~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 92 YLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred EEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCcEEeCcccccc
Confidence 999999986 777776543 235899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCC-----CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 521 LVGPSST-----PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 521 ~~~~~~~-----~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
....... ...+..|+|||.+.+ ..++.++|||||||+++||++|+.||..... ......+...........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 241 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE---LAQLELISRLCGSPCPAV 241 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCChhh
Confidence 6643321 123556999998764 3568899999999999999999999964221 111111111111100000
Q ss_pred ---cc--------chhhhc----ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 595 ---VF--------DLELLR----YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 595 ---~~--------d~~~~~----~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+. +..... .......+..+.+++.+|+..+|++||++++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 000000 00001124567889999999999999999999863
No 363
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-33 Score=288.14 Aligned_cols=238 Identities=21% Similarity=0.325 Sum_probs=194.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
...||+|.|+.|.+|. ..++..||+|.+.+.... ...+.+|+++|..++|||||+++.+.......++||||+.+|
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~g 140 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGG 140 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCc
Confidence 3579999999999999 456999999999876433 245889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---T 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 527 (663)
.+++++.... .........++.|+..|++|||+++ |+|||||++||||+.+.++||+|||++.++.... +
T Consensus 141 e~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt 213 (596)
T KOG0586|consen 141 ELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQT 213 (596)
T ss_pred hhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccccceeeeccccceeecccccccc
Confidence 9999998654 2445778889999999999999998 9999999999999999999999999999887653 3
Q ss_pred CCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 PNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..+++.|.|||++.+..| ++++|+||+|+++|-|+.|..||++..- ...-..++...+ .-+
T Consensus 214 ~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------k~Lr~rvl~gk~------------rIp 275 (596)
T KOG0586|consen 214 FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------KELRPRVLRGKY------------RIP 275 (596)
T ss_pred cCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc------ccccchheeeee------------ccc
Confidence 446677999999999775 6789999999999999999999975321 111111111111 001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.-...+..+++++.+..+|.+|++++++.++
T Consensus 276 ~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 276 FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1112355677779999999999999999875
No 364
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.6e-32 Score=282.19 Aligned_cols=250 Identities=24% Similarity=0.291 Sum_probs=183.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecC--------ccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMD--------EKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~l 442 (663)
.++||+|+||.||+|.. .+++.||+|++..... ....+.+|+++++.++|+||+++++++.+.. ..++
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~l 92 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYM 92 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEE
Confidence 35799999999999995 4689999999864322 2346778999999999999999999875543 3589
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
|+||+.. ++...+.... ..+++..+..++.|+++||.|||+.+ |+||||||+||++++++.++|+|||+++..
T Consensus 93 v~~~~~~-~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 93 VTPYMDH-DLSGLLENPS----VKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred EEecCCc-CHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 9999875 7777776432 35899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCC---------------CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHH
Q 006055 523 GPSST---------------PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 523 ~~~~~---------------~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
..... ..++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~------~~~~~~ 239 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI------DQLHLI 239 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH
Confidence 43211 112455999998765 45788999999999999999999998643221 111111
Q ss_pred Hhhc---cc---------ccccc-hhhhcc-cC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 587 VKDE---WT---------SEVFD-LELLRY-QN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 587 ~~~~---~~---------~~~~d-~~~~~~-~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .. ....+ ...... .. .......+.+++.+|+..+|++|||+.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1100 00 00000 000000 00 01122567889999999999999999999863
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.2e-32 Score=278.19 Aligned_cols=245 Identities=22% Similarity=0.255 Sum_probs=191.1
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||++.. .+++.||||.++... ...+.+.+|+.++.++ +|+||+++++.+......++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 36799999999999874 357899999987532 1235678899999999 5999999999998888999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++|+|.+++... ..+++.....++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 85 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 85 DYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred ecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999998643 24789999999999999999999988 99999999999999999999999999876543
Q ss_pred CCC-----CCCCccccCccccCCCC--CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 525 SST-----PNRVAGYRAPEVTDPCK--VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 525 ~~~-----~~~~~~y~aPE~~~~~~--~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
... ..++..|+|||...+.. .+.++||||||++++||++|..||...... .......+......
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~------- 228 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKSK------- 228 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHccC-------
Confidence 221 23466799999987654 678999999999999999999998642111 11112222211111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
..........+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 229 -----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 -----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 00111123467788899999999999999888776654
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=2.9e-31 Score=280.13 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=189.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||.||++. ..+|+.||||++...... ...+.+|+++++.++||||+++++++.... ..++||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVM 99 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEE
Confidence 3679999999999998 557999999998653222 356789999999999999999999886543 358999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 100 e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 100 PFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred ecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 998 6799888863 24889999999999999999999998 99999999999999999999999999986644
Q ss_pred CCC-CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc------cccc
Q 006055 525 SST-PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT------SEVF 596 (663)
Q Consensus 525 ~~~-~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 596 (663)
... ..++..|+|||.+.+ ..++.++|+||||+++|++++|+.||..... ......+...... ..+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH------LDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCCCHHHHHhhc
Confidence 322 335667999999876 4578899999999999999999999964321 1111111110000 0000
Q ss_pred ch---h----hhcc--c----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHhhCC
Q 006055 597 DL---E----LLRY--Q----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK--RIEELHP 643 (663)
Q Consensus 597 d~---~----~~~~--~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~--~L~~~~~ 643 (663)
.. . .... . .......++.+++.+|+..||++|||+.++++ .++...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 245 SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 0 0000 0 00122345788999999999999999999995 3444433
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=9.9e-32 Score=275.50 Aligned_cols=249 Identities=25% Similarity=0.339 Sum_probs=191.8
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.||+|++|.||+|... +++.||+|.+.... ...+.+..|+.+++.++|+|++++++++.+....++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 57999999999999954 59999999987642 224667889999999999999999999999999999999998 59
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++.... ..+++..+..++.+++.||.|||+.+ |+||||+|+||++++++.++|+|||.++.......
T Consensus 84 l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 84 LKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 999997542 35899999999999999999999998 99999999999999999999999999977644321
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---cccc------cc--
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTS------EV-- 595 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~-- 595 (663)
...+..|+|||.+.+. .++.++||||||++++||++|+.||..... ...+..+... .... ..
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE------IDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 2234569999998766 788999999999999999999999865321 1111111110 0000 00
Q ss_pred cchhhhcc------cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRY------QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~------~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+...... .........+.+++.+|+..+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 0001124578899999999999999999999873
No 368
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=4.5e-32 Score=277.63 Aligned_cols=238 Identities=24% Similarity=0.359 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++.+++ |+||+++++++...+..++||||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 35799999999999995 479999999987532 22456888999999998 9999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++........
T Consensus 86 ~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 86 NGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 999999997542 5899999999999999999999998 99999999999999999999999999876543221
Q ss_pred -----------------------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHH
Q 006055 528 -----------------------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQ 584 (663)
Q Consensus 528 -----------------------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 584 (663)
..++..|+|||...+..++.++||||||++++++++|+.||..... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~ 232 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE------YLTFQ 232 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH------HHHHH
Confidence 1234569999999888889999999999999999999999975321 11111
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSM----SEVIKR 637 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~----~ev~~~ 637 (663)
...... ...+......+.+++.+|+..+|++||++ ++++++
T Consensus 233 ~~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 233 KILKLE------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHhcC------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 211111 01111224467889999999999999999 777653
No 369
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=2.1e-31 Score=281.48 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=185.0
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEEE
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVYD 445 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 445 (663)
+.||+|+||.||++. ..+|+.||+|+++.... ..+.+.+|++++.+++|+||+++++++... ...+++++
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~ 102 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 102 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEeh
Confidence 579999999999998 46799999999875422 245677899999999999999999988643 23577777
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
++ +++|.+++... .+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 103 ~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~ 173 (345)
T cd07877 103 LM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 173 (345)
T ss_pred hc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCCCCEEEeccccccccccc
Confidence 76 77998888642 3899999999999999999999998 999999999999999999999999999765443
Q ss_pred C-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc--ccc----ccc
Q 006055 526 S-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW--TSE----VFD 597 (663)
Q Consensus 526 ~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~d 597 (663)
. ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+..... ... +.+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 174 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH------IDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHhhccc
Confidence 2 2345667999999866 4678899999999999999999999964221 111111110000 000 000
Q ss_pred h-------hhhcc--cCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 598 L-------ELLRY--QNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 598 ~-------~~~~~--~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
. .+... ... .....++.+++.+|+..||++||++.+++.+=
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 0 00000 000 01234678899999999999999999999863
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=1.3e-31 Score=282.69 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=182.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEec--------------C
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--------------D 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------~ 438 (663)
.+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|+++++.++||||+++++++... .
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 36799999999999994 568999999986553 3346788999999999999999999876543 3
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEeccc
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFG 517 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg 517 (663)
..++||||++ ++|.+++... .+++.....++.||+.||.|||+.+ |+||||||+||+++ +++.+|++|||
T Consensus 90 ~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 90 SVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred eEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCceEEECCcc
Confidence 4689999997 5898888532 4789999999999999999999998 99999999999997 45578999999
Q ss_pred cccccCCCC-------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh
Q 006055 518 LAHLVGPSS-------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 518 ~a~~~~~~~-------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
.++...... ...++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~------~~~~~~~~~ 234 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL------EQMQLILES 234 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHh
Confidence 997653321 1224556999998654 56788999999999999999999999653211 111111100
Q ss_pred ccc--------------ccccchhhhcccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 EWT--------------SEVFDLELLRYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ~~~--------------~~~~d~~~~~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
... ............. ......++.+++.+|+..||++|||++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000 0000000000000 01123467789999999999999999999963
No 371
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=7.7e-32 Score=269.26 Aligned_cols=219 Identities=21% Similarity=0.189 Sum_probs=174.0
Q ss_pred ccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhHhhccC
Q 006055 381 GTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGN 459 (663)
Q Consensus 381 G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~ 459 (663)
|.||.||++. ..+++.||+|.+.... .+..|...+....|||++++++++.+.+..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 8999999999 4678999999987642 2334445555567999999999999999999999999999999998753
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCccccCcc
Q 006055 460 KGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVAGYRAPE 538 (663)
Q Consensus 460 ~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE 538 (663)
. .+++.....++.|++.||.|||+.+ |+||||||+||+++.++.++++|||.+....... ....+..|+|||
T Consensus 80 ~-----~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 80 L-----NIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred c-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 2 4899999999999999999999998 9999999999999999999999999886655432 233455699999
Q ss_pred ccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHH
Q 006055 539 VTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAI 618 (663)
Q Consensus 539 ~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~ 618 (663)
...+..++.++||||+|+++|||++|+.|+....... .. ..... .+......+.+++.
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~-----~~~~~-----~~~~~~~~~~~li~ 210 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NT-----HTTLN-----IPEWVSEEARSLLQ 210 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------cc-----ccccC-----CcccCCHHHHHHHH
Confidence 9988888999999999999999999998875321100 00 00000 01112346778888
Q ss_pred HccCCCCCCCCCHH
Q 006055 619 DCSAQYPDNRPSMS 632 (663)
Q Consensus 619 ~C~~~dP~~RPt~~ 632 (663)
+|++.||++||++.
T Consensus 211 ~~l~~dp~~R~~~~ 224 (237)
T cd05576 211 QLLQFNPTERLGAG 224 (237)
T ss_pred HHccCCHHHhcCCC
Confidence 99999999999973
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-31 Score=281.23 Aligned_cols=255 Identities=22% Similarity=0.282 Sum_probs=183.0
Q ss_pred hcccccccceEEEEEEec-C--CcEEEEEEecCcc---cCHHHHHHHHHHhhcC-CCCCcccceEEEEec----CccEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-M--GTIVAVKRLKDVT---ISEREFKDKIEGVGAV-NHENLVPLRAYYYSM----DEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~--g~~vavK~l~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~~~lv 443 (663)
.+.||+|+||.||++... . +..||+|++.... ...+.+.+|++++.++ +||||+++++++... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 367999999999999954 4 7899999987532 2245678899999998 599999999875432 346788
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
+||+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 85 EELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred Eeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 88886 5899988643 35899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC--------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCC---------CCChHHHHHH
Q 006055 524 PSS--------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEE---------GVDLPRWVQS 585 (663)
Q Consensus 524 ~~~--------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~ 585 (663)
... ...++..|+|||++.+ ..++.++||||+||++|+|++|+.||......+ +.....+...
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 321 1235667999998765 467899999999999999999999986532100 0000000000
Q ss_pred HHhhcccccccchhhhcccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 586 IVKDEWTSEVFDLELLRYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.................... ......+.+++.+|++.+|++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000000000000 0123468889999999999999999999864
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=8.7e-32 Score=284.20 Aligned_cols=248 Identities=22% Similarity=0.317 Sum_probs=187.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCc------cEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDE------KLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ 444 (663)
...||+|++|.||+|.. .+++.||||++..... ....+.+|+.+++.++|+|++++++++...+. .++|+
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVT 99 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEE
Confidence 36799999999999995 4689999999865322 23557789999999999999999998766554 79999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+ +++|.+++.. ..+++..+..++.|+++||.|||+.+ |+||||||+||++++++.++|+|||++.....
T Consensus 100 e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 100 HLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred ecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 998 5699998874 24899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc--ccc----cc
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW--TSE----VF 596 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 596 (663)
.. ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ...+..+..... ... +.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~ 244 (343)
T cd07851 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH------IDQLKRIMNLVGTPDEELLQKIS 244 (343)
T ss_pred cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHhcCCCCHHHHhhcc
Confidence 32 2335566999999865 3678899999999999999999999964321 111221111000 000 00
Q ss_pred ch---------hhhcccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DL---------ELLRYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~---------~~~~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. ....... ......++.+++.+|+..+|++|||+.||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 0000000 01124578899999999999999999999874
No 374
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=301.75 Aligned_cols=242 Identities=24% Similarity=0.306 Sum_probs=193.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.|..++. .++++||.|++.+.. .....|..|.++|..-+.+-|+.++-.|.+..+.|+|||||+|
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pG 159 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPG 159 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccC
Confidence 57899999999999995 568999999998752 3346799999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|-.++.... ++++.++..++..|..||+-||+.| +|||||||+|||||..|++||+|||.+-.+...
T Consensus 160 GDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~ 232 (1317)
T KOG0612|consen 160 GDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR 232 (1317)
T ss_pred chHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence 99999998643 5899999999999999999999999 999999999999999999999999998777643
Q ss_pred -CCCCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 526 -STPNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
....||+.|++||++.. +.|+..+|.||+||++|||+.|..||+.. .++.-...++..... +..+
T Consensus 233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~KIm~hk~~---l~FP 303 (1317)
T KOG0612|consen 233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGKIMNHKES---LSFP 303 (1317)
T ss_pred eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHHHhchhhh---cCCC
Confidence 34568999999999842 56889999999999999999999999863 234444444433211 1111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPS---MSEVIKRI 638 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt---~~ev~~~L 638 (663)
.....+++..+| |..-+ -+|+.|.. ++++..|-
T Consensus 304 --~~~~VSeeakdL---I~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 304 --DETDVSEEAKDL---IEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred --cccccCHHHHHH---HHHHh-cChhhhcccccHHHHHhCc
Confidence 111233444444 43322 45778877 99888875
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=288.03 Aligned_cols=243 Identities=24% Similarity=0.367 Sum_probs=201.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEe-----cCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYS-----MDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~~~~lv~ey~ 447 (663)
.++||.|.+|.||+++ .++|+.+|||++......+.+++.|.++++.. .|||++.++|+|.. ++++|||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 4789999999999999 67899999999988777788899999999887 69999999999863 56789999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC---
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP--- 524 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~--- 524 (663)
.+|+..|+++... ...+.|..+..|+..+++|+.|||... ++|||||-.|||++.++.+|++|||.+..+..
T Consensus 104 ~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~g 178 (953)
T KOG0587|consen 104 GGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVG 178 (953)
T ss_pred CCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEeccCcEEEeeeeeeeeeecccc
Confidence 9999999998765 356999999999999999999999987 99999999999999999999999999876533
Q ss_pred -CCCCCCCccccCccccCCC-----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 525 -SSTPNRVAGYRAPEVTDPC-----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 525 -~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
..+..+|+.|||||++... .|+.++|+||+|++..||.-|.+|+.++.... ..+. +..-.-+
T Consensus 179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---------aLF~---IpRNPPP 246 (953)
T KOG0587|consen 179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---------ALFL---IPRNPPP 246 (953)
T ss_pred cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---------hhcc---CCCCCCc
Confidence 3556788999999998643 46778999999999999999999986543211 1100 0000001
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.....++.++|..|+.+|.++||++.++++|
T Consensus 247 ---kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 247 ---KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---cccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 112245567789999999999999999999998864
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.5e-31 Score=302.47 Aligned_cols=139 Identities=24% Similarity=0.403 Sum_probs=124.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.||+|... +++.||||+++..... ...+..|+.++..++|+||+++++++......++||||+.+
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g 88 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG 88 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence 367999999999999954 6899999998754221 35688899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
++|.++++... .+++...+.++.||+.||.|||..+ |+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~L~~li~~~~-----~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 89 GDVKSLLHIYG-----YFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999997532 4788999999999999999999998 9999999999999999999999999875
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=233.67 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=187.2
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|.||+||+|+ ..+++.||+|++.-...+ .....+|+-+++.++|+|||++++....++...+|+||+..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq- 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence 4789999999999999 667899999998754322 46788999999999999999999999999999999999976
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|..+.....+ .++.......+.|+.+||.++|++. +.|||+||.|.||+.+|+.|++|||+++..+-..
T Consensus 86 dlkkyfdslng----~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 86 DLKKYFDSLNG----DLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred HHHHHHHhcCC----cCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 88887765443 4788899999999999999999998 9999999999999999999999999998776542
Q ss_pred CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHh-------hccccc--c
Q 006055 527 TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVK-------DEWTSE--V 595 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~ 595 (663)
....|..|.+|.++-+. -|++..|+||-||++.|+.. |++.|.+ .+..+.+.++++ +.|+.- .
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg------~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG------NDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC------CcHHHHHHHHHHHhCCCccccCCccccC
Confidence 23346669999998765 58889999999999999998 5554533 344444444432 122111 1
Q ss_pred cchhhh-ccc---ChHHHH----HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELL-RYQ---NVEEEM----VQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~-~~~---~~~~~~----~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.|.... .++ .....+ ..=.++.++.+.-+|.+|.++++.+++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 111100 000 011111 111244445555679999999998874
No 378
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-32 Score=259.77 Aligned_cols=190 Identities=25% Similarity=0.357 Sum_probs=166.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc-CH---HHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-SE---REFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|.||.|-+++ ..+|+.+|+|++++... .+ ..-..|-+++...+||.+..+.-.|...+..++||||+.+
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG 252 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG 252 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence 4789999999999988 66899999999987632 22 3345678889999999999999889999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|.|.-+|...+ .+++......-..|..||.|||+++ |++||||-+|.|+|.+|++||.|||+++.--..
T Consensus 253 GeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~ 325 (516)
T KOG0690|consen 253 GELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTT 325 (516)
T ss_pred ceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccCCceEeeecccchhccccccee
Confidence 99998887643 5788888888999999999999998 999999999999999999999999999764322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
.+..+|+.|+|||++....|+..+|.|.+|||+|||++|+.||...
T Consensus 326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 2345788899999999999999999999999999999999999753
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=278.60 Aligned_cols=233 Identities=27% Similarity=0.264 Sum_probs=185.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
...+|.|+|+.|-++. ..+++..+||++.+. ..+-.+|+.++... +|||++++.+.+.+..+.++|||++.++-+
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~el 403 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGEL 403 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHH
Confidence 3469999999998888 567899999999765 22344566555544 799999999999999999999999999988
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE-cCCCceEEeccccccccCCCC-CCCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL-TKSYEARVSDFGLAHLVGPSS-TPNR 530 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill-~~~~~~kl~Dfg~a~~~~~~~-~~~~ 530 (663)
.+.+...+ .....+..|+.+|+.|+.|||.+| ++||||||+|||+ +..++++|+|||.++...+.. +...
T Consensus 404 l~ri~~~~------~~~~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~ 475 (612)
T KOG0603|consen 404 LRRIRSKP------EFCSEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPAL 475 (612)
T ss_pred HHHHHhcc------hhHHHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccch
Confidence 88776543 222677789999999999999998 9999999999999 689999999999999887763 2345
Q ss_pred CccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHH
Q 006055 531 VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEM 610 (663)
Q Consensus 531 ~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 610 (663)
|..|.|||+.....|++.+|+||||++||+|++|+.||...... ...... ++... .....+
T Consensus 476 t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----~ei~~~-i~~~~-------------~s~~vS 536 (612)
T KOG0603|consen 476 TLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----IEIHTR-IQMPK-------------FSECVS 536 (612)
T ss_pred hhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----HHHHHh-hcCCc-------------cccccC
Confidence 67799999999999999999999999999999999999753322 111111 11110 012223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 611 VQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 611 ~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+++.+|++.||.+||+|.++..+
T Consensus 537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 537 DEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHHHHHHHhccCChhhCcChhhhccC
Confidence 455667779999999999999999873
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=274.82 Aligned_cols=240 Identities=24% Similarity=0.377 Sum_probs=189.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||.|.||+||-|+ .++|+.||||.+.+.+ ..+..+..|+.++..+.||.||.+..-|+..+..++|||.+.+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 6799999999999999 5679999999987653 33577999999999999999999999999999999999998764
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccccCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~~~-- 525 (663)
=|+-+|...++ .+++.....+..||+.||.|||.++ |+|+||||+|||+.... .+||||||+|++.++.
T Consensus 649 MLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 649 MLEMILSSEKG----RLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred HHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 44555554432 4888888999999999999999998 99999999999996543 5999999999998875
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
.+..+|+.|+|||++..+.|...-|+||.||++|.-++|..||... .++.+.+++. . +-. ...
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-----EdIndQIQNA----a----FMy---Pp~ 786 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-----EDINDQIQNA----A----FMY---PPN 786 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-----cchhHHhhcc----c----ccc---CCC
Confidence 3466899999999999999999999999999999999999999753 2333322211 0 000 011
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.-.+...+.+++|...++..=.+|.+.++.+.
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 12233344556666777777777888776554
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-32 Score=266.66 Aligned_cols=253 Identities=26% Similarity=0.324 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC--C----CcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH--E----NLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h--~----niv~l~~~~~~~~~~~lv~ey~ 447 (663)
...+|+|.||.|-... .+.+..||||+++....-.+..+-|++++.++.+ | .+|.+.++|.-.++.++|+|.+
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell 173 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL 173 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc
Confidence 4579999999999988 4457999999998776556677889999999832 2 3677888898899999999976
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC--------------------
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-------------------- 507 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-------------------- 507 (663)
+-|+.+++..+. ..+++...++.|+.|++++++|||+.+ ++|-||||+|||+.+
T Consensus 174 -G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~k 247 (415)
T KOG0671|consen 174 -GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLK 247 (415)
T ss_pred -ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceEEEeccCCccceeccCC
Confidence 449999998654 567899999999999999999999998 999999999999942
Q ss_pred CCceEEeccccccccCCCCCC-CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHH
Q 006055 508 SYEARVSDFGLAHLVGPSSTP-NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
+..++|+|||.|++.....+. ..|.-|.|||++.+-.++.++||||+||||+|+.||...|+.-.+.+.. ..++.+
T Consensus 248 s~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL---aMMerI 324 (415)
T KOG0671|consen 248 STAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL---AMMERI 324 (415)
T ss_pred CcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHH---HHHHHh
Confidence 335899999999987766543 4566799999999999999999999999999999999998764332211 222222
Q ss_pred Hhhcccccc--------------cc------------------hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006055 587 VKDEWTSEV--------------FD------------------LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEV 634 (663)
Q Consensus 587 ~~~~~~~~~--------------~d------------------~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev 634 (663)
+. ..+..+ +| +.........++..+|++|+.+++..||.+|+|+.|+
T Consensus 325 lG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 325 LG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 21 011000 11 0000011224556789999999999999999999999
Q ss_pred HHH
Q 006055 635 IKR 637 (663)
Q Consensus 635 ~~~ 637 (663)
+.|
T Consensus 404 L~H 406 (415)
T KOG0671|consen 404 LSH 406 (415)
T ss_pred hcC
Confidence 875
No 382
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-31 Score=239.77 Aligned_cols=204 Identities=23% Similarity=0.370 Sum_probs=163.9
Q ss_pred cCHHHHHHHhhcccccccceEEEEEE-ecCCcEEEEEEecCccc--CHHHHHHHHHHh-hcCCCCCcccceEEEEecCcc
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI--SEREFKDKIEGV-GAVNHENLVPLRAYYYSMDEK 440 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~ 440 (663)
|++.+-.....+.||+|+||.|-+.+ ..+|+..|||++...-. ..+...+|+.+. +...+|.+|.++|.+......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 44443333456789999999998877 56799999999976532 345667777764 455899999999999999999
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
++.||.|.. ||+.+.+.--. ....+++...-+||..|.+||.|||++- .+||||+||+|||++.+|.+|+||||.+.
T Consensus 121 wIcME~M~t-Sldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~kL-~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHSKL-SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHHHh-hhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999976 88776543221 1345889999999999999999999883 59999999999999999999999999998
Q ss_pred ccCCCCCC---CCCccccCccccCC----CCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 521 LVGPSSTP---NRVAGYRAPEVTDP----CKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 521 ~~~~~~~~---~~~~~y~aPE~~~~----~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
.+.++-.. .+-..|||||.+.. ..|+.|+||||+|+.+.||.+++.||+.+
T Consensus 198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 198 YLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred eehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 77654221 22234999999854 46899999999999999999999999754
No 383
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.4e-32 Score=254.36 Aligned_cols=256 Identities=23% Similarity=0.308 Sum_probs=186.4
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEec--------CccEEE
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYSM--------DEKLLV 443 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~lv 443 (663)
.+||+|.||+||+|+ .++|++||+|+.--. .--.....+|++++..++|+|++.+++.|... ...++|
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV 102 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV 102 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence 589999999999999 456888999875321 11234567899999999999999999887532 236899
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|++++. +|.-+|.... ..++..++.+++.++..||.|+|... |+|||+|+.|+||+.++.+||+|||+++...
T Consensus 103 f~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 103 FDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred HHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCCceEEeecccccccee
Confidence 999988 8998886532 45888999999999999999999997 9999999999999999999999999997654
Q ss_pred CCCCC--C------CCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 524 PSSTP--N------RVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 524 ~~~~~--~------~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
..... . .|..|.+||.+.+ +.|+.+.|||.-||++.||.||.+-+.+..+.....+...+-..+..+.+.+
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 43221 1 2455999999877 4689999999999999999999988876543221111111100001111111
Q ss_pred ccchhhhc-----------ccChHHHHH------HHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 595 VFDLELLR-----------YQNVEEEMV------QLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 595 ~~d~~~~~-----------~~~~~~~~~------~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+...++.. .....+..+ +..+++.+++..||.+|+++.+++.+-
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 11111110 001122222 456778899999999999999998764
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.1e-30 Score=255.22 Aligned_cols=234 Identities=29% Similarity=0.376 Sum_probs=190.0
Q ss_pred cceEEEEEEec-CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhHhhcc
Q 006055 382 TFGTAYKAVLE-MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHG 458 (663)
Q Consensus 382 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~ 458 (663)
+||.||+|... +|+.+|+|++...... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 5899999998765332 57899999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---CCCCCCcccc
Q 006055 459 NKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---STPNRVAGYR 535 (663)
Q Consensus 459 ~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~y~ 535 (663)
.. .+++..+..++.++++++.|||+.+ ++|+||+|+||++++++.++++|||.+...... ....++..|+
T Consensus 81 ~~-----~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG-----RLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM 153 (244)
T ss_pred cc-----CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence 43 2789999999999999999999998 999999999999999999999999999877654 2234566799
Q ss_pred CccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHH
Q 006055 536 APEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQ 615 (663)
Q Consensus 536 aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 615 (663)
+||...+..++.++||||||+++++|++|..||.... +............. .. .........++.+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~ 219 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-----QLLELFKKIGKPKP-PF--------PPPEWKISPEAKD 219 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccCC-CC--------ccccccCCHHHHH
Confidence 9999988888999999999999999999999986531 11112211111110 00 0000003457888
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 006055 616 LAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 616 l~~~C~~~dP~~RPt~~ev~~ 636 (663)
++.+|+..+|++||++.++++
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHccCCchhccCHHHHhh
Confidence 999999999999999999987
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-31 Score=262.41 Aligned_cols=245 Identities=23% Similarity=0.308 Sum_probs=189.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC--------HHHHHHHHHHhhcCCCCCcccceEEEEec-CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS--------EREFKDKIEGVGAVNHENLVPLRAYYYSM-DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 444 (663)
.++||+|+|++||+|. +...+.||||+-.....+ .+...+|.++-+.+.||.||++++|+.-+ +..+-|+
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVL 547 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVL 547 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeee
Confidence 3579999999999998 667899999985433222 24567899999999999999999999755 4568899
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc---CCCceEEeccccccc
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT---KSYEARVSDFGLAHL 521 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~---~~~~~kl~Dfg~a~~ 521 (663)
||+++-+|+-+|...+ .+++..+..|+.||+.||.||.+..|||||-||||.|||+- ..|.+||.|||+++.
T Consensus 548 EYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 548 EYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 9999999999998644 58899999999999999999999999999999999999994 457899999999999
Q ss_pred cCCCCCC-----------CCCccccCccccCC----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHH
Q 006055 522 VGPSSTP-----------NRVAGYRAPEVTDP----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 522 ~~~~~~~-----------~~~~~y~aPE~~~~----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
+...... .+|..|++||.+.- ..++.|+||||.||++|..+.|+.||..... -+.+
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---------QQdI 693 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---------QQDI 693 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---------HHHH
Confidence 8664321 25666999998742 3578899999999999999999999975322 1223
Q ss_pred HhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 587 VKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
++.+-+...-... ++.-+....+...+|++|+.+.-++|....++..
T Consensus 694 LqeNTIlkAtEVq---FP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 694 LQENTILKATEVQ---FPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred Hhhhchhcceecc---CCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 3332222111111 1111122335566778999999999998888765
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-31 Score=259.57 Aligned_cols=230 Identities=23% Similarity=0.310 Sum_probs=181.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CH-HHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SE-REFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~-~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
..+||+|+||.|-+|.. .+.+.+|||++++... ++ +--+.|-++++.. +-|.++.++.+|...+.+|+||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 46899999999999984 4578899999987521 11 1233455566555 57899999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+|+|--.++... .+.+..+..+|.+||-||-+||++| ||+||||.+||++|.+|++||+|||+++.--...
T Consensus 434 GGDLMyhiQQ~G-----kFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 434 GGDLMYHIQQVG-----KFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred CchhhhHHHHhc-----ccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 999988887543 3677788889999999999999999 9999999999999999999999999998653332
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
+..+|+.|+|||++....|+..+|.|||||+||||+.|++||++..+ .+..+.+..... .
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE------~elF~aI~ehnv------------s 568 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE------DELFQAIMEHNV------------S 568 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHccC------------c
Confidence 23477889999999999999999999999999999999999976432 333444433321 1
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCC
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRP 629 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RP 629 (663)
.+...+.+...+...-+.+.|.+|.
T Consensus 569 yPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 569 YPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred CcccccHHHHHHHHHHhhcCCcccc
Confidence 2223344556666677888888884
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=7.1e-30 Score=283.45 Aligned_cols=252 Identities=19% Similarity=0.224 Sum_probs=161.2
Q ss_pred hcccccccceEEEEEEec-C----CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEE------EEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-M----GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAY------YYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~----g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~~~~~~~lv 443 (663)
.++||+|+||.||+|... + +..||||++......+.. ..+ .+....+.++..+... +....+.++|
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~-~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV 213 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIW-MNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLV 213 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHH-HHH--HHHhhchhhHHHHHHhhhcccccccCCceEEE
Confidence 478999999999999954 4 689999987643221111 111 1122222233222211 2345678999
Q ss_pred EEccCCCChhHhhccCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-
Q 006055 444 YDYLTMGSLSALLHGNKGA---------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK- 507 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~- 507 (663)
|||+.+++|.++++..... .........+..++.|++.||.|||+.+ |+||||||+|||+++
T Consensus 214 ~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP~NILl~~~ 291 (566)
T PLN03225 214 WRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKPQNIIFSEG 291 (566)
T ss_pred EEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCHHHEEEeCC
Confidence 9999999999998753210 0001123445679999999999999998 999999999999986
Q ss_pred CCceEEeccccccccCCC-----CCCCCCccccCccccCCC----------------------CCCCcchhhhHHHHHHH
Q 006055 508 SYEARVSDFGLAHLVGPS-----STPNRVAGYRAPEVTDPC----------------------KVSQKADVYSFGVLLLE 560 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~-----~~~~~~~~y~aPE~~~~~----------------------~~~~~~Dv~slGvvl~e 560 (663)
++.+||+|||+++..... ....++++|+|||.+... .++.++|||||||++||
T Consensus 292 ~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~e 371 (566)
T PLN03225 292 SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQ 371 (566)
T ss_pred CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHH
Confidence 578999999999865432 223456789999965321 23456799999999999
Q ss_pred HHhCCCCCcccc-------CCCCCChHHHHHHHHhhcccccccchhhhc-ccChHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006055 561 LLTGKAPTHALL-------NEEGVDLPRWVQSIVKDEWTSEVFDLELLR-YQNVEEEMVQLLQLAIDCSAQYPDNRPSMS 632 (663)
Q Consensus 561 lltg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ 632 (663)
|+++..|++... ...+.+...|....... ..++... ............+++.+|+..||++|||++
T Consensus 372 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 372 MAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 999877654310 01111222221111100 0000000 000011122345789999999999999999
Q ss_pred HHHHH
Q 006055 633 EVIKR 637 (663)
Q Consensus 633 ev~~~ 637 (663)
|+++|
T Consensus 446 e~L~H 450 (566)
T PLN03225 446 AALAH 450 (566)
T ss_pred HHhCC
Confidence 99995
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.7e-29 Score=273.40 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=172.7
Q ss_pred hcccccccceEEEEEEe-----------------cCCcEEEEEEecCcccC-HH--------------HHHHHHHHhhcC
Q 006055 375 AEVLGKGTFGTAYKAVL-----------------EMGTIVAVKRLKDVTIS-ER--------------EFKDKIEGVGAV 422 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~-~~--------------~~~~e~~~l~~l 422 (663)
.++||+|+||+||+|.. ..++.||||++...... .+ ....|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 47899999999999963 24568999998643221 12 233467777777
Q ss_pred CCCCc-----ccceEEEEe--------cCccEEEEEccCCCChhHhhccCCCC-------------------CCCCCCHH
Q 006055 423 NHENL-----VPLRAYYYS--------MDEKLLVYDYLTMGSLSALLHGNKGA-------------------GRTPLNWE 470 (663)
Q Consensus 423 ~h~ni-----v~l~~~~~~--------~~~~~lv~ey~~~gsL~~~l~~~~~~-------------------~~~~l~~~ 470 (663)
+|.++ ++++++|.. ....++||||+++|+|.++++...+. ....++|.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 77654 677787753 34679999999999999999753210 11235788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC-----CCCccccCccccCCCC-
Q 006055 471 MRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP-----NRVAGYRAPEVTDPCK- 544 (663)
Q Consensus 471 ~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~y~aPE~~~~~~- 544 (663)
.+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........ ..++.|+|||.+....
T Consensus 310 ~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~ 387 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQS 387 (507)
T ss_pred HHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCC
Confidence 89999999999999999998 999999999999999999999999999765433211 2356799999875322
Q ss_pred ---------------------CCCcchhhhHHHHHHHHHhCCC-CCccccCC------CCCChHHHHHHHHhhccccccc
Q 006055 545 ---------------------VSQKADVYSFGVLLLELLTGKA-PTHALLNE------EGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 545 ---------------------~~~~~Dv~slGvvl~elltg~~-p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
...+.||||+||++++|++|.. |+...... ...++..|.. . ....+
T Consensus 388 ~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~-----~~~~~ 461 (507)
T PLN03224 388 CPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-Y-----KGQKY 461 (507)
T ss_pred CCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-h-----cccCC
Confidence 1234799999999999999875 66432110 0111111111 0 00111
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYP---DNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP---~~RPt~~ev~~~ 637 (663)
+.. ..........+++.+++..+| .+|+|++|+++|
T Consensus 462 ~~~-----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 462 DFS-----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred Ccc-----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 111 111223456677778888765 689999999984
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-30 Score=264.04 Aligned_cols=240 Identities=20% Similarity=0.271 Sum_probs=195.7
Q ss_pred cccccccceEEEEEEecCCc-EEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGT-IVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~-~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
..||-|+||.|-++...+.. .+|+|.+++... ..+.+..|-.+|...+.|.||++|..|.+.+..|++||-|-+|
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG 505 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG 505 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence 46999999999998866443 489999886532 2356778999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP-- 528 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-- 528 (663)
.+...|+... .++..+...++..+.+|++|||.++ ||+|||||+|.++|.+|.+||.|||+|+..+.+..+
T Consensus 506 ElWTiLrdRg-----~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT 578 (732)
T KOG0614|consen 506 ELWTILRDRG-----SFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT 578 (732)
T ss_pred hhhhhhhhcC-----CcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence 9999998643 4788888889999999999999998 999999999999999999999999999998876543
Q ss_pred -CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 -NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 -~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.+|+.|.|||++..+..+..+|.||+|+++|||++|.+||.+. +.......+++.-. ....+.
T Consensus 579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~------dpmktYn~ILkGid----------~i~~Pr 642 (732)
T KOG0614|consen 579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV------DPMKTYNLILKGID----------KIEFPR 642 (732)
T ss_pred ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC------chHHHHHHHHhhhh----------hhhccc
Confidence 4788899999999999999999999999999999999999753 22223333332211 111223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKRI 638 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~L 638 (663)
...+...+++++....+|.+|.- +.++.+|-
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 34455677888888899999875 66776654
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=277.45 Aligned_cols=239 Identities=24% Similarity=0.351 Sum_probs=181.9
Q ss_pred hcccccccceE-EEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGT-AYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+++|.|+.|+ ||+|..+ |+.||||++-... .....+|+..++.- +|||||++++.-.++...|+..|.|.. +|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL 589 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SL 589 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hH
Confidence 35699999985 5999987 8999999975422 34567899988776 799999999888888889999999876 99
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---C--CceEEeccccccccCCCC-
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---S--YEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~--~~~kl~Dfg~a~~~~~~~- 526 (663)
.+++... +.......-...+.+..|++.||+|||+.+ |+||||||.||||+. + ..++|+|||+++.+....
T Consensus 590 ~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s 666 (903)
T KOG1027|consen 590 QDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS 666 (903)
T ss_pred HHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence 9999763 111111111334567889999999999987 999999999999976 3 469999999999876543
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhC-CCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 ------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTG-KAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
...||.||+|||++....-+..+||||+||++|+.++| .+||......+ .+++...+....+.
T Consensus 667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------~NIl~~~~~L~~L~-- 736 (903)
T KOG1027|consen 667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------ANILTGNYTLVHLE-- 736 (903)
T ss_pred hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--------hhhhcCccceeeec--
Confidence 23477889999999888878899999999999999995 99997644332 12333322211111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++ +..++|.+|+..+|..||++.+|+.|
T Consensus 737 -----~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 737 -----PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -----cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11112 56778889999999999999999764
No 391
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.5e-31 Score=246.89 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=188.0
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey 446 (663)
+.||-|+||.||.+. -++|+.||+|++.... .+.+.+.+|++++...+|.|+...++...-. ++.|+++|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 579999999999988 5689999999987653 3467889999999999999999988775432 356788888
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
|.. +|..++-. .++++-....-..+||++||.|||+.+ |.||||||.|.|++.+...||||||+|+......
T Consensus 139 mQS-DLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 139 MQS-DLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHh-hhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCceEEecccccccccchhh
Confidence 765 77777653 456888888889999999999999998 9999999999999999999999999999887665
Q ss_pred CCC-----CCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH---------HHHHHHhhcc
Q 006055 527 TPN-----RVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR---------WVQSIVKDEW 591 (663)
Q Consensus 527 ~~~-----~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~ 591 (663)
... .|..|.|||++++. .|+...||||.||++.|++.++..|......+..++.. -++...+...
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 433 34569999999885 58899999999999999999999887643221111100 0000000000
Q ss_pred ccccc-------chh-hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 592 TSEVF-------DLE-LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 592 ~~~~~-------d~~-~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
..++ +.. +.........-.+-..+.++++..||+.|.+.++.+.++-
T Consensus 291 -~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 291 -NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred -HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 0000 000 0000111122234456667889999999999999988763
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.1e-29 Score=259.75 Aligned_cols=193 Identities=25% Similarity=0.377 Sum_probs=164.4
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||-|+||+|+++. ..+...||.|.+.+... ....++.|.++|.....+-||+|+-.|.+.+.+|+||||+++|
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 469999999999998 55678899999876532 2356788999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC-------
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG------- 523 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~------- 523 (663)
++-.+|-... .+++..+..++.++..|+++.|..| +|||||||+|||||.+|++||.|||+++-..
T Consensus 715 DmMSLLIrmg-----IFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 715 DMMSLLIRMG-----IFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 9988876433 4788888888899999999999999 9999999999999999999999999985321
Q ss_pred --CC-----C--------------------------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhC
Q 006055 524 --PS-----S--------------------------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTG 564 (663)
Q Consensus 524 --~~-----~--------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg 564 (663)
.. + ...+|..|+|||++....++..+|.||.|||||||+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 00 0 01145569999999999999999999999999999999
Q ss_pred CCCCccccCCC
Q 006055 565 KAPTHALLNEE 575 (663)
Q Consensus 565 ~~p~~~~~~~~ 575 (663)
+.||......+
T Consensus 868 ~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 868 QPPFLADTPGE 878 (1034)
T ss_pred CCCccCCCCCc
Confidence 99998765433
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.1e-29 Score=231.67 Aligned_cols=249 Identities=16% Similarity=0.268 Sum_probs=187.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCcccceEEEEecC--ccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENLVPLRAYYYSMD--EKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~ey~~~g 450 (663)
.+++|+|.|++||.|. ..+.++++||.++... .+.+.+|+.++..++ ||||+++++...++. ...||+||+.+.
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccc
Confidence 5689999999999998 6778999999998643 578999999999997 999999999987764 467999999998
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccCCCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
+...+.. .++...+.....+++.||.|+|++| |+|||+||.|++||.. ...+|+|+|+|.++.+....+
T Consensus 121 Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn 190 (338)
T KOG0668|consen 121 DFKQLYP--------TLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 190 (338)
T ss_pred cHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHhhcCCCceee
Confidence 8877664 2666677888999999999999999 9999999999999965 469999999999998876544
Q ss_pred ---CCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc-------cccccch
Q 006055 530 ---RVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW-------TSEVFDL 598 (663)
Q Consensus 530 ---~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~ 598 (663)
.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||-...+.. ..++..+ .++.... ..-.+|+
T Consensus 191 VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIa-kVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIA-KVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHH-HHhChHHHHHHHHHHccCCCh
Confidence 3344889999865 457778899999999999999999985422111 0122211 1111000 0011222
Q ss_pred hhhc---------------ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLR---------------YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~---------------~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
++.. .....-...+.++++.+.+..|-++|||++|.+.|
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 2211 00001112456777779999999999999999875
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=238.34 Aligned_cols=237 Identities=18% Similarity=0.309 Sum_probs=182.7
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCH----HHHHHHHHHhhc-CCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISE----REFKDKIEGVGA-VNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~----~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
..+||+|+|+.|-.+. .++.+.+|+|++++....+ .-.+.|-.+... -+||.+|.+..+|......++|.||++
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ 334 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN 334 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence 3689999999999998 5678999999988653221 224445544444 479999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc-CCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV-GPSST 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~-~~~~~ 527 (663)
+|+|--+++.++ .++++.+..+...|+.||.|||+.| ||+||||..|||+|..|++|+.|+|+++.- .+.++
T Consensus 335 ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldaeghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 335 GGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred Ccceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence 999977776543 4888889899999999999999999 999999999999999999999999999764 33333
Q ss_pred ---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccC-CCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 528 ---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLN-EEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
..+|+.|+|||++.+..|+..+|.|++||+++||+.|+.||+...- ....+...++-+++.+..+..
T Consensus 408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri--------- 478 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI--------- 478 (593)
T ss_pred cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc---------
Confidence 3478889999999999999999999999999999999999985421 122333444444433322111
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCC
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRP 629 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RP 629 (663)
+.........+.+.-+.+||.+|.
T Consensus 479 --prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 479 --PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred --cceeehhhHHHHHHhhcCCcHHhc
Confidence 111222344555677788888874
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3.1e-27 Score=229.91 Aligned_cols=206 Identities=35% Similarity=0.509 Sum_probs=181.1
Q ss_pred cccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 378 LGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 378 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
||+|++|.||++... +++.+++|++..... ....+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999965 489999999886644 25779999999999999999999999998889999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCCC----CCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPSS----TPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~----~~~ 529 (663)
++.... ..+++..+..++.++++++.|||+.+ ++|+||+|.||+++. ++.++|+|||.+....... ...
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence 987532 35889999999999999999999998 999999999999999 8999999999998765542 233
Q ss_pred CCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
....|++||..... ..+.++|+|++|+++++|
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 55669999999877 788899999999999998
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
..+.+++..|+..+|++||++.++++++
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2577888899999999999999998753
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-28 Score=249.57 Aligned_cols=188 Identities=24% Similarity=0.334 Sum_probs=163.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCH---------HHHHHHHHHhhcCC---CCCcccceEEEEecCccE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISE---------REFKDKIEGVGAVN---HENLVPLRAYYYSMDEKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---------~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~ 441 (663)
.+.+|+|+||.|+.|.+ ++...|+||.+++.+.-. ..+-.||.+|+.++ |+||++++++|++++..|
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy 645 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY 645 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence 57899999999999994 457889999987653221 13557999999997 999999999999999999
Q ss_pred EEEEcc-CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 442 LVYDYL-TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 442 lv~ey~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
|+||-. ++.+|.+++...+ .+++.....|+.||+-|+++||+++ |+|||||-+||.++.+|-+||+|||.|.
T Consensus 646 l~te~hg~gIDLFd~IE~kp-----~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~g~~klidfgsaa 718 (772)
T KOG1152|consen 646 LETEVHGEGIDLFDFIEFKP-----RMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSNGFVKLIDFGSAA 718 (772)
T ss_pred EEecCCCCCcchhhhhhccC-----ccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecCCeEEEeeccchh
Confidence 999965 5669999997644 4899999999999999999999999 9999999999999999999999999997
Q ss_pred ccC--CCCCCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCc
Q 006055 521 LVG--PSSTPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTH 569 (663)
Q Consensus 521 ~~~--~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~ 569 (663)
... +-+...+|.+|.|||++.+..| +..-|||++|+++|-++....||+
T Consensus 719 ~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 719 YTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 654 4456779999999999999877 456799999999999999999985
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-26 Score=235.08 Aligned_cols=127 Identities=24% Similarity=0.293 Sum_probs=108.2
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-----C---CCcccceEEEEe----cCccE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-----H---ENLVPLRAYYYS----MDEKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~----~~~~~ 441 (663)
..+||.|-|++||++. ..+.+.||+|+.+....-.+....||+++++++ | ..||+|+++|.. +.+.+
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 4689999999999999 566889999999988776777889999998873 3 469999999864 46789
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT 506 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~ 506 (663)
+|+|++.. +|..++.... -+.++...+..|++||+.||.|||..+ .|||-||||+|||+.
T Consensus 163 MVfEvLGd-nLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~ec-gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 163 MVFEVLGD-NLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHREC-GIIHTDLKPENVLLC 222 (590)
T ss_pred EEehhhhh-HHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHhc-CccccCCCcceeeee
Confidence 99998854 8888887543 345899999999999999999999986 699999999999995
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=4.3e-28 Score=253.65 Aligned_cols=241 Identities=24% Similarity=0.356 Sum_probs=191.9
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
..+|.|+||.|||++ .+.++..|||.++-.. ..-+-.++|+-+++..+|+||+.++|.|...+..+++|||+.+|+|.
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ 100 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ 100 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence 679999999999999 6779999999998653 33466788999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC----CCCCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP----SSTPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 529 (663)
+..+... ++++.+...+++...+|++|||+++ -+|||||-.|||+++.|++|++|||.+..+.. .....
T Consensus 101 diy~~Tg-----plselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krksfi 173 (829)
T KOG0576|consen 101 DIYHVTG-----PLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFI 173 (829)
T ss_pred ceeeecc-----cchhHHHHHHHhhhhccchhhhcCC--cccccccccceeecccCceeecccCchhhhhhhhhhhhccc
Confidence 9988644 6888899999999999999999998 89999999999999999999999999865543 35567
Q ss_pred CCccccCcccc---CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVT---DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~---~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
||+.|||||+. ..+.|.+++|||+.|+...|+-.-+.|.-...... +-..+. ..-+++.-+++ .
T Consensus 174 GtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~LmT----kS~~qpp~lkD--k 240 (829)
T KOG0576|consen 174 GTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLMT----KSGFQPPTLKD--K 240 (829)
T ss_pred CCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHhh----ccCCCCCcccC--C
Confidence 99999999986 45678999999999999999988877743221110 000010 11112111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
......+-++++.|+.++|++||+++.+++
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 122334667778999999999999998765
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.3e-27 Score=243.03 Aligned_cols=257 Identities=24% Similarity=0.289 Sum_probs=194.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC------CCcccceEEEEecCccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH------ENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
...|+|-|++|.+|.. .-|..||||++...+.-.+.=..|+++|.+|.. -|+++++..|...+++|||||-+.
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls 517 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS 517 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh
Confidence 3578999999999983 448899999998876666667789999999852 478999999999999999999776
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPSST 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 527 (663)
. +|.++|..... ...+....+..++.|+..||..|...+ |+|.||||.|||+++.. .+||||||.|........
T Consensus 518 l-NLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei 592 (752)
T KOG0670|consen 518 L-NLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDFGSASFASENEI 592 (752)
T ss_pred c-hHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccCccccccccccc
Confidence 5 99999986542 345788889999999999999999998 99999999999999765 579999999988776554
Q ss_pred CCC--CccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHH-----HHHH-hhcccccccch-
Q 006055 528 PNR--VAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWV-----QSIV-KDEWTSEVFDL- 598 (663)
Q Consensus 528 ~~~--~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~d~- 598 (663)
+.. +.-|.|||++.|..|+...|+||.||+||||.||+..|.+..+..-..+.--+ ...+ +..+....||.
T Consensus 593 tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d 672 (752)
T KOG0670|consen 593 TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQD 672 (752)
T ss_pred cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccc
Confidence 332 33499999999999999999999999999999999998764332100000000 0000 11111111111
Q ss_pred -------------------------------hhhccc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 -------------------------------ELLRYQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 -------------------------------~~~~~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+...+ .......+|.+|+..|+..||++|.|..++++|
T Consensus 673 ~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 673 LNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 111111 112335667888899999999999999999875
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=229.05 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=181.7
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEEE
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVYD 445 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 445 (663)
..+|.|.- .|..|. .-.+++||+|++... ....+...+|...+..++|+|+++++.+|+-. .+.|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 45777777 555554 335899999987644 23356778899999999999999999998643 35689999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
||.. +|...++. .++-.....|..|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+.....
T Consensus 102 ~m~~-nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 102 LMDA-NLCQVILM-------ELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hhhh-HHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecchhheeeccchhhcccCcc
Confidence 9976 99888873 2666788899999999999999999 999999999999999999999999999876654
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHH------------------
Q 006055 526 ---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQ------------------ 584 (663)
Q Consensus 526 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~------------------ 584 (663)
.....+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.. .+.+|.+
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-----~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-----HIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-----HHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 12234556999999999889999999999999999999999886421 1222221
Q ss_pred ---HHHhhcccc-------cccchhhhcc-cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 585 ---SIVKDEWTS-------EVFDLELLRY-QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 585 ---~~~~~~~~~-------~~~d~~~~~~-~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+..... .+.|...... +...-......+++.+|+..+|++|.++++++.|
T Consensus 247 ~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 247 TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 111100000 0000000000 0011223456678889999999999999999985
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.2e-25 Score=221.84 Aligned_cols=190 Identities=33% Similarity=0.466 Sum_probs=166.5
Q ss_pred hcccccccceEEEEEEecC-CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEM-GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|++|.||++.... ++.+|+|.+..... ..+.+.+|++.++.++|+|++++++++......++++||+++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 3579999999999999654 89999999876543 36788999999999999999999999998899999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.+++..... .+++.....++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 84 L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 84 LFDYLRKKGG----KLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9999975431 1789999999999999999999998 9999999999999999999999999998776542
Q ss_pred CCCCCccccCcccc-CCCCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 527 TPNRVAGYRAPEVT-DPCKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 527 ~~~~~~~y~aPE~~-~~~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
...+...|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 23345569999998 666778899999999999999999999954
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-25 Score=211.82 Aligned_cols=255 Identities=21% Similarity=0.324 Sum_probs=183.3
Q ss_pred cCHHHHHHHhhcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEE-EEecCccE
Q 006055 365 FDLEDLLRASAEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAY-YYSMDEKL 441 (663)
Q Consensus 365 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 441 (663)
++++|. ..+.+.+|+|.||.+-+++++ +.+.+++|.+.......++|.+|..---.| .|.||+.-++. |...+..+
T Consensus 20 v~l~d~-y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 20 VDLEDV-YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred cchhhh-hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 444443 233567999999999999954 578999999988877888999998753334 68899987765 56667788
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CC-CceEEeccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KS-YEARVSDFGLA 519 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~-~~~kl~Dfg~a 519 (663)
+++||++-|+|.+-+... .+-+....+++.|++.|+.|+|++. ++|||||.+||||- .| ..+||||||..
T Consensus 99 F~qE~aP~gdL~snv~~~------GigE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA------GIGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EeeccCccchhhhhcCcc------cccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeecccc
Confidence 999999999999988653 3777888999999999999999998 99999999999993 33 37999999999
Q ss_pred cccCCCCC-CCCCccccCccccCCC-----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 520 HLVGPSST-PNRVAGYRAPEVTDPC-----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 520 ~~~~~~~~-~~~~~~y~aPE~~~~~-----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
+..+.... ...+..|.+||..... .....+|||.||++++.++||+.||+..... ......|.+-. .+...
T Consensus 171 ~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~-d~~Y~~~~~w~--~rk~~ 247 (378)
T KOG1345|consen 171 RKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM-DKPYWEWEQWL--KRKNP 247 (378)
T ss_pred cccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc-CchHHHHHHHh--cccCc
Confidence 87654322 2234559999986432 2456789999999999999999999854322 22333443221 11111
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.. | .........+.++.++-+..+|++|=...++.++.
T Consensus 248 ~~--P-----~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 248 AL--P-----KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred cC--c-----hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 10 0 01112233455666688889999995555555544
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=3.6e-25 Score=258.27 Aligned_cols=191 Identities=18% Similarity=0.203 Sum_probs=137.2
Q ss_pred cCCC-CCcccceEEE-------EecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCc
Q 006055 421 AVNH-ENLVPLRAYY-------YSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPN 492 (663)
Q Consensus 421 ~l~h-~niv~l~~~~-------~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~ 492 (663)
.++| +||++++++| ...+..+.++||+ .++|.++++.. ...+++..++.++.||++||.|||+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g-- 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQG-- 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhCC--
Confidence 4456 5788888877 2234567788887 45999999743 235899999999999999999999998
Q ss_pred ceecCCCCCCEEEcC-------------------CCceEEeccccccccCCCC--------------------CCCCCcc
Q 006055 493 VSHGNIKSSNILLTK-------------------SYEARVSDFGLAHLVGPSS--------------------TPNRVAG 533 (663)
Q Consensus 493 iiHrdlk~~Nill~~-------------------~~~~kl~Dfg~a~~~~~~~--------------------~~~~~~~ 533 (663)
|+||||||+||||+. ++.+|++|||+++...... ...+|..
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 4456677777765421100 0124556
Q ss_pred ccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHH
Q 006055 534 YRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQL 613 (663)
Q Consensus 534 y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 613 (663)
|||||++.+..++.++|||||||++|||++|..|+.... ..+...... ...+. ......+.
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~~-----~~~~~------~~~~~~~~ 241 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRHR-----VLPPQ------ILLNWPKE 241 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHHh-----hcChh------hhhcCHHH
Confidence 999999999999999999999999999999988864311 011111100 01110 01112245
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 006055 614 LQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 614 ~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..++.+|+..+|.+||++.|++++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 577889999999999999999875
No 404
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.92 E-value=6.9e-25 Score=262.79 Aligned_cols=205 Identities=31% Similarity=0.527 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHhhcccCCChHHHHHHHHHHHhcCC---CCcCCcCCCCCCCccceeEecC-CcEEEEEcCCCCcccc
Q 006055 9 SQNIFLLLLLIISTFSFSFSDLSSDRAALLALRSSVGG---RTLLWNVYEASPCKWAGVECEQ-NRVTMLRLPGVALSGQ 84 (663)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~d~~all~~~~~~~~---~~~~w~~~~~~~c~w~gv~c~~-~~v~~L~L~~~~l~g~ 84 (663)
..+.|+++++++.....+.. .+.|++||++||+++.. ...+|+. ..+||.|.||+|+. ++|+.|+|++|+++|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~ 84 (968)
T PLN00113 7 QHCPYLIFMLFFLFLNFSML-HAEELELLLSFKSSINDPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGK 84 (968)
T ss_pred CCCChHHHHHHHHHHHccCC-CHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCcccc
Confidence 33334333333333333333 56899999999999963 2347874 45799999999974 6899999999999888
Q ss_pred cCccccCCCCCCCEEEccCCCCCCCCCcccc-CCCCCceEEcccccccC----------------------chhhhhcCC
Q 006055 85 IPLGILGNLTSLRTLSLRFNSLTSQLPSDLA-SCSNLRNLYLQGNHFSG----------------------EVPLFLVGL 141 (663)
Q Consensus 85 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l 141 (663)
+|. .|..+++|+.|+|++|++++.+|..+. ++++|++|+|++|+++| .+|..++++
T Consensus 85 ~~~-~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l 163 (968)
T PLN00113 85 ISS-AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSF 163 (968)
T ss_pred CCh-HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcC
Confidence 875 568888888888888888877776654 66666666666666554 445555555
Q ss_pred ccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 142 HHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 142 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
++|+.|+|++|.+.+.+|..++++++|++|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+.+++.+
T Consensus 164 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 238 (968)
T PLN00113 164 SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSL 238 (968)
T ss_pred CCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCC
Confidence 666666666666655556666666666666666666665566666666666666666666666666555544443
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=3.1e-24 Score=203.83 Aligned_cols=168 Identities=26% Similarity=0.311 Sum_probs=127.7
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|+|.++++... ..++|..++.|+.|++.||.|||+.+ ||+||+++.++.+|+ ||+++...... ..
T Consensus 1 GsL~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~ 65 (176)
T smart00750 1 VSLADILEVRG----RPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SR 65 (176)
T ss_pred CcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCccceee--ccceEeecccc-CC
Confidence 68999997532 35899999999999999999999875 999999999999999 99998765533 35
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++|||||||++|||++|+.||..... ....+.............+ .......
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 135 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMPADDPRD-----RSNLESV 135 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhccCCccc-----cccHHHH
Confidence 67889999999999999999999999999999999999964321 1122222221111100000 0111222
Q ss_pred H--HHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 610 M--VQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 610 ~--~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
. .++.+++.+|+..+|++||++.|+++++..+.
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 2 26889999999999999999999999997764
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=1.5e-24 Score=217.51 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=186.2
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|.|++||++... .++.||+|.+... .....+..|++++..+ .+.||+++.+++...+...+|+||++.
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H 119 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEH 119 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCc
Confidence 578999999999999843 4788999988653 3356689999999988 589999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEecccccccc------
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLV------ 522 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~------ 522 (663)
....+++.. ++...+...+..+..||.|+|+.| ||||||||+|+|.+. .+.-.|.|||+|..+
T Consensus 120 ~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 120 DRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred cCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence 999999874 677888899999999999999999 999999999999975 456899999999611
Q ss_pred -----------CC-----------------C--------------CCCCCCccccCccccCCC-CCCCcchhhhHHHHHH
Q 006055 523 -----------GP-----------------S--------------STPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLL 559 (663)
Q Consensus 523 -----------~~-----------------~--------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~ 559 (663)
.+ . ....||+||.|||++... ..+.++||||.||+++
T Consensus 190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 00 0 001267789999998654 5688999999999999
Q ss_pred HHHhCCCCCccccCCCCCChHHHH--------HHH--Hhhc--ccc-----c---------ccc-hhh--------hccc
Q 006055 560 ELLTGKAPTHALLNEEGVDLPRWV--------QSI--VKDE--WTS-----E---------VFD-LEL--------LRYQ 604 (663)
Q Consensus 560 elltg~~p~~~~~~~~~~~~~~~~--------~~~--~~~~--~~~-----~---------~~d-~~~--------~~~~ 604 (663)
-+++++.||-...++-+. +...+ ++. ..+. ... . -++ ... ....
T Consensus 270 slls~~~PFf~a~dd~~a-l~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADA-LAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred hhhccccccccCccccch-HHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 999999998654332211 11110 000 0000 000 0 000 000 0001
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
..+.....++++..+|++.||.+|.|++|.++|-
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 1112233678889999999999999999999864
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=6.1e-25 Score=207.11 Aligned_cols=246 Identities=21% Similarity=0.355 Sum_probs=191.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
..+|.+...|+.|+|+++ |..+++|++...+.+ .++|..|.-.++-+.||||.+++|.|..+.+..++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 357889999999999998 566677887654322 3679999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCCCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNRV 531 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 531 (663)
|+.++|+.. ....+-.+..+.+.+||+|++|||+..|-|..--|.+..+++|++.+++|+ .+-+++..........
T Consensus 274 lynvlhe~t---~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr~y~ 349 (448)
T KOG0195|consen 274 LYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGRAYS 349 (448)
T ss_pred HHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccccccC
Confidence 999999765 345677889999999999999999998555555789999999999998874 2223333333344556
Q ss_pred ccccCccccCCCCC---CCcchhhhHHHHHHHHHhCCCCCccccCCC-CCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 532 AGYRAPEVTDPCKV---SQKADVYSFGVLLLELLTGKAPTHALLNEE-GVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 532 ~~y~aPE~~~~~~~---~~~~Dv~slGvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
+.||+||.++...- -..+|+|||.+++||+.|...||......+ +.++ ..++ ++...++
T Consensus 350 pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-------aleg----------lrv~ipp 412 (448)
T KOG0195|consen 350 PAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-------ALEG----------LRVHIPP 412 (448)
T ss_pred cccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-------hhcc----------ccccCCC
Confidence 77999999976542 346899999999999999999998765533 1111 0011 1122223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
.....+.+++.-|..+||.+||.+..++-.|+.+.
T Consensus 413 gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 34446677888999999999999999999998864
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.2e-21 Score=203.76 Aligned_cols=152 Identities=23% Similarity=0.257 Sum_probs=118.4
Q ss_pred hcccccccceEEEEEEec--CCcEEEEEEecCcc------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE--MGTIVAVKRLKDVT------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||+||+|... +++.||||++.... .....+.+|++++..++|+|+++.+.. ....++||||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~ 99 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGW 99 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEc
Confidence 467999999999999854 58889999875321 124568999999999999999863322 2468999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCC-CCCCEEEcCCCceEEeccccccccCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNI-KSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdl-k~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
+++++|... .. . . ...++.++++||.|||+.+ |+|||| ||+|||++.++.+||+|||+|+.....
T Consensus 100 ~~G~~L~~~-~~-~-------~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 100 TEGVPLHLA-RP-H-------G---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred cCCCCHHHh-Cc-c-------c---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 999999732 11 0 0 1356788999999999998 999999 999999999999999999999876543
Q ss_pred CC------------CCCCccccCccccCCC
Q 006055 526 ST------------PNRVAGYRAPEVTDPC 543 (663)
Q Consensus 526 ~~------------~~~~~~y~aPE~~~~~ 543 (663)
.. ..++..|+|||++...
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 21 1234559999998654
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=6.3e-21 Score=185.25 Aligned_cols=254 Identities=19% Similarity=0.196 Sum_probs=189.8
Q ss_pred hhcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCCC
Q 006055 374 SAEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 374 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+++||+|+||+.+.|+ +-+++.||||.= .......++..|.+..+.|. .+.|...+-|-.++.+..||+|.+ +-+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfE-PrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPS 109 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFE-PRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPS 109 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEec-cccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcC
Confidence 36899999999999999 678999999963 33334457788888888874 588888887777788889999966 559
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-----CceEEeccccccccCCCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-----YEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-----~~~kl~Dfg~a~~~~~~~ 526 (663)
|+|+..-+. ..++..++..||.|++.-++|+|++. +|.|||||+|+||..- ..+.|+|||+|+.+.+..
T Consensus 110 LEDLFD~Cg----R~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 110 LEDLFDLCG----RRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred HHHHHHHhc----CcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 988876443 35899999999999999999999998 9999999999999743 358999999999876543
Q ss_pred C-----------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 527 T-----------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 527 ~-----------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
+ ..+|..||+--...+++-+.+-|+-|+|-++++.+-|..||.+...... ..-.+.+ .+..-...
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn---K~kYeKI-Ge~Kr~T~ 259 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN---KEKYEKI-GETKRSTP 259 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch---HHHHHHh-ccccccCC
Confidence 3 3477889999999999999999999999999999999999998654321 1111111 11110000
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
+ + .-.+..+.++...+...-..+-++-|+.+-+..-+..+.+..
T Consensus 260 i--~----~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 260 I--E----VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred H--H----HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 0 0 011223445555555666777888899888777776664443
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=7.3e-20 Score=190.89 Aligned_cols=259 Identities=20% Similarity=0.185 Sum_probs=186.8
Q ss_pred hcccccccceEEEEEEecCC--cEEEEEEecCcc-cCHHHHHHHHHHhhcCCC----CCcccceEEE-EecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLEMG--TIVAVKRLKDVT-ISEREFKDKIEGVGAVNH----ENLVPLRAYY-YSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g--~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~lv~ey 446 (663)
..+||+|+||.||.+..... ..+|+|.-.... .....+..|+.++..+.. +++..+++.. ......++||+.
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l 102 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSL 102 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEec
Confidence 46899999999999995543 578888765542 212267788888888763 5788888888 466778999995
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-----CceEEecccccc-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-----YEARVSDFGLAH- 520 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-----~~~kl~Dfg~a~- 520 (663)
+ +.+|.++..... ...++..+..+|+.|++.+|.+||+.| ++||||||.|+.+... ..+.|.|||+++
T Consensus 103 ~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 103 L-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred c-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 5 669999886544 346899999999999999999999999 9999999999999865 459999999998
Q ss_pred -ccC-CC--------C---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHH
Q 006055 521 -LVG-PS--------S---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIV 587 (663)
Q Consensus 521 -~~~-~~--------~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 587 (663)
.+. .. . ...+|..|.++....+...+.+.|+||++.++.|+..|..||........ ..-+....
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~~ 253 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKDP 253 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHHh
Confidence 321 11 1 12267789999999999999999999999999999999999965432211 11111111
Q ss_pred hhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCC
Q 006055 588 KDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGL 652 (663)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~ 652 (663)
....... .....+.++.++...+-..+...+|....+...+++...........+
T Consensus 254 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~ 308 (322)
T KOG1164|consen 254 RKLLTDR----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSP 308 (322)
T ss_pred hhhcccc----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 1111000 001122345555556666899999999999999987755543333333
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=2e-19 Score=187.39 Aligned_cols=251 Identities=31% Similarity=0.398 Sum_probs=189.0
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCC-CcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHE-NLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||.|+||.||++... ..+++|.+..... ....+.+|+..+..+.|+ +++++.+++......+++++|+.++
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGG 83 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCC
Confidence 57899999999999976 8899999876532 256799999999999988 7999999997777789999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~---- 525 (663)
++.+++...... ..+.......+..+++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++.....
T Consensus 84 ~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 84 SLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred cHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 999777643211 25888999999999999999999998 99999999999999998 7999999999755433
Q ss_pred ------CCCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 526 ------STPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 526 ------~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
....++..|+|||.+.+ ..+....|+||+|++++++++|..||...... .........+...... ..
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~-~~ 235 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP-SL 235 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc-cc
Confidence 22346677999999987 57788999999999999999999997543321 0111111111111111 00
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... ...........+.+++..|+..+|..|.++.+....
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPL-SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccc-CccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000 000001223467788889999999999999988775
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.7e-21 Score=214.20 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=178.3
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEec----CcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLK----DVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~----~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+++|.|++|.|+... ....+..+.|.+. ..... ...+..|+.+-..++|+|++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 5689999999888776 3334445555433 11111 12256677778889999998877777666666666999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
++. +|..++.... .+....+.-++.|+..|+.|+|+.| |.|||+|++|++++.+|.+||+|||.+....-..
T Consensus 403 ~~~-Dlf~~~~~~~-----~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 403 CPY-DLFSLVMSNG-----KLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred ccH-HHHHHHhccc-----ccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 999 9999997542 3677788889999999999999999 9999999999999999999999999986543321
Q ss_pred C--------CCCCccccCccccCCCCCCCc-chhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 T--------PNRVAGYRAPEVTDPCKVSQK-ADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 ~--------~~~~~~y~aPE~~~~~~~~~~-~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
. ..+...|+|||.+.+..|... .||||.|++++.|++|+.||......+... ........ +.
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--------~~~~~~~~-~~ 545 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--------KTNNYSDQ-RN 545 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--------hhhccccc-cc
Confidence 1 224555999999999888665 799999999999999999998765443211 00000000 10
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.......-....+.+-..++.++++.+|.+|.|+++|++
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000011112334556678888999999999999999986
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=3.3e-20 Score=177.51 Aligned_cols=138 Identities=13% Similarity=0.142 Sum_probs=107.9
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccC---------------------------HHHHHHHHHHhhcCCCCCcc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---------------------------EREFKDKIEGVGAVNHENLV 428 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------------------~~~~~~e~~~l~~l~h~niv 428 (663)
..||+|+||.||+|...+|+.||||+++..... ......|++.+.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999878999999998654211 01223488999999888775
Q ss_pred cceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCcceecCCCCCCEEEcC
Q 006055 429 PLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYL-HAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 429 ~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~L-H~~~~~iiHrdlk~~Nill~~ 507 (663)
....+. ....++||||++++++...... ...+++.....++.|++.+|.|+ |+.+ |+||||||+||+++
T Consensus 83 ~p~~~~--~~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPIL--LKSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEE--ecCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEE-
Confidence 443332 2334899999999877654322 12478899999999999999999 6777 99999999999998
Q ss_pred CCceEEeccccccccC
Q 006055 508 SYEARVSDFGLAHLVG 523 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~ 523 (663)
++.++|+|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997553
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=5.7e-20 Score=171.11 Aligned_cols=191 Identities=23% Similarity=0.287 Sum_probs=155.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC-CCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH-ENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.++||.|+||.+|.|. ..+|+.||+|.=.. .....++..|..+.+.++| ..|..+..|..+.....+|||.. +-+|
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL 97 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL 97 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence 3689999999999999 78899999997433 3334467778888888876 56777788888888999999966 5699
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~--- 526 (663)
+++..-+. ..++..+.+-++-|++.-++|+|.++ .|||||||+|+|..-+. .+.++|||+|+.+.+..
T Consensus 98 EdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 98 EDLFNFCS----RRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred HHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence 99987654 35889999999999999999999998 99999999999997543 58999999998764432
Q ss_pred --------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccC
Q 006055 527 --------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLN 573 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~ 573 (663)
...+|..|.+--...+.+-+.+.|+-|+|.+++++--|..||++...
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 23366678776666666667788999999999999999999987643
No 415
>PLN03150 hypothetical protein; Provisional
Probab=99.82 E-value=7.1e-20 Score=205.99 Aligned_cols=132 Identities=34% Similarity=0.564 Sum_probs=87.0
Q ss_pred cCCChHHHHHHHHHHHhcCCCC-cCCcCCCCCCC-----ccceeEecCC------cEEEEEcCCCCcccccCccccCCCC
Q 006055 27 FSDLSSDRAALLALRSSVGGRT-LLWNVYEASPC-----KWAGVECEQN------RVTMLRLPGVALSGQIPLGILGNLT 94 (663)
Q Consensus 27 ~~~~~~d~~all~~~~~~~~~~-~~w~~~~~~~c-----~w~gv~c~~~------~v~~L~L~~~~l~g~~p~~~~~~l~ 94 (663)
.+..+.|.+||+++|++++... .+|+. +|| .|.||.|... .|+.|+|++|+++|.+|.. ++.|+
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~-i~~L~ 442 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLRFGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPND-ISKLR 442 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcccCCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHH-HhCCC
Confidence 3456789999999999997443 36852 456 6999999521 3666777777776666653 46666
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCC
Q 006055 95 SLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGF 162 (663)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 162 (663)
+|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+++|.+|..+
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 66666666666666666666666666666666666666666666666666666655555555555544
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-19 Score=192.07 Aligned_cols=215 Identities=25% Similarity=0.418 Sum_probs=163.9
Q ss_pred hhcCCCCCcccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCC
Q 006055 419 VGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNI 498 (663)
Q Consensus 419 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdl 498 (663)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ...++|.....+..+|+.||.|||... -..|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeee
Confidence 35688999999999999999999999999999999999763 356999999999999999999999874 2399999
Q ss_pred CCCCEEEcCCCceEEeccccccccCCCCCC------CCCccccCccccCCC-------CCCCcchhhhHHHHHHHHHhCC
Q 006055 499 KSSNILLTKSYEARVSDFGLAHLVGPSSTP------NRVAGYRAPEVTDPC-------KVSQKADVYSFGVLLLELLTGK 565 (663)
Q Consensus 499 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~------~~~~~y~aPE~~~~~-------~~~~~~Dv~slGvvl~elltg~ 565 (663)
+++|.++|..+.+||+|||+.......... ....-|.|||.+... ..+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998877531111 011229999998763 1467799999999999999999
Q ss_pred CCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 566 APTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 566 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.||+........ .+.+..+.. .....+.+...... +...++..++.+||..+|++||++++|-..++.+....
T Consensus 156 ~~~~~~~~~~~~--~eii~~~~~--~~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILRVKK--GGSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred CccccccccCCh--HHHHHHHHh--cCCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 999864433221 222222222 11111222221111 23336889999999999999999999999998886654
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.7e-19 Score=171.85 Aligned_cols=138 Identities=19% Similarity=0.205 Sum_probs=110.1
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccC---------------------------HHHHHHHHHHhhcCCCCCcc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---------------------------EREFKDKIEGVGAVNHENLV 428 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------------------~~~~~~e~~~l~~l~h~niv 428 (663)
..||+|+||.||+|...+|+.||||++...... ...+..|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999778999999998754210 11235788899999999886
Q ss_pred cceEEEEecCccEEEEEccCCCChhHh-hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEc
Q 006055 429 PLRAYYYSMDEKLLVYDYLTMGSLSAL-LHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLT 506 (663)
Q Consensus 429 ~l~~~~~~~~~~~lv~ey~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~ 506 (663)
....+... ..++||||++++++... +.. ..++......++.+++.++.++|+ .+ |+||||||+||+++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~ 152 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH 152 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE
Confidence 55544332 35899999998865433 332 236778889999999999999999 88 99999999999999
Q ss_pred CCCceEEeccccccccCC
Q 006055 507 KSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 507 ~~~~~kl~Dfg~a~~~~~ 524 (663)
++.++|+|||+++....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 88999999999987653
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=4.1e-19 Score=167.91 Aligned_cols=180 Identities=18% Similarity=0.115 Sum_probs=135.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHH-----HHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISER-----EFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~-----~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
...|++|+||+||.+.- .+.+++.+.+.......+ .+.+|+++++++. |+++.+++++ ...+++|||+.
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 35799999999997766 588888888876543222 5889999999995 4788888886 45799999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCC-CCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNI-KSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdl-k~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
+.+|...+.. ....++.+++++|.++|+.| |+|||| ||+|||++.++.++|+|||+|....+...
T Consensus 82 G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 82 GAAMYQRPPR------------GDLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred CccHHhhhhh------------hhHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 9998754321 01346778999999999999 999999 79999999999999999999986554331
Q ss_pred C-----------------CCCccccCccccCCC-CCC-CcchhhhHHHHHHHHHhCCCCCccccC
Q 006055 528 P-----------------NRVAGYRAPEVTDPC-KVS-QKADVYSFGVLLLELLTGKAPTHALLN 573 (663)
Q Consensus 528 ~-----------------~~~~~y~aPE~~~~~-~~~-~~~Dv~slGvvl~elltg~~p~~~~~~ 573 (663)
. ..++.|++|+...-- ..+ ...+.++-|.-+|.++|+..+.....+
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 1 023345555543211 112 345888999999999999998765443
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=9.3e-20 Score=176.24 Aligned_cols=163 Identities=15% Similarity=0.166 Sum_probs=126.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCH-HH---------HHHHHHHhhcCCCCCcccceEEEEec-------
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISE-RE---------FKDKIEGVGAVNHENLVPLRAYYYSM------- 437 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~~---------~~~e~~~l~~l~h~niv~l~~~~~~~------- 437 (663)
.+++|.|+||.||.+.. ++..+|||.+....... +. +.+|+..+.+++|++|..+..++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 57899999999999766 57789999997543222 22 68899999999999999999886643
Q ss_pred -CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecc
Q 006055 438 -DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDF 516 (663)
Q Consensus 438 -~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Df 516 (663)
...++||||+++.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+||++++++ ++++||
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCCC-EEEEEC
Confidence 24789999999999988732 222 23558899999999998 99999999999999988 999999
Q ss_pred ccccccCCCCCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHH
Q 006055 517 GLAHLVGPSSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELL 562 (663)
Q Consensus 517 g~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ell 562 (663)
|........... ..+.....+..++|+|+||+.+....
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 988655322111 11333344567899999999876554
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-19 Score=178.36 Aligned_cols=191 Identities=22% Similarity=0.237 Sum_probs=134.3
Q ss_pred CCCCcccceEEEEe---------------------------cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHH
Q 006055 423 NHENLVPLRAYYYS---------------------------MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLI 475 (663)
Q Consensus 423 ~h~niv~l~~~~~~---------------------------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 475 (663)
+|||||++.++|.+ +...|+||.-++. +|..++..+. .+...+.-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~------~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH------RSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC------CchHHHHHH
Confidence 69999999888743 1235789987766 8999997543 566777778
Q ss_pred HHHHHHHHHHHhhcCCcceecCCCCCCEEE--cCCCc--eEEeccccccccCCC------C----CCCCCccccCccccC
Q 006055 476 ALGAARGIEYLHAQGPNVSHGNIKSSNILL--TKSYE--ARVSDFGLAHLVGPS------S----TPNRVAGYRAPEVTD 541 (663)
Q Consensus 476 ~~~ia~al~~LH~~~~~iiHrdlk~~Nill--~~~~~--~kl~Dfg~a~~~~~~------~----~~~~~~~y~aPE~~~ 541 (663)
+.|+++|+.|||++| |.|||+|++|||+ |+|+. ..|+|||.+--.... . ...+....||||+..
T Consensus 347 laQlLEav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 899999999999999 9999999999998 44443 688999987322211 1 112334489999986
Q ss_pred CCC------CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHH
Q 006055 542 PCK------VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQ 615 (663)
Q Consensus 542 ~~~------~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 615 (663)
... .-.|+|.|+.|-+.||+++...||+...+.. .+... +.+.+ + ..-++..+..+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r~----Yqe~q---------L--Palp~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTRT----YQESQ---------L--PALPSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echhh----hhhhh---------C--CCCcccCChHHHH
Confidence 532 2358999999999999999999998632210 11111 10010 0 1112233446778
Q ss_pred HHHHccCCCCCCCCCHHHHHHHH
Q 006055 616 LAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 616 l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
++...++.||.+|++..-....|
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHH
Confidence 88899999999999987665554
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=5.1e-20 Score=203.16 Aligned_cols=239 Identities=26% Similarity=0.319 Sum_probs=173.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCc--ccCHHHHHHHHHH--hhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDV--TISEREFKDKIEG--VGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||.+.|=.|.+|+.+.|. |+||++-+. ..+-+.|.++++- ...++|||.+++.-.-......|||=+|..+
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh- 105 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH- 105 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-
Confidence 467999999999999998888 889988543 3344444444433 4556999999987776666777888888877
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc-CCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV-GPSS--- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~-~~~~--- 526 (663)
+|+|.+...+ -+...+...|+.|++.||.-+|..| |+|||||.+||||+.-.-+.|+||..-+.. -+.+
T Consensus 106 nLyDRlSTRP-----FL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 106 NLYDRLSTRP-----FLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred hhhhhhccch-----HHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 9999987533 4677888899999999999999999 999999999999999999999999765421 1111
Q ss_pred -------CCCCCccccCccccCCCC-----------CCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHH
Q 006055 527 -------TPNRVAGYRAPEVTDPCK-----------VSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIV 587 (663)
Q Consensus 527 -------~~~~~~~y~aPE~~~~~~-----------~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 587 (663)
+..+..+|+|||.+.... .+.+-||||+||++.||++ |++||.-. +.+
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-------------QL~ 245 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-------------QLL 245 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-------------HHH
Confidence 122334599999875421 4567899999999999998 78888531 111
Q ss_pred hhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 588 KDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 588 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
...... ..+++..-. .+++ ..+.+++..|++.||++|.++++.++.-.
T Consensus 246 aYr~~~-~~~~e~~Le-~Ied--~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 246 AYRSGN-ADDPEQLLE-KIED--VSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred hHhccC-ccCHHHHHH-hCcC--ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 111100 122211100 0000 15778899999999999999999998743
No 422
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.7e-20 Score=196.30 Aligned_cols=224 Identities=27% Similarity=0.342 Sum_probs=174.4
Q ss_pred ccccccceEEEEEE----ecCCcEEEEEEecCccc--C-HHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccC
Q 006055 377 VLGKGTFGTAYKAV----LEMGTIVAVKRLKDVTI--S-EREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~----~~~g~~vavK~l~~~~~--~-~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
++|+|+||.|+.+. ...|..+|.|.+++... . ......|..++...+ ||.++++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999765 34578899998875421 1 124556777788886 9999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+|+|...+.... .+++.........++-|++++|+.+ |+|||+|++||+++.+|++++.|||+.+..-.....
T Consensus 81 gg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 999998886433 4666667777778999999999998 999999999999999999999999999887666555
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|||||++. .....+|.||||++++||+||..||.. +.+..+++.. ...+.+
T Consensus 154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il~~~------------~~~p~~ 209 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMKRILKAE------------LEMPRE 209 (612)
T ss_pred ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHHHHhhhc------------cCCchh
Confidence 6788899999998 457789999999999999999999965 2233333321 122333
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSM 631 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~ 631 (663)
......+++..+...+|..|--.
T Consensus 210 l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 210 LSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhHHHHHHHHHHHhhCHHHHhcc
Confidence 34445555666777777777544
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.76 E-value=9.7e-19 Score=174.24 Aligned_cols=228 Identities=19% Similarity=0.284 Sum_probs=145.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCC----------CCcccceEEEE----
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNH----------ENLVPLRAYYY---- 435 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~---- 435 (663)
.+.||.|+++.||.+.. .+|+.+|||.+.... ..-+++++|.-....+.+ -.++--++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 46899999999999995 569999999875332 123566666655555332 12222222221
Q ss_pred -----ecC--------ccEEEEEccCCCChhHhhcc---CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCC
Q 006055 436 -----SMD--------EKLLVYDYLTMGSLSALLHG---NKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIK 499 (663)
Q Consensus 436 -----~~~--------~~~lv~ey~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk 499 (663)
... ..+++|+-+. ++|.+++.. .... ...+....+..+..|+.+.+++||+.| ++|+|||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHSYG--LVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEST-S
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhhcc--eEecccc
Confidence 111 2356788664 488877542 1111 223556777888899999999999999 9999999
Q ss_pred CCCEEEcCCCceEEeccccccccCCCCC-CCCCccccCccccCC--------CCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 500 SSNILLTKSYEARVSDFGLAHLVGPSST-PNRVAGYRAPEVTDP--------CKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 500 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~y~aPE~~~~--------~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
|+|++++.+|.++|+||+.....+.... ...+.+|.+||.... -.++.+.|.|++|+++|.|.++..||+.
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999998876665433 334466899997633 2467889999999999999999999976
Q ss_pred ccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCC
Q 006055 571 LLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNR 628 (663)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R 628 (663)
......... .+....+.+..+..++...++.+|++|
T Consensus 253 ~~~~~~~~~----------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 253 SSPEADPEW----------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CGGGSTSGG----------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCccccccc----------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 433221100 111222556677888889999999987
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=9.1e-18 Score=162.07 Aligned_cols=133 Identities=13% Similarity=0.093 Sum_probs=102.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCc-ccCHHHHHHHHHHhhcC-----CCCCcccceEEEEecC---ccE-EEE
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDV-TISEREFKDKIEGVGAV-----NHENLVPLRAYYYSMD---EKL-LVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~-lv~ 444 (663)
.++||+|+||.||. ...++.. +||++... ....+.+.+|+.++..+ .||||++++|++.++. ..+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 36899999999996 3334444 78987654 23456799999999999 5799999999998864 223 789
Q ss_pred Ec--cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCcceecCCCCCCEEEcC----CCceEEeccc
Q 006055 445 DY--LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGI-EYLHAQGPNVSHGNIKSSNILLTK----SYEARVSDFG 517 (663)
Q Consensus 445 ey--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al-~~LH~~~~~iiHrdlk~~Nill~~----~~~~kl~Dfg 517 (663)
|| +.+|+|.+++... .+++. ..++.+++.++ +|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 85 e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred cCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 99 5589999999642 14444 34567777777 9999998 999999999999974 3379999954
Q ss_pred cc
Q 006055 518 LA 519 (663)
Q Consensus 518 ~a 519 (663)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.9e-17 Score=187.05 Aligned_cols=184 Identities=22% Similarity=0.290 Sum_probs=146.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC---CCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN---HENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
...||+|+||+||+|...+|+.||+|.=+....++ |.--.+++.+|+ -+-|+.+...+.-.+.-+||+||.+.|+
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gt 780 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE--FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGT 780 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCcee--eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccccc
Confidence 45799999999999998779999999866544332 222233444444 2345555555666788899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-------CCCceEEeccccccccCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-------KSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-------~~~~~kl~Dfg~a~~~~~ 524 (663)
|.+++... ..++|.....+..++++.+++||..+ |||+||||+|++|. +...++|+|||.+..+..
T Consensus 781 lld~~N~~-----~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 781 LLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred HHHhhccC-----CCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 99999843 35899999999999999999999998 99999999999995 233589999999976643
Q ss_pred CC---C---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCC
Q 006055 525 SS---T---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAP 567 (663)
Q Consensus 525 ~~---~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p 567 (663)
.. . ...|-++-.+|...|+.++..+|.|.+.-+++.|+.|+.-
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 21 1 1245568899999999999999999999999999999764
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=1.1e-16 Score=156.71 Aligned_cols=133 Identities=18% Similarity=0.324 Sum_probs=113.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc---------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
+.||+|++|.||+|.. +|..|+||....... ....+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 578899998654321 123577899999999999998888888888889999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+++++|.+++.... + .+..++.+++.+|.++|+.+ ++|||++|.||+++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~--------~-~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG--------M-EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc--------H-HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986421 2 78889999999999999998 99999999999999 78999999999865
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=1.2e-16 Score=158.17 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=107.0
Q ss_pred hcccccccceEEEEEE--ecCCcEEEEEEecCccc--------------------C-----HHHHHHHHHHhhcCCCCCc
Q 006055 375 AEVLGKGTFGTAYKAV--LEMGTIVAVKRLKDVTI--------------------S-----EREFKDKIEGVGAVNHENL 427 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~--~~~g~~vavK~l~~~~~--------------------~-----~~~~~~e~~~l~~l~h~ni 427 (663)
.+.||+|+||.||+|. ..+|+.||+|.++.... . ...+..|++.+.++.+..
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~- 111 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG- 111 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 5689999999999998 57899999999864321 0 123567999999987533
Q ss_pred ccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC
Q 006055 428 VPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 428 v~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~ 507 (663)
+.+...+.. ...++||||+++++|....... ..........++.+++.++.+||+.+ .|+||||||+||+++
T Consensus 112 i~~p~~~~~-~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NIli~- 183 (237)
T smart00090 112 VPVPKPIAW-RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNILVH- 183 (237)
T ss_pred CCCCeeeEe-cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhEEEE-
Confidence 222222222 3468999999998887654321 12455566789999999999999986 599999999999999
Q ss_pred CCceEEeccccccccCC
Q 006055 508 SYEARVSDFGLAHLVGP 524 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~ 524 (663)
++.++|+|||.+.....
T Consensus 184 ~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 184 DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCEEEEEChhhhccCC
Confidence 88999999999876543
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.6e-16 Score=152.55 Aligned_cols=130 Identities=18% Similarity=0.301 Sum_probs=108.0
Q ss_pred ccccccceEEEEEEecCCcEEEEEEecCcc--cC-------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 377 VLGKGTFGTAYKAVLEMGTIVAVKRLKDVT--IS-------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.||+|+||.||+|.+ +|..|++|...... .. ...+.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 47889999865321 11 245678999999999988777666677777889999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
++++|.+++.... . .++.+++.+|.+||+.+ ++|||++|.||+++ ++.+++.|||.++..
T Consensus 80 ~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH------H------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875321 0 78899999999999998 99999999999999 789999999998653
No 429
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=1.3e-18 Score=153.98 Aligned_cols=156 Identities=29% Similarity=0.415 Sum_probs=140.2
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.++++.|.|++|+++ .+|+++ ..|.+|+.|++++|+|+. +|.+++.+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 32 ~s~ITrLtLSHNKl~-~vppni-a~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNI-AELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcH-HHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 468999999999999 888864 899999999999999986 8999999999999999999998 899999999999999
Q ss_pred ccccccccc-cCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC---CCCccCCcC
Q 006055 148 NLATNNFSG-EIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG---SNSFLGNSL 223 (663)
Q Consensus 148 ~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~---~~~~~~~~l 223 (663)
||.+|+++. .+|..|..++.|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.+. .+...+|.+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 999999974 68999999999999999999999 88888999999999999999998 7898877654 455677877
Q ss_pred CCCCCC
Q 006055 224 CGKPLQ 229 (663)
Q Consensus 224 ~~~p~~ 229 (663)
.-.|..
T Consensus 186 ~vlppe 191 (264)
T KOG0617|consen 186 TVLPPE 191 (264)
T ss_pred eecChh
Confidence 665543
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.9e-16 Score=152.01 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=104.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc-----------------------CHHHHHHHHHHhhcCCCCC--ccc
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI-----------------------SEREFKDKIEGVGAVNHEN--LVP 429 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----------------------~~~~~~~e~~~l~~l~h~n--iv~ 429 (663)
.+.||+|+||.||++..++|+.||||++..... ....+..|+..+..+.|++ +..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 478999999999999988899999998654221 1123567888888887774 334
Q ss_pred ceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC
Q 006055 430 LRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 430 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~ 509 (663)
.++ ....++||||+++++|...... .....++.+++.++.++|+.+ |+||||||+||++++++
T Consensus 100 ~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 100 PID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDDDE 162 (198)
T ss_pred eee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcCCC
Confidence 433 2456899999999999775431 224568889999999999998 99999999999999999
Q ss_pred ceEEeccccccccC
Q 006055 510 EARVSDFGLAHLVG 523 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~ 523 (663)
.++|+|||.+....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999996544
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=3.4e-16 Score=174.43 Aligned_cols=131 Identities=18% Similarity=0.277 Sum_probs=108.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEE-ecCc-c-------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKR-LKDV-T-------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~-~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||+||++.+.... +++|+ +... . .....+.+|++++..++|++++....++......++|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 478999999999999876443 44443 2221 1 112457899999999999999988888888788899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
|+++++|.+++. ....++.+++++|.|||+.+ ++||||||+||++ +++.++|+|||+++..
T Consensus 417 ~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 417 YIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred ecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999885 34678899999999999998 9999999999999 6789999999999764
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=2.5e-15 Score=144.07 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHH---H----------------------HHHHHHHhhcCCCCC--cc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISER---E----------------------FKDKIEGVGAVNHEN--LV 428 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~---~----------------------~~~e~~~l~~l~h~n--iv 428 (663)
+.||+|+||+||+|...+|+.||||.+........ . ...|.+.+..+.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 57999999999999987899999998865422111 1 124445555553332 33
Q ss_pred cceEEEEecCccEEEEEccCCCChhH-hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEc
Q 006055 429 PLRAYYYSMDEKLLVYDYLTMGSLSA-LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLT 506 (663)
Q Consensus 429 ~l~~~~~~~~~~~lv~ey~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~ 506 (663)
+.+++ ...++||||++++.+.. .+.... .. .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~ 149 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD 149 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE
Confidence 33332 35689999999965432 121110 11 5567889999999999999 77 99999999999999
Q ss_pred CCCceEEeccccccccCC
Q 006055 507 KSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 507 ~~~~~kl~Dfg~a~~~~~ 524 (663)
++.++++|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 89999999999975543
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.59 E-value=7.3e-16 Score=160.04 Aligned_cols=118 Identities=24% Similarity=0.357 Sum_probs=102.1
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccc
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGL 518 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~ 518 (663)
..++.|+++...+|.+|+...+. ....++...+.++.|++.|++| ++ .+|||+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccchhhhhhhhhh
Confidence 46899999999999999975432 3446888899999999999999 65 89999999999999999999999999
Q ss_pred ccccCCCC----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh
Q 006055 519 AHLVGPSS----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT 563 (663)
Q Consensus 519 a~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt 563 (663)
........ ...+|..||+||.+.+..|+.|+||||||++++|++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 97765443 1235666999999999999999999999999999997
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=4.3e-15 Score=136.66 Aligned_cols=133 Identities=16% Similarity=0.089 Sum_probs=111.6
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC--CCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH--ENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++.+++.+....+..+++|||++++.+.
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 569999999999999764 7899999866543 5678999999999977 48888888887777899999999887665
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-CcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-PNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
.+ +......++.++++++.++|... ..++|+|++|.||++++.+.+++.|||.++..
T Consensus 82 ~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 82 EV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 43 44566778899999999999853 34999999999999999899999999998643
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=7e-16 Score=170.91 Aligned_cols=197 Identities=25% Similarity=0.394 Sum_probs=131.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.|..|+||.||.+.++ +.+.+|.|+ .+... ++ +||..+.+ ..+.| |+-.
T Consensus 88 IklisngAygavylvrh~~trqrfa~ki-Nkq~l----------il-----Rnilt~a~------npfvv------gDc~ 139 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL----------IL-----RNILTFAG------NPFVV------GDCA 139 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcc-cccch----------hh-----hccccccC------Cccee------chhh
Confidence 478999999999999854 467888843 22110 11 11222221 22222 4444
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-------- 525 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-------- 525 (663)
..+..-. +++..+ +.+++|||+.+ |+|||+||+|.+|+.-|++|+.|||+.+.-...
T Consensus 140 tllk~~g-----~lPvdm--------vla~Eylh~yg--ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 140 TLLKNIG-----PLPVDM--------VLAVEYLHSYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred hhcccCC-----CCcchh--------hHHhHhhccCC--eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 4444211 233333 67899999998 999999999999999999999999998642111
Q ss_pred -----------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc--cc
Q 006055 526 -----------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE--WT 592 (663)
Q Consensus 526 -----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 592 (663)
....+|+.|+|||++....|+..+|+|++|+++||.+.|+.||.+...++ .+...+.+. |.
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~wp 278 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIEWP 278 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhcccc
Confidence 11236778999999999999999999999999999999999997653322 222222221 11
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSM 631 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~ 631 (663)
++ .+....+..+++.+.++.+|..|--.
T Consensus 279 E~-----------dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 279 EE-----------DEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred cc-----------CcCCCHHHHHHHHHHHHhChHhhccc
Confidence 11 12223456667778889999998533
No 436
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.58 E-value=2.5e-16 Score=163.58 Aligned_cols=153 Identities=25% Similarity=0.277 Sum_probs=128.3
Q ss_pred eeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCc
Q 006055 63 GVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLH 142 (663)
Q Consensus 63 gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 142 (663)
|+.-....++.|+|+.|+++ .+..+.+-+|+.|+.|+||+|.|+..-++.+..+++|++|+|++|+|+...+..|..|.
T Consensus 263 G~Fy~l~kme~l~L~~N~l~-~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~ 341 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQ-AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLS 341 (873)
T ss_pred cceeeecccceeecccchhh-hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHH
Confidence 44433467999999999999 78888889999999999999999999999999999999999999999988888899999
Q ss_pred cccccccccccccccCCCCCcccccccccccccccccCcCCC---CCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 143 HLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPG---FDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 143 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~---~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
.|+.|+|++|+++..--..|..+++|+.|||++|.|++.+.+ .|..|++|+.|+|.+|+|....-.+|..+..+
T Consensus 342 ~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~L 418 (873)
T KOG4194|consen 342 QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEAL 418 (873)
T ss_pred HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCccc
Confidence 999999999999866666788889999999999999887765 47778888888888888884333556555544
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=2.2e-14 Score=142.28 Aligned_cols=138 Identities=20% Similarity=0.187 Sum_probs=107.1
Q ss_pred Hhhcccc-cccceEEEEEEecCCcEEEEEEecCcc--------------cCHHHHHHHHHHhhcCCCCCc--ccceEEEE
Q 006055 373 ASAEVLG-KGTFGTAYKAVLEMGTIVAVKRLKDVT--------------ISEREFKDKIEGVGAVNHENL--VPLRAYYY 435 (663)
Q Consensus 373 ~~~~~lg-~G~~g~Vy~~~~~~g~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~ 435 (663)
.....|| .|+.|+||.+... +..++||++.... .....+.+|++++..++|+++ ++.+++..
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred hcCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 3456898 8999999999876 7789999875311 123467889999999998875 56676644
Q ss_pred ecCc----cEEEEEccCC-CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc
Q 006055 436 SMDE----KLLVYDYLTM-GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE 510 (663)
Q Consensus 436 ~~~~----~~lv~ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~ 510 (663)
.... .++||||+++ .+|.+++... .++.. .+.+++.++.+||+.| |+||||||.|||++.++.
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDAG--VYHADLNAHNILLDPDGK 180 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcCCCC
Confidence 3322 2599999997 6899888642 23433 3567899999999999 999999999999999999
Q ss_pred eEEeccccccccC
Q 006055 511 ARVSDFGLAHLVG 523 (663)
Q Consensus 511 ~kl~Dfg~a~~~~ 523 (663)
++|+|||.++...
T Consensus 181 v~LIDfg~~~~~~ 193 (239)
T PRK01723 181 FWLIDFDRGELRT 193 (239)
T ss_pred EEEEECCCcccCC
Confidence 9999999987643
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.56 E-value=7.6e-17 Score=142.84 Aligned_cols=141 Identities=27% Similarity=0.424 Sum_probs=130.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc-CchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS-GEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L 147 (663)
.+++.|++.+|++. .+|.+ ++.++.|+.|+++-|++. .+|..|+.++.|+.|||+.|+++ ..+|..|..++.|+.|
T Consensus 56 ~nlevln~~nnqie-~lp~~-issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIE-ELPTS-ISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhcccchhh-hcChh-hhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 47889999999999 89985 699999999999999997 48999999999999999999987 4589999999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGS 215 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~ 215 (663)
+|+.|.+. .+|+.+++|++|+.|.+.+|.+- .+|..++.+..|+.|.+.+|+++ .+|+.++++..
T Consensus 133 yl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l 197 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDL 197 (264)
T ss_pred HhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhh
Confidence 99999998 89999999999999999999998 89999999999999999999999 77877776543
No 439
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.56 E-value=1.1e-15 Score=152.33 Aligned_cols=147 Identities=29% Similarity=0.397 Sum_probs=125.7
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc-ccccCchh-------------
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG-NHFSGEVP------------- 135 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p------------- 135 (663)
..+.|+|..|+|+ .||+++|+.+++|+.||||+|+|+.+-|..|.+|.+|..|-+.+ |+|+. +|
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~-l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD-LPKGAFGGLSSLQRL 145 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh-hhhhHhhhHHHHHHH
Confidence 5788999999999 99999999999999999999999999999999998887776666 76652 21
Q ss_pred --------------------------------------------------------------------------------
Q 006055 136 -------------------------------------------------------------------------------- 135 (663)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (663)
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence
Q ss_pred ------------------------------------------hhhcCCccccccccccccccccCCCCCccccccccccc
Q 006055 136 ------------------------------------------LFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFL 173 (663)
Q Consensus 136 ------------------------------------------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 173 (663)
..|..|++|+.|+|++|+|++.-+.+|..+..|++|.|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 12557888999999999999888889999999999999
Q ss_pred ccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 174 ENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
..|+|...-...|.++..|++|+|.+|+|+...|.+|..+..++-
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~ 350 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLST 350 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeee
Confidence 999998666678889999999999999999888988877665543
No 440
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.51 E-value=1.6e-15 Score=158.50 Aligned_cols=159 Identities=25% Similarity=0.341 Sum_probs=94.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|||++|+|+ ..|.+ +.+-.++-.|+||+|+|..+..+-|-+|+.|-.||||+|++. .+|+.+..|.+|++|+
T Consensus 103 ~dLt~lDLShNqL~-EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhh-hcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhh
Confidence 35666777777766 66653 456666666666666665532234456666666666666666 4555556666666666
Q ss_pred ccccccc-------------------------ccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 149 LATNNFS-------------------------GEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 149 l~~N~l~-------------------------~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
|++|.+. ..+|.++..|.+|..+|||.|.|. .+|+.+..+++|+.|+||+|+|+
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT 258 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee
Confidence 6666542 235666667777777777777776 66776667777777777777666
Q ss_pred CCC--CcccccCCCCCccCCcCCCCCCCCC
Q 006055 204 GSI--PKRFQTFGSNSFLGNSLCGKPLQDC 231 (663)
Q Consensus 204 g~~--p~~~~~~~~~~~~~~~l~~~p~~~c 231 (663)
..- -..+.++..+..+.|.|...|...|
T Consensus 259 eL~~~~~~W~~lEtLNlSrNQLt~LP~avc 288 (1255)
T KOG0444|consen 259 ELNMTEGEWENLETLNLSRNQLTVLPDAVC 288 (1255)
T ss_pred eeeccHHHHhhhhhhccccchhccchHHHh
Confidence 211 1223444455555555554444333
No 441
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.49 E-value=2.2e-15 Score=157.40 Aligned_cols=144 Identities=29% Similarity=0.395 Sum_probs=91.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc-----------------
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS----------------- 131 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~----------------- 131 (663)
.+...|+|++|+|. +||...|-+|+.|-.||||+|++.. +|+.+.+|.+|++|+|++|-+.
T Consensus 126 Kn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLh 203 (1255)
T KOG0444|consen 126 KNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLH 203 (1255)
T ss_pred cCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhh
Confidence 46778999999998 8998888899999999999998875 6777777777777777777542
Q ss_pred --------CchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccC----------------------c
Q 006055 132 --------GEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG----------------------S 181 (663)
Q Consensus 132 --------~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~----------------------~ 181 (663)
..+|.++..|.+|..+|||.|++. .+|..+-++++|+.|+||+|+|+. .
T Consensus 204 ms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~ 282 (1255)
T KOG0444|consen 204 MSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTV 282 (1255)
T ss_pred cccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhcc
Confidence 113445555555666666666655 555555555555555555555441 4
Q ss_pred CCCCCCCCCCCCEEEeecCcCCC-CCCcccccCCC
Q 006055 182 IPGFDDVLPNLQQLNVSNNLLNG-SIPKRFQTFGS 215 (663)
Q Consensus 182 ~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~~~~ 215 (663)
+|+.+..|++|+.|++.+|+|+- -||+.++.+..
T Consensus 283 LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~ 317 (1255)
T KOG0444|consen 283 LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQ 317 (1255)
T ss_pred chHHHhhhHHHHHHHhccCcccccCCccchhhhhh
Confidence 45555555555555555555432 24544444433
No 442
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.45 E-value=7.3e-14 Score=145.45 Aligned_cols=147 Identities=27% Similarity=0.279 Sum_probs=127.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.+..|+|++|.|+ .+....|.++++|+.++|.+|.|+. +|.......+|+.|+|.+|.|+..-.+.+.-++.|+.|||
T Consensus 79 ~t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 79 QTQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred ceeeeeccccccc-cCcHHHHhcCCcceeeeeccchhhh-cccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 4677999999999 5555578999999999999999986 8876667778999999999999877888999999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
|.|.|+..--++|..-.++++|+|++|.|+..-.+.|.++.+|..|.|+.|+++...+..|.+++.+.+
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~ 225 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLES 225 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhh
Confidence 999999555567877789999999999999888889999999999999999999666677877776655
No 443
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.4e-14 Score=160.92 Aligned_cols=242 Identities=26% Similarity=0.293 Sum_probs=176.7
Q ss_pred cccccccceEEEEEEec--CCcEEEEEEecCccc---CHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLE--MGTIVAVKRLKDVTI---SEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+|+.|-..... ....+|+|.+..... .......|..+-..+. |+|++++++...+.+..+++.+|..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g 105 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG 105 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence 45999999999887743 345677776654432 2334455777767776 99999999999999999999999999
Q ss_pred CChhHhh-ccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCC-C
Q 006055 450 GSLSALL-HGNKGAGRTPLNWEMRSLIALGAARGIEYLH-AQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGP-S 525 (663)
Q Consensus 450 gsL~~~l-~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH-~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~-~ 525 (663)
+++.+-+ +... ...+.........|+..++.|+| ..+ +.|||+||+|.+++..+ ..+++|||+|..+.. .
T Consensus 106 ~~~f~~i~~~~~----~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 106 GSLFSKISHPDS----TGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred cccccccccCCc----cCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 9999888 4321 13455566778899999999999 777 99999999999999999 999999999987765 2
Q ss_pred CC------CCC-CccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 ST------PNR-VAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ~~------~~~-~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
.. ..+ +..|+|||...+. ......|+||.|+++.-+++|..|++...... .....|..... .
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~---------~ 249 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNKG---------R 249 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeeccccc---------c
Confidence 21 235 6679999999884 44667899999999999999999997654433 11122211110 0
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.....+ ........++..+++..+|..|.+.+++..
T Consensus 250 ~~~~~~---~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 FTQLPW---NSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccCcc---ccCChhhhhcccccccCCchhccccccccc
Confidence 000011 122234556666888899999999998865
No 444
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=1e-12 Score=141.68 Aligned_cols=140 Identities=21% Similarity=0.274 Sum_probs=98.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc---------------------------C--------------HHHHHH
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---------------------------S--------------EREFKD 414 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------------------------~--------------~~~~~~ 414 (663)
+.||.|++|.||+|++++|+.||||+.+.... . +-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999754210 0 002344
Q ss_pred HHHHhhcC----CCCCcccceEEEE-ecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHH-HHHHHhh
Q 006055 415 KIEGVGAV----NHENLVPLRAYYY-SMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAAR-GIEYLHA 488 (663)
Q Consensus 415 e~~~l~~l----~h~niv~l~~~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-al~~LH~ 488 (663)
|...+.++ +|.+-+.+-..+. .....++||||+++++|.++...... .. .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHHHh
Confidence 54444443 2333333322332 23467999999999999887653210 12 23456666665 4778898
Q ss_pred cCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 489 QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 489 ~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
.| ++|+|+||.||++++++.++++|||++....+
T Consensus 276 ~g--~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DG--FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CC--ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88 99999999999999999999999999977654
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.40 E-value=4.6e-15 Score=148.01 Aligned_cols=152 Identities=24% Similarity=0.344 Sum_probs=113.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.+..|+..+|+++ ++|++ ++++..|..|++.+|.+... |+..-+++.|+.||..+|-++ .+|..++.+.+|..|+|
T Consensus 138 ~l~dl~~~~N~i~-slp~~-~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL 213 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPED-MVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYL 213 (565)
T ss_pred hhhhhhccccccc-cCchH-HHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHh
Confidence 4666777888888 78874 57888888888888888764 444445888888888888887 77778888888888888
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCC-CCCCCCCCEEEeecCcCCCCCCcccccCC---CCCccCCcCCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGF-DDVLPNLQQLNVSNNLLNGSIPKRFQTFG---SNSFLGNSLCG 225 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~~~---~~~~~~~~l~~ 225 (663)
..|+|. .+| +|+++..|.+|+++.|+|. .+|.. ...+++|..|||..|+++ ..|..+.-++ .+...||.+++
T Consensus 214 ~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~ 289 (565)
T KOG0472|consen 214 RRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS 289 (565)
T ss_pred hhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc
Confidence 888887 666 7888888888888888887 55554 447788888888888887 6776654444 44446777777
Q ss_pred CCCC
Q 006055 226 KPLQ 229 (663)
Q Consensus 226 ~p~~ 229 (663)
.|..
T Consensus 290 Lp~s 293 (565)
T KOG0472|consen 290 LPYS 293 (565)
T ss_pred CCcc
Confidence 6654
No 446
>PLN03150 hypothetical protein; Provisional
Probab=99.39 E-value=2.2e-13 Score=153.69 Aligned_cols=108 Identities=34% Similarity=0.524 Sum_probs=92.2
Q ss_pred CceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeec
Q 006055 120 LRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSN 199 (663)
Q Consensus 120 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 199 (663)
++.|+|++|.++|.+|..+..|++|+.|+|++|+|+|.+|..++++++|+.|+|++|+|+|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCcccccCC----CCCccCC-cCCCCC
Q 006055 200 NLLNGSIPKRFQTFG----SNSFLGN-SLCGKP 227 (663)
Q Consensus 200 N~l~g~~p~~~~~~~----~~~~~~~-~l~~~p 227 (663)
|+|+|.+|..+..+. .+.+.+| .+|+.|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999998776532 2334444 466654
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=4.1e-13 Score=131.15 Aligned_cols=199 Identities=20% Similarity=0.343 Sum_probs=138.8
Q ss_pred HhhcCCCCCcccceEEEEecC-----ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCc
Q 006055 418 GVGAVNHENLVPLRAYYYSMD-----EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPN 492 (663)
Q Consensus 418 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~ 492 (663)
-+-.+.|.||++++.|+.+.. ...++.|||..|++..+|++.+. ....+......+++.||..||.|||+..|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~-~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK-NQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH-hhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 344567999999999987643 36789999999999999986542 234467777788999999999999999999
Q ss_pred ceecCCCCCCEEEcCCCceEEeccccccccCCC---------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh
Q 006055 493 VSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT 563 (663)
Q Consensus 493 iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt 563 (663)
|+|+++..+-|++..++-+|++--.... ..+. ....+-+||.+||+-.....+..+|||+||....||..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999988885321111 1111 01123567999999877777888999999999999988
Q ss_pred CCCCCc-cccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 006055 564 GKAPTH-ALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIE 639 (663)
Q Consensus 564 g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~ 639 (663)
+...-. ....-+ ...-..+. ++..+. ..-...+.+|+.-.|..||+|++++.|.-
T Consensus 278 lEiq~tnseS~~~---~ee~ia~~--------i~~len----------~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 278 LEIQSTNSESKVE---VEENIANV--------IIGLEN----------GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred heeccCCCcceee---hhhhhhhh--------eeeccC----------ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 765421 110000 00000000 000000 00124566899999999999999987754
No 448
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.36 E-value=1.8e-13 Score=136.83 Aligned_cols=130 Identities=33% Similarity=0.436 Sum_probs=92.0
Q ss_pred cEEEEEcCCCCcccccCcc-----------------------ccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcc
Q 006055 70 RVTMLRLPGVALSGQIPLG-----------------------ILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQ 126 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~-----------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (663)
-|+.++++.|++. ++|.. .+..+++|+.|+|++|-+.. +|.+++.+..|+.|||+
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLS 466 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhh-cchhhhhhhhhheeccc
Confidence 3888888888776 55532 35667777777777777754 67777777777777777
Q ss_pred cccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 127 GNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+|+|. .+|..+..+..|+.+-.++|++....|+.+.+|.+|..|||.+|.|. .+|..++++.+|++|+|++|+|.
T Consensus 467 ~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 467 FNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 77776 67777766666766666667776444455777777777777777777 66777777777777777777776
No 449
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=7.7e-12 Score=117.73 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCccc-ceEEEEecCccEEEEEccCCCChhH
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVP-LRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
+.|+.|.++.||++... +..|++|...........+..|++++..+.+.++++ ++.+ .....++||||+++.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcccc
Confidence 56899999999999876 788999987654323345678888888886666554 4433 3345689999999987754
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---CcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG---PNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~---~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
.- . ....++.+++++|..||..+ ..++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 ED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 30 0 11234678999999999886 1259999999999999 66899999998853
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.25 E-value=2.2e-13 Score=141.82 Aligned_cols=152 Identities=28% Similarity=0.390 Sum_probs=121.4
Q ss_pred EEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccc
Q 006055 71 VTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 71 v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (663)
|..|.|..|.+. .||. .+.+|..|++|||+.|+++. +|..+..|+ |+.|-+++|+++ .+|+.++.+..|..||.+
T Consensus 100 Le~liLy~n~~r-~ip~-~i~~L~~lt~l~ls~NqlS~-lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s 174 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPE-AICNLEALTFLDLSSNQLSH-LPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVS 174 (722)
T ss_pred HHHHHHHhccce-ecch-hhhhhhHHHHhhhccchhhc-CChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhh
Confidence 344555566666 6776 35888889999999999875 777777776 888899999988 788888888899999999
Q ss_pred cccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCCCC
Q 006055 151 TNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCGKP 227 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~~p 227 (663)
.|.+. .+|+.++.|.+|+.|.+..|++. .+|..+..| .|..||+|.|+++ .||-.|.+++.|.. .+|+|...|
T Consensus 175 ~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 175 KNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 99988 78888999999999999999998 666666655 4888999999998 88988888877765 577777776
Q ss_pred CCCC
Q 006055 228 LQDC 231 (663)
Q Consensus 228 ~~~c 231 (663)
.+.|
T Consensus 251 AqIC 254 (722)
T KOG0532|consen 251 AQIC 254 (722)
T ss_pred HHHH
Confidence 6655
No 451
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=1e-11 Score=135.41 Aligned_cols=139 Identities=16% Similarity=0.223 Sum_probs=89.4
Q ss_pred cccccccceEEEEEEecC-CcEEEEEEecCcc---------------------------cC--------H------HHHH
Q 006055 376 EVLGKGTFGTAYKAVLEM-GTIVAVKRLKDVT---------------------------IS--------E------REFK 413 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~---------------------------~~--------~------~~~~ 413 (663)
+.||+|++|.||+|.+++ |+.||||+.+... .. . -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999877 9999999986321 00 0 1233
Q ss_pred HHHHHhhcC----CCCCcccceEEEEe-cCccEEEEEccCCCChhHhh--ccCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 006055 414 DKIEGVGAV----NHENLVPLRAYYYS-MDEKLLVYDYLTMGSLSALL--HGNKGAGRTPLNWEMRSLIALGAARGIEYL 486 (663)
Q Consensus 414 ~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~ey~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~~ia~al~~L 486 (663)
+|...+.++ .+.+.+.+-..+.+ ....+|||||++|+.+.++- ... +.....+.......++. -+
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g~d~~~la~~~v~~~~~-------Qi 276 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-GTDMKLLAERGVEVFFT-------QV 276 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-CCCHHHHHHHHHHHHHH-------HH
Confidence 344333333 24444443333332 35678999999999998752 211 11011122222222222 23
Q ss_pred hhcCCcceecCCCCCCEEEcCCC----ceEEeccccccccCC
Q 006055 487 HAQGPNVSHGNIKSSNILLTKSY----EARVSDFGLAHLVGP 524 (663)
Q Consensus 487 H~~~~~iiHrdlk~~Nill~~~~----~~kl~Dfg~a~~~~~ 524 (663)
+..| ++|+|+||.||+++.++ .+++.|||++....+
T Consensus 277 f~~G--ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 FRDG--FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HhCC--eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4566 99999999999999988 999999999977654
No 452
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.21 E-value=4e-10 Score=120.98 Aligned_cols=163 Identities=20% Similarity=0.256 Sum_probs=124.9
Q ss_pred ecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCH
Q 006055 391 LEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNW 469 (663)
Q Consensus 391 ~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~ 469 (663)
..++.+|.|...+.... ......+.++.++.+|||||++++..+......|+|+|-+. -|..++.. +..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHH
Confidence 55688888888765533 13456777888999999999999999999999999999764 46666653 234
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----CCCCccccCccccCCCCC
Q 006055 470 EMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST----PNRVAGYRAPEVTDPCKV 545 (663)
Q Consensus 470 ~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~y~aPE~~~~~~~ 545 (663)
......+.||+.||.|||+.+ .++|++|.-..|+++..|+.||++|.++........ ..--..|..|+.+....
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~-~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC-NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc-
Confidence 556667889999999999776 699999999999999999999999988754432221 11122377777765443
Q ss_pred CCcchhhhHHHHHHHHHhCCC
Q 006055 546 SQKADVYSFGVLLLELLTGKA 566 (663)
Q Consensus 546 ~~~~Dv~slGvvl~elltg~~ 566 (663)
-..|.|-|||+++|++.|..
T Consensus 182 -~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred -cchhhhhHHHHHHHHhCccc
Confidence 24699999999999999933
No 453
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.20 E-value=1.5e-11 Score=139.59 Aligned_cols=123 Identities=32% Similarity=0.512 Sum_probs=75.1
Q ss_pred EecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccc
Q 006055 65 ECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHL 144 (663)
Q Consensus 65 ~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 144 (663)
.|-..+.+.|+|++++++ .+|..+ .++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|+ .+|..+. .+|
T Consensus 174 ~Cl~~~~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L 243 (754)
T PRK15370 174 DCLKNNKTELRLKILGLT-TIPACI---PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTI 243 (754)
T ss_pred hhcccCceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccc
Confidence 455556677777777777 566532 2467777777777764 555443 46777777777776 4555443 356
Q ss_pred cccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 145 VRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+
T Consensus 244 ~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 244 QEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred cEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 66666666666 5555543 35666666666666 4454432 35666666666666
No 454
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.20 E-value=1.3e-11 Score=139.17 Aligned_cols=105 Identities=30% Similarity=0.449 Sum_probs=54.9
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccccccc
Q 006055 94 TSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFL 173 (663)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 173 (663)
.+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|... ++|+.|+|
T Consensus 342 ~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdL 409 (788)
T PRK15387 342 SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVLP---SELKELMV 409 (788)
T ss_pred cccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCcc---cCCCEEEc
Confidence 367777777777775 4432 234555566666665 24432 234556666666665 344322 34555555
Q ss_pred ccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCC
Q 006055 174 ENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGS 215 (663)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~ 215 (663)
++|+|+ .+|.. ..+|+.|+|++|+|+ .+|..+.++..
T Consensus 410 S~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 410 SGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred cCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccC
Confidence 555555 24432 234555555555555 45554444433
No 455
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.19 E-value=2.8e-11 Score=137.39 Aligned_cols=143 Identities=26% Similarity=0.380 Sum_probs=115.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|+|+ .+|...+ ++|+.|+|++|+|++ +|..+. .+|+.|+|++|++. .+|..+. .+|+.|+
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 47899999999999 8897543 689999999999986 676654 58999999999999 6787764 5899999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCc-ccccCCCCCccCCcCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPK-RFQTFGSNSFLGNSLCGKP 227 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~~~~~~~~~~~l~~~p 227 (663)
|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+. +|. ...++..+.+.+|.+.+.|
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~LP 341 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTSLP 341 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-CCccccccceeccccCCccccCC
Confidence 9999999 6787765 58999999999999 4565442 579999999999995 454 3445666667777777655
Q ss_pred C
Q 006055 228 L 228 (663)
Q Consensus 228 ~ 228 (663)
.
T Consensus 342 ~ 342 (754)
T PRK15370 342 A 342 (754)
T ss_pred h
Confidence 3
No 456
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=2.6e-11 Score=129.00 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=169.1
Q ss_pred hhccccc--ccceEEEEEEe---cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 374 SAEVLGK--GTFGTAYKAVL---EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 374 ~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
....+|. |.+|.||.+.. .++..+|+|+-+... .....-.+|+...+.+ .|+|.++....+.+.+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 3567899 99999999875 568899999843321 2223334555555555 5999999888899999999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccc
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAAR----GIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLA 519 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a 519 (663)
|++. .+|..+.+.... .++....+.+..+..+ |+.++|... ++|-|+||.||++..+ ...++.|||+.
T Consensus 198 E~~~-~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred cccc-chhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCccee
Confidence 9776 588888775432 2455556666666666 999999997 9999999999999999 88999999999
Q ss_pred cccCCCCCC---------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 520 HLVGPSSTP---------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 520 ~~~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
...++.... .+.+-|++||..++ .++...|+|++|.++.+..++..+........ |.+ ++..
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~~--~r~~ 341 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS------WSQ--LRQG 341 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC------ccc--cccc
Confidence 877665311 23445999999876 45778999999999999999888764432211 110 0000
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+ . .....+.-..++..++.++++.+|-.|++.+.+..
T Consensus 342 ~-----i----p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 342 Y-----I----PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c-----C----chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0 11111122234555788999999999999887654
No 457
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.18 E-value=3.1e-12 Score=140.42 Aligned_cols=131 Identities=31% Similarity=0.355 Sum_probs=103.9
Q ss_pred cEEEEEcCCCCcccccCccccC-------------------------CCCCCCEEEccCCCCCCCCCccccCCCCCceEE
Q 006055 70 RVTMLRLPGVALSGQIPLGILG-------------------------NLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLY 124 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~-------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (663)
.+..|+|..|+|. .+|+..|. .++.|+.|+|.+|.|+...-+.|.+..+|+.|+
T Consensus 311 sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLh 389 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLH 389 (1081)
T ss_pred eeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeee
Confidence 4888888888886 66653321 234577788888888877666788888888999
Q ss_pred cccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCC
Q 006055 125 LQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
|++|+|.......+.+|..|+.|+||+|+++ .+|..+.++..|++|...+|+|. .+| .+..++.|+.+|||.|+|+-
T Consensus 390 LsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 390 LSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred ecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 9999888545556788888888899999888 78888888888888888888888 777 67888888888988888874
No 458
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=8.9e-12 Score=115.84 Aligned_cols=109 Identities=33% Similarity=0.476 Sum_probs=31.0
Q ss_pred CCCCCCCEEEccCCCCCCCCCcccc-CCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCC-cccccc
Q 006055 91 GNLTSLRTLSLRFNSLTSQLPSDLA-SCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGF-KNLTKL 168 (663)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L 168 (663)
.+...++.|+|++|.|+. + +.++ .+.+|+.|+|++|.++ .++ .+..+++|+.|+|++|+|+ .++..+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 455566666666666654 2 2344 4566666666666666 333 3556666666666666666 333333 246666
Q ss_pred cccccccccccCcCC-CCCCCCCCCCEEEeecCcCCC
Q 006055 169 KTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 169 ~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g 204 (663)
+.|+|++|+|...-. ..+..+++|+.|+|.+|+++.
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 667777776653111 234566777777777777763
No 459
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.14 E-value=7.6e-11 Score=133.18 Aligned_cols=113 Identities=29% Similarity=0.403 Sum_probs=71.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
+++.|+|.+|+|+ .+|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.|+ .+|..+ .+|+.|+|
T Consensus 223 ~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~L 289 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWI 289 (788)
T ss_pred CCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch---hhcCEEEC
Confidence 5677777777777 5664 24677777777777775 4532 356777777777776 455432 45777788
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
++|+|+ .+|.. +++|+.|+|++|+|++ +|... .+|+.|++++|+|+
T Consensus 290 s~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~ 335 (788)
T PRK15387 290 FGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLT 335 (788)
T ss_pred cCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCccc
Confidence 888887 45543 3678888888888884 44322 23444444444444
No 460
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=4.2e-12 Score=122.48 Aligned_cols=130 Identities=30% Similarity=0.357 Sum_probs=108.2
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
-+++|||++|.++ .|.. ...-++.++.|+||+|+|... ..+..|++|+.||||+|.++ .+..+-..|-+.+.|.|
T Consensus 285 ~LtelDLS~N~I~-~iDE-SvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDE-SVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhccccccchh-hhhh-hhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 4788999999998 7776 457789999999999999753 34888999999999999998 66667778889999999
Q ss_pred ccccccccCCCCCcccccccccccccccccCcC-CCCCCCCCCCCEEEeecCcCCCCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSI-PGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
+.|.|... +.++.|-+|.+||+++|+|.... -..++++|.|++|.|.+|+|.+.+
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 99998733 45788889999999999997422 246889999999999999998654
No 461
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.13 E-value=4e-12 Score=139.55 Aligned_cols=129 Identities=30% Similarity=0.391 Sum_probs=111.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|.|.+|.|+...=+ .|.++.+|+.|+|++|+|.......+.++..|++|+||+|.|+ .+|..+..+..|++|.
T Consensus 359 ~~Lq~LylanN~Ltd~c~p-~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFP-VLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred HHHHHHHHhcCcccccchh-hhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 3688899999999865443 5789999999999999998744557899999999999999999 8999999999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccC-cCCCCCCCCCCCCEEEeecCcC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNNLL 202 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l 202 (663)
..+|+|. ..| .+.++++|+.+||+.|+|+- .+|..... ++|++|||++|.-
T Consensus 437 ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 437 AHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTR 488 (1081)
T ss_pred hcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcc
Confidence 9999998 777 89999999999999999974 34444332 8999999999984
No 462
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=1.5e-11 Score=114.35 Aligned_cols=120 Identities=32% Similarity=0.380 Sum_probs=50.0
Q ss_pred cEEEEEcCCCCcccccCccccC-CCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhh-cCCcccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILG-NLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFL-VGLHHLVRL 147 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 147 (663)
+++.|+|.+|+|+ .|.. ++ .+.+|+.|+|++|.|+. ++ .+..+++|++|+|++|+++. ++..+ ..+++|+.|
T Consensus 20 ~~~~L~L~~n~I~-~Ie~--L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIEN--LGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQEL 93 (175)
T ss_dssp -----------------S----TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EE
T ss_pred ccccccccccccc-cccc--hhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEE
Confidence 5788999999998 6653 55 68899999999999987 33 58889999999999999994 54444 468999999
Q ss_pred ccccccccccC-CCCCcccccccccccccccccCcCCC----CCCCCCCCCEEE
Q 006055 148 NLATNNFSGEI-PSGFKNLTKLKTLFLENNRLSGSIPG----FDDVLPNLQQLN 196 (663)
Q Consensus 148 ~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~ 196 (663)
+|++|+|...- -..+..+++|+.|+|.+|.++. .+. .+..+|+|+.||
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-SEET
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhheeC
Confidence 99999997421 2346778999999999999983 343 356678888876
No 463
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=7.7e-10 Score=108.89 Aligned_cols=140 Identities=20% Similarity=0.218 Sum_probs=107.4
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCC--CcccceEEEEecC---ccEEEEEccC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHE--NLVPLRAYYYSMD---EKLLVYDYLT 448 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~ey~~ 448 (663)
+.|+.|.++.||++...+|+.+++|....... ....+..|.+++..+++. ++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987678999998765432 355788999999998764 4566777665432 5689999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-------------------------------------- 490 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-------------------------------------- 490 (663)
+.++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9888776531 13566777778888888888888421
Q ss_pred ----------------CcceecCCCCCCEEEcC--CCceEEeccccccc
Q 006055 491 ----------------PNVSHGNIKSSNILLTK--SYEARVSDFGLAHL 521 (663)
Q Consensus 491 ----------------~~iiHrdlk~~Nill~~--~~~~kl~Dfg~a~~ 521 (663)
..++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23689999999999998 66789999998753
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.09 E-value=1.6e-09 Score=102.81 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEecC-------CcEEEEEEecCcc----------------------cC-HHHHH----HHHHHhhc
Q 006055 376 EVLGKGTFGTAYKAVLEM-------GTIVAVKRLKDVT----------------------IS-EREFK----DKIEGVGA 421 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~----------------------~~-~~~~~----~e~~~l~~ 421 (663)
..||.|--+.||.|...+ +..+|||+.+... .+ .+.+. +|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 5799999874210 01 12233 78888888
Q ss_pred CCC--CCcccceEEEEecCccEEEEEccCCCChhH-hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCcceecC
Q 006055 422 VNH--ENLVPLRAYYYSMDEKLLVYDYLTMGSLSA-LLHGNKGAGRTPLNWEMRSLIALGAARGIEYL-HAQGPNVSHGN 497 (663)
Q Consensus 422 l~h--~niv~l~~~~~~~~~~~lv~ey~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~L-H~~~~~iiHrd 497 (663)
+.. -++...+++ ...++||||+.++.+.. .+.. ..++......+..+++.+|.+| |+.+ |+|+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKECN--LVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhCC--eecCC
Confidence 753 345555554 57889999998754422 2321 1244455667788999999999 7777 99999
Q ss_pred CCCCCEEEcCCCceEEeccccccccC
Q 006055 498 IKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 498 lk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|++.||+++ ++.+.++|||.+....
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999997 4689999999887654
No 465
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.98 E-value=1.2e-09 Score=132.24 Aligned_cols=148 Identities=24% Similarity=0.238 Sum_probs=91.0
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.++.|++.++.+. .+|.. | .+.+|+.|+|++|+|.. +|..+..+++|+.|+|++|...+.+|. +..+++|+.|+|
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~-f-~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSN-F-RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred ccEEEEecCCCCC-CCCCc-C-CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 4666666666665 66653 2 45677777777777654 566666677777777776654445553 566677777777
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSL 223 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l 223 (663)
++|.....+|..++++++|+.|++++|..-+.+|..+ ++++|+.|+|++|...+.+|....++..+.+.+|.+
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i 737 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAI 737 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCcc
Confidence 7665555667777777777777777654434555544 566677777766655555555444454444444443
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.98 E-value=2.9e-10 Score=121.06 Aligned_cols=240 Identities=19% Similarity=0.194 Sum_probs=168.0
Q ss_pred cccccccceEEEEEEe--cCCcEEEEEEecCcccC---HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL--EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
..||.|.|+.||.... .++..|++|.+...... +..-..|+.+...+ .|.++++....|......++=-||+++
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~ 350 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG 350 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence 5799999999998773 56889999988655222 22234455554444 588999988888888888899999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccCCCC-C
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVGPSS-T 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~-~ 527 (663)
+++.....- ...++...++++..+++.++.++|+.. ++|+|+||+||++..+ +.-+++|||.++.+.-.. .
T Consensus 351 ~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~ 423 (524)
T KOG0601|consen 351 GSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV 423 (524)
T ss_pred cchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccccccccceeccc
Confidence 988766521 234677788899999999999999998 9999999999999876 788999999987533222 2
Q ss_pred CCCCcccc--CccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 528 PNRVAGYR--APEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 528 ~~~~~~y~--aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
.....++. +|+......+..++|++|||.-+.|.+++..--.... .|. . +..+... .
T Consensus 424 ~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~-~-i~~~~~p-----------~ 482 (524)
T KOG0601|consen 424 FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSL-T-IRSGDTP-----------N 482 (524)
T ss_pred ccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cce-e-eeccccc-----------C
Confidence 22233344 4555555677889999999999999999865432110 000 0 0011000 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
......++..+...+...++..||.+.++..+....+.
T Consensus 483 ~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 483 LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 11111455666667889999999999988877665543
No 467
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.96 E-value=6.6e-11 Score=123.53 Aligned_cols=135 Identities=29% Similarity=0.323 Sum_probs=102.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCC---CCEEEccCCCCCC----CCCccccCC-CCCceEEcccccccCc----hhh
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTS---LRTLSLRFNSLTS----QLPSDLASC-SNLRNLYLQGNHFSGE----VPL 136 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~ 136 (663)
.+++.|+|++|.+.+..+. .+..+.. |+.|+|++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 81 ~~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 81 CGLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred CceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 5899999999998754443 4455554 9999999999873 233445666 8999999999999843 445
Q ss_pred hhcCCcccccccccccccccc----CCCCCcccccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCCC
Q 006055 137 FLVGLHHLVRLNLATNNFSGE----IPSGFKNLTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
.+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|++++|++++
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 567778899999999998842 334455667899999999998743 34456778899999999999885
No 468
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.96 E-value=1.7e-09 Score=130.99 Aligned_cols=144 Identities=27% Similarity=0.339 Sum_probs=92.7
Q ss_pred cceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcC
Q 006055 61 WAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVG 140 (663)
Q Consensus 61 w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 140 (663)
|.|+.+ ..+++.|+|+++...+.+|. ++.+++|+.|+|++|.....+|..+.++++|+.|+|++|..-+.+|..+ +
T Consensus 627 ~~~~~~-l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 627 WDGVHS-LTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred cccccc-CCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-C
Confidence 666533 35688888887765557774 6778888888888876556677778888888888887764334555543 4
Q ss_pred Ccccccccccc---------------------ccccccCCCCC------------------------------ccccccc
Q 006055 141 LHHLVRLNLAT---------------------NNFSGEIPSGF------------------------------KNLTKLK 169 (663)
Q Consensus 141 l~~L~~L~l~~---------------------N~l~~~~p~~~------------------------------~~l~~L~ 169 (663)
+++|+.|+|++ |.+. .+|..+ ...++|+
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~ 781 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT 781 (1153)
T ss_pred CCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccch
Confidence 44444444444 4433 233221 0123566
Q ss_pred ccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc
Q 006055 170 TLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR 209 (663)
Q Consensus 170 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 209 (663)
.|+|++|...+.+|..++++++|+.|+|++|..-+.+|..
T Consensus 782 ~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~ 821 (1153)
T PLN03210 782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG 821 (1153)
T ss_pred heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC
Confidence 7777777766678888888888888888877544466654
No 469
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.95 E-value=1.1e-08 Score=93.80 Aligned_cols=132 Identities=20% Similarity=0.300 Sum_probs=99.8
Q ss_pred cccccccceEEEEEEecCCcEEEEEE-ecCc-cc-------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKR-LKDV-TI-------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~-~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
..+++|+-+.+|.+.+. |..+++|. +++. .. ....-.+|..++.+++--.|.-.+-+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35889999999999875 55566664 3322 11 123456788888887766666666677788889999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
+++-.|.+.+... +..++..+-.-+.-||..+ |+|+||.++||.+..+. +.++|||++.+..
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 9999999888642 2345566667778899999 99999999999998765 9999999997543
No 470
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.94 E-value=1.1e-08 Score=93.27 Aligned_cols=141 Identities=16% Similarity=0.240 Sum_probs=103.8
Q ss_pred cccccccceEEEEEEecCCcEEEEEE-ecCc--------ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKR-LKDV--------TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
++|-+|+-+.|+++.+. |+...||. +.+. ....+.-.+|.+.+.+++--.|.-..-++.+.....++|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 57889999999999987 88877774 3221 12245677889988887665665555567777888999999
Q ss_pred cCC-CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEecccccccc
Q 006055 447 LTM-GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~~ 522 (663)
.++ -++.+++..... ...........+..|-+.+.-||..+ |+|+||..+||++..++. +.++|||++...
T Consensus 92 ~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 92 IDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 976 477777765331 11222222567778888899999998 999999999999976653 589999998544
No 471
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.94 E-value=8.7e-11 Score=122.78 Aligned_cols=137 Identities=30% Similarity=0.401 Sum_probs=121.0
Q ss_pred cCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccc
Q 006055 67 EQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVR 146 (663)
Q Consensus 67 ~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 146 (663)
.-..++.|+|+.|+++ .+|..+ ..|+ |+.|-+++|+++. +|..++.+..|..||.+.|++. .+|..++.|.+|+.
T Consensus 119 ~L~~lt~l~ls~NqlS-~lp~~l-C~lp-Lkvli~sNNkl~~-lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~ 193 (722)
T KOG0532|consen 119 NLEALTFLDLSSNQLS-HLPDGL-CDLP-LKVLIVSNNKLTS-LPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRD 193 (722)
T ss_pred hhhHHHHhhhccchhh-cCChhh-hcCc-ceeEEEecCcccc-CCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHH
Confidence 3467889999999999 888864 5554 9999999999975 8999999999999999999998 78999999999999
Q ss_pred cccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCccccc
Q 006055 147 LNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQT 212 (663)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 212 (663)
|++..|++. .+|..+..| .|..||+|.|+++ .||-.|..|+.|++|-|.+|.|+ ..|..+..
T Consensus 194 l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~ 255 (722)
T KOG0532|consen 194 LNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICE 255 (722)
T ss_pred HHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHh
Confidence 999999998 778888855 5889999999999 99999999999999999999999 55655443
No 472
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=3.4e-08 Score=103.12 Aligned_cols=171 Identities=25% Similarity=0.295 Sum_probs=130.0
Q ss_pred cceEEEEEE-ecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEe----cCccEEEEEccCC-CChhH
Q 006055 382 TFGTAYKAV-LEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYS----MDEKLLVYDYLTM-GSLSA 454 (663)
Q Consensus 382 ~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~-gsL~~ 454 (663)
-..+.|++. ..||..|++|+++..+ ........-+++++++.|+|+|++.+++.. +...++||+|+++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 345779998 6689999999995432 223334556788999999999999998763 4457899999885 46766
Q ss_pred hhccCC-C---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 455 LLHGNK-G---------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 455 ~l~~~~-~---------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
.--... . ......++...|.++.|+..||.++|+.| +.-+-|.+.+|+++.+.+++|+.+|......+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 543221 1 12345788999999999999999999999 88899999999999999999999998877765
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCC
Q 006055 525 SSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAP 567 (663)
Q Consensus 525 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p 567 (663)
+... -+. --++-|.-.||.++..|.||..-
T Consensus 446 d~~~----------~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPTE----------PLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCc----------chh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 5411 111 12456999999999999999653
No 473
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=7.6e-10 Score=84.63 Aligned_cols=59 Identities=32% Similarity=0.426 Sum_probs=27.5
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccccccc
Q 006055 95 SLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNN 153 (663)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 153 (663)
+|+.|+|++|+|+...+..|.++++|++|+|++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444333444444444444444444444444444444444444444444
No 474
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.89 E-value=3.4e-08 Score=99.17 Aligned_cols=141 Identities=14% Similarity=0.139 Sum_probs=101.6
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc------------CHHHHHHHHHHhhcCCCCCc--ccceEEEEe----
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI------------SEREFKDKIEGVGAVNHENL--VPLRAYYYS---- 436 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~---- 436 (663)
.+.+-+-....|++..+. |+.|.||+...... ....+.+|...+.++...+| ...+++...
T Consensus 27 ~e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 345555555567777664 88999997743221 11247788888888754433 345556543
Q ss_pred -cCccEEEEEccCCC-ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-------
Q 006055 437 -MDEKLLVYDYLTMG-SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK------- 507 (663)
Q Consensus 437 -~~~~~lv~ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~------- 507 (663)
....++|+|++++. +|.+++.... ..+.+...+..++.+++..+.-||..| |+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCC
Confidence 23468999999986 8998885321 123456777889999999999999999 999999999999975
Q ss_pred CCceEEeccccccc
Q 006055 508 SYEARVSDFGLAHL 521 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~ 521 (663)
+..+.++||+.++.
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46799999998864
No 475
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.88 E-value=3e-10 Score=113.91 Aligned_cols=133 Identities=26% Similarity=0.333 Sum_probs=113.1
Q ss_pred CcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccccc-ccccccC
Q 006055 80 ALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLAT-NNFSGEI 158 (663)
Q Consensus 80 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~ 158 (663)
+|+ .+|.+. -+.-+.|+|..|+|+.+.|..|+.+++|+.||||+|+|+-+-|.+|.+|.+|..|-+.+ |+|+...
T Consensus 57 GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~ 132 (498)
T KOG4237|consen 57 GLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLP 132 (498)
T ss_pred Ccc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhh
Confidence 444 566421 24567899999999998889999999999999999999999999999999998887776 9999655
Q ss_pred CCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCc-ccccCCCCC
Q 006055 159 PSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPK-RFQTFGSNS 217 (663)
Q Consensus 159 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~~~~~~ 217 (663)
-..|++|.+|+.|.+.-|++.-...+.|..+++|..|.+-+|.+. .++. .|..+...+
T Consensus 133 k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~ 191 (498)
T KOG4237|consen 133 KGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIK 191 (498)
T ss_pred hhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccc
Confidence 667999999999999999999777889999999999999999998 5555 666665544
No 476
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.1e-09 Score=83.77 Aligned_cols=60 Identities=42% Similarity=0.552 Sum_probs=34.4
Q ss_pred cccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcC
Q 006055 143 HLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLL 202 (663)
Q Consensus 143 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 202 (663)
+|+.|++++|+|+...+..|.++++|++|++++|+|+...|..|..+++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555543344555566666666666666555555566666666666666653
No 477
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.86 E-value=1.2e-10 Score=121.68 Aligned_cols=136 Identities=24% Similarity=0.200 Sum_probs=97.6
Q ss_pred CcEEEEEcCCCCccc------ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCC---CceEEcccccccC----chh
Q 006055 69 NRVTMLRLPGVALSG------QIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSN---LRNLYLQGNHFSG----EVP 135 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g------~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p 135 (663)
..++.|+++++.+.+ .++. .+..+++|+.|+|++|.+.+..+..+..+.+ |++|+|++|++++ .+.
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~-~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~ 129 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQ-GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLA 129 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHH-HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHH
Confidence 347788888877752 2222 4567888999999998887666666666655 9999999988873 334
Q ss_pred hhhcCC-cccccccccccccccc----CCCCCcccccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCCCC
Q 006055 136 LFLVGL-HHLVRLNLATNNFSGE----IPSGFKNLTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 136 ~~~~~l-~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
..+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.
T Consensus 130 ~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 208 (319)
T cd00116 130 KGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE 208 (319)
T ss_pred HHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH
Confidence 456666 8889999999988742 334556677888999999888742 333445567899999999888744
No 478
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.85 E-value=1.4e-09 Score=117.27 Aligned_cols=130 Identities=35% Similarity=0.477 Sum_probs=103.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCC-CCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLT-SLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..++.|++.+|.++ .||+. .+.+. +|+.|++++|++.. +|..+..+++|+.|++++|+++ .+|...+.+++|+.|
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~-~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPL-IGLLKSNLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred cceeEEecCCcccc-cCccc-cccchhhcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 36889999999998 78763 46664 89999999999976 6677899999999999999998 677777688899999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
++++|+++ .+|.....+..|++|.+++|++. .++..+..+.++..|.+.+|++..
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee
Confidence 99999998 77776666677888888888654 455556677777777777777763
No 479
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.84 E-value=1.6e-09 Score=116.63 Aligned_cols=153 Identities=27% Similarity=0.338 Sum_probs=120.6
Q ss_pred CccceeEecCCcEE---EEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCC-CCceEEcccccccCch
Q 006055 59 CKWAGVECEQNRVT---MLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCS-NLRNLYLQGNHFSGEV 134 (663)
Q Consensus 59 c~w~gv~c~~~~v~---~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~ 134 (663)
+.+.+..+...... .|++..|.+...+.. +..++.++.|++.+|.++. +|.....+. +|+.|++++|++. .+
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l 155 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSNISE--LLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SL 155 (394)
T ss_pred cccccccccccCCCCCceeeccccccccCchh--hhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hh
Confidence 66666666655555 588888888544443 4677899999999999987 677777775 9999999999998 67
Q ss_pred hhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC
Q 006055 135 PLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 135 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
|..+..+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|........|+.|++++|++. .++..+.++.
T Consensus 156 ~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~ 232 (394)
T COG4886 156 PSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLK 232 (394)
T ss_pred hhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcc
Confidence 778899999999999999998 77777778899999999999999 77776666677999999999644 4555555555
Q ss_pred CCCc
Q 006055 215 SNSF 218 (663)
Q Consensus 215 ~~~~ 218 (663)
.+..
T Consensus 233 ~l~~ 236 (394)
T COG4886 233 NLSG 236 (394)
T ss_pred cccc
Confidence 4443
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.81 E-value=1.1e-09 Score=122.54 Aligned_cols=235 Identities=22% Similarity=0.211 Sum_probs=149.4
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.+-+|.++.++.+.- ..|...+.|...... ...+....+-.+.-..+||-+++..-.+......+||++|+.++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 4688899999988763 234444444332211 01111222222222234455555444445567789999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC------
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP------ 524 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~------ 524 (663)
+|...+|... +.+..........+.++++|||... +.|||++|.|.++..++..++.|||.....+-
T Consensus 890 ~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 890 DLPSKLHNSG-----CLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred CchhhhhcCC-----CcccccccchhHHHHhhhhccccch--hhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence 9999998654 2333333444556778999999886 89999999999999999999999984321100
Q ss_pred ---------------C--------------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC
Q 006055 525 ---------------S--------------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE 575 (663)
Q Consensus 525 ---------------~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~ 575 (663)
. ....+++.|.+||...+......+|+|+.|++++|.++|..||.......
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh
Confidence 0 00124556999999999999999999999999999999999997643321
Q ss_pred CCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006055 576 GVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMS 632 (663)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ 632 (663)
.++++.... ..-...+.+...+..+++..-+..+|.+|-.+.
T Consensus 1043 ------~f~ni~~~~---------~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 ------IFENILNRD---------IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ------hhhccccCC---------CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 111221111 000111222233444555566778888887665
No 481
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=4.8e-08 Score=92.45 Aligned_cols=125 Identities=22% Similarity=0.254 Sum_probs=82.4
Q ss_pred EEEEEEecCCcEEEEEEecCc---------------c--------cC----HHHHHHHHHHhhcCCCC--CcccceEEEE
Q 006055 385 TAYKAVLEMGTIVAVKRLKDV---------------T--------IS----EREFKDKIEGVGAVNHE--NLVPLRAYYY 435 (663)
Q Consensus 385 ~Vy~~~~~~g~~vavK~l~~~---------------~--------~~----~~~~~~e~~~l~~l~h~--niv~l~~~~~ 435 (663)
.||.|...+|..+|||+.+.. . .. .....+|.+.|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 489999888999999987421 0 00 13467899999999766 45555544
Q ss_pred ecCccEEEEEccC--CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 436 SMDEKLLVYDYLT--MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEY-LHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 436 ~~~~~~lv~ey~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~-LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
....+||||++ +..+..+.... ++......++.++...+.. +|..| |+|+||.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc-eEE
Confidence 36789999999 55554443321 1123345566777775555 46777 9999999999999988 999
Q ss_pred EeccccccccC
Q 006055 513 VSDFGLAHLVG 523 (663)
Q Consensus 513 l~Dfg~a~~~~ 523 (663)
++|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999887654
No 482
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.75 E-value=7.9e-10 Score=107.01 Aligned_cols=130 Identities=25% Similarity=0.284 Sum_probs=98.4
Q ss_pred CCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccccc
Q 006055 92 NLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTL 171 (663)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 171 (663)
....|+.||||+|.|+. +..+..-++.++.|+||+|.+. .+-. +..|++|+.||||+|.++ .+..+-..|-+++.|
T Consensus 282 TWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchhh-hhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 34679999999999986 6777888899999999999998 4444 888999999999999998 555666778889999
Q ss_pred ccccccccCcCCCCCCCCCCCCEEEeecCcCCCCC-CcccccCCC---CCccCCcCCCCC
Q 006055 172 FLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI-PKRFQTFGS---NSFLGNSLCGKP 227 (663)
Q Consensus 172 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~~~~---~~~~~~~l~~~p 227 (663)
.|+.|.|. .+. -+..+-+|..||+++|++...- -..+++++- +.+.+|++.+.+
T Consensus 358 ~La~N~iE-~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 358 KLAQNKIE-TLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ehhhhhHh-hhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 99999987 222 2567788999999999986211 123344432 334566665544
No 483
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.68 E-value=8.4e-10 Score=94.95 Aligned_cols=141 Identities=23% Similarity=0.235 Sum_probs=104.3
Q ss_pred CcEEEEEcCCCCcccccCcc--ccCCCCCCCEEEccCCCCCCCCCcccc-CCCCCceEEcccccccCchhhhhcCCcccc
Q 006055 69 NRVTMLRLPGVALSGQIPLG--ILGNLTSLRTLSLRFNSLTSQLPSDLA-SCSNLRNLYLQGNHFSGEVPLFLVGLHHLV 145 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 145 (663)
.....++|+++.|- .++.. .+....+|+..+|++|.|.. .|+.|. .++.++.|+|++|.|+ .+|..+..++.|+
T Consensus 27 kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 27 KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh
Confidence 35667888888775 56542 23456677888999999987 555554 5568999999999998 7888899999999
Q ss_pred ccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC
Q 006055 146 RLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 146 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
.|+++.|.|. ..|..+..|.+|-.|+..+|.+. .+|..+-.-.++-..++.+|.+.+.-|..++.+.
T Consensus 104 ~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 104 SLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred hcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccccC
Confidence 9999999998 77888888999999999999887 5554322223333345577777777666555443
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=1.6e-07 Score=95.67 Aligned_cols=264 Identities=14% Similarity=0.142 Sum_probs=154.7
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEE-----E-Eec-CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAY-----Y-YSM-DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-----~-~~~-~~~~lv~ey 446 (663)
+..||+|+-+.+|-.--- .-.+.|++...... .-.+.+.+|... .||-+-.-+.+ + -+. +...++|..
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa--~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~ 91 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPA--AQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK 91 (637)
T ss_pred CccccCCccceeeecchh--hchhheeecCCCch--HHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence 457999999999964311 11244666543221 112334444444 56543331111 0 111 124577776
Q ss_pred cCCCC-hhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 447 LTMGS-LSALLHGNKG-AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 447 ~~~gs-L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
+.+.. ...++..... ..-...+|...++.+..+|.+.+.||..| .+-+|+.++|+|+.+++.+.|.|-..-.....
T Consensus 92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n 169 (637)
T COG4248 92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN 169 (637)
T ss_pred CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecCceEEEEcccceeeccC
Confidence 65542 2233322111 12235799999999999999999999999 77799999999999999999988654443332
Q ss_pred CCC---CCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhC-CCCCccccCCCC--CChH-HHHHHHHh---h
Q 006055 525 SST---PNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTG-KAPTHALLNEEG--VDLP-RWVQSIVK---D 589 (663)
Q Consensus 525 ~~~---~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg-~~p~~~~~~~~~--~~~~-~~~~~~~~---~ 589 (663)
+.. ..+...|.+||.-. +...+...|-|.+||++++++.| ++||.+...... .-.. .+....+. +
T Consensus 170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~ 249 (637)
T COG4248 170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD 249 (637)
T ss_pred CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh
Confidence 221 33556699999754 34456778999999999999986 999987532211 1111 11000000 0
Q ss_pred cccccccchhhhcccChHHHHHHHHHHHHHccCCC--CCCCCCHHHHHHHHHhhCCCCCC
Q 006055 590 EWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQY--PDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~d--P~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
......-.+ .....+-...++..+..+|+... +.-|||++-.+..|.++.++...
T Consensus 250 ~~~g~~p~P---~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 250 QRRGLKPPP---RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred ccCCCCCCC---CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 000000000 01111222334555566888764 56899999999999877666543
No 485
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=7.4e-09 Score=105.52 Aligned_cols=134 Identities=29% Similarity=0.288 Sum_probs=74.5
Q ss_pred CcEEEEEcCCCCcccccCc-cccCCCCCCCEEEccCCCCCCCCCccc-cCCCCCceEEcccccccC-chhhhhcCCcccc
Q 006055 69 NRVTMLRLPGVALSGQIPL-GILGNLTSLRTLSLRFNSLTSQLPSDL-ASCSNLRNLYLQGNHFSG-EVPLFLVGLHHLV 145 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~-~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 145 (663)
.+|+.|||++|=+..-.|- .+...|++|+.|+|+.|++.-...+.. ..+++|+.|.|+.+.|+- .+-..+..+|+|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 4688888888766522111 345678888888888888764332222 245667777777777662 1223344556666
Q ss_pred ccccccccccccCCCCCcccccccccccccccccCcCC--CCCCCCCCCCEEEeecCcCC
Q 006055 146 RLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIP--GFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 146 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~ 203 (663)
.|+|..|...+.-......+..|+.|||++|++- ..+ ...+.|+.|..|+++.+.++
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcc
Confidence 6666666432233333444555666666666654 222 23445555555555555554
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.56 E-value=6.4e-07 Score=87.18 Aligned_cols=135 Identities=22% Similarity=0.218 Sum_probs=95.2
Q ss_pred HHhhcccccccceEEEEEEecCCcEEEEEEecCc-----------------------ccCHHHHHHHHHHhhcCCCC--C
Q 006055 372 RASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDV-----------------------TISEREFKDKIEGVGAVNHE--N 426 (663)
Q Consensus 372 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~-----------------------~~~~~~~~~e~~~l~~l~h~--n 426 (663)
.+.++.||-|--+.||.|..+.|.++|||.=+.. ..+....++|.+.|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3457899999999999999999999999952110 01123467888889888654 6
Q ss_pred cccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc
Q 006055 427 LVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT 506 (663)
Q Consensus 427 iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~ 506 (663)
+.+.+++ +...+||||+++-.|...-- +-...-.|+..|++-+...-..| |+|+|+.+-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~----------~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL----------DVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC----------cccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEe
Confidence 6666654 57789999999866654431 11122223333444444444566 99999999999999
Q ss_pred CCCceEEecccccccc
Q 006055 507 KSYEARVSDFGLAHLV 522 (663)
Q Consensus 507 ~~~~~kl~Dfg~a~~~ 522 (663)
+||.+.++||--+...
T Consensus 237 ~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 237 EDGDIVVIDWPQAVPI 252 (304)
T ss_pred cCCCEEEEeCcccccC
Confidence 9999999999766443
No 487
>PRK09902 hypothetical protein; Provisional
Probab=98.50 E-value=3.2e-06 Score=80.53 Aligned_cols=137 Identities=13% Similarity=0.130 Sum_probs=102.2
Q ss_pred cccccceEEEEEEecCCcEEEEEEecCc-------ccCHHHHHHHHHHhhcCCCC--CcccceEEEEec-----CccEEE
Q 006055 378 LGKGTFGTAYKAVLEMGTIVAVKRLKDV-------TISEREFKDKIEGVGAVNHE--NLVPLRAYYYSM-----DEKLLV 443 (663)
Q Consensus 378 lg~G~~g~Vy~~~~~~g~~vavK~l~~~-------~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~-----~~~~lv 443 (663)
-|+||-+.|++.... |..+-+|+-... ......|.+|+..+..+... .+.+.+ ++... -.-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367899999998776 557999986521 23467899999999888533 244444 33211 135799
Q ss_pred EEccCC-CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc--eEEecccccc
Q 006055 444 YDYLTM-GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE--ARVSDFGLAH 520 (663)
Q Consensus 444 ~ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~--~kl~Dfg~a~ 520 (663)
+|-+++ -+|.+++.... ..+.+...+..+..+++..+.-||+.| +.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997653 48888886432 234677888899999999999999999 999999999999986666 9999998765
Q ss_pred c
Q 006055 521 L 521 (663)
Q Consensus 521 ~ 521 (663)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 4
No 488
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=3.6e-08 Score=100.64 Aligned_cols=134 Identities=25% Similarity=0.268 Sum_probs=86.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCC-CCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQ-LPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|+.|.+.-......-..+++|+.|.|+.+.|+-. +-..+..+++|+.|+|..|..-+.-.....-+..|+.|
T Consensus 172 p~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~L 251 (505)
T KOG3207|consen 172 PSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQEL 251 (505)
T ss_pred ccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhc
Confidence 57778888888776444433344677788888888877621 11223456778888888875222333334456677888
Q ss_pred ccccccccccCC--CCCcccccccccccccccccC-cCCCC-----CCCCCCCCEEEeecCcCC
Q 006055 148 NLATNNFSGEIP--SGFKNLTKLKTLFLENNRLSG-SIPGF-----DDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 148 ~l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~-~~p~~-----~~~l~~L~~L~l~~N~l~ 203 (663)
||++|++. ..+ ...+.++.|+.|+++.+.+.. .+|+. ...+++|++|+++.|++.
T Consensus 252 dLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 252 DLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred cccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 88888776 333 456777788888888887763 23333 356778888888888775
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.48 E-value=4.2e-08 Score=106.15 Aligned_cols=144 Identities=18% Similarity=0.256 Sum_probs=97.4
Q ss_pred HHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC-------------CCCccccCccccCCCC
Q 006055 478 GAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP-------------NRVAGYRAPEVTDPCK 544 (663)
Q Consensus 478 ~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~y~aPE~~~~~~ 544 (663)
+++.|+.|+|..- ++||++|.|++|.++..+..||+.|+++......... .....|.|||++.+..
T Consensus 107 ~v~dgl~flh~sA-k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRSA-KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccCc-ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 4558999999873 6999999999999999999999999988655442111 1223499999999988
Q ss_pred CCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCC
Q 006055 545 VSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQ 623 (663)
Q Consensus 545 ~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~ 623 (663)
.+.++|+||+||++|.+.. |+.-+....... ....... ..+. .......+.+.++.+=+.+.+..
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~---~~~~~~~---------~~~~--~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLL---SYSFSRN---------LLNA--GAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcc---hhhhhhc---------cccc--ccccccccCcHHHHHHHHHHhcC
Confidence 8999999999999999984 554443321110 0000000 0000 01111233345666667788999
Q ss_pred CCCCCCCHHHHHH
Q 006055 624 YPDNRPSMSEVIK 636 (663)
Q Consensus 624 dP~~RPt~~ev~~ 636 (663)
++.-||++.++..
T Consensus 252 ~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 252 DSAVRPTLDLLLS 264 (700)
T ss_pred CcccCcchhhhhc
Confidence 9999998776654
No 490
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.46 E-value=1.8e-07 Score=65.55 Aligned_cols=37 Identities=41% Similarity=0.909 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHhcCC-C---CcCCcCCC-CCCCccceeEec
Q 006055 31 SSDRAALLALRSSVGG-R---TLLWNVYE-ASPCKWAGVECE 67 (663)
Q Consensus 31 ~~d~~all~~~~~~~~-~---~~~w~~~~-~~~c~w~gv~c~ 67 (663)
+.|++||++||+++.. . +.+|+... .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5799999999999984 2 45798763 789999999995
No 491
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.44 E-value=2.3e-08 Score=86.28 Aligned_cols=113 Identities=22% Similarity=0.246 Sum_probs=95.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.++|++|.+. .+|+.+-..++.++.|+|++|.|+. +|.++..++.|+.|+++.|.|. ..|..+..|.+|-.|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neisd-vPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEISD-VPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhhh-chHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 47899999999999 8998777788899999999999987 8999999999999999999999 7888888899999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGF 185 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 185 (663)
..+|.+. .+|-.+---+++-..++.++.+.+.-|.-
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 9999987 66655433344455667888888766643
No 492
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.44 E-value=7.7e-07 Score=96.85 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcc---------------------------cCH--------------HHHHH
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT---------------------------ISE--------------REFKD 414 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~---------------------------~~~--------------~~~~~ 414 (663)
+.|+.++-|.||+|++++|+.||||+....- ... -++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6788999999999999999999999864210 110 11333
Q ss_pred HHHHhhcC----C-CCCcccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHH-HHHHhh
Q 006055 415 KIEGVGAV----N-HENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARG-IEYLHA 488 (663)
Q Consensus 415 e~~~l~~l----~-h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~a-l~~LH~ 488 (663)
|...+.++ + .+++.--.=|+.-.....|+|||++|..+.+...-.. ...+ +..++..++++ +..+=.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d---~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS----AGID---RKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh----cCCC---HHHHHHHHHHHHHHHHHh
Confidence 44433333 2 2332222222233467899999999999988742211 1234 23334433333 222323
Q ss_pred cCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 489 QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 489 ~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
.| +.|.|..|.||+++.++.+.+.|||+.....+.
T Consensus 284 dg--ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 284 DG--FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred cC--ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 45 999999999999999999999999998776553
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=4.1e-09 Score=113.18 Aligned_cols=127 Identities=31% Similarity=0.393 Sum_probs=79.5
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCC-CCccccccccccc
Q 006055 95 SLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPS-GFKNLTKLKTLFL 173 (663)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l 173 (663)
.|.+.+.++|.|.- ...++.-++.|+.|||++|+++. +. .+..|++|++|||+.|.+. .+|. ....+. |+.|.|
T Consensus 165 ~L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 46666777777754 45566777777777777777773 32 5677777777777777776 4443 223343 777777
Q ss_pred ccccccCcCCCCCCCCCCCCEEEeecCcCCCCC---C-cccccCCCCCccCCcCCCCCC
Q 006055 174 ENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI---P-KRFQTFGSNSFLGNSLCGKPL 228 (663)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~---p-~~~~~~~~~~~~~~~l~~~p~ 228 (663)
+||.++.. -+ +.+|.+|+.|||++|-|.+-- | ..+..+..+.+.||++|..|+
T Consensus 240 rnN~l~tL-~g-ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 240 RNNALTTL-RG-IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred cccHHHhh-hh-HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 77777632 22 457777777777777776422 1 122333444456677776665
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.41 E-value=3.2e-06 Score=82.09 Aligned_cols=108 Identities=21% Similarity=0.211 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhhcCCCC--CcccceEEEEecC----ccEEEEEccCCC-ChhHhhccCCCCCCCCCCHHHHHHHHHHHHH
Q 006055 409 EREFKDKIEGVGAVNHE--NLVPLRAYYYSMD----EKLLVYDYLTMG-SLSALLHGNKGAGRTPLNWEMRSLIALGAAR 481 (663)
Q Consensus 409 ~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~----~~~lv~ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 481 (663)
.....+|...+..+... ...+.+++..... ..++|+|++++. +|.+++.... ..+...+..++.+++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHH
Confidence 44577888877777443 3445666665432 347999999874 7999887532 1455677889999999
Q ss_pred HHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccccC
Q 006055 482 GIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHLVG 523 (663)
Q Consensus 482 al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~ 523 (663)
.+.-||..| |+|+|+++.|||++.+. .+.++||+-++...
T Consensus 130 ~i~~lH~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 130 LIAKLHDAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHCc--CCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 999999999 99999999999999887 89999999887654
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.37 E-value=3.3e-09 Score=113.85 Aligned_cols=126 Identities=29% Similarity=0.264 Sum_probs=91.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhh-hcCCccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLF-LVGLHHLVRLN 148 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ 148 (663)
.+...+.+.|.|. .+.. .+.-++.|+.|||++|+++..- .+..|++|++|||+.|+|. .+|.. -..+ +|+.|.
T Consensus 165 ~L~~a~fsyN~L~-~mD~-SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDE-SLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHH-HHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 3445556667776 4443 5677888899999999988643 6888889999999999988 55532 2233 488889
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCC-CCCCCCCCCCEEEeecCcCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 203 (663)
|++|.++.. ..+.+|++|+.|||++|-|++.-. ..+..|..|+.|+|.+|++.
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 999988743 357788888999999998875322 22556778888888888886
No 496
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.34 E-value=7.1e-06 Score=80.76 Aligned_cols=137 Identities=14% Similarity=0.143 Sum_probs=85.4
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCc--ccceEEEEecCccEEEEEccCCCC-h
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENL--VPLRAYYYSMDEKLLVYDYLTMGS-L 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~~~~~lv~ey~~~gs-L 452 (663)
..||+|..+.||+. .|..+++|..... .......+|.+++..+..-.+ .+.+++....+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~-~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPG-FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 57999999999983 2556788887643 345567889999988864433 566777766777789999999863 2
Q ss_pred hHh---------------------hccCCCCCCCCCCHHHHHH-HHH----------HHH-HHHHHHhhc--CCcceecC
Q 006055 453 SAL---------------------LHGNKGAGRTPLNWEMRSL-IAL----------GAA-RGIEYLHAQ--GPNVSHGN 497 (663)
Q Consensus 453 ~~~---------------------l~~~~~~~~~~l~~~~~~~-i~~----------~ia-~al~~LH~~--~~~iiHrd 497 (663)
... +|.-.. .. .....+.. +.. .+. ....+|... .+.++|+|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DT--STFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CC--CcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 111 222110 01 11111000 000 011 112333222 24578999
Q ss_pred CCCCCEEEcCCCceEEecccccc
Q 006055 498 IKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 498 lk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+.|.||++++++ +.++||+.+.
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcC
Confidence 999999999888 9999999874
No 497
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.24 E-value=1.9e-05 Score=76.30 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=90.4
Q ss_pred ccccccceEEEEEEecCCcEEEEEEecCcccC--------------------HH-----HHHHHHHHhhcCC--CCCccc
Q 006055 377 VLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS--------------------ER-----EFKDKIEGVGAVN--HENLVP 429 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--------------------~~-----~~~~e~~~l~~l~--h~niv~ 429 (663)
.|.+|.-+.||+|...++..+|||+++..... .+ -..+|..-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 68889999999999888999999998643111 01 1234444455442 233334
Q ss_pred ceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCC
Q 006055 430 LRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKS 508 (663)
Q Consensus 430 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~ 508 (663)
-+++. +..|||||+..... ..+.....++.......+..++++.+.-|-. .+ ++|+||..-|||+. +
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~-----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGL-----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNILVH-D 202 (268)
T ss_pred ceeec----CCeEEEEeccCCCC-----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC--cccccchhhheEEE-C
Confidence 44443 56799999875411 1111122233333566677778888888776 45 99999999999999 8
Q ss_pred CceEEeccccccccC
Q 006055 509 YEARVSDFGLAHLVG 523 (663)
Q Consensus 509 ~~~kl~Dfg~a~~~~ 523 (663)
+.+.|+|||-|....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 899999999887654
No 498
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.23 E-value=2e-07 Score=100.77 Aligned_cols=125 Identities=30% Similarity=0.289 Sum_probs=74.8
Q ss_pred EEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccc
Q 006055 71 VTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 71 v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (663)
+..++|..|.+. .+- +.++.+++|..|+|..|+|.+ +...+..+++|++|+|++|.|+...+ +..++.|+.|+++
T Consensus 74 l~~l~l~~n~i~-~~~-~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 74 LKELNLRQNLIA-KIL-NHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred HHhhccchhhhh-hhh-cccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 444555556555 211 124666777777777777765 23236666777777777777764333 4455667777777
Q ss_pred cccccccCCCCCcccccccccccccccccCcCCCC-CCCCCCCCEEEeecCcCC
Q 006055 151 TNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGF-DDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~ 203 (663)
+|.|+.. ..+..+++|+.+++++|+++..-+ . ...+.+|+.+++.+|.+.
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIR 199 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchh
Confidence 7777622 345556777777777777763333 1 356666777777777665
No 499
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.10 E-value=1.8e-06 Score=100.13 Aligned_cols=128 Identities=33% Similarity=0.326 Sum_probs=84.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCC--CCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNS--LTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+....+-+|.+. .++.. ...++|++|-+..|. +....+..|..++.|+.|||++|.=-+.+|..+++|-+|++|
T Consensus 524 ~~rr~s~~~~~~~-~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred heeEEEEeccchh-hccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4455555556554 44432 234467777777775 443333446667777777777766555777777777777777
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCc
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNL 201 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 201 (663)
+|+...++ .+|..+++|+.|.+|++..+.-...+|.....+.+|++|.+-.-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 77777777 677777777777777777776554556666667777777765443
No 500
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.05 E-value=9.3e-07 Score=95.65 Aligned_cols=126 Identities=27% Similarity=0.331 Sum_probs=94.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|.+|+|. .+.. .+..+++|++|+|++|.|+...+ +..++.|+.|++++|.++ .++ .+..+.+|+.++
T Consensus 95 ~~l~~l~l~~n~i~-~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 95 KSLEALDLYDNKIE-KIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLD 168 (414)
T ss_pred cceeeeeccccchh-hccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcch-hcc-CCccchhhhccc
Confidence 57899999999999 4543 26789999999999999987543 778888999999999998 333 356689999999
Q ss_pred cccccccccCCCC-CcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 149 LATNNFSGEIPSG-FKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 149 l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+++|++...-+ . ...+.+|+.+++.+|.+.-... +..+..+..+++..|.++
T Consensus 169 l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 169 LSYNRIVDIEN-DELSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred CCcchhhhhhh-hhhhhccchHHHhccCCchhcccc--hHHHHHHHHhhcccccce
Confidence 99999984433 2 5788899999999998872221 223333444455555554
Done!