Query 006055
Match_columns 663
No_of_seqs 717 out of 5221
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:46:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.2E-52 1.1E-56 432.5 21.8 251 375-644 46-320 (329)
2 4gt4_A Tyrosine-protein kinase 100.0 2.7E-52 9.1E-57 429.0 19.6 248 375-641 31-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-52 5.7E-57 428.7 17.3 251 375-644 18-290 (299)
4 3omv_A RAF proto-oncogene seri 100.0 5.8E-51 2E-55 417.3 23.6 250 375-645 41-302 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2E-51 7E-56 423.3 15.5 258 375-644 8-298 (303)
6 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-50 4.4E-55 418.7 18.4 247 375-647 63-320 (336)
7 3fpq_A Serine/threonine-protei 100.0 5.5E-50 1.9E-54 407.1 22.3 241 376-637 32-283 (290)
8 4b9d_A Serine/threonine-protei 100.0 4.5E-50 1.5E-54 416.5 19.0 241 375-637 29-277 (350)
9 4fih_A Serine/threonine-protei 100.0 8.5E-50 2.9E-54 413.8 21.0 239 376-637 80-324 (346)
10 4ase_A Vascular endothelial gr 100.0 1.2E-49 4E-54 416.5 15.4 252 375-644 69-348 (353)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.5E-49 8.4E-54 404.2 15.5 237 375-636 37-284 (311)
12 4fie_A Serine/threonine-protei 100.0 1.5E-48 5E-53 414.3 21.7 240 375-637 156-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.4E-48 4.8E-53 393.2 20.0 237 375-637 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-48 4.4E-53 399.0 13.9 237 375-636 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 7.3E-47 2.5E-51 387.5 18.4 240 375-637 10-280 (299)
16 4b99_A Mitogen-activated prote 100.0 2.9E-44 1E-48 382.2 23.1 249 375-637 59-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.6E-43 5.4E-48 372.6 22.8 185 375-570 26-249 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.2E-42 4.3E-47 362.2 24.6 265 375-643 44-315 (321)
19 3v5w_A G-protein coupled recep 100.0 3.2E-43 1.1E-47 389.6 19.8 241 375-637 194-450 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 7.5E-43 2.6E-47 389.4 18.8 243 375-637 162-411 (573)
21 3uim_A Brassinosteroid insensi 100.0 1.6E-42 5.5E-47 362.1 20.1 277 363-643 18-311 (326)
22 3soc_A Activin receptor type-2 100.0 2.2E-42 7.4E-47 360.5 19.2 255 375-643 29-318 (322)
23 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-41 6.5E-46 351.4 21.5 249 375-644 15-283 (310)
24 3p86_A Serine/threonine-protei 100.0 3.8E-41 1.3E-45 348.9 22.4 252 375-645 42-300 (309)
25 4hcu_A Tyrosine-protein kinase 100.0 3E-41 1E-45 342.4 21.1 247 375-644 15-267 (269)
26 3fxz_A Serine/threonine-protei 100.0 1.4E-41 4.6E-46 350.3 17.2 240 375-637 25-270 (297)
27 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.5E-41 1.5E-45 340.9 20.0 248 375-645 13-266 (268)
28 2psq_A Fibroblast growth facto 100.0 6.1E-41 2.1E-45 356.2 21.3 250 375-643 86-364 (370)
29 1qcf_A Haematopoetic cell kina 100.0 5.7E-41 1.9E-45 366.4 21.6 249 375-646 193-447 (454)
30 2c30_A Serine/threonine-protei 100.0 4.8E-40 1.7E-44 342.5 26.8 251 364-637 24-295 (321)
31 3gen_A Tyrosine-protein kinase 100.0 1.4E-40 4.8E-45 340.0 20.4 246 375-643 29-280 (283)
32 3q4u_A Activin receptor type-1 100.0 6.4E-41 2.2E-45 345.6 18.1 250 375-641 13-300 (301)
33 3fe3_A MAP/microtubule affinit 100.0 9.6E-41 3.3E-45 348.5 19.5 238 375-637 20-265 (328)
34 2nru_A Interleukin-1 receptor- 100.0 8E-40 2.7E-44 338.5 26.1 272 362-643 12-306 (307)
35 3kul_A Ephrin type-A receptor 100.0 8.5E-41 2.9E-45 348.9 18.9 248 375-645 54-315 (325)
36 3zgw_A Maternal embryonic leuc 100.0 9.8E-41 3.4E-45 350.5 18.2 239 375-638 15-262 (347)
37 4eqm_A Protein kinase; transfe 100.0 2.5E-40 8.6E-45 340.3 20.7 259 375-653 16-285 (294)
38 4euu_A Serine/threonine-protei 100.0 7.2E-40 2.5E-44 341.0 24.4 270 375-650 14-316 (319)
39 1tki_A Titin; serine kinase, m 100.0 2.2E-40 7.6E-45 344.9 18.7 244 375-638 10-259 (321)
40 1opk_A P150, C-ABL, proto-onco 100.0 2E-40 6.7E-45 365.7 19.3 248 375-644 225-479 (495)
41 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-40 7.9E-45 361.2 19.4 249 375-646 189-443 (452)
42 3kmu_A ILK, integrin-linked ki 100.0 6.1E-40 2.1E-44 332.7 21.1 248 375-643 15-270 (271)
43 1o6l_A RAC-beta serine/threoni 100.0 7.5E-40 2.6E-44 342.7 22.2 238 375-637 10-261 (337)
44 2yab_A Death-associated protei 100.0 8.6E-40 2.9E-44 345.4 22.6 241 375-636 17-272 (361)
45 3t9t_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 332.4 20.3 247 375-644 13-265 (267)
46 2qol_A Ephrin receptor; recept 100.0 2E-40 7E-45 352.4 17.6 247 375-644 50-310 (373)
47 3cbl_A C-FES, proto-oncogene t 100.0 9E-41 3.1E-45 356.0 14.8 246 375-643 119-374 (377)
48 3mdy_A Bone morphogenetic prot 100.0 5.7E-40 1.9E-44 344.2 20.5 254 375-645 42-333 (337)
49 1k9a_A Carboxyl-terminal SRC k 100.0 3.5E-40 1.2E-44 359.6 19.5 246 375-644 198-446 (450)
50 3dtc_A Mitogen-activated prote 100.0 4.3E-40 1.5E-44 334.1 18.9 244 375-641 12-271 (271)
51 2izr_A Casein kinase I isoform 100.0 5.2E-40 1.8E-44 343.7 19.7 252 375-645 14-283 (330)
52 3ugc_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 340.8 16.2 254 375-644 15-292 (295)
53 1luf_A Muscle-specific tyrosin 100.0 4.2E-40 1.4E-44 346.1 18.7 253 375-646 52-338 (343)
54 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-40 9.3E-45 350.9 17.2 251 375-644 76-346 (367)
55 3tt0_A Basic fibroblast growth 100.0 1.3E-39 4.6E-44 347.6 22.4 251 375-644 74-353 (382)
56 4f0f_A Serine/threonine-protei 100.0 1.6E-39 5.3E-44 333.0 22.0 247 375-641 24-287 (287)
57 4fvq_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 337.9 16.9 251 375-649 13-281 (289)
58 2y0a_A Death-associated protei 100.0 1.8E-39 6.2E-44 338.9 22.2 242 375-637 16-272 (326)
59 2zv2_A Calcium/calmodulin-depe 100.0 1E-39 3.5E-44 336.4 20.1 239 375-637 18-293 (298)
60 3niz_A Rhodanese family protei 100.0 1.6E-39 5.5E-44 337.0 21.2 253 375-637 26-301 (311)
61 1csn_A Casein kinase-1; phosph 100.0 8.7E-40 3E-44 336.6 18.4 262 375-654 15-294 (298)
62 3kn6_A Ribosomal protein S6 ki 100.0 6.1E-40 2.1E-44 342.3 17.4 245 376-637 17-271 (325)
63 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-39 7.1E-44 336.8 21.0 238 375-637 11-259 (318)
64 3poz_A Epidermal growth factor 100.0 6.3E-40 2.1E-44 342.6 17.2 245 375-643 20-278 (327)
65 3vhe_A Vascular endothelial gr 100.0 4E-40 1.4E-44 348.7 15.8 251 375-643 27-355 (359)
66 2x4f_A Myosin light chain kina 100.0 1.1E-39 3.7E-44 346.7 19.0 242 376-637 95-343 (373)
67 2eva_A TAK1 kinase - TAB1 chim 100.0 2.5E-39 8.5E-44 335.0 21.2 250 375-647 13-267 (307)
68 3op5_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 344.5 20.5 261 375-649 40-335 (364)
69 3tki_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 343.6 14.7 241 375-637 12-262 (323)
70 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-39 3.6E-44 363.1 19.3 249 375-646 272-526 (535)
71 3uc3_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44 345.2 18.3 244 375-637 25-275 (361)
72 4dc2_A Protein kinase C IOTA t 100.0 2E-39 6.7E-44 346.0 20.2 245 375-637 57-319 (396)
73 2bdw_A Hypothetical protein K1 100.0 3.4E-39 1.2E-43 341.5 21.9 242 375-637 34-285 (362)
74 3qd2_B Eukaryotic translation 100.0 3.3E-39 1.1E-43 337.4 21.5 240 375-637 11-326 (332)
75 3soa_A Calcium/calmodulin-depe 100.0 4E-39 1.4E-43 349.3 22.8 242 375-637 16-268 (444)
76 3c0i_A Peripheral plasma membr 100.0 1.8E-39 6.3E-44 342.4 19.4 245 375-637 29-287 (351)
77 3c1x_A Hepatocyte growth facto 100.0 1.9E-39 6.6E-44 344.6 19.5 255 375-652 94-364 (373)
78 3g2f_A Bone morphogenetic prot 100.0 1.8E-39 6.2E-44 340.4 18.9 265 375-651 18-326 (336)
79 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.8E-40 2.7E-44 344.8 16.0 238 375-637 28-281 (353)
80 1qpc_A LCK kinase; alpha beta 100.0 2.2E-39 7.4E-44 330.5 18.7 247 375-644 18-270 (279)
81 3lb7_A RAF proto-oncogene seri 100.0 9.6E-39 3.3E-43 330.5 23.7 251 375-646 41-303 (307)
82 3qup_A Tyrosine-protein kinase 100.0 1.6E-39 5.6E-44 338.8 18.0 252 375-645 28-300 (323)
83 1u5q_A Serine/threonine protei 100.0 2.3E-39 8E-44 340.9 19.3 243 375-640 59-309 (348)
84 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.2E-39 1.1E-43 339.9 20.2 238 375-637 46-294 (350)
85 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-39 4.4E-44 337.9 17.0 251 375-644 28-312 (314)
86 1rjb_A FL cytokine receptor; k 100.0 1.7E-39 5.7E-44 341.9 18.1 255 375-647 50-338 (344)
87 3kfa_A Tyrosine-protein kinase 100.0 1.4E-39 4.6E-44 333.5 16.8 247 375-643 18-271 (288)
88 4fr4_A YANK1, serine/threonine 100.0 4.8E-39 1.7E-43 341.7 21.5 240 375-636 20-271 (384)
89 1ob3_A PFPK5, cell division co 100.0 5.2E-39 1.8E-43 329.4 20.7 250 375-637 7-281 (288)
90 1mp8_A Focal adhesion kinase 1 100.0 2.4E-39 8.1E-44 330.7 17.8 245 375-643 20-276 (281)
91 3pls_A Macrophage-stimulating 100.0 6.4E-39 2.2E-43 330.1 21.1 253 375-649 26-293 (298)
92 1xjd_A Protein kinase C, theta 100.0 1.7E-39 5.9E-44 340.9 16.8 237 375-636 22-269 (345)
93 3v8s_A RHO-associated protein 100.0 1.1E-39 3.7E-44 349.8 15.6 242 375-638 74-331 (410)
94 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-39 9E-44 338.3 17.9 238 375-638 14-260 (336)
95 1kob_A Twitchin; kinase, intra 100.0 4.2E-39 1.4E-43 343.3 19.7 243 375-637 56-305 (387)
96 3a8x_A Protein kinase C IOTA t 100.0 4.8E-39 1.6E-43 338.0 19.9 245 375-637 14-276 (345)
97 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-39 9E-44 335.5 17.6 252 375-644 28-308 (313)
98 2pvf_A Fibroblast growth facto 100.0 2.6E-39 9E-44 339.0 17.7 253 375-646 40-321 (334)
99 2ozo_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 363.8 20.3 244 377-644 343-599 (613)
100 3o0g_A Cell division protein k 100.0 7.8E-39 2.7E-43 328.8 20.8 251 375-637 7-283 (292)
101 4e5w_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 332.6 18.0 252 375-642 26-301 (302)
102 3lxl_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 339.3 15.5 260 375-650 28-310 (327)
103 3a62_A Ribosomal protein S6 ki 100.0 7.3E-39 2.5E-43 334.5 20.3 238 375-637 22-277 (327)
104 3kex_A Receptor tyrosine-prote 100.0 3.8E-39 1.3E-43 336.4 17.9 245 375-643 18-276 (325)
105 1u59_A Tyrosine-protein kinase 100.0 7.1E-39 2.4E-43 328.2 19.6 246 376-645 16-274 (287)
106 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-38 3.9E-43 327.9 21.1 262 375-654 14-291 (296)
107 1nxk_A MAP kinase-activated pr 100.0 6.7E-39 2.3E-43 343.9 19.9 244 376-638 68-323 (400)
108 2w4o_A Calcium/calmodulin-depe 100.0 5.8E-39 2E-43 338.2 19.1 241 375-636 58-305 (349)
109 3gni_B Strad alpha; kinase fol 100.0 1.2E-38 4.1E-43 341.3 21.7 260 375-641 30-340 (389)
110 2i0e_A Protein kinase C-beta I 100.0 7.5E-39 2.6E-43 337.2 19.4 238 375-637 25-277 (353)
111 4fl3_A Tyrosine-protein kinase 100.0 5.4E-39 1.9E-43 363.5 19.4 242 376-642 375-630 (635)
112 3gxj_A TGF-beta receptor type- 100.0 7.1E-41 2.4E-45 345.5 3.6 254 375-645 8-299 (303)
113 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-38 3.6E-43 331.8 19.9 254 375-637 10-294 (317)
114 2a19_B Interferon-induced, dou 100.0 1.3E-38 4.4E-43 325.3 20.1 243 375-647 16-278 (284)
115 3llt_A Serine/threonine kinase 100.0 1.3E-38 4.4E-43 337.3 20.5 191 375-571 40-262 (360)
116 4hgt_A Casein kinase I isoform 100.0 1.2E-38 4E-43 327.7 19.5 261 375-653 14-290 (296)
117 3p1a_A MYT1 kinase, membrane-a 100.0 3.2E-38 1.1E-42 327.3 22.7 236 375-637 62-305 (311)
118 3lxp_A Non-receptor tyrosine-p 100.0 3.5E-39 1.2E-43 335.6 15.5 252 375-644 36-311 (318)
119 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-38 6.3E-43 325.5 20.6 248 375-643 29-288 (289)
120 2y94_A 5'-AMP-activated protei 100.0 1.3E-38 4.4E-43 347.6 20.6 238 375-637 21-267 (476)
121 1b6c_B TGF-B superfamily recep 100.0 6.4E-39 2.2E-43 337.0 17.5 254 375-645 47-338 (342)
122 4ejn_A RAC-alpha serine/threon 100.0 7E-39 2.4E-43 349.2 18.3 238 375-637 153-405 (446)
123 3ork_A Serine/threonine protei 100.0 8.6E-39 3E-43 331.6 18.1 249 375-644 17-282 (311)
124 3fdn_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 324.9 19.0 239 375-638 14-259 (279)
125 1mqb_A Ephrin type-A receptor 100.0 2.6E-38 9.1E-43 331.2 21.9 247 375-644 49-310 (333)
126 2v62_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 337.1 17.8 255 375-644 42-329 (345)
127 2a2a_A Death-associated protei 100.0 2.7E-38 9.2E-43 329.4 21.8 242 375-637 17-273 (321)
128 2eue_A Carbon catabolite derep 100.0 1.3E-38 4.4E-43 324.1 18.7 236 376-637 19-263 (275)
129 3brb_A Proto-oncogene tyrosine 100.0 1.3E-38 4.6E-43 330.4 19.2 252 375-645 39-310 (313)
130 3dls_A PAS domain-containing s 100.0 4.9E-39 1.7E-43 336.9 16.0 232 375-637 29-275 (335)
131 4aw2_A Serine/threonine-protei 100.0 4.5E-39 1.6E-43 347.6 16.1 244 375-637 79-339 (437)
132 3oz6_A Mitogen-activated prote 100.0 2.6E-38 8.8E-43 338.5 21.8 248 375-637 14-329 (388)
133 3f66_A Hepatocyte growth facto 100.0 1.2E-38 4.3E-43 328.1 18.6 249 375-646 30-294 (298)
134 2wqm_A Serine/threonine-protei 100.0 1.2E-38 4.3E-43 330.1 18.8 256 375-647 37-301 (310)
135 3lzb_A Epidermal growth factor 100.0 1.1E-38 3.9E-43 333.0 18.3 246 375-644 20-279 (327)
136 1fvr_A Tyrosine-protein kinase 100.0 2.8E-38 9.4E-43 330.2 21.1 254 375-647 30-304 (327)
137 4eut_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 341.7 19.0 264 375-644 14-310 (396)
138 3g33_A Cell division protein k 100.0 5.8E-39 2E-43 332.3 15.5 250 375-636 14-296 (308)
139 2h34_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 325.7 22.3 251 375-647 39-300 (309)
140 3is5_A Calcium-dependent prote 100.0 2.5E-38 8.5E-43 323.9 19.9 244 375-637 27-279 (285)
141 3f3z_A Calcium/calmodulin-depe 100.0 4.8E-38 1.6E-42 320.2 21.9 241 375-637 14-262 (277)
142 2buj_A Serine/threonine-protei 100.0 8.3E-39 2.9E-43 332.5 16.5 256 375-648 34-311 (317)
143 1xbb_A Tyrosine-protein kinase 100.0 2E-38 6.8E-43 325.6 19.1 246 377-647 24-283 (291)
144 2acx_A G protein-coupled recep 100.0 1.5E-38 5E-43 351.9 19.3 244 375-637 189-445 (576)
145 1t4h_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 321.1 23.2 241 376-637 32-283 (290)
146 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-38 5.5E-43 337.2 18.4 244 375-644 70-340 (365)
147 2r5t_A Serine/threonine-protei 100.0 1.5E-38 5E-43 337.3 18.0 236 375-635 43-288 (373)
148 1p4o_A Insulin-like growth fac 100.0 2.6E-38 9E-43 329.5 19.6 251 375-644 30-300 (322)
149 3kk8_A Calcium/calmodulin depe 100.0 4.5E-38 1.5E-42 321.5 20.7 242 375-637 11-262 (284)
150 3ttj_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 344.0 21.6 247 375-637 67-356 (464)
151 3cok_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 325.1 16.0 238 375-636 16-262 (278)
152 1byg_A CSK, protein (C-termina 100.0 7.6E-39 2.6E-43 326.3 14.8 245 375-643 26-273 (278)
153 2jii_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 336.4 16.9 265 375-656 47-349 (352)
154 3dbq_A Dual specificity protei 100.0 1.8E-38 6E-43 333.9 17.9 240 375-638 14-275 (343)
155 2ac3_A MAP kinase-interacting 100.0 2.5E-38 8.6E-43 328.7 18.9 247 376-637 19-296 (316)
156 3hko_A Calcium/calmodulin-depe 100.0 2.2E-38 7.5E-43 333.4 18.4 247 375-637 31-331 (345)
157 3cc6_A Protein tyrosine kinase 100.0 2E-38 7E-43 323.7 17.5 245 375-643 17-273 (281)
158 1cm8_A Phosphorylated MAP kina 100.0 6.6E-38 2.2E-42 332.4 21.9 253 375-642 30-315 (367)
159 2xir_A Vascular endothelial gr 100.0 1.4E-38 5E-43 330.3 16.4 251 375-643 32-310 (316)
160 4agu_A Cyclin-dependent kinase 100.0 5.6E-38 1.9E-42 325.3 20.7 253 375-637 8-285 (311)
161 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.3E-38 1.5E-42 347.3 21.0 244 376-636 191-448 (543)
162 3byv_A Rhoptry kinase; malaria 100.0 7.1E-40 2.4E-44 349.2 6.5 237 375-637 78-360 (377)
163 3ll6_A Cyclin G-associated kin 100.0 6.4E-39 2.2E-43 336.0 13.3 248 375-645 33-310 (337)
164 1wak_A Serine/threonine-protei 100.0 2.9E-38 1E-42 338.8 18.6 257 375-637 42-392 (397)
165 2zmd_A Dual specificity protei 100.0 4E-38 1.4E-42 336.8 19.5 240 375-638 61-322 (390)
166 2yex_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 320.3 18.6 241 375-637 12-262 (276)
167 2vd5_A DMPK protein; serine/th 100.0 1.5E-38 5.3E-43 341.1 16.2 243 375-637 66-328 (412)
168 2i1m_A Macrophage colony-stimu 100.0 6.1E-39 2.1E-43 336.0 12.7 251 375-643 51-326 (333)
169 2owb_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 330.7 18.2 238 375-637 46-292 (335)
170 3bhy_A Death-associated protei 100.0 7.7E-38 2.6E-42 319.6 20.2 247 375-642 10-273 (283)
171 3lm5_A Serine/threonine-protei 100.0 6E-38 2E-42 327.6 19.6 243 376-637 35-288 (327)
172 3eqc_A Dual specificity mitoge 100.0 2.7E-38 9.1E-43 334.9 16.8 189 375-570 38-232 (360)
173 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.9E-42 318.8 20.9 240 375-637 16-280 (289)
174 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-37 5.2E-42 320.8 22.0 239 375-638 27-272 (303)
175 2vgo_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 320.1 19.4 238 375-637 19-263 (284)
176 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-38 7.6E-43 332.5 15.9 243 375-638 27-279 (342)
177 3kvw_A DYRK2, dual specificity 100.0 5.5E-38 1.9E-42 339.9 19.4 191 375-571 102-302 (429)
178 3i6u_A CDS1, serine/threonine- 100.0 5.3E-38 1.8E-42 339.1 19.2 242 375-637 140-400 (419)
179 2jam_A Calcium/calmodulin-depe 100.0 8.3E-38 2.9E-42 323.0 19.7 242 375-637 14-262 (304)
180 2w1i_A JAK2; chromosomal rearr 100.0 3.6E-38 1.2E-42 329.2 17.0 253 375-643 46-322 (326)
181 3q60_A ROP5B; pseudokinase, tr 100.0 5.3E-39 1.8E-43 341.7 10.7 246 375-637 67-353 (371)
182 2yfx_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42 328.5 17.4 251 375-644 35-305 (327)
183 2rku_A Serine/threonine-protei 100.0 9.4E-38 3.2E-42 321.0 19.2 239 375-638 20-267 (294)
184 3mwu_A Calmodulin-domain prote 100.0 1.6E-37 5.3E-42 342.4 22.3 241 375-637 27-277 (486)
185 4aaa_A Cyclin-dependent kinase 100.0 5.7E-38 2E-42 328.4 17.7 250 375-637 30-307 (331)
186 2clq_A Mitogen-activated prote 100.0 3.7E-38 1.3E-42 323.9 15.9 243 376-637 28-279 (295)
187 3mtl_A Cell division protein k 100.0 1.2E-38 4.2E-43 332.4 12.4 253 375-637 7-282 (324)
188 2h6d_A 5'-AMP-activated protei 100.0 1.6E-37 5.4E-42 316.1 20.2 238 375-637 16-262 (276)
189 3nsz_A CK II alpha, casein kin 100.0 1.6E-37 5.4E-42 324.7 20.5 246 375-637 41-320 (330)
190 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.5E-38 1.9E-42 328.2 16.8 248 375-636 39-318 (329)
191 3sv0_A Casein kinase I-like; t 100.0 7.9E-38 2.7E-42 342.0 18.7 251 375-643 12-278 (483)
192 3rgf_A Cyclin-dependent kinase 100.0 8.9E-38 3E-42 336.3 18.6 259 375-637 26-334 (405)
193 3rp9_A Mitogen-activated prote 100.0 1.7E-37 6E-42 339.5 21.1 182 375-564 58-280 (458)
194 3nyv_A Calmodulin-domain prote 100.0 1.1E-37 3.7E-42 343.6 19.6 241 375-637 31-282 (484)
195 2y7j_A Phosphorylase B kinase 100.0 2.7E-37 9.1E-42 327.6 21.8 241 376-637 100-360 (365)
196 1vzo_A Ribosomal protein S6 ki 100.0 3.5E-38 1.2E-42 333.2 14.6 243 375-638 59-323 (355)
197 3q5i_A Protein kinase; CDPK, m 100.0 2.8E-37 9.6E-42 341.8 22.3 241 375-637 41-302 (504)
198 3lij_A Calcium/calmodulin depe 100.0 2.3E-37 7.9E-42 341.6 21.3 241 375-637 42-292 (494)
199 2w5a_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 320.5 14.5 246 375-638 11-269 (279)
200 1u46_A ACK-1, activated CDC42 100.0 5.9E-38 2E-42 321.7 15.2 248 375-645 23-286 (291)
201 2fst_X Mitogen-activated prote 100.0 2E-37 6.8E-42 328.5 19.7 248 375-637 34-312 (367)
202 3n9x_A Phosphotransferase; mal 100.0 5.5E-37 1.9E-41 332.6 23.4 187 375-569 31-253 (432)
203 1ua2_A CAK, cell division prot 100.0 1.8E-37 6.1E-42 326.7 18.8 251 375-638 15-293 (346)
204 3fme_A Dual specificity mitoge 100.0 8.3E-38 2.9E-42 320.5 15.6 244 375-637 12-267 (290)
205 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-37 5.9E-42 353.6 19.7 238 375-637 346-598 (674)
206 2vwi_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 324.5 13.5 253 375-637 20-288 (303)
207 3pg1_A Mitogen-activated prote 100.0 2.4E-37 8.4E-42 327.7 19.5 250 375-637 27-317 (362)
208 2r3i_A Cell division protein k 100.0 4.1E-37 1.4E-41 316.8 20.6 250 375-636 8-283 (299)
209 1q8y_A SR protein kinase; tran 100.0 1.7E-37 5.9E-42 330.1 18.3 257 375-637 24-334 (373)
210 2j7t_A Serine/threonine-protei 100.0 2.9E-37 9.9E-42 318.4 19.4 242 375-637 24-276 (302)
211 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-37 6.2E-42 323.7 17.9 242 375-637 29-287 (326)
212 3mi9_A Cell division protein k 100.0 9.3E-38 3.2E-42 329.5 15.8 253 375-637 22-312 (351)
213 3com_A Serine/threonine-protei 100.0 7.4E-37 2.5E-41 317.3 22.2 241 375-637 34-279 (314)
214 2wtk_C Serine/threonine-protei 100.0 8.1E-37 2.8E-41 315.6 22.2 240 375-638 10-265 (305)
215 1z57_A Dual specificity protei 100.0 4.7E-37 1.6E-41 321.9 20.6 254 375-637 19-329 (339)
216 2xrw_A Mitogen-activated prote 100.0 8.8E-37 3E-41 324.5 22.5 248 375-638 30-320 (371)
217 4exu_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 324.9 22.1 247 375-637 47-324 (371)
218 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-37 8.7E-42 325.7 18.0 252 375-637 36-323 (348)
219 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-37 3.9E-42 324.2 14.8 249 375-648 38-307 (319)
220 3an0_A Dual specificity mitoge 100.0 1.6E-37 5.5E-42 326.2 15.9 244 375-637 56-311 (340)
221 3qyz_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 325.4 19.9 251 375-637 32-314 (364)
222 3e3p_A Protein kinase, putativ 100.0 5.5E-37 1.9E-41 324.6 19.5 258 375-642 28-322 (360)
223 3eb0_A Putative uncharacterize 100.0 2.3E-37 7.8E-42 330.5 16.6 250 375-637 12-322 (383)
224 1phk_A Phosphorylase kinase; g 100.0 6E-37 2E-41 315.5 18.8 241 375-636 22-283 (298)
225 1j1b_A Glycogen synthase kinas 100.0 2.6E-37 8.9E-42 333.8 16.6 250 375-637 59-337 (420)
226 2ycf_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 320.9 17.1 242 375-637 15-275 (322)
227 2j0j_A Focal adhesion kinase 1 100.0 6.3E-37 2.2E-41 347.8 20.2 245 375-643 395-651 (656)
228 2vx3_A Dual specificity tyrosi 100.0 1.4E-36 4.9E-41 324.2 21.5 193 375-571 59-261 (382)
229 4e7w_A Glycogen synthase kinas 100.0 4.4E-37 1.5E-41 329.3 17.3 256 375-643 45-330 (394)
230 3fhr_A MAP kinase-activated pr 100.0 3.5E-37 1.2E-41 323.0 15.3 245 376-638 35-289 (336)
231 2rio_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 334.4 15.0 245 375-637 20-296 (434)
232 2i6l_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 316.6 18.0 248 375-637 16-306 (320)
233 1zy4_A Serine/threonine-protei 100.0 9E-37 3.1E-41 314.5 17.0 240 375-636 11-283 (303)
234 3coi_A Mitogen-activated prote 100.0 3.7E-36 1.3E-40 317.5 21.7 247 375-637 29-306 (353)
235 2wei_A Calmodulin-domain prote 100.0 3.1E-36 1.1E-40 308.5 20.4 241 375-637 27-277 (287)
236 2eu9_A Dual specificity protei 100.0 2.4E-36 8.2E-41 318.8 19.7 253 375-637 24-334 (355)
237 1blx_A Cyclin-dependent kinase 100.0 1.9E-36 6.4E-41 316.0 18.6 251 375-637 16-297 (326)
238 2b9h_A MAP kinase FUS3, mitoge 100.0 2.8E-36 9.7E-41 318.3 19.3 248 375-637 16-306 (353)
239 3aln_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 320.4 13.5 248 375-637 27-286 (327)
240 3cek_A Dual specificity protei 100.0 3.4E-36 1.2E-40 312.3 18.6 240 375-638 33-294 (313)
241 3a99_A Proto-oncogene serine/t 100.0 6.1E-37 2.1E-41 319.0 9.9 232 375-637 48-294 (320)
242 3p23_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 325.7 15.7 239 375-637 29-284 (432)
243 2dyl_A Dual specificity mitoge 100.0 6.9E-36 2.4E-40 310.4 16.8 242 375-637 30-284 (318)
244 2iwi_A Serine/threonine-protei 100.0 1.5E-36 5E-41 314.8 11.5 232 375-637 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 2.8E-35 9.6E-40 301.1 17.0 228 375-646 36-268 (286)
246 2pzi_A Probable serine/threoni 100.0 2.5E-35 8.6E-40 337.7 17.8 232 375-641 85-326 (681)
247 3m2w_A MAP kinase-activated pr 100.0 6.9E-35 2.3E-39 300.4 16.0 226 376-638 24-258 (299)
248 3qa8_A MGC80376 protein; kinas 100.0 1.4E-35 4.7E-40 331.3 10.8 261 375-644 19-310 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 3.2E-35 1.1E-39 316.7 10.6 236 375-636 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 303.8 8.6 235 373-637 23-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 9.3E-29 3.2E-33 256.2 11.5 196 28-225 2-211 (313)
252 4azs_A Methyltransferase WBDD; 99.9 8.7E-29 3E-33 275.9 5.9 181 377-568 241-438 (569)
253 3rgz_A Protein brassinosteroid 99.9 8.5E-26 2.9E-30 262.4 10.4 181 24-207 4-217 (768)
254 4ecn_A Leucine-rich repeat pro 99.9 4E-26 1.4E-30 264.5 6.2 193 30-226 267-588 (876)
255 3en9_A Glycoprotease, O-sialog 99.9 9E-26 3.1E-30 250.2 8.0 177 375-569 341-539 (540)
256 4eco_A Uncharacterized protein 99.9 1E-25 3.4E-30 256.0 6.3 190 31-224 29-343 (636)
257 4fcg_A Uncharacterized protein 99.9 6.3E-24 2.1E-28 221.2 9.8 193 27-225 22-243 (328)
258 3m19_A Variable lymphocyte rec 99.9 6.8E-22 2.3E-26 197.7 14.1 148 70-218 36-183 (251)
259 3rgz_A Protein brassinosteroid 99.9 9.8E-23 3.4E-27 236.7 9.1 164 69-233 514-750 (768)
260 1zar_A RIO2 kinase; serine kin 99.9 2.5E-22 8.4E-27 204.2 10.1 138 376-541 96-252 (282)
261 3e6j_A Variable lymphocyte rec 99.8 3.2E-21 1.1E-25 190.0 12.2 150 55-206 15-175 (229)
262 2o6q_A Variable lymphocyte rec 99.8 7.7E-21 2.6E-25 192.3 15.3 146 71-217 39-184 (270)
263 2v70_A SLIT-2, SLIT homolog 2 99.8 2.3E-21 7.9E-26 189.7 10.9 149 59-207 11-170 (220)
264 2o6s_A Variable lymphocyte rec 99.8 7.6E-21 2.6E-25 184.4 12.8 149 58-207 6-165 (208)
265 2v9t_B SLIT homolog 2 protein 99.8 8.3E-21 2.8E-25 185.8 11.2 144 59-216 11-154 (220)
266 1ogq_A PGIP-2, polygalacturona 99.8 2.2E-21 7.5E-26 200.7 7.5 143 69-214 125-268 (313)
267 2o6q_A Variable lymphocyte rec 99.8 2.5E-19 8.6E-24 181.1 14.4 158 69-229 61-218 (270)
268 2v9t_B SLIT homolog 2 protein 99.8 2.2E-19 7.7E-24 175.5 12.5 136 69-205 32-167 (220)
269 2xot_A Amphoterin-induced prot 99.8 2.7E-20 9.4E-25 196.4 6.4 170 59-229 18-202 (361)
270 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.1E-24 175.0 12.1 153 58-218 4-157 (220)
271 3rfs_A Internalin B, repeat mo 99.8 4.9E-19 1.7E-23 179.1 14.4 148 68-218 62-209 (272)
272 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.4E-23 172.1 14.0 159 61-229 14-172 (229)
273 4fcg_A Uncharacterized protein 99.8 2.3E-19 7.8E-24 186.7 9.2 153 69-225 127-291 (328)
274 1w8a_A SLIT protein; signaling 99.8 4.9E-19 1.7E-23 169.3 10.6 132 72-207 11-143 (192)
275 1ozn_A Reticulon 4 receptor; N 99.8 6.3E-19 2.2E-23 179.6 12.1 156 69-225 32-191 (285)
276 2z80_A TOLL-like receptor 2, v 99.8 4.2E-19 1.4E-23 186.8 10.6 160 56-218 27-202 (353)
277 4g8a_A TOLL-like receptor 4; l 99.8 3.1E-19 1.1E-23 202.5 9.8 148 69-217 52-200 (635)
278 2z66_A Variable lymphocyte rec 99.8 4.7E-19 1.6E-23 182.5 10.2 156 59-216 7-177 (306)
279 2z62_A TOLL-like receptor 4, v 99.8 3.8E-19 1.3E-23 180.3 9.1 146 70-216 29-175 (276)
280 1ozn_A Reticulon 4 receptor; N 99.8 1.4E-18 4.8E-23 177.0 13.2 158 69-227 56-217 (285)
281 3m19_A Variable lymphocyte rec 99.8 3.4E-18 1.2E-22 170.8 14.8 167 57-228 3-172 (251)
282 3rfs_A Internalin B, repeat mo 99.8 1.8E-18 6E-23 175.1 12.7 138 69-207 85-222 (272)
283 2z81_A CD282 antigen, TOLL-lik 99.8 6.2E-19 2.1E-23 196.9 10.3 158 58-217 3-175 (549)
284 1zth_A RIO1 serine protein kin 99.8 1.6E-18 5.4E-23 173.8 12.1 133 375-523 52-220 (258)
285 1p9a_G Platelet glycoprotein I 99.8 2.3E-18 8E-23 175.7 12.9 155 69-227 31-188 (290)
286 2o6r_A Variable lymphocyte rec 99.8 1.8E-18 6.3E-23 162.9 10.0 135 59-207 7-141 (177)
287 1p9a_G Platelet glycoprotein I 99.8 2.8E-18 9.6E-23 175.2 12.1 141 69-214 55-195 (290)
288 3vq2_A TLR4, TOLL-like recepto 99.8 8.5E-19 2.9E-23 198.2 9.1 159 57-216 5-179 (606)
289 3v47_A TOLL-like receptor 5B a 99.7 1.2E-18 4.1E-23 189.8 9.0 158 57-215 6-179 (455)
290 2o6s_A Variable lymphocyte rec 99.7 1.5E-17 5.3E-22 160.9 15.0 148 64-218 5-152 (208)
291 3oja_B Anopheles plasmodium-re 99.7 2.1E-18 7E-23 194.6 10.2 155 70-225 52-206 (597)
292 1w8a_A SLIT protein; signaling 99.7 6.9E-19 2.4E-23 168.2 5.3 153 59-213 8-172 (192)
293 2id5_A Lingo-1, leucine rich r 99.7 3.1E-18 1.1E-22 187.8 11.2 165 60-225 12-190 (477)
294 2z66_A Variable lymphocyte rec 99.7 3.1E-18 1.1E-22 176.3 10.0 157 69-227 78-239 (306)
295 4b8c_D Glucose-repressible alc 99.7 6.8E-19 2.3E-23 202.0 5.6 194 30-227 130-357 (727)
296 3o6n_A APL1; leucine-rich repe 99.7 3E-18 1E-22 182.8 9.7 156 69-225 45-200 (390)
297 2wfh_A SLIT homolog 2 protein 99.7 1.2E-17 4E-22 159.7 11.2 129 73-206 14-142 (193)
298 2xwt_C Thyrotropin receptor; s 99.7 5.6E-18 1.9E-22 167.9 8.7 137 69-209 31-174 (239)
299 2ell_A Acidic leucine-rich nuc 99.7 3.9E-18 1.3E-22 159.2 6.6 137 69-209 24-165 (168)
300 3zyi_A Leucine-rich repeat-con 99.7 1.7E-17 5.8E-22 180.6 11.7 162 61-225 56-256 (452)
301 3v47_A TOLL-like receptor 5B a 99.7 1.6E-17 5.4E-22 180.9 11.4 138 69-207 275-412 (455)
302 3j0a_A TOLL-like receptor 5; m 99.7 2E-17 6.7E-22 194.1 12.1 166 59-225 14-188 (844)
303 3zyj_A Leucine-rich repeat-con 99.7 2.1E-17 7.1E-22 179.2 11.3 156 69-227 112-271 (440)
304 2z62_A TOLL-like receptor 4, v 99.7 6.2E-18 2.1E-22 171.4 6.5 158 69-227 52-216 (276)
305 3t6q_A CD180 antigen; protein- 99.7 1.4E-17 5E-22 188.1 10.2 166 61-227 14-195 (606)
306 4eco_A Uncharacterized protein 99.7 4.2E-18 1.4E-22 193.3 5.6 156 68-227 205-393 (636)
307 1wwl_A Monocyte differentiatio 99.7 2.7E-18 9.3E-23 177.3 3.5 137 70-207 96-245 (312)
308 1ziw_A TOLL-like receptor 3; i 99.7 1.6E-17 5.3E-22 190.5 10.1 157 69-226 25-186 (680)
309 3vq2_A TLR4, TOLL-like recepto 99.7 1.3E-17 4.4E-22 188.5 9.3 157 69-227 376-537 (606)
310 2xot_A Amphoterin-induced prot 99.7 4.9E-17 1.7E-21 171.4 12.0 162 58-227 11-179 (361)
311 4ecn_A Leucine-rich repeat pro 99.7 1.3E-17 4.6E-22 193.2 8.3 164 59-227 435-635 (876)
312 3zyi_A Leucine-rich repeat-con 99.7 3.5E-17 1.2E-21 178.1 10.7 156 69-227 123-282 (452)
313 3zyj_A Leucine-rich repeat-con 99.7 5.9E-17 2E-21 175.7 12.4 155 69-226 88-246 (440)
314 2je0_A Acidic leucine-rich nuc 99.7 7.4E-18 2.5E-22 153.9 4.5 128 69-199 17-149 (149)
315 1wwl_A Monocyte differentiatio 99.7 7.8E-18 2.7E-22 173.9 5.1 157 68-227 120-290 (312)
316 2ft3_A Biglycan; proteoglycan, 99.7 5.5E-17 1.9E-21 169.0 11.5 163 59-227 33-209 (332)
317 4glp_A Monocyte differentiatio 99.7 4.4E-17 1.5E-21 168.0 9.9 158 68-227 116-288 (310)
318 1xku_A Decorin; proteoglycan, 99.7 3.7E-17 1.3E-21 170.1 9.4 162 59-225 31-206 (330)
319 2z63_A TOLL-like receptor 4, v 99.7 3.7E-17 1.3E-21 183.3 9.3 147 69-216 28-175 (570)
320 2xwt_C Thyrotropin receptor; s 99.7 4.3E-17 1.5E-21 161.4 8.2 154 69-227 55-221 (239)
321 3t6q_A CD180 antigen; protein- 99.7 3.4E-17 1.2E-21 185.1 8.3 158 69-227 376-539 (606)
322 4ezg_A Putative uncharacterize 99.7 2.9E-17 9.9E-22 157.6 6.5 140 69-217 44-184 (197)
323 3cvr_A Invasion plasmid antige 99.7 4.7E-17 1.6E-21 180.4 9.0 156 50-228 35-197 (571)
324 3oja_B Anopheles plasmodium-re 99.7 9.4E-17 3.2E-21 181.0 10.8 112 69-181 75-186 (597)
325 4glp_A Monocyte differentiatio 99.7 3.1E-17 1.1E-21 169.2 5.9 158 69-227 91-267 (310)
326 2id5_A Lingo-1, leucine rich r 99.7 9.4E-17 3.2E-21 176.0 9.9 149 69-218 56-204 (477)
327 3j0a_A TOLL-like receptor 5; m 99.7 1.4E-16 4.7E-21 186.9 11.9 132 90-223 422-559 (844)
328 4ezg_A Putative uncharacterize 99.7 1.2E-16 4E-21 153.4 9.0 129 69-204 66-195 (197)
329 4g8a_A TOLL-like receptor 4; l 99.7 1.2E-16 4.1E-21 181.2 10.5 159 69-229 420-580 (635)
330 2z63_A TOLL-like receptor 4, v 99.7 1.2E-16 4E-21 179.1 10.3 145 70-216 374-520 (570)
331 3o6n_A APL1; leucine-rich repe 99.7 2.1E-16 7.2E-21 168.5 10.9 112 69-181 69-180 (390)
332 2ft3_A Biglycan; proteoglycan, 99.7 3.6E-16 1.2E-20 162.8 12.4 154 69-227 102-280 (332)
333 1xku_A Decorin; proteoglycan, 99.6 2.6E-16 9E-21 163.7 10.7 142 69-215 100-264 (330)
334 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 5.7E-16 1.9E-20 173.4 13.2 134 91-227 350-489 (562)
335 2z80_A TOLL-like receptor 2, v 99.6 7.8E-17 2.7E-21 169.4 5.8 158 69-228 76-239 (353)
336 3oja_A Leucine-rich immune mol 99.6 1.1E-16 3.9E-21 175.4 6.8 151 69-225 58-228 (487)
337 2z7x_B TOLL-like receptor 1, v 99.6 3.9E-16 1.3E-20 173.0 10.7 134 91-227 321-460 (520)
338 1ziw_A TOLL-like receptor 3; i 99.6 8.3E-16 2.8E-20 176.1 13.7 159 69-227 405-576 (680)
339 2z7x_B TOLL-like receptor 1, v 99.6 3.6E-16 1.2E-20 173.3 9.9 146 68-218 323-472 (520)
340 2ell_A Acidic leucine-rich nuc 99.6 2.7E-16 9.1E-21 146.7 7.0 127 91-219 21-152 (168)
341 2wfh_A SLIT homolog 2 protein 99.6 5.3E-16 1.8E-20 148.1 9.1 120 59-180 10-140 (193)
342 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 8E-16 2.7E-20 172.2 11.3 155 68-229 352-510 (562)
343 3oja_A Leucine-rich immune mol 99.6 1E-16 3.5E-21 175.8 3.7 142 69-218 99-241 (487)
344 2je0_A Acidic leucine-rich nuc 99.6 1E-16 3.4E-21 146.4 2.9 126 91-218 14-144 (149)
345 4ay9_X Follicle-stimulating ho 99.6 8E-16 2.7E-20 161.4 10.0 167 59-228 9-219 (350)
346 1h6t_A Internalin B; cell adhe 99.6 7.8E-16 2.7E-20 157.1 9.3 146 69-227 68-216 (291)
347 1h6u_A Internalin H; cell adhe 99.6 6.9E-16 2.3E-20 158.9 8.9 147 68-227 62-211 (308)
348 1h6u_A Internalin H; cell adhe 99.6 1.5E-15 5E-20 156.5 11.2 145 69-226 41-188 (308)
349 2z81_A CD282 antigen, TOLL-lik 99.6 7.1E-16 2.4E-20 172.0 9.1 156 64-225 2-162 (549)
350 1h6t_A Internalin B; cell adhe 99.6 1.5E-15 5.1E-20 155.0 10.4 144 69-225 46-192 (291)
351 4gyi_A RIO2 kinase; protein ki 99.6 2.2E-15 7.6E-20 157.0 11.9 134 375-523 100-266 (397)
352 4b8c_D Glucose-repressible alc 99.6 4.6E-17 1.6E-21 186.9 -1.1 143 67-214 222-365 (727)
353 3o53_A Protein LRIM1, AGAP0063 99.6 1E-16 3.6E-21 165.8 1.5 142 69-218 99-241 (317)
354 1xeu_A Internalin C; cellular 99.6 9.3E-16 3.2E-20 154.1 8.3 144 69-226 41-187 (263)
355 1a9n_A U2A', U2A'; complex (nu 99.6 4.4E-16 1.5E-20 146.4 5.5 129 69-203 19-153 (176)
356 1m9s_A Internalin B; cell inva 99.6 1.8E-15 6.1E-20 169.5 11.1 150 68-230 64-216 (605)
357 3g39_A Variable lymphocyte rec 99.6 2.6E-15 8.8E-20 140.3 9.7 103 73-179 13-115 (170)
358 2o6r_A Variable lymphocyte rec 99.6 3.2E-15 1.1E-19 140.6 8.5 114 69-183 28-141 (177)
359 3o53_A Protein LRIM1, AGAP0063 99.6 1.5E-15 5.3E-20 157.0 6.8 148 68-227 79-230 (317)
360 1ds9_A Outer arm dynein; leuci 99.6 8.7E-18 3E-22 161.4 -10.1 146 69-219 18-179 (198)
361 2r9u_A Variable lymphocyte rec 99.6 6.2E-15 2.1E-19 138.2 9.7 104 72-179 15-118 (174)
362 3g39_A Variable lymphocyte rec 99.6 7.3E-15 2.5E-19 137.2 9.5 109 96-207 11-119 (170)
363 1dce_A Protein (RAB geranylger 99.5 3.7E-15 1.3E-19 165.9 7.9 107 96-207 443-550 (567)
364 1m9s_A Internalin B; cell inva 99.5 4.9E-15 1.7E-19 165.9 8.4 145 69-226 43-190 (605)
365 1o6v_A Internalin A; bacterial 99.5 8.5E-15 2.9E-19 159.9 9.8 126 69-205 221-346 (466)
366 1xeu_A Internalin C; cellular 99.5 1.1E-14 3.7E-19 146.3 9.6 126 68-205 62-187 (263)
367 2r9u_A Variable lymphocyte rec 99.5 1.1E-14 3.6E-19 136.5 8.9 107 97-206 15-121 (174)
368 3cvr_A Invasion plasmid antige 99.5 1.5E-14 5E-19 160.4 11.1 136 69-227 80-223 (571)
369 4fmz_A Internalin; leucine ric 99.5 6.3E-15 2.2E-19 154.3 7.4 146 69-225 177-325 (347)
370 3g06_A SSPH2 (leucine-rich rep 99.5 1.1E-14 3.7E-19 163.4 7.8 153 51-225 15-175 (622)
371 3bz5_A Internalin-J, INLJ; leu 99.5 6E-14 2.1E-18 152.4 13.4 144 69-230 106-252 (457)
372 1jl5_A Outer protein YOPM; leu 99.5 5.1E-14 1.7E-18 152.8 12.7 120 70-207 112-231 (454)
373 3bz5_A Internalin-J, INLJ; leu 99.5 7.3E-14 2.5E-18 151.7 13.2 148 69-231 85-232 (457)
374 1dce_A Protein (RAB geranylger 99.5 1.4E-14 5E-19 161.1 7.7 133 89-227 404-549 (567)
375 1o6v_A Internalin A; bacterial 99.5 4.5E-14 1.5E-18 154.1 10.8 146 68-226 198-346 (466)
376 1a9n_A U2A', U2A'; complex (nu 99.5 1.2E-14 4.2E-19 136.4 4.9 124 90-219 15-145 (176)
377 4fmz_A Internalin; leucine ric 99.5 3.8E-14 1.3E-18 148.3 8.4 144 69-225 155-301 (347)
378 1jl5_A Outer protein YOPM; leu 99.5 1.6E-13 5.5E-18 148.9 12.1 141 69-227 91-231 (454)
379 2ast_B S-phase kinase-associat 99.5 1.3E-15 4.6E-20 158.6 -4.4 145 69-215 70-223 (336)
380 2ifg_A High affinity nerve gro 99.4 6.5E-14 2.2E-18 146.6 7.7 108 59-180 8-117 (347)
381 2ast_B S-phase kinase-associat 99.4 1.3E-15 4.5E-20 158.7 -5.8 139 60-203 38-182 (336)
382 2ifg_A High affinity nerve gro 99.4 1.7E-13 5.9E-18 143.4 8.8 107 97-206 11-119 (347)
383 2ca6_A RAN GTPase-activating p 99.4 6.8E-15 2.3E-19 156.5 -2.7 150 69-218 60-248 (386)
384 2ca6_A RAN GTPase-activating p 99.4 4.2E-15 1.4E-19 158.1 -5.6 136 69-205 94-259 (386)
385 3g06_A SSPH2 (leucine-rich rep 99.4 9.2E-13 3.1E-17 147.7 12.2 94 69-179 61-154 (622)
386 3goz_A Leucine-rich repeat-con 99.4 1.1E-14 3.8E-19 153.5 -4.0 139 69-208 22-185 (362)
387 4ay9_X Follicle-stimulating ho 99.4 9E-13 3.1E-17 138.1 10.6 144 64-214 7-153 (350)
388 1ds9_A Outer arm dynein; leuci 99.4 3.2E-15 1.1E-19 143.4 -7.7 128 68-203 47-185 (198)
389 3goz_A Leucine-rich repeat-con 99.4 3E-14 1E-18 150.1 -2.1 151 73-224 2-180 (362)
390 1z7x_W Ribonuclease inhibitor; 99.2 1.2E-13 4E-18 150.4 -7.1 157 68-224 226-411 (461)
391 1z7x_W Ribonuclease inhibitor; 99.2 1.4E-13 4.7E-18 149.9 -7.6 155 69-224 199-383 (461)
392 3sb4_A Hypothetical leucine ri 99.2 4.4E-11 1.5E-15 124.0 8.9 54 69-124 101-154 (329)
393 3tm0_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.6E-15 116.1 10.7 134 376-520 20-212 (263)
394 3rw6_A Nuclear RNA export fact 99.1 4.3E-13 1.5E-17 133.2 -9.1 158 58-219 77-256 (267)
395 3un9_A NLR family member X1; l 99.1 2.1E-12 7.3E-17 136.0 -5.2 134 70-203 102-252 (372)
396 1nd4_A Aminoglycoside 3'-phosp 99.1 3.4E-10 1.2E-14 112.8 9.8 130 377-521 26-214 (264)
397 3sb4_A Hypothetical leucine ri 99.0 1.8E-10 6.1E-15 119.4 6.7 79 69-148 49-154 (329)
398 3un9_A NLR family member X1; l 99.0 3.2E-12 1.1E-16 134.6 -9.0 136 69-205 72-226 (372)
399 3dxp_A Putative acyl-COA dehyd 99.0 2E-09 6.8E-14 112.9 11.2 138 376-521 44-248 (359)
400 3ogk_B Coronatine-insensitive 98.8 1.3E-10 4.3E-15 130.6 -4.6 137 69-205 342-503 (592)
401 3ogk_B Coronatine-insensitive 98.7 8.7E-10 3E-14 123.8 -0.6 128 71-200 140-280 (592)
402 3rw6_A Nuclear RNA export fact 98.7 1.1E-10 3.9E-15 115.7 -7.0 117 78-196 125-257 (267)
403 3sg8_A APH(2'')-ID; antibiotic 98.7 6E-09 2.1E-13 106.5 4.6 180 376-569 26-288 (304)
404 4fdw_A Leucine rich hypothetic 98.6 1.1E-07 3.9E-12 100.8 10.2 138 69-213 203-345 (401)
405 1io0_A Tropomodulin; LRR prote 98.5 4.1E-09 1.4E-13 99.3 -2.7 115 89-203 31-164 (185)
406 2p1m_B Transport inhibitor res 98.5 1.9E-09 6.5E-14 121.0 -6.0 135 69-204 338-495 (594)
407 4fdw_A Leucine rich hypothetic 98.5 2.6E-07 8.9E-12 98.0 10.4 126 71-203 159-284 (401)
408 2p1m_B Transport inhibitor res 98.4 2.1E-09 7.3E-14 120.6 -8.5 153 69-223 314-493 (594)
409 3r70_A Aminoglycoside phosphot 98.4 7.2E-07 2.5E-11 91.7 10.6 131 376-522 43-238 (320)
410 3d1u_A Putative fructosamine-3 98.3 3.8E-06 1.3E-10 84.7 13.2 139 376-520 21-215 (288)
411 2ra8_A Uncharacterized protein 98.3 4.6E-08 1.6E-12 102.0 -1.1 133 69-205 139-294 (362)
412 1io0_A Tropomodulin; LRR prote 98.3 5E-08 1.7E-12 91.8 -2.1 111 68-179 35-164 (185)
413 4gkh_A Aminoglycoside 3'-phosp 98.2 4.5E-06 1.5E-10 83.3 11.4 133 377-520 31-222 (272)
414 2ra8_A Uncharacterized protein 98.2 2.4E-07 8.2E-12 96.6 1.8 132 69-204 172-321 (362)
415 3tdw_A Gentamicin resistance p 98.2 6.5E-06 2.2E-10 83.9 11.8 134 376-521 25-224 (306)
416 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.6E-06 2.9E-10 85.1 10.4 142 376-522 47-244 (362)
417 3ats_A Putative uncharacterize 98.0 8E-06 2.7E-10 85.1 7.9 78 376-453 26-121 (357)
418 2q83_A YTAA protein; 2635576, 97.9 5.8E-05 2E-09 77.9 12.5 141 376-520 38-251 (346)
419 2olc_A MTR kinase, methylthior 97.7 0.00012 4.2E-09 77.3 11.6 73 376-450 36-120 (397)
420 3e4g_A ATP synthase subunit S, 97.6 1.5E-05 5E-10 73.3 1.8 83 94-176 61-149 (176)
421 4h09_A Hypothetical leucine ri 97.6 0.00013 4.3E-09 76.6 8.4 122 89-214 212-333 (379)
422 3e4g_A ATP synthase subunit S, 97.5 1.3E-05 4.4E-10 73.7 -0.0 91 111-201 54-150 (176)
423 3f7w_A Putative fructosamine-3 97.5 0.00061 2.1E-08 68.4 12.0 73 376-452 21-97 (288)
424 4gt6_A Cell surface protein; l 97.5 0.00011 3.6E-09 77.7 6.0 116 84-203 255-370 (394)
425 3jr1_A Putative fructosamine-3 97.4 0.0019 6.5E-08 65.5 14.0 138 376-517 42-232 (312)
426 4fs7_A Uncharacterized protein 97.4 0.00045 1.6E-08 72.8 9.4 125 70-200 231-376 (394)
427 4h09_A Hypothetical leucine ri 97.3 0.00047 1.6E-08 72.2 8.4 126 70-200 218-343 (379)
428 4gt6_A Cell surface protein; l 97.3 0.00045 1.5E-08 72.9 8.1 119 94-217 242-360 (394)
429 3dxq_A Choline/ethanolamine ki 97.3 0.00065 2.2E-08 68.7 9.0 70 376-452 24-95 (301)
430 1zyl_A Hypothetical protein YI 97.2 0.0025 8.7E-08 65.0 13.4 142 377-521 33-223 (328)
431 2pyw_A Uncharacterized protein 97.2 0.0014 4.7E-08 69.8 11.3 73 491-564 232-312 (420)
432 4fs7_A Uncharacterized protein 97.1 0.00072 2.5E-08 71.3 8.2 67 84-152 61-127 (394)
433 1pgv_A TMD-1, tropomodulin TMD 97.0 5.9E-05 2E-09 70.6 -2.2 114 89-202 36-169 (197)
434 3rfe_A Platelet glycoprotein I 96.9 0.00084 2.9E-08 58.6 5.2 56 73-131 12-68 (130)
435 2ppq_A HSK, HK, homoserine kin 96.9 0.0038 1.3E-07 63.5 10.8 143 376-520 28-216 (322)
436 3csv_A Aminoglycoside phosphot 96.9 0.0027 9.3E-08 65.0 9.5 142 377-522 25-218 (333)
437 3feg_A Choline/ethanolamine ki 96.8 0.0062 2.1E-07 63.5 11.4 142 376-521 56-254 (379)
438 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.1E-08 56.0 6.4 57 97-155 11-68 (130)
439 2yle_A Protein spire homolog 1 96.6 0.019 6.4E-07 54.0 11.7 102 451-568 34-136 (229)
440 3c5i_A Choline kinase; choline 96.5 0.0039 1.3E-07 64.9 7.1 73 376-452 39-121 (369)
441 1nw1_A Choline kinase (49.2 KD 96.4 0.014 4.6E-07 62.1 10.8 72 376-452 79-159 (429)
442 2qg7_A Ethanolamine kinase PV0 96.2 0.025 8.5E-07 60.5 12.0 73 376-452 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.2 0.013 4.5E-07 60.1 9.6 31 491-521 206-236 (339)
444 1pgv_A TMD-1, tropomodulin TMD 96.0 0.0012 4E-08 61.7 0.0 88 114-201 37-137 (197)
445 2k1k_A Ephrin type-A receptor 94.6 0.013 4.5E-07 38.3 1.7 32 258-289 7-38 (38)
446 3mes_A Choline kinase; malaria 93.5 0.27 9.2E-06 51.8 10.1 73 376-452 76-157 (424)
447 3f2s_A CK, chetk-alpha, cholin 93.2 0.38 1.3E-05 50.2 10.6 141 376-520 58-279 (401)
448 2ks1_B Epidermal growth factor 92.0 0.13 4.4E-06 34.7 3.2 31 263-293 12-42 (44)
449 2l2t_A Receptor tyrosine-prote 89.7 0.2 6.8E-06 33.7 2.4 29 264-292 12-40 (44)
450 4ann_A ESSB; membrane protein, 89.7 1.1 3.6E-05 42.0 8.3 117 423-571 43-160 (215)
451 2jwa_A Receptor tyrosine-prote 82.9 0.66 2.3E-05 31.1 2.1 26 264-290 14-39 (44)
452 4ano_A ESSB; membrane protein, 82.2 3 0.0001 39.1 7.2 116 423-571 48-165 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 74.7 0.48 1.6E-05 50.6 -0.9 57 376-435 148-214 (463)
454 2l34_A TYRO protein tyrosine k 62.8 3.9 0.00014 25.6 1.9 27 259-285 4-30 (33)
455 3g15_A CK, chetk-alpha, cholin 61.1 3.7 0.00013 42.7 2.5 29 493-521 246-280 (401)
456 2lz0_A Uncharacterized protein 60.1 18 0.00061 29.1 6.0 47 80-128 7-53 (100)
457 2k9y_A Ephrin type-A receptor 55.4 9.8 0.00034 24.9 3.0 12 266-277 14-25 (41)
458 2klu_A T-cell surface glycopro 45.4 21 0.00073 25.9 3.5 18 267-284 12-29 (70)
459 2lz0_A Uncharacterized protein 42.0 41 0.0014 26.9 5.3 47 104-151 6-52 (100)
460 3ls8_A Phosphatidylinositol 3- 34.3 2.5E+02 0.0086 30.5 11.5 47 468-520 453-501 (614)
461 2ks1_B Epidermal growth factor 32.7 28 0.00097 23.3 2.4 33 263-295 9-41 (44)
462 1iij_A ERBB-2 receptor protein 31.4 8 0.00027 24.4 -0.4 6 284-289 29-34 (35)
463 1cja_A Protein (actin-fragmin 24.5 3.2E+02 0.011 27.1 9.4 78 439-521 156-237 (342)
464 2knc_B Integrin beta-3; transm 20.6 48 0.0016 25.3 2.0 13 266-278 12-24 (79)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-52 Score=432.49 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=202.7
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|+++ +++.||||+++... ...++|.+|++++++++|||||+++|+|.+.+..++|||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 468999999999999864 47899999997653 23567999999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 448 TMGSLSALLHGNKG----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 448 ~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
++|+|.++++.... ....+++|..++.|+.|||.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCCCcEEEcccc
Confidence 99999999976432 12346999999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 518 LAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 518 ~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
+++...... ...+|+.|||||++.+..++.++|||||||++|||+| |+.||.... ....+..+....
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~g~ 277 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS------NTEAIDCITQGR 277 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC------HHHHHHHHHHTC
T ss_pred cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcCC
Confidence 998764432 2346778999999999999999999999999999999 899996532 223333333222
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.. ..+..++.++.+++.+||+.||++||||+||+++|+.+.+.
T Consensus 278 ~~-----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 278 EL-----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CC-----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CC-----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11 11223345788899999999999999999999999998654
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-52 Score=429.02 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=204.6
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||||+++|+|.+.+..++||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 468999999999999863 57899999997543 3357899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEec
Q 006055 447 LTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSD 515 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~D 515 (663)
|++|+|.++|+..... ....++|..+..|+.|||.||+|||+++ ||||||||+||||++++.+||+|
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEECCCCCEEECC
Confidence 9999999999753211 1246899999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHh
Q 006055 516 FGLAHLVGPS------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 516 fg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
||+++..... ....+|+.|||||++.+..++.++|||||||++|||+| |+.||.... ....+..+..
T Consensus 189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~------~~~~~~~i~~ 262 (308)
T 4gt4_A 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVVEMIRN 262 (308)
T ss_dssp SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC------HHHHHHHHHT
T ss_pred cccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc
Confidence 9999865332 12346778999999999999999999999999999999 899996532 2233333322
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.... +.+.+++.++.+++.+||+.||++||||+||+++|+.+
T Consensus 263 ~~~~-----------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 RQVL-----------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCC-----------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2111 11233455788999999999999999999999999875
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-52 Score=428.71 Aligned_cols=251 Identities=25% Similarity=0.383 Sum_probs=206.0
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|++. +++.||||+++... ...++|.+|++++++++|||||+++|+|.+.+..++|||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 468999999999999853 47899999997653 23567999999999999999999999999999999999999
Q ss_pred CCCChhHhhccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 448 TMGSLSALLHGNK--------GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 448 ~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
++|+|.++++... +.....++|..+..|+.|||.||+|||+++ |+||||||+|||+++++.+||+|||+|
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCCCcEEECCcccc
Confidence 9999999997542 123456999999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 520 HLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 520 ~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
+....... ..+|+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+.+..+......
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVIECITQGRVL 249 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHHTCCC
T ss_pred eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcCCCC
Confidence 87644321 236778999999999999999999999999999999 899997532 22333333332211
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
..+..++.++.+++.+||+.||++|||++||++.|+++...
T Consensus 250 -----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 250 -----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11223445788999999999999999999999999988544
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-51 Score=417.31 Aligned_cols=250 Identities=30% Similarity=0.435 Sum_probs=199.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.++||+|+||+||+|+++. .||||.++....+ .+.|.+|++++++++|||||+++++|.+ +..++|||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 5789999999999998753 5999998755333 3679999999999999999999998864 57899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.++++... ..++|..+..|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 118 L~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~ 191 (307)
T 3omv_A 118 LYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp HHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred HHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence 999997543 35999999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 526 STPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
....+|+.|||||++.+ ..|+.++|||||||++|||+||+.||..... ...+.......... +..
T Consensus 192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~------~~~~~~~~~~~~~~----p~~-- 259 (307)
T 3omv_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGYAS----PDL-- 259 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHTTCCC----CCS--
T ss_pred cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcCCCC----CCc--
Confidence 12357889999999854 4589999999999999999999999965321 22222333222111 100
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.....+++.++.+++.+||+.||++||||.||+++|+.+....
T Consensus 260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 0111234457888999999999999999999999999886543
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-51 Score=423.28 Aligned_cols=258 Identities=23% Similarity=0.300 Sum_probs=200.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecC----ccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMD----EKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ey~~~g 450 (663)
.++||+|+||+||+|++. |+.||||+++........++.|+..+.+++|||||+++++|.+++ ..++|||||++|
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 468999999999999985 899999999765433444556777778899999999999998764 468999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc------CCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ------GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~------~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
+|.++++.. .++|..+.+++.|+|.||+|||++ .++|+||||||+|||++.++.+||+|||+|+....
T Consensus 87 sL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 87 SLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp BHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 999999853 489999999999999999999986 24599999999999999999999999999987644
Q ss_pred CC--------CCCCCccccCccccCCC------CCCCcchhhhHHHHHHHHHhCCCCCccccCCC---------CCChHH
Q 006055 525 SS--------TPNRVAGYRAPEVTDPC------KVSQKADVYSFGVLLLELLTGKAPTHALLNEE---------GVDLPR 581 (663)
Q Consensus 525 ~~--------~~~~~~~y~aPE~~~~~------~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~---------~~~~~~ 581 (663)
.. ...+|+.|||||++.+. .++.++|||||||++|||+||+.||....... ......
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 32 12478889999998764 35778999999999999999988775432211 011222
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
....+... ..++.+.......+.+..+.+++.+||+.||++||||.||+++|+++.++
T Consensus 241 ~~~~~~~~-----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 241 MRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcc-----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22222211 12222222222335667889999999999999999999999999998654
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-50 Score=418.68 Aligned_cols=247 Identities=21% Similarity=0.253 Sum_probs=201.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||+|+||+||+|.. .+|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..++||||+++|+|.
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 46799999999999995 5699999999976432 246999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCCC------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPSS------ 526 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~------ 526 (663)
++++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+|+......
T Consensus 139 ~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 139 QLIKQMG-----CLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 9997533 5899999999999999999999998 99999999999999988 69999999998765431
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...||+.|||||++.+..|+.++|||||||++|||++|+.||......+ + +..+........
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~---~~~i~~~~~~~~--------- 276 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---L---CLKIASEPPPIR--------- 276 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---C---HHHHHHSCCGGG---------
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---H---HHHHHcCCCCch---------
Confidence 1247889999999999999999999999999999999999997543221 1 122222211100
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
..+.....++.+++.+||..||++|||+.|++++|.........
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~ 320 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence 01122344677888899999999999999999999877554433
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.5e-50 Score=407.11 Aligned_cols=241 Identities=25% Similarity=0.412 Sum_probs=194.7
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec----CccEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM----DEKLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~lv~ey~ 447 (663)
++||+|+||+||+|.. .++..||||++...... .+.|.+|++++++++|||||+++++|.+. ...++||||+
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 5799999999999995 56899999999765433 35689999999999999999999998752 3479999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~ 526 (663)
++|+|.++++... .+++..+..++.||+.||+|||+++++|+||||||+|||++. ++.+||+|||+|+......
T Consensus 112 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 9999999997533 589999999999999999999999878999999999999984 7899999999998654432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.... +.......+..... ...++
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~i~~~~~-~~~~~------- 252 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVK-PASFD------- 252 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCC-CGGGG-------
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHHHHcCCC-CCCCC-------
Confidence 2458899999999875 59999999999999999999999996422 22222332222211 11111
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+||..||++|||++|+++|
T Consensus 253 --~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 --KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112357788889999999999999999873
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.5e-50 Score=416.45 Aligned_cols=241 Identities=22% Similarity=0.335 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+.+..|+||||+++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 46899999999999994 57999999999765433 356899999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 109 ~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 109 DLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp BHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred cHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 9999997543 235789999999999999999999998 9999999999999999999999999998775432
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||... +....+..+........ .
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~~~~~-----------~ 246 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVLKIISGSFPPV-----------S 246 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCCCCC-----------C
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCCCCCC-----------C
Confidence 234788999999999999999999999999999999999999642 34445555554432110 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+||..||++|||++|++++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1223467888899999999999999999875
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.5e-50 Score=413.75 Aligned_cols=239 Identities=24% Similarity=0.378 Sum_probs=200.5
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+++++.++|||||+++++|.+.+..|+||||+++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 6799999999999995 579999999996543 33456889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 529 (663)
+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..... .+..
T Consensus 160 ~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 231 (346)
T 4fih_A 160 DIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 231 (346)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc
Confidence 999753 3899999999999999999999998 999999999999999999999999999876543 2345
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
||+.|||||++.+..|+.++|||||||++|||++|+.||... +....+..+... ..... ......
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~-~~~~~--------~~~~~~ 296 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAMKMIRDN-LPPRL--------KNLHKV 296 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHS-SCCCC--------SCGGGS
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcC-CCCCC--------CccccC
Confidence 888999999999999999999999999999999999999642 223333333222 11111 111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..++.+++.+||..||++|||++|+++|
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 3467788889999999999999999884
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-49 Score=416.54 Aligned_cols=252 Identities=24% Similarity=0.358 Sum_probs=203.5
Q ss_pred hcccccccceEEEEEEecC------CcEEEEEEecCccc--CHHHHHHHHHHhhcCCC-CCcccceEEEEec-CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEM------GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNH-ENLVPLRAYYYSM-DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~-~~~~lv~ 444 (663)
.+.||+|+||+||+|.+.. ++.||||+++.... ..+.|.+|++++.+++| ||||+++|+|.+. ...++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 5789999999999998542 36899999976532 24679999999999966 8999999999765 4689999
Q ss_pred EccCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEE
Q 006055 445 DYLTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARV 513 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl 513 (663)
|||++|+|.++|+.... .....++|..+..++.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~~NILl~~~~~vKi 226 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 226 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCccceeeCCCCCEEE
Confidence 99999999999975431 11345899999999999999999999998 999999999999999999999
Q ss_pred eccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHH
Q 006055 514 SDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 514 ~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
+|||+|+....... ..+|+.|||||++.+..|+.++|||||||++|||+| |+.||..... ...+...
T Consensus 227 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~------~~~~~~~ 300 (353)
T 4ase_A 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------DEEFCRR 300 (353)
T ss_dssp CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC------SHHHHHH
T ss_pred CcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH------HHHHHHH
Confidence 99999987654332 235677999999999999999999999999999998 9999975322 1223333
Q ss_pred HhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 587 VKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+.++.... .+...+.++.+++.+||+.||++|||+.||+++|+++.+.
T Consensus 301 i~~g~~~~----------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 301 LKEGTRMR----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCC----------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 33322111 1122345688899999999999999999999999988543
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.5e-49 Score=404.21 Aligned_cols=237 Identities=21% Similarity=0.307 Sum_probs=200.7
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|. ..+|+.||||++... ....+.+.+|+++++.++|||||++++++.+.+..++||||+++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 5789999999999999 467999999999753 23356799999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 117 G~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 117 GELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence 99999997533 5899999999999999999999998 9999999999999999999999999998765332
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
+..||+.|||||++.+..|+.++||||+||++|||++|+.||... +.......+......
T Consensus 190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~~~~----------- 252 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEGLIFAKIIKLEYD----------- 252 (311)
T ss_dssp CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCC-----------
T ss_pred cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCC-----------
Confidence 235888999999999999999999999999999999999999642 334444444443221
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.+.....++.+++.+|+..||++|||++|+..
T Consensus 253 -~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 253 -FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -CCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 01112335778888999999999999999743
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-48 Score=414.33 Aligned_cols=240 Identities=24% Similarity=0.371 Sum_probs=200.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+.+|+.++|||||+++++|.+.+..|+|||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 36799999999999995 579999999997543 3346689999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.++++.. .+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+...... +.
T Consensus 236 ~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 236 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 9999753 3899999999999999999999998 9999999999999999999999999998765432 34
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.||+.|||||++.+..|+.++|||||||++|||++|+.||... +....+..+... ..... .....
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~-~~~~~--------~~~~~ 372 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAMKMIRDN-LPPRL--------KNLHK 372 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHS-CCCCC--------SCTTS
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcC-CCCCC--------ccccc
Confidence 5788899999999999999999999999999999999999642 223333333222 11111 11112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+||..||++|||++|+++|
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23467788889999999999999999884
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-48 Score=393.22 Aligned_cols=237 Identities=23% Similarity=0.328 Sum_probs=187.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|. ..+|+.||||++.... .....+.+|+++++.++|||||++++++.+.+..++||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 4689999999999999 4579999999997542 22467899999999999999999999999999999999999 6
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 97 g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 79999987533 5899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
+..||+.|||||++.+..+ +.++||||+||++|||++|+.||... +.....+.+...... .
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~------~~~~~~~~i~~~~~~------------~ 231 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVLFKNISNGVYT------------L 231 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCC------------C
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCC------------C
Confidence 3458889999999998876 57999999999999999999999642 333444444332211 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.....++.+++.+|++.||++|||++|+++|
T Consensus 232 p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11123457788889999999999999999984
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-48 Score=398.97 Aligned_cols=237 Identities=27% Similarity=0.316 Sum_probs=190.7
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|+. .+++.||||.++... .....+.+|++++++++|||||++++++.+++..++||||+
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 47899999999999984 247899999997542 12346888999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-- 525 (663)
++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 109 ~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 109 RGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp TTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 9999999997533 5899999999999999999999998 999999999999999999999999999865432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 526 --STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 526 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.+..||+.|||||++.+..|+.++||||+||++|||++|+.||... +....+..+......
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~~~----------- 244 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK------DRKETMTMILKAKLG----------- 244 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC-----------
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc------CHHHHHHHHHcCCCC-----------
Confidence 2345888999999999999999999999999999999999999642 333444444433211
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIK 636 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~ 636 (663)
.+.....++.+++.+||+.||++|||+ +|+++
T Consensus 245 -~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 -MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 111223467788889999999999984 67765
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.3e-47 Score=387.48 Aligned_cols=240 Identities=21% Similarity=0.328 Sum_probs=183.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCc------------
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE------------ 439 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------------ 439 (663)
.+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 46899999999999995 579999999986542 234678999999999999999999999876543
Q ss_pred cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 440 KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 440 ~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
.++||||+++|+|.++++.... ....++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEccCccc
Confidence 5899999999999999985432 234577888999999999999999998 999999999999999999999999999
Q ss_pred cccCCCC----------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHH
Q 006055 520 HLVGPSS----------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWV 583 (663)
Q Consensus 520 ~~~~~~~----------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~ 583 (663)
+...... +..||+.|||||++.+..|+.++|||||||++|||++ ||....+ ....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-----~~~~~ 237 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-----RVRTL 237 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----HHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----HHHHH
Confidence 8765421 1247888999999999999999999999999999996 7753210 11111
Q ss_pred HHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 584 QSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 584 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+..... .+...+....+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~-----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 238 TDVRNLKF-----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHTTCC-----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCC-----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111110 01112233456778999999999999999999883
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-44 Score=382.18 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||+||+|.. .+|+.||||+++..... .+.+.+|+++|+.++|||||++++++... +..|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 46899999999999995 57999999999765333 35688999999999999999999987643 5679999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||++ |+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 139 E~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 139 DLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp ECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred eCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9996 6899999753 35999999999999999999999998 99999999999999999999999999986533
Q ss_pred C--------CCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc--
Q 006055 525 S--------STPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS-- 593 (663)
Q Consensus 525 ~--------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 593 (663)
. .+..+|+.|||||++.+. .++.++||||+||++|||++|+.||.+. +....+..+.......
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~------~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK------NYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS------SHHHHHHHHHHHHCCCCG
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhcCCCCh
Confidence 2 234578889999998775 5689999999999999999999999653 2223333332211100
Q ss_pred cccc----h-------hhhcc--cCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVFD----L-------ELLRY--QNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~d----~-------~~~~~--~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... . .+... ... .....++.+++.+|+..||++|||++|+++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0 00000 000 0113467788999999999999999999984
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-43 Score=372.59 Aligned_cols=185 Identities=24% Similarity=0.446 Sum_probs=162.5
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|+.+ +++.||||.+.... ....+.+|++++..+ +||||+++++++.+.++.++||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999843 47899999986543 456788999999988 699999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~-- 526 (663)
|+|.++++ .+++..+..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 99999995 2889999999999999999999998 9999999999999877 799999999997553321
Q ss_pred ------------------------------CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 527 ------------------------------TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 527 ------------------------------~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
+..+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 12478889999999775 589999999999999999999999964
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-42 Score=362.17 Aligned_cols=265 Identities=31% Similarity=0.532 Sum_probs=223.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|..++|+.||||++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 367999999999999988899999999876533 3567999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC------C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS------T 527 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------~ 527 (663)
+++.... .....++|..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 124 ~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 200 (321)
T 2qkw_B 124 RHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200 (321)
T ss_dssp GGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCC
T ss_pred HHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeecccccccccccccccccc
Confidence 9997543 22346899999999999999999999998 9999999999999999999999999998654321 1
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++||||||+++|||++|+.||......+......|.............+++... .....
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 279 (321)
T 2qkw_B 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA-DKIRP 279 (321)
T ss_dssp CEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT-TCSCH
T ss_pred cCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc-cccCH
Confidence 23567799999998888999999999999999999999999876666666677766555555444455544332 22345
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
+....+.+++.+|++.||++|||+.|++++|+.+..
T Consensus 280 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 677889999999999999999999999999998754
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-43 Score=389.65 Aligned_cols=241 Identities=22% Similarity=0.267 Sum_probs=194.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHH---HHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKD---KIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.++||+|+||+||+|.. .+|+.||||++++.. .....+.+ ++.+++.++|||||+++++|.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 46899999999999994 579999999996532 22333334 45667788999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+||||+.+|++||+|||+|+......
T Consensus 274 ~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 274 MNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 99999999997533 5899999999999999999999998 9999999999999999999999999998775543
Q ss_pred --CCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 --TPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
+..||+.|||||++. +..|+.++||||+||++|||++|+.||...... +.......+.....
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~---~~~~i~~~i~~~~~------------ 411 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDRMTLTMAV------------ 411 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC---CHHHHHHHHHHCCC------------
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhhcCCCC------------
Confidence 356899999999996 457999999999999999999999999764322 22222222222211
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
..+.....++.+++.+|+..||++|++ ++||.+|
T Consensus 412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 011122346778888999999999998 6888765
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.5e-43 Score=389.37 Aligned_cols=243 Identities=21% Similarity=0.341 Sum_probs=201.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||+||+|.. .+|+.||+|++..... ..+.+.+|+.+|+.++|||||+++++|.+....++|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 46899999999999995 5799999999876533 356788999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC--CceEEeccccccccCCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS--YEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~--~~~kl~Dfg~a~~~~~~~~--- 527 (663)
.+++.... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+|+...+...
T Consensus 242 ~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~ 315 (573)
T 3uto_A 242 FEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315 (573)
T ss_dssp HHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred HHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence 99986432 35899999999999999999999998 9999999999999854 8999999999998765532
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..+|+.|||||++.+..|+.++||||+||++|||++|+.||.+. +....+..+....... ... .+ .
T Consensus 316 ~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~------~~~~~~~~i~~~~~~~---~~~--~~---~ 381 (573)
T 3uto_A 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDETLRNVKSCDWNM---DDS--AF---S 381 (573)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHTTCCCC---CSG--GG---T
T ss_pred eEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHhCCCCC---Ccc--cc---c
Confidence 34788899999999999999999999999999999999999653 2333344443332211 000 11 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+||..||++|||++|+++|
T Consensus 382 ~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 382 GISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123456788889999999999999999983
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.6e-42 Score=362.09 Aligned_cols=277 Identities=39% Similarity=0.652 Sum_probs=226.8
Q ss_pred cccCHHHHHHHh-----hcccccccceEEEEEEecCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEE
Q 006055 363 RVFDLEDLLRAS-----AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYY 435 (663)
Q Consensus 363 ~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~ 435 (663)
..|++.++.... .+.||+|+||.||+|...+|+.||||++..... ....+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 346666665544 468999999999999988899999999876432 2346899999999999999999999999
Q ss_pred ecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc---CCcceecCCCCCCEEEcCCCceE
Q 006055 436 SMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ---GPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 436 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~---~~~iiHrdlk~~Nill~~~~~~k 512 (663)
+....++||||+++|+|.++++.... ....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC--EECCCCSGGGEEECTTCCEE
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999986542 244699999999999999999999998 6 99999999999999999999
Q ss_pred EeccccccccCCCC-----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCcccc--CCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSS-----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALL--NEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~ 585 (663)
|+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++|+.||+... .........|+..
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999998765432 2336788999999988888999999999999999999999997432 2233455666655
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
...........+.... .....+....+.+++.+|++.||++|||+.||+++|++...
T Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp TTSSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HhhchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 5555544455444332 23456778899999999999999999999999999987533
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-42 Score=360.51 Aligned_cols=255 Identities=27% Similarity=0.368 Sum_probs=202.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCc----cEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE----KLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv~ey~~~g 450 (663)
.++||+|+||+||+|... ++.||||+++........+..|+.++.+++||||+++++++..... .++||||+++|
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g 107 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCC
Confidence 468999999999999876 8999999997665555667779999999999999999999987554 59999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc----------CCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ----------GPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~----------~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|.++++.. .+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 108 SLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp BHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeEEEccCCccc
Confidence 999999753 389999999999999999999998 6 9999999999999999999999999997
Q ss_pred ccCCCCC------CCCCccccCccccCCC-----CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCC----------h
Q 006055 521 LVGPSST------PNRVAGYRAPEVTDPC-----KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVD----------L 579 (663)
Q Consensus 521 ~~~~~~~------~~~~~~y~aPE~~~~~-----~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~----------~ 579 (663)
....... ..++..|+|||++.+. .++.++|||||||++|||++|+.||.......... .
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 7654322 3467889999999863 45567899999999999999999998654332221 1
Q ss_pred HHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 580 PRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..+......... .+.............++.+++.+||+.||++|||++||++.|+++..
T Consensus 260 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 260 EDMQEVVVHKKK-----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHTTSCC-----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccC-----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111111111111 11111111123455678999999999999999999999999998753
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=351.37 Aligned_cols=249 Identities=25% Similarity=0.408 Sum_probs=203.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.++||+|+||+||+|.. .+++.||+|++... ....+.+.+|+++++.++||||+++++++.+....++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 47899999999999995 56999999988654 23356799999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC------
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS------ 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------ 526 (663)
.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 95 RGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 99998633 35899999999999999999999998 9999999999999999999999999998764332
Q ss_pred ------------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 527 ------------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 527 ------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
...++..|+|||++.+..++.++||||||+++|||++|..|+........... .........
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~----- 242 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-LNVRGFLDR----- 242 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-BCHHHHHHH-----
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-hhhhccccc-----
Confidence 23467789999999999999999999999999999999999875433221100 000000000
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
......+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 243 ---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 243 ---------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ---------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00112233578899999999999999999999999988654
No 24
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.8e-41 Score=348.88 Aligned_cols=252 Identities=31% Similarity=0.434 Sum_probs=198.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|.. +|+.||||++...... .+.+.+|++++++++||||+++++++.+....++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 46899999999999987 4899999999765433 3468899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|.+++..... ...+++..+..++.|++.||.|||+.+++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 121 L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 198 (309)
T 3p86_A 121 LYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198 (309)
T ss_dssp HHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------
T ss_pred HHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccccc
Confidence 9999975321 12489999999999999999999999877999999999999999999999999999765443 22
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+....... ..+.
T Consensus 199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~------~~~~~~~~~~~~~~~----------~~~~ 262 (309)
T 3p86_A 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN------PAQVVAAVGFKCKRL----------EIPR 262 (309)
T ss_dssp ---CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHHHSCCCC----------CCCT
T ss_pred CCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCC----------CCCc
Confidence 346788999999999999999999999999999999999996532 222222221111110 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
....++.+++.+||..||++|||++|+++.|+.+....
T Consensus 263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 23346788999999999999999999999999986653
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-41 Score=342.38 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=207.9
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|...+++.||+|++.......+.+.+|++++++++||||+++++++.+....++||||+++|+|.+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 36899999999999998889999999998877778899999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~~ 529 (663)
+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 95 ~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 168 (269)
T 4hcu_A 95 YLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168 (269)
T ss_dssp HHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEeccccccccccccccccccCcc
Confidence 997543 35899999999999999999999998 999999999999999999999999999866442 2233
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++||||+|+++|||++ |+.||.... .......+...... ..+..
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~------~~~~~~~~~~~~~~-----------~~~~~ 231 (269)
T 4hcu_A 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGFRL-----------YKPRL 231 (269)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTCCC-----------CCCTT
T ss_pred cccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhcCccC-----------CCCCc
Confidence 5567999999988889999999999999999999 999996432 22222222221110 01111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
...++.+++.+|++.||++|||++|++++|+++.+.
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 234678889999999999999999999999998654
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-41 Score=350.25 Aligned_cols=240 Identities=25% Similarity=0.354 Sum_probs=199.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||+||+|. ..+|+.||||++... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 3679999999999999 467999999998654 34467789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----CC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----TP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~~ 528 (663)
.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 105 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 105 TDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 9999753 3899999999999999999999998 9999999999999999999999999998765432 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+....... ......
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~---------~~~~~~ 241 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATNGTPE---------LQNPEK 241 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHHCSCC---------CSCGGG
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCC---------CCCccc
Confidence 47788999999999899999999999999999999999996432 122222222221110 111222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 34467888999999999999999999884
No 27
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.5e-41 Score=340.88 Aligned_cols=248 Identities=24% Similarity=0.372 Sum_probs=206.9
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|...++..||||+++......+++.+|++++..++||||+++++++.+....++||||+++++|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 36899999999999999888899999998877778889999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----CCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-----TPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~ 529 (663)
++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 93 ~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 166 (268)
T 3sxs_A 93 YLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166 (268)
T ss_dssp HHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred HHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence 997532 24899999999999999999999998 9999999999999999999999999998765432 123
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+...... . .+..
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~~~---~--------~~~~ 229 (268)
T 3sxs_A 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT------NSEVVLKVSQGHRL---Y--------RPHL 229 (268)
T ss_dssp CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTTCCC---C--------CCTT
T ss_pred cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC------hHHHHHHHHcCCCC---C--------CCCc
Confidence 4556999999988888999999999999999999 999996432 12222222221110 0 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
....+.+++.+|++.||++|||++|++++|+.+.+..
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 2346788999999999999999999999999997764
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.1e-41 Score=356.17 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=202.6
Q ss_pred hcccccccceEEEEEEe--------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVL--------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
.+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++.+ +||||++++++|.+.+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 46899999999999985 2456899999976532 235789999999999 899999999999999999999
Q ss_pred EEccCCCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 444 YDYLTMGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
|||+++|+|.+++..... .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~k 243 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMK 243 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhEEECCCCCEE
Confidence 999999999999976432 11345899999999999999999999998 99999999999999999999
Q ss_pred EeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 585 (663)
|+|||+++....... ..++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......
T Consensus 244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~------~~~~~~ 317 (370)
T 2psq_A 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFKL 317 (370)
T ss_dssp ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHH
T ss_pred EccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH
Confidence 999999986654321 224567999999998899999999999999999999 9999965322 112222
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
+... ... ..+.....++.+++.+||+.||++|||+.|++++|+++..
T Consensus 318 ~~~~-~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 318 LKEG-HRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHTT-CCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcC-CCC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2111 110 1112234468889999999999999999999999998754
No 29
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.7e-41 Score=366.37 Aligned_cols=249 Identities=23% Similarity=0.422 Sum_probs=207.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||+||+|.+.++..||||+++......+.|.+|+.+++.++||||+++++++. .+..++||||+++|+|.+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~ 271 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHH
Confidence 4689999999999999988999999999877677889999999999999999999999986 667899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~~ 529 (663)
+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 272 ~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 346 (454)
T 1qcf_A 272 FLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346 (454)
T ss_dssp HHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSS
T ss_pred HHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCc
Confidence 997532 124789999999999999999999998 999999999999999999999999999876542 2223
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||++....++.++|||||||++|||++ |+.||.... .......+..... ...+..
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~~-----------~~~~~~ 409 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRALERGYR-----------MPRPEN 409 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHTCC-----------CCCCTT
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC-----------CCCCCC
Confidence 4567999999988889999999999999999999 999996532 2222222222111 111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.+.++.+++.+||+.||++|||+++|++.|+++.....
T Consensus 410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 34578889999999999999999999999999876543
No 30
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.8e-40 Score=342.51 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=205.6
Q ss_pred ccCHHHHHHHhh---------------cccccccceEEEEEEec-CCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCC
Q 006055 364 VFDLEDLLRASA---------------EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHEN 426 (663)
Q Consensus 364 ~~~~~~l~~~~~---------------~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~n 426 (663)
.++.+++..++. +.||+|+||.||+|... +|+.||||++... ....+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 467777766652 47999999999999965 7999999998755 344677899999999999999
Q ss_pred cccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc
Q 006055 427 LVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT 506 (663)
Q Consensus 427 iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~ 506 (663)
|+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLT 175 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEC
Confidence 999999999999999999999999999998742 4899999999999999999999998 99999999999999
Q ss_pred CCCceEEeccccccccCCC----CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHH
Q 006055 507 KSYEARVSDFGLAHLVGPS----STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRW 582 (663)
Q Consensus 507 ~~~~~kl~Dfg~a~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~ 582 (663)
.++.+||+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.||.... ....
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~------~~~~ 249 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------PVQA 249 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHH
T ss_pred CCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHH
Confidence 9999999999999876543 22357788999999999899999999999999999999999996432 2222
Q ss_pred HHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 583 VQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+... ..... .........+.+++.+|+..||++|||++|++++
T Consensus 250 ~~~~~~~-~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDS-PPPKL--------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHS-SCCCC--------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcC-CCCCc--------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2222211 11110 0111223467788889999999999999999985
No 31
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-40 Score=340.05 Aligned_cols=246 Identities=23% Similarity=0.340 Sum_probs=203.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||+||++...++..||||+++......+++.+|++++..++||||+++++++.+....++||||+++|+|.+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 46899999999999999889999999998877778899999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~~ 529 (663)
++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 109 ~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (283)
T 3gen_A 109 YLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182 (283)
T ss_dssp HHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTT
T ss_pred HHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCc
Confidence 997532 24899999999999999999999998 999999999999999999999999999866442 2233
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+...... .....
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~~~~~~~-----------~~~~~ 245 (283)
T 3gen_A 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQGLRL-----------YRPHL 245 (283)
T ss_dssp SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTTCCC-----------CCCTT
T ss_pred cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC------hhHHHHHHhcccCC-----------CCCCc
Confidence 5567999999988889999999999999999998 999996532 12222222221110 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
....+.+++.+||+.||++|||++|++++|+++.+
T Consensus 246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 23467889999999999999999999999998754
No 32
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.4e-41 Score=345.57 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhc--CCCCCcccceEEEEec----CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGA--VNHENLVPLRAYYYSM----DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~lv~ey~~ 448 (663)
.+.||+|+||+||+|.. +|+.||||++.... ...+..|.+++.. ++||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 46899999999999988 59999999986543 4455556666555 8999999999997653 34789999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH--------AQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|+|.++++.. .+++..+..++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+++
T Consensus 90 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 90 MGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp TCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999642 4899999999999999999999 776 9999999999999999999999999997
Q ss_pred ccCCCC--------CCCCCccccCccccCCC------CCCCcchhhhHHHHHHHHHhC----------CCCCccccCCCC
Q 006055 521 LVGPSS--------TPNRVAGYRAPEVTDPC------KVSQKADVYSFGVLLLELLTG----------KAPTHALLNEEG 576 (663)
Q Consensus 521 ~~~~~~--------~~~~~~~y~aPE~~~~~------~~~~~~Dv~slGvvl~elltg----------~~p~~~~~~~~~ 576 (663)
...... ...++..|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~- 240 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND- 240 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS-
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC-
Confidence 654332 22577889999999876 344689999999999999999 77876543222
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
..... .......... .+.............++.+++.+||+.||++|||++||++.|+++
T Consensus 241 ~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFED-MRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhh-hhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11212 2222111111 111111112335667899999999999999999999999999986
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.6e-41 Score=348.46 Aligned_cols=238 Identities=20% Similarity=0.303 Sum_probs=198.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++......++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 36899999999999995 68999999999765433 356889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---T 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 527 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 100 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 100 EVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 9999997532 4899999999999999999999998 9999999999999999999999999998765432 3
Q ss_pred CCCCccccCccccCCCCCC-CcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 PNRVAGYRAPEVTDPCKVS-QKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||++.+..+. .++||||+||++|||++|+.||... +.......+...... .+
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~------------~p 234 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ------NLKELRERVLRGKYR------------IP 234 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------CC
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCC------------CC
Confidence 4578889999999887764 7899999999999999999999642 333333333332211 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|+..||++|||++|++++
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1123457788899999999999999999984
No 34
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=8e-40 Score=338.53 Aligned_cols=272 Identities=32% Similarity=0.517 Sum_probs=216.7
Q ss_pred CcccCHHHHHHHhh-----------cccccccceEEEEEEecCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcCCCC
Q 006055 362 ARVFDLEDLLRASA-----------EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAVNHE 425 (663)
Q Consensus 362 ~~~~~~~~l~~~~~-----------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~ 425 (663)
...|+..++..++. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|+.+++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34678888887762 6799999999999987 58999999986532 2246789999999999999
Q ss_pred CcccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE
Q 006055 426 NLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL 505 (663)
Q Consensus 426 niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill 505 (663)
||+++++++.+.+..++||||+++|+|.+++..... ..++++..+..++.|++.||.|||+.+ |+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEE
Confidence 999999999999999999999999999999974321 345899999999999999999999998 9999999999999
Q ss_pred cCCCceEEeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCCh
Q 006055 506 TKSYEARVSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDL 579 (663)
Q Consensus 506 ~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~ 579 (663)
+.++.+||+|||+++...... ...++..|+|||.+.+ .++.++||||||+++|+|++|+.||....... .+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~ 243 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LL 243 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH--HH
Confidence 999999999999998765422 2346778999999876 47889999999999999999999997654322 22
Q ss_pred HHHHHHHHhhcc-cccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 580 PRWVQSIVKDEW-TSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 580 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..+......... ....++... ..........+.+++.+|++.||++|||++||+++|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222222221111 111122111 12345567789999999999999999999999999999864
No 35
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=348.85 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=201.7
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... .+..||||.++... ...+.+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 468999999999999963 45569999997642 234678999999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.++++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 134 NGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp TCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred CCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 999999997543 35899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.....
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~~~~~~~--------- 272 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT------NRDVISSVEEGYR--------- 272 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHHHHTTCC---------
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHcCCC---------
Confidence 123456999999988889999999999999999999 999996532 1222222222111
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.........++.+++.+||..||++|||+.||++.|+++....
T Consensus 273 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 273 --LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred --CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 1111223456888999999999999999999999999986543
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=350.52 Aligned_cols=239 Identities=23% Similarity=0.335 Sum_probs=193.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|.. .+|+.||||++..... ....+.+|+++++.++||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 46899999999999994 6799999999876532 23568899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 95 L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 167 (347)
T 3zgw_A 95 LFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167 (347)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence 999997533 4899999999999999999999998 9999999999999999999999999987654332
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..+ +.++||||+||++|||++|+.||... +.......+...... .
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~~------------~ 229 (347)
T 3zgw_A 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD------NVMALYKKIMRGKYD------------V 229 (347)
T ss_dssp ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCC------------C
T ss_pred ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCC------------C
Confidence 2346788999999988775 88999999999999999999999642 333334443333211 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+.....++.+++.+|+..||++|||++|++++-
T Consensus 230 p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 230 PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 111233567888899999999999999999863
No 37
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.5e-40 Score=340.27 Aligned_cols=259 Identities=20% Similarity=0.292 Sum_probs=205.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+.++..++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 36899999999999994 5689999999854322 235788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... ++++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 96 PTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 99999997532 5899999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .............. ... ..
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~~~----~~~---~~ 235 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIAIKHIQDSVP----NVT---TD 235 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC------HHHHHHHHHSSCCC----CHH---HH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhhccCC----Ccc---hh
Confidence 1236788999999999889999999999999999999999996532 12222222222111 000 00
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhhCCCCCCCCCCCC
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRP-SMSEVIKRIEELHPSSTQGHHGLQ 653 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RP-t~~ev~~~L~~~~~~~~~~~~~~~ 653 (663)
.....+..+.+++.+|++.||++|| +++++.+.|+.+............
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~~ 285 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYE 285 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCCC
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchhh
Confidence 1112345688899999999999998 999999999998766555444443
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=340.96 Aligned_cols=270 Identities=18% Similarity=0.261 Sum_probs=208.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|... +|+.||||+++... ...+.+.+|+++++.++||||+++++++.... ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 368999999999999954 58999999997542 34577889999999999999999999998765 67999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE----cCCCceEEeccccccccCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL----TKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill----~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999986432 234899999999999999999999998 9999999999999 78888999999999877554
Q ss_pred C---CCCCCccccCccccC--------CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 526 S---TPNRVAGYRAPEVTD--------PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 526 ~---~~~~~~~y~aPE~~~--------~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
. ...++..|+|||++. +..++.++|||||||++|||++|+.||....... .....+..+........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSGA 247 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCTTC
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCccc
Confidence 3 234678899999875 5678899999999999999999999997543221 22333333333221110
Q ss_pred c---cc---------hhhh-cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCC
Q 006055 595 V---FD---------LELL-RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHH 650 (663)
Q Consensus 595 ~---~d---------~~~~-~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~ 650 (663)
+ .. .... ...........+.+++.+|++.||++|||++|++++..+........+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~~~~~ 316 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNSHHH 316 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-------
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCCcccc
Confidence 0 00 0000 1122356667888999999999999999999999999987665544443
No 39
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-40 Score=344.91 Aligned_cols=244 Identities=23% Similarity=0.346 Sum_probs=202.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||++.. .+++.||+|.++........+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 46799999999999995 46899999999866555677899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC--CCceEEeccccccccCCCCC---C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK--SYEARVSDFGLAHLVGPSST---P 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~---~ 528 (663)
+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++....... .
T Consensus 90 ~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 90 ERINTSA----FELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 9997532 35899999999999999999999998 999999999999987 78999999999988765432 2
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+++.|+|||++.+..++.++|||||||++|||++|+.||.... ....+..+...... ++... ...
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~---~~~~~-----~~~ 229 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYT---FDEEA-----FKE 229 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---CCHHH-----HTT
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCCC---CChhh-----hcc
Confidence 36778999999998888999999999999999999999996532 23333333333211 11110 012
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
...++.+++.+|+..||++|||+.|++++-
T Consensus 230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 230 ISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 234678889999999999999999999854
No 40
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-40 Score=365.65 Aligned_cols=248 Identities=26% Similarity=0.402 Sum_probs=206.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|.+. ++..||||.++......+.|.+|+.++++++||||++++++|......++||||+++|+|.
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~ 304 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHH
Confidence 468999999999999965 4899999999877667888999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----CC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-----TP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~ 528 (663)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 305 ~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 379 (495)
T 1opk_A 305 DYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379 (495)
T ss_dssp HHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTC
T ss_pred HHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCC
Confidence 9997543 245899999999999999999999998 9999999999999999999999999998765432 12
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ...... +..... ...+.
T Consensus 380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~------~~~~~~-~~~~~~----------~~~~~ 442 (495)
T 1opk_A 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYEL-LEKDYR----------MERPE 442 (495)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHH-HHTTCC----------CCCCT
T ss_pred cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHH-HHcCCC----------CCCCC
Confidence 23567999999988889999999999999999999 9999965322 111111 111111 01112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
....++.+++.+||+.||++|||+.||++.|+.+...
T Consensus 443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 2345688899999999999999999999999988644
No 41
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-40 Score=361.19 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=203.0
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|.+.++..||||+++......+.|.+|++++++++||||+++++++.+ +..++||||+++|+|.+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~ 267 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 267 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHH
Confidence 46899999999999999888899999998776677889999999999999999999999866 67899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----CCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-----TPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~ 529 (663)
+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 268 ~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 342 (452)
T 1fmk_A 268 FLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342 (452)
T ss_dssp HHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCc
Confidence 997432 134899999999999999999999998 9999999999999999999999999998765432 122
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++|||||||++|||++ |+.||.... .......+..... ...+..
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~~-----------~~~~~~ 405 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERGYR-----------MPCPPE 405 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTTCC-----------CCCCTT
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC-----------CCCCCC
Confidence 4567999999988889999999999999999999 999996532 2222222222111 011123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.+..+.+++.+||+.||++|||++++++.|+++.....
T Consensus 406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 34568889999999999999999999999999876543
No 42
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.1e-40 Score=332.68 Aligned_cols=248 Identities=22% Similarity=0.311 Sum_probs=202.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... |+.||||+++..... .+.+.+|+.+++.++||||+++++++.+. ...++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 468999999999999986 899999999765433 45789999999999999999999999877 678999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|+|.++++... ...+++..+..++.|++.||.|||+.+++|+||||||+||+++.++.++|+|||++..... ....
T Consensus 94 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~~~ 169 (271)
T 3kmu_A 94 GSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGRM 169 (271)
T ss_dssp CBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TTCB
T ss_pred CcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-cCcc
Confidence 99999998643 2358999999999999999999999877799999999999999999999999998765432 3345
Q ss_pred CCccccCccccCCCCCCC---cchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTDPCKVSQ---KADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~---~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||.+.+..++. ++||||||+++|||++|+.||.... ................ .+
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~----------~~ 233 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS------NMEIGMKVALEGLRPT----------IP 233 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC------HHHHHHHHHHSCCCCC----------CC
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC------hHHHHHHHHhcCCCCC----------CC
Confidence 788899999998765444 7999999999999999999996432 2222222222221111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.....++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1233468888999999999999999999999999865
No 43
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.5e-40 Score=342.72 Aligned_cols=238 Identities=24% Similarity=0.301 Sum_probs=198.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|.. .+|+.||+|+++.. ......+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999995 46999999999753 23456788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS---- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~---- 525 (663)
|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 90 GELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 99999997532 4899999999999999999999998 999999999999999999999999999864332
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+...... .
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~~------------~ 224 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILMEEIR------------F 224 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------C
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC------CHHHHHHHHHcCCCC------------C
Confidence 2234678899999999999999999999999999999999999642 222333333322110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
+.....++.+++.+|+..||++|| +++|+++|
T Consensus 225 p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112234677888899999999999 89999876
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.6e-40 Score=345.44 Aligned_cols=241 Identities=23% Similarity=0.343 Sum_probs=199.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+.++..++||||+++++++.+....++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 46899999999999995 4699999999875422 357899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC----ceEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY----EARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~----~~kl~Dfg~a~~~ 522 (663)
+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||+++++ .+||+|||+++..
T Consensus 97 ~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 97 VSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp CCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999999753 25899999999999999999999998 99999999999998877 7999999999877
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ...+++.|+|||++.+..++.++|||||||++|+|++|..||... +.......+...... ++..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~------~~~~~~~~i~~~~~~---~~~~ 240 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETLANITAVSYD---FDEE 240 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHTTCCC---CCHH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCC---CCch
Confidence 5542 345788899999999989999999999999999999999999653 222333333322111 1111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
. + .....++.+++.+|+..||++|||++|+++
T Consensus 241 ~--~---~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 241 F--F---SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp H--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h--c---cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 0 112345778888999999999999999987
No 45
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.6e-40 Score=332.39 Aligned_cols=247 Identities=25% Similarity=0.393 Sum_probs=207.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|...+++.||+|.+.......+.+.+|+++++.++||||+++++++.+.+..++||||+++++|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 46899999999999998889999999998877777889999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~~ 529 (663)
++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 93 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 166 (267)
T 3t9t_A 93 YLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166 (267)
T ss_dssp HHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence 997543 35899999999999999999999998 999999999999999999999999999876432 2233
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++||||||+++|||++ |+.||... +.......+...... ..+..
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~i~~~~~~-----------~~~~~ 229 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEVVEDISTGFRL-----------YKPRL 229 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTTCCC-----------CCCTT
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC------CHHHHHHHHhcCCcC-----------CCCcc
Confidence 5567999999988889999999999999999999 89998642 222223222222110 00111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
....+.+++.+|+..||++|||++|++++|+++.+.
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 234678889999999999999999999999998653
No 46
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2e-40 Score=352.42 Aligned_cols=247 Identities=24% Similarity=0.415 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... ++..||||.++... ...+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 468999999999999854 57789999997542 234679999999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTP 528 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 528 (663)
+|+|.++++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 130 ~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 130 NGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp TCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 999999997542 35899999999999999999999998 999999999999999999999999999876543211
Q ss_pred -------CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 529 -------NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 529 -------~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
.++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.....
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------~~~~~~~i~~~~~--------- 268 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS------NQDVIKAVDEGYR--------- 268 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------HHHHHHHHHTTEE---------
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC---------
Confidence 12456999999998889999999999999999998 999996432 1222222221111
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........++.+++.+||+.||++||+++||++.|+++...
T Consensus 269 --~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 --LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 111122345788999999999999999999999999987543
No 47
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9e-41 Score=356.01 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=200.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|... +++.||||.++.... ....+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 478999999999999965 799999999875422 13468899999999999999999999999899999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.++++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 199 L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 199 FLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp HHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 999997532 24899999999999999999999998 9999999999999999999999999998654321
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+..|+|||.+.+..++.++|||||||++|||++ |..||..... .. +...+..... ..
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~------~~-~~~~~~~~~~----------~~ 335 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN------QQ-TREFVEKGGR----------LP 335 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH------HH-HHHHHHTTCC----------CC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcCCC----------CC
Confidence 1123456999999988889999999999999999998 9999965321 11 1112211110 01
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.+...+.++.+++.+||+.||++|||++++++.|+++..
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 112234468889999999999999999999999998753
No 48
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-40 Score=344.18 Aligned_cols=254 Identities=26% Similarity=0.353 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhh--cCCCCCcccceEEEEec----CccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVG--AVNHENLVPLRAYYYSM----DEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~----~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... |+.||||++.... ...+..|.+++. .++||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 9999999986543 333444445444 45999999999999887 67899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc--------CCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ--------GPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~--------~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|+|.++++.. .+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA--IAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC--EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--EEecccchHHEEECCCCCEEEEeCCCce
Confidence 99999999753 489999999999999999999988 6 9999999999999999999999999997
Q ss_pred ccCCCC--------CCCCCccccCccccCCCCCCCc------chhhhHHHHHHHHHhC----------CCCCccccCCCC
Q 006055 521 LVGPSS--------TPNRVAGYRAPEVTDPCKVSQK------ADVYSFGVLLLELLTG----------KAPTHALLNEEG 576 (663)
Q Consensus 521 ~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~------~Dv~slGvvl~elltg----------~~p~~~~~~~~~ 576 (663)
...... ...++..|+|||++.+.....+ +|||||||++|||++| +.||.......
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~- 269 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD- 269 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS-
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC-
Confidence 664432 2346788999999988766665 9999999999999999 55554432221
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
... ............ .+.........+...++.+++.+||+.||++|||+.||+++|+.+.+..
T Consensus 270 ~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred Cch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111 112222111111 1111111122356778999999999999999999999999999986653
No 49
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.5e-40 Score=359.55 Aligned_cols=246 Identities=26% Similarity=0.415 Sum_probs=202.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecC-ccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMD-EKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|... |+.||||.++... ..+.|.+|+.++++++||||+++++++.+.. ..++||||+++|+|.
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 468999999999999986 8899999998654 4567999999999999999999999988765 689999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCc
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVA 532 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~ 532 (663)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...++.
T Consensus 276 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 350 (450)
T 1k9a_A 276 DYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350 (450)
T ss_dssp HHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCT
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCc
Confidence 9998543 234789999999999999999999998 9999999999999999999999999998654332 234566
Q ss_pred cccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHH
Q 006055 533 GYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMV 611 (663)
Q Consensus 533 ~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 611 (663)
.|+|||.+.+..++.++|||||||++|||++ |+.||...... . ....+... .. ...+...+.
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~---~~~~i~~~-~~----------~~~p~~~~~ 413 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---D---VVPRVEKG-YK----------MDAPDGCPP 413 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT---T---HHHHHHTT-CC----------CCCCTTCCH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---H---HHHHHHcC-CC----------CCCCCcCCH
Confidence 7999999999899999999999999999998 99999754322 1 12222211 11 111123345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 612 QLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 612 ~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 788899999999999999999999999988644
No 50
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.3e-40 Score=334.11 Aligned_cols=244 Identities=27% Similarity=0.431 Sum_probs=190.0
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... |+.||||+++... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 368999999999999976 8999999986542 2246789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-CcceecCCCCCCEEEcC--------CCceEEecccccc
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG-PNVSHGNIKSSNILLTK--------SYEARVSDFGLAH 520 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-~~iiHrdlk~~Nill~~--------~~~~kl~Dfg~a~ 520 (663)
++|.+++... .+++..+..++.|++.||.|||+.+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 91 ~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 91 GPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 9999999642 4899999999999999999999997 45899999999999986 6789999999998
Q ss_pred ccCCCC--CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 521 LVGPSS--TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 521 ~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...... ...++..|+|||.+.+..++.++||||||+++|||++|+.||.... ...............
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~----- 233 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID------GLAVAYGVAMNKLAL----- 233 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHHTSCCCC-----
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHhhhcCCCCC-----
Confidence 765432 2456788999999988889999999999999999999999996532 111122222111111
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.........+.+++.+|++.||++|||+.|++++|+++
T Consensus 234 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 -----PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11122334688899999999999999999999999864
No 51
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.2e-40 Score=343.73 Aligned_cols=252 Identities=17% Similarity=0.171 Sum_probs=202.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||+||+|.. .+|+.||||.+..... ...+.+|+++++.+ +||||+++++++......++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 36899999999999994 6799999999875432 34688999999999 9999999999999999999999999 8999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-----eEEeccccccccCCCC-
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE-----ARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~-----~kl~Dfg~a~~~~~~~- 526 (663)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++......
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 99998542 35899999999999999999999998 999999999999999887 9999999998654322
Q ss_pred ----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 527 ----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 527 ----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+..+.......
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~---~~~~~~~~~i~~~~~~~--- 239 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA---DTLKERYQKIGDTKRAT--- 239 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---SSHHHHHHHHHHHHHHS---
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc---ccHHHHHHHHHhhhccC---
Confidence 23467889999999999999999999999999999999999976432 22333333222111100
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
..... ....+ ++.+++..|++.||.+||++++|++.|+++....
T Consensus 240 ~~~~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIEVL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp CHHHH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00000 00122 7888999999999999999999999998875443
No 52
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.2e-40 Score=340.76 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=198.0
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey 446 (663)
.+.||+|+||+||+|.+ .+++.||||++..... ..+.+.+|+++++.++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 46899999999999984 3689999999976532 246789999999999999999999998653 558999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 95 LPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 99999999997643 24899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC-------CCC--ChHHHHHHHHhhc
Q 006055 527 T-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE-------EGV--DLPRWVQSIVKDE 590 (663)
Q Consensus 527 ~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~-------~~~--~~~~~~~~~~~~~ 590 (663)
. ..++..|+|||.+.+..++.++||||||+++|||++|..|+...... ... .....+.......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence 1 22445699999998888999999999999999999999998643210 000 0000111111111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
. ....+...+.++.+++.+||+.||++|||++|+++.|+++...
T Consensus 249 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 249 G----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0 1111223445788899999999999999999999999998654
No 53
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=346.12 Aligned_cols=253 Identities=22% Similarity=0.370 Sum_probs=203.5
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... +++.||||.++.... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 468999999999999964 358999999976432 246789999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC
Q 006055 447 LTMGSLSALLHGNKGA-------------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~ 507 (663)
+++|+|.+++...... ....+++..++.++.||+.||.|||+++ |+||||||+||+++.
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGE 209 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEECC
Confidence 9999999999764211 1256899999999999999999999998 999999999999999
Q ss_pred CCceEEeccccccccCCC------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChH
Q 006055 508 SYEARVSDFGLAHLVGPS------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLP 580 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~ 580 (663)
++.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~ 283 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HE 283 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HH
T ss_pred CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC------hH
Confidence 999999999999765332 22345677999999988889999999999999999999 999996432 22
Q ss_pred HHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 581 RWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.....+..... .. .+.....++.+++.+||+.||++|||+.|++++|+++.+...
T Consensus 284 ~~~~~~~~~~~-~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 284 EVIYYVRDGNI-LA----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp HHHHHHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred HHHHHHhCCCc-CC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 22222222211 10 111233468889999999999999999999999999977643
No 54
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=350.90 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=201.3
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||+||+|.+. +++.||||+++... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 468999999999999843 46789999997542 2345788999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKG--AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~ 521 (663)
+++|+|.++++.... .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 999999999975432 12345899999999999999999999998 99999999999999555 599999999975
Q ss_pred cCCC------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPS------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
.... ....++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+......
T Consensus 234 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~------~~~~~~~i~~~~~~-- 305 (367)
T 3l9p_A 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTSGGRM-- 305 (367)
T ss_dssp HHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTTCCC--
T ss_pred cccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCC--
Confidence 4221 12235677999999988889999999999999999998 999996532 22223222222111
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........+.+++.+||+.||++|||+.||+++|+.+...
T Consensus 306 ---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 306 ---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 01112334678899999999999999999999999887544
No 55
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=347.61 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=203.3
Q ss_pred hcccccccceEEEEEEec--------CCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE--------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
.++||+|+||+||+|... .+..||||+++.... ..+.+.+|+++++.+ +||||+++++++...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 468999999999999842 346899999976532 236788999999999 999999999999999999999
Q ss_pred EEccCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 444 YDYLTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
|||+++|+|.+++...... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceEEEcCCCcEE
Confidence 9999999999999764321 1245899999999999999999999998 99999999999999999999
Q ss_pred EeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 585 (663)
|+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||... +.......
T Consensus 232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~------~~~~~~~~ 305 (382)
T 3tt0_A 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEELFKL 305 (382)
T ss_dssp ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHH
T ss_pred EcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHH
Confidence 99999998765432 1234567999999999999999999999999999999 99999643 22223322
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+...... . .......++.+++.+||+.||++|||++||+++|+++...
T Consensus 306 ~~~~~~~-~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 306 LKEGHRM-D----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp HHTTCCC-C----------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCC-C----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 2222111 0 1112334688899999999999999999999999987543
No 56
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-39 Score=332.98 Aligned_cols=247 Identities=28% Similarity=0.435 Sum_probs=196.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC--H------HHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS--E------REFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~------~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||+||+|.. .+++.||||++...... . +.+.+|+++++.++||||+++++++.+. .++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--TEEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--CeEEEE
Confidence 36899999999999995 57999999998654221 1 6789999999999999999999998543 479999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-----eEEecccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE-----ARVSDFGLAH 520 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~-----~kl~Dfg~a~ 520 (663)
|+++|+|.+.+.... ..+++..+..++.|++.||.|||+.+++|+||||||+||+++.++. +||+|||+++
T Consensus 102 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp CCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred ecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 999999999886533 3589999999999999999999999766999999999999988776 9999999998
Q ss_pred ccCCCC-CCCCCccccCccccC--CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 521 LVGPSS-TPNRVAGYRAPEVTD--PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 521 ~~~~~~-~~~~~~~y~aPE~~~--~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...... ...++..|+|||.+. ...++.++||||||+++|||++|+.||...... ................
T Consensus 178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~--- 250 (287)
T 4f0f_A 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG----KIKFINMIREEGLRPT--- 250 (287)
T ss_dssp CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC----HHHHHHHHHHSCCCCC---
T ss_pred cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc----HHHHHHHHhccCCCCC---
Confidence 654432 345778899999984 455788999999999999999999999753321 1222222222211111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhh
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEEL 641 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~ 641 (663)
.......++.+++.+||+.||++|||++|+++.|+++
T Consensus 251 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 -------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1122344688899999999999999999999999874
No 57
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.7e-40 Score=337.94 Aligned_cols=251 Identities=26% Similarity=0.383 Sum_probs=197.4
Q ss_pred hcccccccceEEEEEEec-CC-------cEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG-------TIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||+||+|... ++ ..||+|.+... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 468999999999999844 34 57999998755 3446789999999999999999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc--------eEEeccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE--------ARVSDFG 517 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~--------~kl~Dfg 517 (663)
|+++|+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++. +||+|||
T Consensus 93 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 999999999998643 34899999999999999999999998 999999999999998887 9999999
Q ss_pred cccccCCCCCCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 518 LAHLVGPSSTPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 518 ~a~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
++..........++..|+|||.+.+ ..++.++||||||+++|||++|..|+.... +...............
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~--- 238 (289)
T 4fvq_A 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLP--- 238 (289)
T ss_dssp SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCC---
T ss_pred ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCC---
Confidence 9976655444446778999999987 678999999999999999999655543221 1111111111110000
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCC
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGH 649 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 649 (663)
.....++.+++.+||+.||++|||++|++++|+++........
T Consensus 239 ----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~ 281 (289)
T 4fvq_A 239 ----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281 (289)
T ss_dssp ----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred ----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence 0112357788999999999999999999999999977654433
No 58
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=338.93 Aligned_cols=242 Identities=21% Similarity=0.339 Sum_probs=198.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||.++... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 57899999999999995 468999999986542 1367899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC----ceEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY----EARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~----~~kl~Dfg~a~~~ 522 (663)
+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+++..
T Consensus 96 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 96 VAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp CCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 9999999999753 35899999999999999999999998 99999999999999887 7999999999876
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ...++..|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... +...
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~---~~~~ 239 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYE---FEDE 239 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHTCCC---CCHH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHhcCCC---cCcc
Confidence 5432 3447788999999998899999999999999999999999996432 22222222221110 0111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .......+.+++.+|+..||++|||++|++++
T Consensus 240 ~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 240 Y-----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp H-----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred c-----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 01123467788999999999999999999984
No 59
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=336.37 Aligned_cols=239 Identities=22% Similarity=0.326 Sum_probs=189.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---------------------------HHHHHHHHHHhhcCCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---------------------------EREFKDKIEGVGAVNHEN 426 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---------------------------~~~~~~e~~~l~~l~h~n 426 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 46899999999999995 56899999998654211 245889999999999999
Q ss_pred cccceEEEEe--cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEE
Q 006055 427 LVPLRAYYYS--MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNIL 504 (663)
Q Consensus 427 iv~l~~~~~~--~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nil 504 (663)
|+++++++.+ ....++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil 169 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLL 169 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEE
Confidence 9999999987 4578999999999999887643 35899999999999999999999998 999999999999
Q ss_pred EcCCCceEEeccccccccCCCC----CCCCCccccCccccCCCC---CCCcchhhhHHHHHHHHHhCCCCCccccCCCCC
Q 006055 505 LTKSYEARVSDFGLAHLVGPSS----TPNRVAGYRAPEVTDPCK---VSQKADVYSFGVLLLELLTGKAPTHALLNEEGV 577 (663)
Q Consensus 505 l~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~ 577 (663)
++.++.+||+|||+++...... ...++..|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------ 243 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE------ 243 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS------
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc------
Confidence 9999999999999998765432 345778899999997765 367899999999999999999999642
Q ss_pred ChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 578 DLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.......+..... . .+.......++.+++.+|+..||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 244 RIMCLHSKIKSQAL-E---------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SHHHHHHHHHHCCC-C---------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cHHHHHHHHhcccC-C---------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 22222222222111 0 01111223467888999999999999999999864
No 60
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-39 Score=337.05 Aligned_cols=253 Identities=25% Similarity=0.327 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|...+|+.||||++...... ...+.+|+++++.++||||+++++++.+....++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 3689999999999999888999999998754322 36788999999999999999999999999999999999985 8
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 105 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 105 LKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp HHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 888886533 35899999999999999999999998 9999999999999999999999999998765332 2
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch---hhh--
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL---ELL-- 601 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~-- 601 (663)
..++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+...........+... ...
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---QLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---HHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 346778999999876 568999999999999999999999997643322 22222222211111110000 000
Q ss_pred ------cccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 602 ------RYQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 602 ------~~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... ......++.+++.+|+..||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 01123467889999999999999999999983
No 61
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=8.7e-40 Score=336.62 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=207.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.++..+ +|+|++++++++.+....++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 36799999999999994 679999999986543 234578899999999 7999999999999999999999999 9999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-----eEEeccccccccCCCC-
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE-----ARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~-----~kl~Dfg~a~~~~~~~- 526 (663)
.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||+++......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 99998543 34899999999999999999999998 999999999999987776 9999999998764432
Q ss_pred ----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccccc
Q 006055 527 ----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVF 596 (663)
Q Consensus 527 ----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||....... .......+........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~-- 241 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT---NKQKYERIGEKKQSTP-- 241 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC---HHHHHHHHHHHHHHSC--
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc---cHHHHHHHHhhccCcc--
Confidence 2346778999999999999999999999999999999999997643221 1222222211110000
Q ss_pred chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCC
Q 006055 597 DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGLQP 654 (663)
Q Consensus 597 d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~ 654 (663)
.... ....+.++.+++.+||+.||++||++++|++.|+++............+
T Consensus 242 ~~~~-----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~d 294 (298)
T 1csn_A 242 LREL-----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFD 294 (298)
T ss_dssp HHHH-----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCG
T ss_pred HHHH-----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccc
Confidence 0000 0122457888999999999999999999999999987665544444433
No 62
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.1e-40 Score=342.32 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=181.4
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
+.||+|+||+||+|.. .+|+.||||++... ....+.+|+.++..++ ||||+++++++.+....++||||+++|+|.
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 6799999999999995 46899999998653 3567889999999997 999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccccCCCC----
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~---- 526 (663)
+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 95 ~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 95 ERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp HHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 9998643 5899999999999999999999998 99999999999998766 79999999998765432
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC-CChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG-VDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||........ .........+...... +.. ..
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---~~~-----~~ 239 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---FEG-----EA 239 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC---CCS-----HH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC---CCc-----cc
Confidence 23457789999999999999999999999999999999999976433211 2223333333222111 000 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..||++|||++|++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 11234567889999999999999999999873
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=336.84 Aligned_cols=238 Identities=23% Similarity=0.315 Sum_probs=199.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||+|.++... .....+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 46899999999999995 479999999987542 3356788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 91 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 91 GELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp CBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 99999997533 4899999999999999999999998 9999999999999999999999999998765432 34
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+...... .+..
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~------------~p~~ 225 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTYEKILNAELR------------FPPF 225 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHCCCC------------CCTT
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCC------------CCCC
Confidence 5788899999999999999999999999999999999999642 223333333332210 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
...++.+++.+|+..||++|| +++|+++|
T Consensus 226 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 234677888899999999999 89999865
No 64
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.3e-40 Score=342.65 Aligned_cols=245 Identities=23% Similarity=0.405 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEe-cCCc----EEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGT----IVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|.. .+++ +||+|.+... ....+.+.+|+.++++++||||++++++|.+. ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEec
Confidence 46899999999999994 3444 3688887643 23467899999999999999999999999865 478999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 99 PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp TTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 9999999997643 35899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..++.+|+|||++.+..++.++|||||||++|||++ |+.||......+ + ...+.....
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~----~~~~~~~~~-------- 237 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----SSILEKGER-------- 237 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H----HHHHHTTCC--------
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---H----HHHHHcCCC--------
Confidence 223557999999999999999999999999999999 999997543211 1 111111110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.........++.+++.+||+.||++||++.|++++|+.+..
T Consensus 238 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 --LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01112234468889999999999999999999999988754
No 65
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4e-40 Score=348.67 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=200.2
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCc-cEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDE-KLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~-~~lv~ 444 (663)
.+.||+|+||.||+|.+ .+++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+... .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 46899999999999973 3468999999976432 235689999999999 78999999999987655 89999
Q ss_pred EccCCCChhHhhccCCCC-------------------------------------------------------------C
Q 006055 445 DYLTMGSLSALLHGNKGA-------------------------------------------------------------G 463 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~-------------------------------------------------------------~ 463 (663)
||+++|+|.++++..... .
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 999999999999764321 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC------CCCCccccCc
Q 006055 464 RTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST------PNRVAGYRAP 537 (663)
Q Consensus 464 ~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aP 537 (663)
...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....... ..++..|+||
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeECh
Confidence 122899999999999999999999998 99999999999999999999999999986643321 2346679999
Q ss_pred cccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHH
Q 006055 538 EVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQL 616 (663)
Q Consensus 538 E~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 616 (663)
|++.+..++.++|||||||++|||++ |+.||...... ..+...+....... .+.....++.++
T Consensus 265 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~~l~~l 328 (359)
T 3vhe_A 265 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRMR----------APDYTTPEMYQT 328 (359)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHHTCCCC----------CCTTCCHHHHHH
T ss_pred hhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh------HHHHHHHHcCCCCC----------CCCCCCHHHHHH
Confidence 99988889999999999999999998 99999653221 12222222211111 111123467888
Q ss_pred HHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 617 AIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 617 ~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
+.+|++.||++|||++|++++|+++.+
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998754
No 66
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=346.75 Aligned_cols=242 Identities=26% Similarity=0.336 Sum_probs=195.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
++||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 5799999999999995 579999999997653 34567999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE--cCCCceEEeccccccccCCCC---CC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL--TKSYEARVSDFGLAHLVGPSS---TP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~---~~ 528 (663)
+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||+ ++++.+||+|||+++...... ..
T Consensus 175 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 175 DRIIDES----YNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp HHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 9886532 35899999999999999999999998 9999999999999 567889999999998776543 23
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.++.+|+|||++.+..++.++|||||||++|||++|+.||... +....+..+....+... . .....
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~------~~~~~~~~i~~~~~~~~--~------~~~~~ 314 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD------NDAETLNNILACRWDLE--D------EEFQD 314 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHTCCCSC--S------GGGTT
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhccCCCC--h------hhhcc
Confidence 4778899999999888999999999999999999999999653 22333444443322110 0 00112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...++.+++.+|+..||++|||++|++++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 23467888899999999999999999984
No 67
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=335.02 Aligned_cols=250 Identities=27% Similarity=0.419 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||+||+|... ++.||||.+... ...+.+.+|++++++++||||+++++++. +..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~ 88 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHH
Confidence 468999999999999986 889999998653 33567899999999999999999999875 45899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCcceecCCCCCCEEEcCCCc-eEEeccccccccCCC-CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA---QGPNVSHGNIKSSNILLTKSYE-ARVSDFGLAHLVGPS-STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~---~~~~iiHrdlk~~Nill~~~~~-~kl~Dfg~a~~~~~~-~~~~ 529 (663)
+++.... ...+++..++.++.|+++||.|||+ ++ |+||||||+||+++.++. +||+|||++...... ....
T Consensus 89 ~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (307)
T 2eva_A 89 VLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKA--LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164 (307)
T ss_dssp HHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSC--CCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCC--eecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence 9985431 2247889999999999999999999 55 999999999999998886 799999999766543 2345
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||++.+..++.++||||||+++|||++|+.||..... .............. . ......
T Consensus 165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~-~----------~~~~~~ 229 (307)
T 2eva_A 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG----PAFRIMWAVHNGTR-P----------PLIKNL 229 (307)
T ss_dssp CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS----SHHHHHHHHHTTCC-C----------CCBTTC
T ss_pred CCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc----cHHHHHHHHhcCCC-C----------Cccccc
Confidence 78889999999999999999999999999999999999975322 11111111111111 0 011122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
...+.+++.+|++.||++|||++|++++|+.+......
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 34678889999999999999999999999988665543
No 68
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.8e-39 Score=344.45 Aligned_cols=261 Identities=16% Similarity=0.183 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEecC------CcEEEEEEecCcccC------------HHHHHHHHHHhhcCCCCCcccceEEEEe
Q 006055 375 AEVLGKGTFGTAYKAVLEM------GTIVAVKRLKDVTIS------------EREFKDKIEGVGAVNHENLVPLRAYYYS 436 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~h~niv~l~~~~~~ 436 (663)
.+.||+|+||.||+|.... ++.||||++...... ...+..|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4689999999999998654 478999998654211 1223455666778899999999999876
Q ss_pred c----CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc--CCCc
Q 006055 437 M----DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT--KSYE 510 (663)
Q Consensus 437 ~----~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~--~~~~ 510 (663)
. ...++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEESSCTTC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEecCCCCe
Confidence 5 3479999999 999999997642 35899999999999999999999998 99999999999999 8899
Q ss_pred eEEeccccccccCCCC-----------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCCh
Q 006055 511 ARVSDFGLAHLVGPSS-----------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDL 579 (663)
Q Consensus 511 ~kl~Dfg~a~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~ 579 (663)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~~ 270 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--KY 270 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--HH
Confidence 9999999997654321 1237778999999999999999999999999999999999998533211 11
Q ss_pred HHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCC
Q 006055 580 PRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGH 649 (663)
Q Consensus 580 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 649 (663)
.......... .....++..+. ....+.++.+++..||..+|++||+++++++.|+++........
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 271 VRDSKIRYRE-NIASLMDKCFP----AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp HHHHHHHHHH-CHHHHHHHHSC----TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhh-hHHHHHHHhcc----cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 1111111111 11111111110 01224578889999999999999999999999998765544333
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.7e-40 Score=343.65 Aligned_cols=241 Identities=23% Similarity=0.286 Sum_probs=193.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 468999999999999954 79999999986542 224678899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 999997532 4899999999999999999999998 999999999999999999999999999765322
Q ss_pred CCCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 STPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....++..|+|||++.+..+ +.++|||||||++|||++|+.||....... ............ . .
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~~---~-------~ 229 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKEKKTY---L-------N 229 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-----HHHHHHHTTCTT---S-------T
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHHhccccc---C-------C
Confidence 23457788999999977665 778999999999999999999997543211 111111111100 0 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..||++|||++|++++
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111223467788999999999999999999885
No 70
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=363.14 Aligned_cols=249 Identities=27% Similarity=0.418 Sum_probs=206.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.++||+|+||.||+|.+.++..||||+++......+.|.+|+++++.++|+||+++++++.+ +..++||||+++|+|.+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~ 350 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 350 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence 46899999999999999888899999998776677889999999999999999999999866 67899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-----CCCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-----STPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-----~~~~ 529 (663)
+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 351 ~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 425 (535)
T 2h8h_A 351 FLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425 (535)
T ss_dssp HHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTT
T ss_pred HHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCc
Confidence 997432 134899999999999999999999998 999999999999999999999999999876532 1233
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++|||||||++|||++ |+.||.... ....+..+... .. ......
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~------~~~~~~~i~~~-~~----------~~~~~~ 488 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERG-YR----------MPCPPE 488 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC------HHHHHHHHHTT-CC----------CCCCTT
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-CC----------CCCCCC
Confidence 4567999999988889999999999999999999 999996532 22222222221 10 011122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
...++.+++.+||+.||++|||+++|++.|+++.....
T Consensus 489 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 34568889999999999999999999999999876543
No 71
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-39 Score=345.22 Aligned_cols=244 Identities=21% Similarity=0.278 Sum_probs=191.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||+||++... +++.||||++.......+.+.+|+.+++.++||||+++++++.+....++||||+++|+|.
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 468999999999999954 7999999999876655678899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc--eEEeccccccccCCC---CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE--ARVSDFGLAHLVGPS---STP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~--~kl~Dfg~a~~~~~~---~~~ 528 (663)
+++.... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++. +||+|||+++..... ...
T Consensus 105 ~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 105 ERICNAG-----RFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp HHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 9987532 4899999999999999999999998 999999999999987775 999999999754332 234
Q ss_pred CCCccccCccccCCCCCCCc-chhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQK-ADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~-~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.++..|+|||++.+..+..+ +|||||||++|||++|+.||...... ......+..+....... +...
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~ 245 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP--RDYRKTIQRILSVKYSI----------PDDI 245 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C--CCHHHHHHHHHTTCCCC----------CTTS
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhcCCCCC----------CCcC
Confidence 57888999999988777655 89999999999999999999754322 22333333333221100 0000
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..||++|||++|+++|
T Consensus 246 ~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 123467788899999999999999999987
No 72
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-39 Score=345.96 Aligned_cols=245 Identities=18% Similarity=0.299 Sum_probs=194.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||+||+|+. .+++.||||+++..... ...+..|..++..+ +||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 46899999999999995 46889999999765322 23477888888776 89999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 137 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 137 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 999999997533 4899999999999999999999998 999999999999999999999999999863222
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC--CChHHHHHHHHhhcccccccchhhhc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG--VDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+...+.....
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 279 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------- 279 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC----------
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc----------
Confidence 234578889999999999999999999999999999999999975432211 1112222222221111
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSM------SEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~------~ev~~~ 637 (663)
..+.....++.+++.+|+..||++||++ +|+++|
T Consensus 280 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 280 -RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred -CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0111223467788899999999999995 566663
No 73
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.4e-39 Score=341.54 Aligned_cols=242 Identities=25% Similarity=0.305 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||+|++...... ...+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 57899999999999995 46899999999765433 356889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccccCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHLVGPSST 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~~ 527 (663)
+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++........
T Consensus 114 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 114 ELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp BHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 999998753 25899999999999999999999998 99999999999998654 599999999987764432
Q ss_pred ---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 528 ---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
..+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+........ ...
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~------~~~~~~~~i~~~~~~~~-----~~~-- 253 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLYAQIKAGAYDYP-----SPE-- 253 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCC-----TTG--
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCCCC-----ccc--
Confidence 35778899999999989999999999999999999999999642 22233333332221100 000
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..||++|||+.|++++
T Consensus 254 -~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 -WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11223467788899999999999999999876
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.3e-39 Score=337.40 Aligned_cols=240 Identities=20% Similarity=0.328 Sum_probs=191.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCc------------
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE------------ 439 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------------ 439 (663)
.+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||++++++|.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 468999999999999965 79999999987542 335779999999999999999999999866542
Q ss_pred ---------------------------------------------cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHH
Q 006055 440 ---------------------------------------------KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSL 474 (663)
Q Consensus 440 ---------------------------------------------~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 474 (663)
.++||||+++|+|.+++..... ....++..++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHH
Confidence 7899999999999999986442 33467888999
Q ss_pred HHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----------------CCCCCccccCcc
Q 006055 475 IALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----------------TPNRVAGYRAPE 538 (663)
Q Consensus 475 i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~y~aPE 538 (663)
++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||
T Consensus 169 i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 169 IFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 9999999999999998 9999999999999999999999999998765431 124677899999
Q ss_pred ccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHH
Q 006055 539 VTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAI 618 (663)
Q Consensus 539 ~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~ 618 (663)
++.+..++.++|||||||++|||++|..|+.... ....... ... . .........++.+++.
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--------~~~~~~~-~~~----~------~~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--------RIITDVR-NLK----F------PLLFTQKYPQEHMMVQ 307 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--------HHHHHHH-TTC----C------CHHHHHHCHHHHHHHH
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--------HHHHHhh-ccC----C------CcccccCChhHHHHHH
Confidence 9999899999999999999999999987753210 1111111 110 0 0112233456788999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 006055 619 DCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 619 ~C~~~dP~~RPt~~ev~~~ 637 (663)
+|++.||++|||++|++++
T Consensus 308 ~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHS
T ss_pred HHccCCCCcCCCHHHHhhc
Confidence 9999999999999999973
No 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=349.27 Aligned_cols=242 Identities=24% Similarity=0.294 Sum_probs=196.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|.. .+|+.||+|.+...... .+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 47899999999999984 57999999998765432 356889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc---CCCceEEeccccccccCCCC-
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT---KSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~---~~~~~kl~Dfg~a~~~~~~~- 526 (663)
+|.+.+.... .+++..+..++.||+.||.|||+++ |+||||||+|||++ +++.+||+|||+++......
T Consensus 96 ~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 96 ELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp BHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 9999987543 4899999999999999999999998 99999999999998 46789999999998765432
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...++++|+|||++.+..++.++||||+||++|+|++|+.||... +.......+....... ....+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~-----~~~~~ 237 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE------DQHRLYQQIKAGAYDF-----PSPEW 237 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCCCC-----CTTTT
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHhCCCCC-----Ccccc
Confidence 235788899999999989999999999999999999999999642 2223333333222110 00001
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|+..||++|||+.|++++
T Consensus 238 ---~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 ---DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1223467788889999999999999999984
No 76
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.8e-39 Score=342.42 Aligned_cols=245 Identities=21% Similarity=0.312 Sum_probs=197.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc------ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV------TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 57899999999999985 57999999998532 224678999999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEeccccccccCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHLVGP 524 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 524 (663)
++|+|.+.+..... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 109 ~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 109 DGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp SSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 99999887754221 1235899999999999999999999998 999999999999987655 99999999987755
Q ss_pred CC----CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 525 SS----TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 525 ~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||.... ......+...... ..+..
T Consensus 186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~~~~ 255 (351)
T 3c0i_A 186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MNPRQ 255 (351)
T ss_dssp TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CCHHH
T ss_pred CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CCccc
Confidence 32 2347888999999999889999999999999999999999996521 1222222222111 11110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .....++.+++.+|+..||++|||+.|++++
T Consensus 256 --~---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 256 --W---SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --H---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --c---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1123467888999999999999999999874
No 77
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=344.65 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=194.2
Q ss_pred hcccccccceEEEEEEec--CC--cEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE--MG--TIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|... ++ ..||||.++.... ..+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 368999999999999853 22 4689999875432 34678999999999999999999999765 45789999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++|+|.++++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 174 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 174 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999997543 34789999999999999999999998 9999999999999999999999999998654321
Q ss_pred -------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 -------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||.+.+..++.++|||||||++|||++ |..||...... +... .+......
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~---~~~~~~~~------ 315 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITV---YLLQGRRL------ 315 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHH---HHHTTCCC------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHH---HHHcCCCC------
Confidence 1224557999999998889999999999999999999 66777543221 1211 11111110
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGL 652 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~ 652 (663)
..+......+.+++.+||..||++|||++|++++|+++...........
T Consensus 316 -----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~ 364 (373)
T 3c1x_A 316 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 364 (373)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCC
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceee
Confidence 0111233468889999999999999999999999999977665544333
No 78
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=340.38 Aligned_cols=265 Identities=23% Similarity=0.310 Sum_probs=193.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. +++.||||++............|+..+..++||||+++++++... ...++||||+++
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 96 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPN 96 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTT
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCC
Confidence 46899999999999987 589999999875433222333444445668999999999876432 245899999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc---------CCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ---------GPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~---------~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
|+|.+++.... .++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 97 g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 97 GSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp CBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC--EECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred CcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccc--eeecccccceEEEcCCCcEEEeecccee
Confidence 99999997543 58999999999999999999998 6 9999999999999999999999999997
Q ss_pred ccCCCC------------CCCCCccccCccccCC-------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCC---
Q 006055 521 LVGPSS------------TPNRVAGYRAPEVTDP-------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVD--- 578 (663)
Q Consensus 521 ~~~~~~------------~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~--- 578 (663)
...... ...++..|+|||++.+ ..++.++|||||||++|||++|..||..........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~ 248 (336)
T 3g2f_A 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248 (336)
T ss_dssp ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence 654321 2246778999999987 345678999999999999999988765432211110
Q ss_pred --------hHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCC
Q 006055 579 --------LPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHH 650 (663)
Q Consensus 579 --------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~ 650 (663)
.................+.. ..........++.+++.+||+.||++|||++|+++.|+++...-.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 249 QTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS 325 (336)
T ss_dssp HHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred hcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence 00111111111110000000 1112234566799999999999999999999999999998655444433
Q ss_pred C
Q 006055 651 G 651 (663)
Q Consensus 651 ~ 651 (663)
.
T Consensus 326 ~ 326 (336)
T 3g2f_A 326 V 326 (336)
T ss_dssp -
T ss_pred C
Confidence 3
No 79
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=344.82 Aligned_cols=238 Identities=23% Similarity=0.308 Sum_probs=194.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||+||+|.. .+|+.||||+++.. ......+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 46899999999753 22346678899999988 79999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.++++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 108 GGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 999999997533 4899999999999999999999998 999999999999999999999999999864332
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~~~------------ 242 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE------NEDDLFEAILNDEVV------------ 242 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCC------------
Confidence 2234788899999998888999999999999999999999999653 223334444332211
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSM------SEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~------~ev~~~ 637 (663)
.+.....++.+++.+|+..||++||++ +|+++|
T Consensus 243 ~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 243 YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 011123457788889999999999998 777764
No 80
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.2e-39 Score=330.49 Aligned_cols=247 Identities=26% Similarity=0.420 Sum_probs=203.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChhH
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLSA 454 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 454 (663)
.+.||+|+||.||+|...++..||||.++......+.+.+|+++++.++||||+++++++. .+..++||||+++++|.+
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 96 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHH
Confidence 4689999999999999888889999999877667888999999999999999999999876 456899999999999999
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----CCC
Q 006055 455 LLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-----TPN 529 (663)
Q Consensus 455 ~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~ 529 (663)
++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++....... ...
T Consensus 97 ~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 171 (279)
T 1qpc_A 97 FLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (279)
T ss_dssp HTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCC
Confidence 997432 124899999999999999999999998 9999999999999999999999999998765432 123
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+..... . .....
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~-~----------~~~~~ 234 (279)
T 1qpc_A 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT------NPEVIQNLERGYR-M----------VRPDN 234 (279)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTTCC-C----------CCCTT
T ss_pred CccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC------HHHHHHHHhcccC-C----------CCccc
Confidence 4567999999988888999999999999999999 999986432 2222222222110 0 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
...++.+++.+|+..||++|||++++++.|+++...
T Consensus 235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 234688899999999999999999999999988544
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.6e-39 Score=330.54 Aligned_cols=251 Identities=29% Similarity=0.432 Sum_probs=196.7
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|... ..+|+|.++..... .+.+.+|+++++.++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 468999999999999864 35899988764333 357889999999999999999999864 566899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 118 L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 191 (307)
T 3lb7_A 118 LYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp HHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence 999997533 35899999999999999999999998 999999999999999999999999999765421
Q ss_pred CCCCCCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 526 STPNRVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
....++..|+|||++. +..++.++|||||||++|||++|+.||..... ...+..............
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~~~~~~~----- 260 (307)
T 3lb7_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGYASPDLS----- 260 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHHTCCCCCST-----
T ss_pred cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc------HHHHHHHHhcCCCCcchh-----
Confidence 1234678899999985 56688899999999999999999999975322 111112222211111000
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
.........+.+++.+|++.+|++||++.|++++|+.+....+
T Consensus 261 -~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 -KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 0011233568889999999999999999999999999876543
No 82
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.6e-39 Score=338.81 Aligned_cols=252 Identities=23% Similarity=0.353 Sum_probs=190.4
Q ss_pred hcccccccceEEEEEEecC-Cc---EEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCcc------E
Q 006055 375 AEVLGKGTFGTAYKAVLEM-GT---IVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEK------L 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-g~---~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~ 441 (663)
.+.||+|+||.||+|.... +. .||||.++... ...+.+.+|+++++.++||||+++++++...... +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 4689999999999999543 32 79999987542 2346789999999999999999999999877655 9
Q ss_pred EEEEccCCCChhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKG-AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+||||+++|+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCCCEEEeeccccc
Confidence 99999999999999864321 12335899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 521 LVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 521 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
...... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~~~~- 258 (323)
T 3qup_A 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA------EIYNYLIGGNRL- 258 (323)
T ss_dssp ---------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCC-
T ss_pred cccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH------HHHHHHhcCCCC-
Confidence 764432 1234567999999988889999999999999999999 99999753321 222222222111
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
........++.+++.+|++.||++|||+.|+++.|+++....
T Consensus 259 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 259 ----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111223346888999999999999999999999999985443
No 83
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.3e-39 Score=340.92 Aligned_cols=243 Identities=25% Similarity=0.389 Sum_probs=198.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++.+.+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999994 67999999998754222 2568899999999999999999999999999999999998
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.........
T Consensus 138 g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 211 (348)
T 1u5q_A 138 GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 211 (348)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence 68888875422 35899999999999999999999998 9999999999999999999999999998887766677
Q ss_pred CCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 530 RVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 530 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
++..|+|||++. ...++.++|||||||++|||++|+.||... +....+..+....... . ..
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~------~~~~~~~~~~~~~~~~-~---------~~ 275 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPA-L---------QS 275 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCC-C---------CC
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHhcCCCC-C---------CC
Confidence 889999999984 567889999999999999999999999643 2222233332222111 0 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEE 640 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~ 640 (663)
......+.+++.+||+.||++|||++|++++.--
T Consensus 276 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 1123457788889999999999999999986543
No 84
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.2e-39 Score=339.95 Aligned_cols=238 Identities=21% Similarity=0.230 Sum_probs=199.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 46899999999999995 469999999986542 3356788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TP 528 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 528 (663)
|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~ 198 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence 99999997532 4899999999999999999999998 9999999999999999999999999998765443 34
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEE 608 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 608 (663)
.+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+...... .+..
T Consensus 199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~~------------~p~~ 260 (350)
T 1rdq_E 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQIYEKIVSGKVR------------FPSH 260 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------CCTT
T ss_pred cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC------CHHHHHHHHHcCCCC------------CCCC
Confidence 5788899999999999999999999999999999999999642 223333333332110 0112
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 609 EMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 609 ~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
...++.+++.+|+..||++||+ ++|+++|
T Consensus 261 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 2346788899999999999998 8888875
No 85
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-39 Score=337.92 Aligned_cols=251 Identities=27% Similarity=0.395 Sum_probs=202.4
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++++.++||||+++++++.+....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 46899999999999985 3458899999975432 236788999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC
Q 006055 447 LTMGSLSALLHGNKGA-------------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~ 507 (663)
+++|+|.+++...... ....+++..++.++.|++.||.|||+++ |+||||||+||+++.
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~NIli~~ 185 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAE 185 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--CcccccchheEEEcC
Confidence 9999999999764321 1234899999999999999999999998 999999999999999
Q ss_pred CCceEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChH
Q 006055 508 SYEARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLP 580 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~ 580 (663)
++.+||+|||+++....... ..++..|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 186 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------ 259 (314)
T 2ivs_A 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE------ 259 (314)
T ss_dssp TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------
T ss_pred CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------
Confidence 99999999999987654321 234567999999988888999999999999999999 99999653321
Q ss_pred HHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 581 RWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
..... +...... ........++.+++.+|++.||++|||+.|++++|+++...
T Consensus 260 ~~~~~-~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 RLFNL-LKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GHHHH-HHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHH-hhcCCcC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 1111110 01112334688899999999999999999999999987543
No 86
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=341.88 Aligned_cols=255 Identities=23% Similarity=0.356 Sum_probs=200.4
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 57899999999999985 246789999997542 2346789999999999 99999999999999999999999
Q ss_pred ccCCCChhHhhccCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC
Q 006055 446 YLTMGSLSALLHGNKGA------------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK 507 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~ 507 (663)
|+++|+|.+++...... ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~ 207 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTH 207 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCSGGGEEEET
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEEcC
Confidence 99999999999764321 0134899999999999999999999998 999999999999999
Q ss_pred CCceEEeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChH
Q 006055 508 SYEARVSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLP 580 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~ 580 (663)
++.+||+|||++........ ..++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 208 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------ 281 (344)
T 1rjb_A 208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD------ 281 (344)
T ss_dssp TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------
T ss_pred CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH------
Confidence 99999999999986644322 124557999999988889999999999999999998 99999654221
Q ss_pred HHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 581 RWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 581 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
..+........... .+.....++.+++.+||..||++|||+.|++++|+.+.....+
T Consensus 282 ~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 282 ANFYKLIQNGFKMD----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp HHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred HHHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 12222222221110 1112234688899999999999999999999999998776543
No 87
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-39 Score=333.53 Aligned_cols=247 Identities=27% Similarity=0.392 Sum_probs=204.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|... ++..||+|.+.......+.+.+|+++++.++||||+++++++.+....++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 97 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 468999999999999965 5889999999876666788999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-----C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-----P 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~ 528 (663)
+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .
T Consensus 98 ~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 172 (288)
T 3kfa_A 98 DYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172 (288)
T ss_dssp HHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTE
T ss_pred HHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCC
Confidence 9997643 345899999999999999999999998 99999999999999999999999999987654432 1
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
.++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ......+..... ...+.
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~------~~~~~~~~~~~~-----------~~~~~ 235 (288)
T 3kfa_A 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKDYR-----------MERPE 235 (288)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHTTCC-----------CCCCT
T ss_pred ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhccCC-----------CCCCC
Confidence 23556999999988889999999999999999999 9999865321 111111111110 01112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
....++.+++.+|+..||++|||++|+++.|+++..
T Consensus 236 ~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 236 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 233468889999999999999999999999987654
No 88
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=341.74 Aligned_cols=240 Identities=24% Similarity=0.318 Sum_probs=196.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++.. .+++.||+|.+... ......+.+|+.++..++||||+++++++.+.+..++||||+.+
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 46899999999999995 46899999998653 23356788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 172 (384)
T 4fr4_A 100 GDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172 (384)
T ss_dssp EEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccCCCcee
Confidence 9999999853 25899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 TPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...+|..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+..+.....
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~~~~~~~~~~~~------------ 237 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST---SSKEIVHTFETTVV------------ 237 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS---CHHHHHHHHHHCCC------------
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc---cHHHHHHHHhhccc------------
Confidence 3457888999999864 45889999999999999999999999753221 22222222211110
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPS-MSEVIK 636 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt-~~ev~~ 636 (663)
..+.....++.+++.+|+..||++||+ ++++.+
T Consensus 238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111123346788899999999999998 777765
No 89
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.2e-39 Score=329.44 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=194.2
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|...+|+.||||++..... ....+.+|+++++.++||||+++++++.+.+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 368999999999999988899999999865432 236788999999999999999999999999999999999986 9
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----ST 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 527 (663)
|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 86 LKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp HHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 999887543 34899999999999999999999998 999999999999999999999999999876432 12
Q ss_pred CCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh---ccccc--------c
Q 006055 528 PNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD---EWTSE--------V 595 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~ 595 (663)
..++..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+... ..... .
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE------ADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHHCCCChhhchhhhcccc
Confidence 3467789999998764 589999999999999999999999965321 1222222211 00000 0
Q ss_pred cchhhhcc------cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRY------QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~------~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+++..... ........++.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 01000000 0011223467889999999999999999999873
No 90
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-39 Score=330.70 Aligned_cols=245 Identities=22% Similarity=0.362 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... .+..||+|.++.... ..+.+.+|+.+++.++||||+++++++ ..+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCC
Confidence 468999999999999854 256799999875422 245788999999999999999999997 4567899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 99 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp TEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 999999997543 35899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||.+.+..++.++||||||+++|||++ |..||...... .....+......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~------~~~~~i~~~~~~---------- 236 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERL---------- 236 (281)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCC----------
T ss_pred ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH------HHHHHHHcCCCC----------
Confidence 224567999999988889999999999999999997 99999754321 122222221110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
........++.+++.+|++.||++|||+.|++++|+++.+
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 237 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0111233467889999999999999999999999998754
No 91
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-39 Score=330.10 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=199.8
Q ss_pred hcccccccceEEEEEEec-CC---cEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCcc-EEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG---TIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEK-LLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~ey~ 447 (663)
.++||+|+||+||+|... ++ ..||+|.+..... ..+.+.+|+.+++.++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 468999999999999843 23 3799999876432 246788999999999999999999999876665 9999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-- 525 (663)
.+|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 106 CHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred cCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 9999999997532 35899999999999999999999998 999999999999999999999999999755332
Q ss_pred ------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 526 ------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 526 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
....++..|+|||.+.+..++.++||||||+++|||++|..|+..... .......+......
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~------- 247 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-----PFDLTHFLAQGRRL------- 247 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----GGGHHHHHHTTCCC-------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-----HHHHHHHhhcCCCC-------
Confidence 123356679999999999999999999999999999996666543211 11111111111110
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCC
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGH 649 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 649 (663)
.........+.+++.+|++.||++|||++|+++.|+++.......+
T Consensus 248 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 248 ----PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ----CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 1111223468889999999999999999999999999876654433
No 92
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-39 Score=340.92 Aligned_cols=237 Identities=24% Similarity=0.340 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+|+.||||+++.. ......+..|..++..+ +||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 46899999999754 23456678888888876 99999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 102 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 102 GGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 999999997532 4899999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~~------------ 236 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELFHSIRMDNPF------------ 236 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHhCCCC------------
Confidence 2345788899999999999999999999999999999999999643 222333333222110
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMS-EVIK 636 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~-ev~~ 636 (663)
.+.....++.+++.+|+..||++||++. |+.+
T Consensus 237 ~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 237 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 0111234677888899999999999998 6654
No 93
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.1e-39 Score=349.81 Aligned_cols=242 Identities=20% Similarity=0.286 Sum_probs=197.3
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|..+ +++.||+|+++... .....+.+|+.++..++||||++++++|.+....++||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 368999999999999954 68999999986531 2234588999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.++++.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 154 g~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 154 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 9999999753 3889999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCccccCccccCCCC----CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 527 --TPNRVAGYRAPEVTDPCK----VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~----~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
+..+|+.|+|||++.+.. ++.++|||||||++|||++|+.||... +.......+.......
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~------- 292 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHKNSL------- 292 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHC-------
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC------ChhhHHHHHHhccccc-------
Confidence 445788999999987654 788999999999999999999999642 2333334443321100
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKRI 638 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~L 638 (663)
..+.......++.+++.+|+..+|++ ||+++||++|-
T Consensus 293 -~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 293 -TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp -CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred -cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 01111112346778888999999998 99999999863
No 94
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-39 Score=338.26 Aligned_cols=238 Identities=21% Similarity=0.295 Sum_probs=194.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||||++... ......+.+|+.+++.++||||+++++++.+....++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 46899999999999995 67999999998643 122457899999999999999999999999999999999999 6
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 93 g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~ 165 (336)
T 3h4j_B 93 GELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165 (336)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence 79998886532 4899999999999999999999998 9999999999999999999999999998765542
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...+++.|+|||.+.+..+ +.++|||||||++|+|++|+.||......... ..+... ....
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---------------~~i~~~---~~~~ 227 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF---------------KKVNSC---VYVM 227 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB---------------CCCCSS---CCCC
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH---------------HHHHcC---CCCC
Confidence 3447788999999988775 68999999999999999999999764322110 000000 0011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+.....++.+++.+|+..||++|||++|++++-
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 112234677889999999999999999998853
No 95
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=343.25 Aligned_cols=243 Identities=22% Similarity=0.350 Sum_probs=199.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|++++..++||||+++++++.+....++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 46899999999999995 468999999987653 2345789999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC--CCceEEeccccccccCCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK--SYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.......
T Consensus 136 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 136 FDRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp HHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 99997532 35899999999999999999999998 999999999999974 46799999999987765432
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|||||||++|||++|+.||... +....+..+....+.. +. ....
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~------~~~~~~~~i~~~~~~~---~~-----~~~~ 275 (387)
T 1kob_A 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETLQNVKRCDWEF---DE-----DAFS 275 (387)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHHCCCCC---CS-----STTT
T ss_pred eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCC---Cc-----cccc
Confidence 34778899999999989999999999999999999999999653 2223333333222110 00 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..||++|||++|++++
T Consensus 276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 223467888999999999999999999984
No 96
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.8e-39 Score=338.01 Aligned_cols=245 Identities=18% Similarity=0.299 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+|+.||+|+++..... ...+.+|..++..+ +||||+++++++.+....++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 46899999999765322 34578899999887 89999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 94 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 999999997532 4899999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC--ChHHHHHHHHhhcccccccchhhhc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV--DLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+...+.....
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 236 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------- 236 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----------
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----------
Confidence 2345788899999999999999999999999999999999999753221111 111112222111110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSM------SEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~------~ev~~~ 637 (663)
..+.....++.+++.+|+..||++||++ +|+++|
T Consensus 237 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 -RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0111223467788899999999999995 677654
No 97
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.6e-39 Score=335.46 Aligned_cols=252 Identities=24% Similarity=0.404 Sum_probs=203.6
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 46899999999999984 3578999999975532 246789999999999 99999999999999999999999
Q ss_pred ccCCCChhHhhccCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 446 YLTMGSLSALLHGNKGA-------------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~k 185 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITK 185 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEETTTEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEcCCCCEE
Confidence 99999999999764321 1235899999999999999999999998 99999999999999999999
Q ss_pred EeccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 585 (663)
|+|||+++....... ..++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..+..
T Consensus 186 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~ 259 (313)
T 1t46_A 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD------SKFYK 259 (313)
T ss_dssp ECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS------HHHHH
T ss_pred EccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch------hHHHH
Confidence 999999987655432 123456999999988889999999999999999999 99999653221 11222
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
........ ........++.+++.+|+..||++|||++|++++|+++...
T Consensus 260 ~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 260 MIKEGFRM----------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHTCCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccCCCC----------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 22221110 01112334678899999999999999999999999987544
No 98
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.6e-39 Score=338.98 Aligned_cols=253 Identities=23% Similarity=0.389 Sum_probs=202.1
Q ss_pred hcccccccceEEEEEEe--------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVL--------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
.+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++.+ +||||+++++++.+.+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 46899999999999985 3577899999976432 245688999999999 899999999999999999999
Q ss_pred EEccCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceE
Q 006055 444 YDYLTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEAR 512 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~k 512 (663)
|||+++|+|.+++...... ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~k 197 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMK 197 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceEEEcCCCCEE
Confidence 9999999999999864321 1234899999999999999999999998 99999999999999999999
Q ss_pred EeccccccccCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHH
Q 006055 513 VSDFGLAHLVGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 513 l~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 585 (663)
|+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |+.||... ........
T Consensus 198 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~ 271 (334)
T 2pvf_A 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEELFKL 271 (334)
T ss_dssp ECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHH
T ss_pred EccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC------CHHHHHHH
Confidence 99999998765432 1234567999999988888999999999999999999 99999643 22222222
Q ss_pred HHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 586 IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 586 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
+..... . ........++.+++.+||..||++|||++|++++|+++.....
T Consensus 272 ~~~~~~-~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 272 LKEGHR-M----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHTCC-C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HhcCCC-C----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 222111 0 0111233468889999999999999999999999998865433
No 99
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=363.78 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=198.8
Q ss_pred ccccccceEEEEEEec---CCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 377 VLGKGTFGTAYKAVLE---MGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.||+|+||.||+|.+. ++..||||+++.. ....+.+.+|+++++.++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999853 5678999999764 2346789999999999999999999999875 66899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST---- 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 527 (663)
|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 999997532 35899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 528 ---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
..++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+..... .
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~------~~~~~~i~~~~~-----------~ 558 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PEVMAFIEQGKR-----------M 558 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS------HHHHHHHHTTCC-----------C
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH------HHHHHHHHcCCC-----------C
Confidence 123457999999988899999999999999999998 9999975432 222222222111 0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
..+.....++.+++.+||..||++||++++|++.|+.+...
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11123345788999999999999999999999999987443
No 100
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.8e-39 Score=328.75 Aligned_cols=251 Identities=23% Similarity=0.286 Sum_probs=193.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|.. .+|+.||||++...... ...+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 36899999999999995 46899999999754322 46788999999999999999999999999999999999986
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
++.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 86 DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 5655554322 35899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCCCCccccCccccCCCC-CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc---cccccchhh--
Q 006055 527 TPNRVAGYRAPEVTDPCK-VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW---TSEVFDLEL-- 600 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~-- 600 (663)
...++..|+|||++.+.. ++.++|||||||++|||++|..||... .+....+..+..... .........
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-----NDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-----SSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-----CCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 234677899999997765 799999999999999999998886432 222233333322100 000000000
Q ss_pred ------------hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 ------------LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ------------~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...........++.+++.+|++.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000011234567788999999999999999999973
No 101
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.7e-39 Score=332.63 Aligned_cols=252 Identities=27% Similarity=0.364 Sum_probs=198.3
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 445 (663)
.+.||+|+||.||+|.+ .+++.||||+++.. ......+.+|+++++.++||||+++++++... ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 46899999999999983 46899999998754 23457899999999999999999999999876 56799999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 106 FLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp CCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred eCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999996432 34899999999999999999999998 999999999999999999999999999876543
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccC--------CCCCChHHHHHHHHhhc
Q 006055 526 S-------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLN--------EEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 590 (663)
. ...++..|+|||.+.+..++.++||||||+++|||++|+.|+..... ..+......+.......
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 23355669999999888889999999999999999999998753210 00000111111111111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
. ..........++.+++.+|++.||++|||++|+++.|+++.
T Consensus 260 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 K----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 01111233457889999999999999999999999999874
No 102
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-39 Score=339.34 Aligned_cols=260 Identities=27% Similarity=0.390 Sum_probs=199.8
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCccc-CHHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVTI-SEREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey 446 (663)
.+.||+|+||.||++.+ .+++.||||++..... ..+.+.+|+++++.++||||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 46899999999999983 4689999999976532 34568999999999999999999999874 4557899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp CTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999997532 24899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC--------CCCChHHHHHHHHhhcc
Q 006055 527 -------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE--------EGVDLPRWVQSIVKDEW 591 (663)
Q Consensus 527 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 591 (663)
...++..|+|||++.+..++.++||||||+++|+|++|+.||...... ........+........
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 123556699999998888899999999999999999999998653211 00011111111111111
Q ss_pred cccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCC
Q 006055 592 TSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHH 650 (663)
Q Consensus 592 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~ 650 (663)
..........++.+++.+|++.||++|||++|++++|+.+.........
T Consensus 262 ----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 310 (327)
T 3lxl_A 262 ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310 (327)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred ----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence 0111223345688899999999999999999999999998776655443
No 103
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.3e-39 Score=334.48 Aligned_cols=238 Identities=22% Similarity=0.282 Sum_probs=189.1
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||++.. .+|+.||+|+++... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 46899999999999986 479999999997642 123567889999999999999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 102 YLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp CCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred CCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 999999999997532 4889999999999999999999998 999999999999999999999999999764332
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 526 ----STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 526 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
....++..|+|||++.+..++.++|||||||++|||++|+.||... +....+..+......
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~--------- 239 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE------NRKKTIDKILKCKLN--------- 239 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCCC---------
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCC---------
Confidence 2234778899999999988999999999999999999999999643 222333333332110
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.+.....++.+++.+|+..||++|| +++|+++|
T Consensus 240 ---~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 ---LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0111234677888999999999999 78888775
No 104
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.8e-39 Score=336.44 Aligned_cols=245 Identities=26% Similarity=0.408 Sum_probs=195.0
Q ss_pred hcccccccceEEEEEEe-cCCcE----EEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTI----VAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|.. .+++. ||+|.+.... .....+.+|+.+++.++||||+++++++. ....++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 46899999999999995 44554 7888875432 22356778999999999999999999885 56789999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 97 PLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 9999999997542 25888999999999999999999998 99999999999999999999999999987754322
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..++.+|+|||++.+..++.++||||||+++|||++ |+.||...... .....+......
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~-------- 236 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------EVPDLLEKGERL-------- 236 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------HHHHHHHTTCBC--------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------HHHHHHHcCCCC--------
Confidence 224557999999998889999999999999999999 99999753221 111111111110
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..+.....++.+++.+||..||++|||++|++++|+++..
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0011122357788899999999999999999999998854
No 105
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-39 Score=328.20 Aligned_cols=246 Identities=25% Similarity=0.354 Sum_probs=200.5
Q ss_pred cccccccceEEEEEEec---CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||+|... ++..||||.++... ...+.+.+|+++++.++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 47999999999999853 68889999997642 2346789999999999999999999999 556789999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 9999997432 35899999999999999999999998 99999999999999999999999999987654321
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~i~~~~~~---------- 232 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PEVMAFIEQGKRM---------- 232 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT------HHHHHHHHTTCCC----------
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHhcCCcC----------
Confidence 224567999999988888999999999999999998 9999965322 2222222221110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
..+.....++.+++.+||..||++||++.|++++|+++..+.
T Consensus 233 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 233 -ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111223447888999999999999999999999999885443
No 106
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-38 Score=327.88 Aligned_cols=262 Identities=19% Similarity=0.178 Sum_probs=204.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEE-EecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYY-YSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.++..++|++++..+.++ ......++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 36899999999999995 6799999999865432 34688999999999999888777766 4556679999999 8999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++......
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 99997432 35899999999999999999999998 9999999999999 488899999999998765432
Q ss_pred --------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 --------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||.+.+..++.++|||||||++|||++|+.||..............+......... .
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~ 240 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----E 240 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----H
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----H
Confidence 234677899999999999999999999999999999999999865433322222211111100000 0
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGLQP 654 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~ 654 (663)
.. ....+.++.+++.+||+.||++|||++|+++.|+++............+
T Consensus 241 ~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~d 291 (296)
T 3uzp_A 241 VL-----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFD 291 (296)
T ss_dssp HH-----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCG
T ss_pred HH-----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccc
Confidence 00 0112346888999999999999999999999999987665554444433
No 107
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.7e-39 Score=343.89 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=188.3
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHh-hcCCCCCcccceEEEEe----cCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGV-GAVNHENLVPLRAYYYS----MDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~ 449 (663)
++||+|+||+||++.. .+|+.||||+++.. ..+.+|++++ +..+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 5799999999999995 46899999998643 4567788876 45589999999999875 5568999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 526 (663)
|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999998543 245899999999999999999999998 999999999999998 7889999999998765432
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||.......... .....+...... ...
T Consensus 219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~i~~~~~~-----~~~--- 288 (400)
T 1nxk_A 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYE-----FPN--- 288 (400)
T ss_dssp --------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC--SHHHHHHHTCCC-----CCT---
T ss_pred ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH--HHHHHHHcCccc-----CCC---
Confidence 2346778999999999999999999999999999999999997643322110 111111111110 000
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
........++.+++.+||..||++|||++|++++-
T Consensus 289 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00112334678889999999999999999999864
No 108
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=338.25 Aligned_cols=241 Identities=21% Similarity=0.303 Sum_probs=183.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++.+++||||+++++++.+....++||||+++|+|.
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 468999999999999965 58899999997643 3467889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC---C
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS---T 527 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~---~ 527 (663)
+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++...... .
T Consensus 137 ~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 137 DRIVEKG-----YYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp HHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 9997532 4899999999999999999999998 999999999999975 8899999999998765432 2
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++|||||||++|||++|+.||..... .......+....... .. ....
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~i~~~~~~~--~~------~~~~ 276 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-----DQFMFRRILNCEYYF--IS------PWWD 276 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-----HHHHHHHHHTTCCCC--CT------TTTT
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-----cHHHHHHHHhCCCcc--CC------chhh
Confidence 3467889999999998999999999999999999999999964321 111222222221110 00 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
....++.+++.+|+..||++|||+.|+++
T Consensus 277 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 23346788899999999999999999998
No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-38 Score=341.26 Aligned_cols=260 Identities=22% Similarity=0.306 Sum_probs=196.4
Q ss_pred hcccccc--cceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKG--TFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+| +||.||+|... +|+.||||+++..... .+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4689999 99999999954 7999999999765433 3567889999999999999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC----
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP---- 524 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~---- 524 (663)
+|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 110 ~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 110 YGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp TCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 999999997643 234899999999999999999999998 99999999999999999999999998854321
Q ss_pred -------CCCCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------
Q 006055 525 -------SSTPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------ 589 (663)
Q Consensus 525 -------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 589 (663)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+...+......
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT--HHHHC-------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhcCCCCccccccc
Confidence 112346677999999987 578999999999999999999999997533211 000000000000
Q ss_pred ----------------cccccccc--------hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhh
Q 006055 590 ----------------EWTSEVFD--------LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEEL 641 (663)
Q Consensus 590 ----------------~~~~~~~d--------~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~ 641 (663)
........ ..............++.+++.+||+.||++|||++|++++ ++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 00000000 0000001112234568889999999999999999999976 4444
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.5e-39 Score=337.15 Aligned_cols=238 Identities=22% Similarity=0.284 Sum_probs=196.4
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc----ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV----TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|... +|+.||||+++.. ......+..|..++..+ +||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 468999999999999965 5889999999754 23356788899999887 89999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 999999997532 4899999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~~~------------ 239 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSIMEHNVA------------ 239 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC------CHHHHHHHHHhCCCC------------
Confidence 2345788899999999999999999999999999999999999642 223334444332210
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPS-----MSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt-----~~ev~~~ 637 (663)
.+.....++.+++.+|+..||++||+ ++|+++|
T Consensus 240 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122346788889999999999995 5777765
No 111
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.4e-39 Score=363.46 Aligned_cols=242 Identities=24% Similarity=0.350 Sum_probs=197.2
Q ss_pred cccccccceEEEEEEe---cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL---EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
+.||+|+||+||+|.+ ..++.||||+++.... ..+++.+|+++++.++||||+++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 4799999999999964 3468899999976532 3578999999999999999999999986 4568899999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
|+|.++++... .+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997533 5899999999999999999999998 99999999999999999999999999987654321
Q ss_pred -----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 528 -----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 528 -----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
..++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+..... .
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~------~~~~~~i~~~~~-~-------- 591 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SEVTAMLEKGER-M-------- 591 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTCC-C--------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCC-C--------
Confidence 123466999999998899999999999999999998 9999965322 222222222111 1
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhC
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELH 642 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~ 642 (663)
..+.....++.+++.+||+.||++||++++|++.|+++.
T Consensus 592 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 592 --GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 111223457888999999999999999999999998763
No 112
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.1e-41 Score=345.49 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=183.9
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhc--CCCCCcccceEEEEecC----ccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGA--VNHENLVPLRAYYYSMD----EKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 468999999999999875 899999998653 34567778887777 79999999999998876 6799999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH--------AQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|+|.++++.. .+++..+..++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999753 3778889999999999999999 777 9999999999999999999999999997
Q ss_pred ccCCCCC--------CCCCccccCccccCCC------CCCCcchhhhHHHHHHHHHhC----------CCCCccccCCCC
Q 006055 521 LVGPSST--------PNRVAGYRAPEVTDPC------KVSQKADVYSFGVLLLELLTG----------KAPTHALLNEEG 576 (663)
Q Consensus 521 ~~~~~~~--------~~~~~~y~aPE~~~~~------~~~~~~Dv~slGvvl~elltg----------~~p~~~~~~~~~ 576 (663)
....... ..++..|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~- 235 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD- 235 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C-
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC-
Confidence 6544322 2467889999998776 334689999999999999999 66665432211
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
............... .+.........+....+.+++.+||+.||++|||++|+++.|+++..+.
T Consensus 236 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-CHHHHTTSCC-----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHHHHHHHHhhc-----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 111111111111111 1111111112356678999999999999999999999999999997654
No 113
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.1e-38 Score=331.82 Aligned_cols=254 Identities=24% Similarity=0.352 Sum_probs=188.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|.. .+|+.||||+++... .....+.+|+++++.++||||+++++++.+.+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 46799999999999994 568999999987542 234678899999999999999999999999999999999998 59
Q ss_pred hhHhhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----C
Q 006055 452 LSALLHGNK-GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----S 526 (663)
Q Consensus 452 L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~ 526 (663)
|.+++.... ......+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS 166 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCC
Confidence 999886432 122345899999999999999999999998 999999999999999999999999999876532 2
Q ss_pred CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-cccc-----c----
Q 006055 527 TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WTSE-----V---- 595 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~---- 595 (663)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+.... .... .
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND------EEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 2346788999999876 4689999999999999999999999975322 11222221100 0000 0
Q ss_pred -cchh-----------hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 -FDLE-----------LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 -~d~~-----------~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.+. ............++.+++.+|+..||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 00000011123468899999999999999999999984
No 114
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-38 Score=325.34 Aligned_cols=243 Identities=20% Similarity=0.378 Sum_probs=197.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe----------------c
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS----------------M 437 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----------------~ 437 (663)
.+.||+|+||.||+|... +|+.||||+++... ..+.+|+++++.++||||+++++++.. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 468999999999999965 79999999987543 357789999999999999999998864 3
Q ss_pred CccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 438 DEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 438 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
...++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCT
T ss_pred ceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCEEECcch
Confidence 44789999999999999997532 235899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 518 LAHLVGPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 518 ~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
+++...... ...++..|+|||.+.+..++.++||||||+++|||++|..|+.... ...... .......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~~~~-~~~~~~~ 238 (284)
T 2a19_B 168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--------KFFTDL-RDGIISD 238 (284)
T ss_dssp TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--------HHHHHH-HTTCCCT
T ss_pred hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--------HHHHHh-hcccccc
Confidence 998765432 2346778999999998889999999999999999999999874311 111111 1111111
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
.....+.+++.+|++.||++|||+.|++++|..+......
T Consensus 239 -------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 239 -------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp -------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred -------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 1223567888999999999999999999999999766443
No 115
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-38 Score=337.29 Aligned_cols=191 Identities=25% Similarity=0.361 Sum_probs=169.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-----CCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-----HENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||+||+|.. .+++.||||+++........+..|++++..++ ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 46899999999999995 57899999999865555667888999998886 999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---------------------
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK--------------------- 507 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~--------------------- 507 (663)
+++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 193 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchhcccccccccc
Confidence 889999997643 235899999999999999999999998 999999999999975
Q ss_pred ----CCceEEeccccccccCCC-CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 508 ----SYEARVSDFGLAHLVGPS-STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 508 ----~~~~kl~Dfg~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 194 ~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999876543 3345788899999999999999999999999999999999999753
No 116
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-38 Score=327.73 Aligned_cols=261 Identities=19% Similarity=0.187 Sum_probs=202.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEE-EecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYY-YSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||+||+|.. .+++.||||++..... ...+.+|++++..++|++++..+.++ ......++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 46899999999999994 6799999998755422 23578899999999999888877766 5566779999999 8999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++......
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 99997432 24899999999999999999999998 9999999999999 789999999999998764432
Q ss_pred --------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 --------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||.+.+..++.++|||||||++|||++|+.||..............+........ .
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~ 239 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP------I 239 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC------H
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch------h
Confidence 23467789999999999999999999999999999999999986544332222221111100000 0
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGLQ 653 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~ 653 (663)
.. .....+.++.+++.+|++.||++|||++|+++.|+++............
T Consensus 240 ~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~ 290 (296)
T 4hgt_A 240 EV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 290 (296)
T ss_dssp HH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCC
T ss_pred hh----hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCcc
Confidence 00 0011234788899999999999999999999999998766554444433
No 117
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=327.29 Aligned_cols=236 Identities=21% Similarity=0.225 Sum_probs=185.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCH---HHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISE---REFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|... +|+.||||++....... ..+..|+..+..+ +||||++++++|.+....++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 468999999999999965 79999999987653332 3344455554444 9999999999999999999999999 6
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... ..++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 69998887543 35899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++.+|+|||++.+ .++.++|||||||++|||++|..|+.... ....+ .... ..+.. .
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~~~~-~~~~----~~~~~-----~ 274 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---------GWQQL-RQGY----LPPEF-----T 274 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HHHHH-TTTC----CCHHH-----H
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHH-hccC----CCccc-----c
Confidence 2347888999999876 68999999999999999999977764321 01111 1111 11111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|++.||++|||++|++++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1223568889999999999999999999973
No 118
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.5e-39 Score=335.58 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=199.9
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEec--CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 445 (663)
.+.||+|+||+||++.+ .+|+.||||+++... .....+.+|+++++.++||||+++++++.+. ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 46899999999998864 368999999997653 2246789999999999999999999999874 56789999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.+++... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred cccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999753 3899999999999999999999998 999999999999999999999999999877543
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCC----CCC----hHHHHHHHHhhc
Q 006055 526 S-------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEE----GVD----LPRWVQSIVKDE 590 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~----~~~----~~~~~~~~~~~~ 590 (663)
. ...++..|+|||.+.+..++.++||||||+++|||++|+.||....... ... ....+.......
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 2 1235566999999988888999999999999999999999986532110 000 000011111111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
. ..........++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 268 ~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 268 E----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 0 0111223345788999999999999999999999999988544
No 119
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-38 Score=325.49 Aligned_cols=248 Identities=29% Similarity=0.426 Sum_probs=189.7
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|... ..||||.++..... .+.+.+|+++++.++||||+++++++ .....++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 468999999999999864 35999998765433 35689999999999999999999965 5567899999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-----
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----- 526 (663)
|.++++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 106 L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 106 LYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp HHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 999997533 35899999999999999999999998 9999999999999999999999999997654321
Q ss_pred -CCCCCccccCccccC---CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 527 -TPNRVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
...++..|+|||.+. +..++.++||||||+++|||++|+.||..... . ..+..............
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~-~~~~~~~~~~~~~~~~~----- 248 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----R-DQIIEMVGRGSLSPDLS----- 248 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----H-HHHHHHHHHTSCCCCTT-----
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-----H-HHHHHHhcccccCcchh-----
Confidence 234677899999986 56678899999999999999999999965322 1 12222222211111000
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
......+.++.+++.+|++.||++|||++|+++.|+++..
T Consensus 249 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 -KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0112234578899999999999999999999999999864
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-38 Score=347.56 Aligned_cols=238 Identities=24% Similarity=0.367 Sum_probs=198.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +|+.||||++.... .....+.+|+.+++.++||||+++++++......++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999954 79999999986542 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 101 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 101 GELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp EEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence 9999999753 25899999999999999999999998 9999999999999999999999999998775532
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...+++.|+|||++.+..+ +.++|||||||++|||++|+.||+.. +.......+...... .
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~------~~~~~~~~i~~~~~~------------~ 235 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD------HVPTLFKKICDGIFY------------T 235 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS------SSHHHHHHHHTTCCC------------C
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC------CHHHHHHHHhcCCcC------------C
Confidence 3457788999999988765 67999999999999999999999643 223333333322110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.....++.+++.+|+..||++|||++|++++
T Consensus 236 p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 236 PQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11122357788899999999999999999985
No 121
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.4e-39 Score=336.96 Aligned_cols=254 Identities=24% Similarity=0.350 Sum_probs=200.7
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhc--CCCCCcccceEEEEecC----ccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGA--VNHENLVPLRAYYYSMD----EKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999984 999999998653 34667788888876 79999999999998776 7899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH--------AQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+|+|.+++... .+++..++.++.|++.||.||| +.+ |+||||||+||+++.++.+||+|||++.
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 99999999753 3899999999999999999999 666 9999999999999999999999999997
Q ss_pred ccCCCC--------CCCCCccccCccccCCCC------CCCcchhhhHHHHHHHHHhC----------CCCCccccCCCC
Q 006055 521 LVGPSS--------TPNRVAGYRAPEVTDPCK------VSQKADVYSFGVLLLELLTG----------KAPTHALLNEEG 576 (663)
Q Consensus 521 ~~~~~~--------~~~~~~~y~aPE~~~~~~------~~~~~Dv~slGvvl~elltg----------~~p~~~~~~~~~ 576 (663)
...... ...++..|+|||++.+.. ++.++|||||||++|||++| ..||......+
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~- 274 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD- 274 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS-
T ss_pred eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc-
Confidence 664432 234677899999987653 23689999999999999999 67776543221
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
.....+...+........ ........+....+.+++.+||+.||++|||++||+++|+++.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPN-----IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHHTTSCCCCC-----CCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhCCC-----CcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 222333332222211111 1111112356678899999999999999999999999999986653
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7e-39 Score=349.20 Aligned_cols=238 Identities=22% Similarity=0.288 Sum_probs=189.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.||+|.. .+|+.||||+++.. ......+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 46899999999999994 57999999998753 22235678899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
|+|.+++.... .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 233 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 305 (446)
T 4ejn_A 233 GELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305 (446)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc
Confidence 99999997533 58999999999999999999998 77 999999999999999999999999999864332
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....++.+|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~~------------ 367 (446)
T 4ejn_A 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILMEEIR------------ 367 (446)
T ss_dssp -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------
T ss_pred cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC------CHHHHHHHHHhCCCC------------
Confidence 2345788899999999999999999999999999999999999642 222333333322110
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.+.....++.+++.+|+..||++|| +++|+++|
T Consensus 368 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0111234678888999999999999 99999874
No 123
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.6e-39 Score=331.57 Aligned_cols=249 Identities=23% Similarity=0.325 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCcc----EEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEK----LLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~----~lv~e 445 (663)
.+.||+|+||.||+|.. .+++.||||+++..... ...+.+|+.++..++||||+++++++...... ++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 46899999999999994 67999999999765322 34688999999999999999999998776554 99999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.++++... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 999999999997532 5899999999999999999999998 999999999999999999999999999866443
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 526 S-------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 526 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
. ...++..|+|||++.+..++.++||||||+++|||++|+.||.... .............. .+
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~~~----~~ 239 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVREDPI----PP 239 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC----CH
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcCCCC----Cc
Confidence 2 1236778999999999899999999999999999999999996532 22222222222111 00
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHHhhCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSE-VIKRIEELHPS 644 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~e-v~~~L~~~~~~ 644 (663)
.. . ......++.+++.+|++.||++||++.+ +.+.+.++...
T Consensus 240 ~~-~---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 240 SA-R---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp HH-H---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred cc-c---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00 0 0112346788899999999999996555 44566665443
No 124
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-38 Score=324.90 Aligned_cols=239 Identities=25% Similarity=0.361 Sum_probs=195.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+++.||||.+.... .....+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 46899999999999985 457899999986432 2356789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--C
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--T 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~ 527 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 94 ~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (279)
T 3fdn_A 94 GTVYRELQKLS-----KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166 (279)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence 99999987533 4899999999999999999999998 9999999999999999999999999986654432 3
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||.+.+..++.++||||||+++|+|++|+.||... +.......+..... ..+.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~------------~~~~ 228 (279)
T 3fdn_A 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQETYKRISRVEF------------TFPD 228 (279)
T ss_dssp -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHTCC------------CCCT
T ss_pred cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC------cHHHHHHHHHhCCC------------CCCC
Confidence 45678899999999989999999999999999999999999642 22222222221111 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
....++.+++.+|++.||++|||++|++++-
T Consensus 229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 229 FVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1234677889999999999999999999864
No 125
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=331.16 Aligned_cols=247 Identities=24% Similarity=0.407 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEEecC-----CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLEM-----GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.... +..||||.++.... ....+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4689999999999998542 24699999975432 2456889999999999999999999999989999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 129 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 129 ENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp TTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 9999999997542 35899999999999999999999998 99999999999999999999999999987654321
Q ss_pred -------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 528 -------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 528 -------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+......
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~~~~~------- 269 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHEVMKAINDGFRL------- 269 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTCCC-------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHCCCcC-------
Confidence 123556999999988889999999999999999999 999996432 12222222221110
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........+.+++.+||+.||++||++.|++++|+++...
T Consensus 270 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11112334678899999999999999999999999987544
No 126
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=337.07 Aligned_cols=255 Identities=18% Similarity=0.229 Sum_probs=191.9
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCccc------------CHHHHHHHHHHhhcCCCCCcccceEEEEe--
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTI------------SEREFKDKIEGVGAVNHENLVPLRAYYYS-- 436 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~h~niv~l~~~~~~-- 436 (663)
.+.||+|+||.||+|... ++..||||.+..... ....+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 468999999999999964 578999999875421 12346678888999999999999999987
Q ss_pred --cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC--ceE
Q 006055 437 --MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY--EAR 512 (663)
Q Consensus 437 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~--~~k 512 (663)
....++||||+ +++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+|
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSSTTSEE
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCCCCcEE
Confidence 67789999999 999999997543 5899999999999999999999998 99999999999999887 999
Q ss_pred EeccccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH
Q 006055 513 VSDFGLAHLVGPS-----------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 513 l~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~ 581 (663)
|+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~ 271 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--VAVQ 271 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH--HHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc--HHHH
Confidence 9999999765332 12346778999999999889999999999999999999999996432111 0011
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
......... +.............+.++.+++.+||..||++||++++|++.|+++...
T Consensus 272 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 272 TAKTNLLDE-----LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHT-----TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHhhccc-----ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 111111110 0000000000112344788899999999999999999999999987553
No 127
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.7e-38 Score=329.40 Aligned_cols=242 Identities=23% Similarity=0.332 Sum_probs=199.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||.++.... ....+.+|+.++..++||||+++++++.+....++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 57899999999999995 4689999999865421 367899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC----ceEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY----EARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~----~~kl~Dfg~a~~~ 522 (663)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+++..
T Consensus 97 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 97 VSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp CCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999753 25899999999999999999999998 99999999999999888 7999999999876
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+..... ..+..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~---~~~~~ 240 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITSVSY---DFDEE 240 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCC---CCCHH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhccc---ccChh
Confidence 5542 2346788999999999899999999999999999999999996432 2222222222111 01111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. .......+.+++.+|+..||++|||++|++++
T Consensus 241 ~-----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 241 F-----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp H-----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred h-----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 01123467888999999999999999999983
No 128
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-38 Score=324.13 Aligned_cols=236 Identities=22% Similarity=0.320 Sum_probs=175.8
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||+|. ..+|+.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+ ++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 679999999999998 4579999999987542 23567899999999999999999999999999999999999 66
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---T 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 527 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 98 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 170 (275)
T 2eue_A 98 ELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 170 (275)
T ss_dssp EHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC-----------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCcccccC
Confidence 8888776532 4899999999999999999999998 9999999999999999999999999998765432 2
Q ss_pred CCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 PNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++..|+|||.+.+..+ +.++||||||+++|||++|+.||... ........+...... .+
T Consensus 171 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~------------~~ 232 (275)
T 2eue_A 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVLFKNISNGVYT------------LP 232 (275)
T ss_dssp ----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCC------------CC
T ss_pred CCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCC------------CC
Confidence 346778999999987765 68999999999999999999999642 222222222222110 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1123467788999999999999999999874
No 129
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-38 Score=330.37 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCc-----cEE
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDE-----KLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~l 442 (663)
.+.||+|+||.||+|... +++.||||.++..... .+.+.+|+.++++++||||+++++++.+... .++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 468999999999999853 3558999998755333 3568899999999999999999999987553 499
Q ss_pred EEEccCCCChhHhhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 443 VYDYLTMGSLSALLHGNK-GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
||||+++|+|.+++.... ......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kl~Dfg~~~~ 196 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKK 196 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECTTSCEEECSCSCC--
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEEeecCccee
Confidence 999999999999985322 122356899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
..... ...++..|+|||.+.+..++.++||||||+++|||++ |..||...... ............
T Consensus 197 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~~~-- 268 (313)
T 3brb_A 197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH------EMYDYLLHGHRL-- 268 (313)
T ss_dssp --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHHHHTTCCC--
T ss_pred cccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHHcCCCC--
Confidence 64332 1234567999999998889999999999999999999 88898653221 122222221110
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
........++.+++.+|+..||++|||+.+++++|+++....
T Consensus 269 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 269 ---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111223346888999999999999999999999999886543
No 130
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=336.86 Aligned_cols=232 Identities=22% Similarity=0.300 Sum_probs=193.7
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc---------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||+|. ..+|+.||||+++.... ....+.+|+++++.++||||+++++++.+....++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 4689999999999998 46789999999876532 2235778999999999999999999999999999999
Q ss_pred EccCCC-ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 445 DYLTMG-SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 445 ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
||+..| +|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 999777 9999997543 4899999999999999999999998 9999999999999999999999999998776
Q ss_pred CCCC---CCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 524 PSST---PNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 524 ~~~~---~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ..++..|+|||++.+..+ +.++|||||||++|||++|+.||....... .....
T Consensus 182 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----------------~~~~~-- 242 (335)
T 3dls_A 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-----------------EAAIH-- 242 (335)
T ss_dssp TTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----------------TTCCC--
T ss_pred CCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----------------hhccC--
Confidence 5432 246788999999988776 788999999999999999999996532110 00000
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+.....++.+++.+|+..||++|||++|++++
T Consensus 243 -----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 -----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001123367888899999999999999999995
No 131
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.5e-39 Score=347.61 Aligned_cols=244 Identities=21% Similarity=0.269 Sum_probs=196.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|..+ +++.||||+++... .....+.+|+.++..++||||++++++|.+.+..++||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 468999999999999965 58999999997532 1223488999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.++++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 159 g~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~ 232 (437)
T 4aw2_A 159 GDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232 (437)
T ss_dssp CBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence 99999998532 35899999999999999999999998 9999999999999999999999999997765432
Q ss_pred --CCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 527 --TPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
...+|++|+|||++. ...++.++|||||||++|||++|+.||... +.......++........
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~------~~~~~~~~i~~~~~~~~~---- 302 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKERFQF---- 302 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHCCC----
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC------ChhHHHHhhhhccccccC----
Confidence 235788899999986 556899999999999999999999999643 223333333322110000
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDN--RPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~--RPt~~ev~~~ 637 (663)
.........++.+++.+|+..+|++ ||+++|+++|
T Consensus 303 ---p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 ---PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000112345677888999888888 9999999986
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-38 Score=338.52 Aligned_cols=248 Identities=27% Similarity=0.371 Sum_probs=183.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---CHHHHHHHHHHhhcCC-CCCcccceEEEEecC--ccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVN-HENLVPLRAYYYSMD--EKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.++..+. ||||+++++++...+ ..++||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 46899999999999984 5799999999865432 2456778999999997 999999999997654 679999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS-- 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~-- 525 (663)
+ |+|.++++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 8 5999999753 4899999999999999999999998 999999999999999999999999999865321
Q ss_pred -----------------------CCCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH
Q 006055 526 -----------------------STPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 526 -----------------------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~ 581 (663)
....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~ 238 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS------TMN 238 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC------HHH
Confidence 11246777999999876 678999999999999999999999996532 222
Q ss_pred HHHHHHhhccccc--------------------------------ccc---hhhhcccChHHHHHHHHHHHHHccCCCCC
Q 006055 582 WVQSIVKDEWTSE--------------------------------VFD---LELLRYQNVEEEMVQLLQLAIDCSAQYPD 626 (663)
Q Consensus 582 ~~~~~~~~~~~~~--------------------------------~~d---~~~~~~~~~~~~~~~l~~l~~~C~~~dP~ 626 (663)
.+..+........ .+. ..............++.+++.+|+..||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 2222221100000 000 00000000002234678899999999999
Q ss_pred CCCCHHHHHHH
Q 006055 627 NRPSMSEVIKR 637 (663)
Q Consensus 627 ~RPt~~ev~~~ 637 (663)
+|||++|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999986
No 133
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-38 Score=328.12 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEe-cCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYS-MDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|...+ ...||+|.+..... ..+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4689999999999998532 23689999876432 24678899999999999999999999654 45789999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++|+|.++++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 110 ~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 110 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp TTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 9999999997533 35799999999999999999999998 9999999999999999999999999998654321
Q ss_pred -------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhC-CCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 -------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTG-KAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||.+.+..++.++||||||+++|||++| ..||..... ... ..........
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---~~~---~~~~~~~~~~------ 251 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI---TVYLLQGRRL------ 251 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT---TTH---HHHHHTTCCC------
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH---HHH---HHHHhcCCCC------
Confidence 22345679999999888899999999999999999994 555543221 111 1122211110
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
..+......+.+++.+|++.||++|||++|+++.|+++.....
T Consensus 252 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 252 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0011123468889999999999999999999999999866543
No 134
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-38 Score=330.12 Aligned_cols=256 Identities=21% Similarity=0.326 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 46899999999999995 579999999987532 1245688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++..... ....+++..++.++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 117 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 193 (310)
T 2wqm_A 117 GDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193 (310)
T ss_dssp CBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------------
T ss_pred CCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccc
Confidence 999999864211 1235899999999999999999999998 9999999999999999999999999997665432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .........+....... . .
T Consensus 194 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~-~---------~ 259 (310)
T 2wqm_A 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEQCDYPP-L---------P 259 (310)
T ss_dssp -----CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCHHHHHHHHHTTCSCC-C---------C
T ss_pred cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hhHHHHHHHhhcccCCC-C---------c
Confidence 2346778999999999899999999999999999999999996432 22223333322221110 0 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
......++.+++.+||..||++|||++||+++|+++.+....
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 112234678889999999999999999999999998665433
No 135
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=333.03 Aligned_cols=246 Identities=23% Similarity=0.389 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEe-cCCcE----EEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTI----VAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~----vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|.. .+++. ||+|.+... ....+.+.+|+.+++.++||||+++++++... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEec
Confidence 36899999999999994 44554 577777543 33567899999999999999999999999865 488999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 527 (663)
.+|+|.+++.... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 99 PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 9999999997643 34899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhh
Q 006055 528 ------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLEL 600 (663)
Q Consensus 528 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 600 (663)
..++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~--------- 237 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ISSILEKGER--------- 237 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC---------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCC---------
Confidence 223557999999998899999999999999999999 999997543221 1111111111
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........++.+++.+||..||++||+++|+++.|+++...
T Consensus 238 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 --LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 011112334678899999999999999999999999987643
No 136
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.8e-38 Score=330.18 Aligned_cols=254 Identities=23% Similarity=0.382 Sum_probs=200.8
Q ss_pred hcccccccceEEEEEEe-cCCcEE--EEEEecCc--ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIV--AVKRLKDV--TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~v--avK~l~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|.. .+|..+ |||.++.. ....+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 46899999999999994 456654 99998753 22345789999999999 99999999999999999999999999
Q ss_pred CCChhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 449 MGSLSALLHGNKG-----------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 449 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
+|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCCCeEEEcccC
Confidence 9999999975430 12346899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 518 LAHLVGPS---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 518 ~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
+++..... ....++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~~~~-- 259 (327)
T 1fvr_A 188 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQGYR-- 259 (327)
T ss_dssp CEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGGTCC--
T ss_pred cCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc------HHHHHHHhhcCCC--
Confidence 99754322 22234667999999988888999999999999999998 999996432 2222222211110
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
.........++.+++.+|+..||++|||++|++++|+++......
T Consensus 260 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 260 ---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp ---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 011112234678889999999999999999999999988665543
No 137
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=341.70 Aligned_cols=264 Identities=17% Similarity=0.251 Sum_probs=207.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey~~~ 449 (663)
.++||+|+||+||+|... +|+.||||+++... ...+.+.+|+++++.++||||+++++++.... ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 368999999999999954 59999999997542 34577889999999999999999999998765 67999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE----cCCCceEEeccccccccCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL----TKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill----~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999975432 234899999999999999999999998 9999999999999 77888999999999876554
Q ss_pred C---CCCCCccccCccccCC--------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 526 S---TPNRVAGYRAPEVTDP--------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 526 ~---~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .....+..+........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSGA 247 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT--TCHHHHHHHHHSCCTTC
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc--chHHHHHHHhcCCCccc
Confidence 2 3346788999999754 456778999999999999999999997543222 22333334433321111
Q ss_pred ccc------------hhhh-cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 595 VFD------------LELL-RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 595 ~~d------------~~~~-~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
+.. .... ...........+.+++.+|++.||++||+++|+++.++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 000 0000 1112356677888999999999999999999999999988654
No 138
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=332.33 Aligned_cols=250 Identities=23% Similarity=0.279 Sum_probs=191.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc------cCHHHHHHHHHHhhcC---CCCCcccceEEEEecC-----c
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT------ISEREFKDKIEGVGAV---NHENLVPLRAYYYSMD-----E 439 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~-----~ 439 (663)
.+.||+|+||+||+|.. .+|+.||||++.... .....+.+|+.+++.+ +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 36899999999999994 679999999986432 1235677788777766 4999999999998765 4
Q ss_pred cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccc
Q 006055 440 KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLA 519 (663)
Q Consensus 440 ~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a 519 (663)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 789999998 59999998643 234899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCC---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc------
Q 006055 520 HLVGPSST---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE------ 590 (663)
Q Consensus 520 ~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 590 (663)
+....... ..++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE------ADQLGKIFDLIGLPPED 241 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH------HHHHHHHHHHHCCCCTT
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCChh
Confidence 87654432 2357789999999888899999999999999999999999965321 22222222110
Q ss_pred -cccccc--chhhhc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 591 -WTSEVF--DLELLR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 591 -~~~~~~--d~~~~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+..... ...... ... ..+...++.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000000 000000 000 0122356788899999999999999999998
No 139
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-38 Score=325.68 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=194.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+++.||||.+...... .+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 46899999999999995 47899999998755322 36788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 119 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 119 VDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 99999997532 5899999999999999999999998 9999999999999999999999999997665432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.... ...+...+..... .+. .
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~----~~~----~ 256 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAHINQAIP----RPS----T 256 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHHHHSCCC----CGG----G
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHhccCCC----Ccc----c
Confidence 2346778999999999889999999999999999999999996532 1122222222111 000 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhhCCCCCC
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRP-SMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RP-t~~ev~~~L~~~~~~~~~ 647 (663)
.......++.+++.+|+..||++|| +++++++.|+++......
T Consensus 257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 0112234678889999999999999 999999999998776544
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-38 Score=323.87 Aligned_cols=244 Identities=23% Similarity=0.327 Sum_probs=191.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||++.. .++..||+|++.... ...+.+.+|+++++.++||||+++++++.+....++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 47899999999999995 568999999987653 346789999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC--
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
|.+++..... ....+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++......
T Consensus 107 L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (285)
T 3is5_A 107 LLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183 (285)
T ss_dssp HHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------
T ss_pred HHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccC
Confidence 9998854211 1235899999999999999999999998 9999999999999 456789999999998765432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+. ..++.++||||||+++|||++|+.||.... ................ ..
T Consensus 184 ~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~-~~-------- 247 (285)
T 3is5_A 184 TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKATYKEPNYA-VE-------- 247 (285)
T ss_dssp ---CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCC-C---------
T ss_pred cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhhccCCcccc-cc--------
Confidence 234677899999986 467899999999999999999999996532 2222222211111000 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|++.||++|||++|++++
T Consensus 248 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00123467788999999999999999999873
No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.8e-38 Score=320.18 Aligned_cols=241 Identities=22% Similarity=0.271 Sum_probs=196.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|... ++..||+|++... ....+.+.+|+++++.++||||+++++++.+....++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 468999999999999954 5789999998765 34467899999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 94 ~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 94 FERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp HHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 99887532 4899999999999999999999998 9999999999999 788899999999998765443
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...++..|+|||.+.+. ++.++||||||+++|||++|+.||.... .......+....... .... .
T Consensus 167 ~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~---~~~~-----~ 231 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVMLKIREGTFTF---PEKD-----W 231 (277)
T ss_dssp CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCC---CHHH-----H
T ss_pred ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCC---Cchh-----h
Confidence 34467789999998765 8899999999999999999999996532 122222222221100 0000 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|++.||++|||+.|++++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 232 LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0123467888999999999999999999874
No 142
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=332.47 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=198.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEe----cCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYS----MDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||++.. .+|+.||||++... ....+.+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 46899999999999995 67999999988654 2335678999999999999999999999873 346789999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 114 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 114 RGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp TCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 9999999875321 1345899999999999999999999998 99999999999999999999999999876542211
Q ss_pred ------------CCCCccccCccccCCCC---CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 528 ------------PNRVAGYRAPEVTDPCK---VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 528 ------------~~~~~~y~aPE~~~~~~---~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
..++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... ...... .....
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~~~~- 264 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA----VQNQL- 264 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----HHCC--
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----hhccC-
Confidence 12477799999987654 6889999999999999999999996532211 111111 11100
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCC
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQG 648 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~ 648 (663)
..........++.+++.+||..||++|||++|++++|+.+.+..+..
T Consensus 265 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 265 ---------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred ---------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 00111122346888999999999999999999999999997765543
No 143
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2e-38 Score=325.57 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=197.8
Q ss_pred ccccccceEEEEEEe---cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 377 VLGKGTFGTAYKAVL---EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.||+|+||.||+|.. .+++.||||+++..... .+.+.+|+++++.++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999963 34789999999765322 46789999999999999999999998 667789999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 9999997643 4899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+..... .
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~-~--------- 239 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SEVTAMLEKGER-M--------- 239 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTCC-C---------
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHcCCC-C---------
Confidence 123467999999988888899999999999999999 9999965321 122222211111 0
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQ 647 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~ 647 (663)
..+.....++.+++.+||+.||++||++.|+++.|+++......
T Consensus 240 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 240 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 01122344688899999999999999999999999988655433
No 144
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-38 Score=351.88 Aligned_cols=244 Identities=25% Similarity=0.288 Sum_probs=200.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.||+|.. .+|+.||||++... ......+.+|++++..++||||+++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 36899999999999995 47999999998653 23456788999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 99999997543 235899999999999999999999998 9999999999999999999999999998775543
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+. .... ...
T Consensus 344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~--~~~~~i~~~i~-~~~~-----------~~p 409 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--IKREEVERLVK-EVPE-----------EYS 409 (576)
T ss_dssp CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC--CCHHHHHHHHH-HCCC-----------CCC
T ss_pred ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc--hhHHHHHHHhh-cccc-----------cCC
Confidence 245788899999999988999999999999999999999999764321 12222222221 1110 001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~ 637 (663)
.....++.+++.+|+..||++|| +++|+++|
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 12234678888899999999999 78898875
No 145
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.4e-38 Score=321.07 Aligned_cols=241 Identities=24% Similarity=0.402 Sum_probs=193.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec----CccEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM----DEKLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~lv~ey~ 447 (663)
+.||+|+||.||+|.. .++..||+|.+...... .+.+.+|+.+++.++||||+++++++... ...++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 5799999999999985 56889999998765433 45688999999999999999999998753 4479999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEeccccccccCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~ 526 (663)
++|+|.+++.... .+++..+..++.+++.||.|||+.+++|+||||||+||+++ .++.+||+|||++.......
T Consensus 112 ~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 186 (290)
T 1t4h_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred CCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence 9999999997532 48999999999999999999999876799999999999998 78999999999997655432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||.+.+ .++.++||||||+++|+|++|+.||.... +............. ...+
T Consensus 187 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~-~~~~-------- 251 (290)
T 1t4h_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVK-PASF-------- 251 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCC-CGGG--------
T ss_pred cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhccCC-cccc--------
Confidence 2346788999998875 58999999999999999999999996432 22222222222111 1101
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+|+..||++|||++|++++
T Consensus 252 -~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 252 -DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01112367889999999999999999999874
No 146
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=337.23 Aligned_cols=244 Identities=15% Similarity=0.163 Sum_probs=195.8
Q ss_pred hcccccccceEEEEEE------ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC---CCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAV------LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN---HENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 445 (663)
.++||+|+||+||+|. ..+++.||||+++.. ...++..|++++..++ |+||+++++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 3689999999999993 556899999998754 4567888888888886 9999999999999999999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-----------CCceEEe
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-----------SYEARVS 514 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-----------~~~~kl~ 514 (663)
|+++|+|.++++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 999999999997533223456999999999999999999999998 999999999999998 8999999
Q ss_pred ccccccccCC---C---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh
Q 006055 515 DFGLAHLVGP---S---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK 588 (663)
Q Consensus 515 Dfg~a~~~~~---~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 588 (663)
|||+++.... . ....+|.+|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------ 293 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------------ 293 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------------
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------------
Confidence 9999975431 1 234578889999999999999999999999999999999999965322110
Q ss_pred hcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHhhCCC
Q 006055 589 DEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNR-PSMSEVIKRIEELHPS 644 (663)
Q Consensus 589 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R-Pt~~ev~~~L~~~~~~ 644 (663)
..... +.... ....+.+++..|+..+|.+| |+++++.+.|+++.+.
T Consensus 294 --~~~~~----~~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 --KPEGL----FRRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --EECSC----CTTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --eechh----ccccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00000 00111 12345567779999999998 6888888888876543
No 147
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.5e-38 Score=337.34 Aligned_cols=236 Identities=24% Similarity=0.275 Sum_probs=185.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHH-hhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEG-VGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|.. .+++.||||+++.... ....+..|..+ ++.++||||+++++++.+.+..++||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 4688999999976532 23456667666 577899999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 999999997532 4889999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+|..|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~~~------------ 257 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------NTAEMYDNILNKPLQ------------ 257 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------BHHHHHHHHHHSCCC------------
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHhcccC------------
Confidence 2234788899999999999999999999999999999999999643 223333343332110
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVI 635 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~ 635 (663)
.......++.+++.+|+..||++||++.+.+
T Consensus 258 ~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 258 LKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 0011233577888899999999999985433
No 148
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.6e-38 Score=329.45 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=202.0
Q ss_pred hcccccccceEEEEEEec------CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE------MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... +++.||||.+..... ....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 468999999999999854 478899999875432 235688999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKG-----AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+++|+|.++++.... .....+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRD 187 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCCeEEECcCccccc
Confidence 999999999874220 11235789999999999999999999998 99999999999999999999999999976
Q ss_pred cCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
..... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||... +.......+.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~~~~~- 260 (322)
T 1p4o_A 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL------SNEQVLRFVMEGGLLD- 260 (322)
T ss_dssp GGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------CHHHHHHHHHTTCCCC-
T ss_pred cccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC------CHHHHHHHHHcCCcCC-
Confidence 54322 1224567999999988889999999999999999999 88998643 2222232222221110
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
........+.+++.+|+..||++|||+.|++++|+++...
T Consensus 261 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 261 ----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred ----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1112334678899999999999999999999999987553
No 149
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.5e-38 Score=321.52 Aligned_cols=242 Identities=25% Similarity=0.316 Sum_probs=197.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||+|++...... ...+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 36899999999999995 46899999999765433 356789999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEeccccccccCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHLVGPSST 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~~~~~~~ 527 (663)
+|.+.+.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++........
T Consensus 91 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 91 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 9998887532 4899999999999999999999998 999999999999987665 99999999987655432
Q ss_pred ---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 528 ---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 528 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
..++..|+|||.+.+..++.++||||||+++|+|++|+.||... +.......+........ . .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~--~------~ 229 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLYAQIKAGAYDYP--S------P 229 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCC--T------T
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC------chhHHHHHHHhccccCC--c------h
Confidence 35677899999999999999999999999999999999999642 22222222222211100 0 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|++.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011223467788899999999999999999985
No 150
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.1e-38 Score=343.96 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=187.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||+||+|. ..+|+.||||++..... ..+.+.+|+.+++.++||||+++++++.... +.++||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 4689999999999998 45699999999976432 2467889999999999999999999996553 459999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 147 E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp ECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred eCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99987 56666642 3889999999999999999999998 99999999999999999999999999987765
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------------
Q 006055 525 SS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------------ 589 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 589 (663)
.. ...+|..|+|||++.+..++.++||||+||++|||++|+.||.+.. ....+..++..
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~------~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHTTS
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHc
Confidence 42 2356788999999999999999999999999999999999996532 12222222111
Q ss_pred ----------cccccccch-hhh-----ccc--ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 ----------EWTSEVFDL-ELL-----RYQ--NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ----------~~~~~~~d~-~~~-----~~~--~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......... ... ... .......++.+++.+|+..||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 000 000 011225578899999999999999999999985
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=325.13 Aligned_cols=238 Identities=23% Similarity=0.388 Sum_probs=177.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|.. .+|+.||||.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 36899999999999995 579999999986432 2246789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 96 GEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp EEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 99999997542 35899999999999999999999998 9999999999999999999999999998765322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||......+ ........ . ...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~----~--------~~~ 231 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN------TLNKVVLA----D--------YEM 231 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSS----C--------CCC
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH------HHHHHhhc----c--------cCC
Confidence 2346778999999998889999999999999999999999997543211 01110000 0 001
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
+.....++.+++.+|+..||++|||++|+++
T Consensus 232 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112346778899999999999999999988
No 152
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.6e-39 Score=326.34 Aligned_cols=245 Identities=26% Similarity=0.404 Sum_probs=192.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEec-CccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSM-DEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||++... |+.||||.++... ..+.+.+|+++++.++||||+++++++.+. ...++||||+++|+|.
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 468999999999999875 8999999987543 456789999999999999999999997654 4689999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCc
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVA 532 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~ 532 (663)
+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ...++.
T Consensus 104 ~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 178 (278)
T 1byg_A 104 DYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178 (278)
T ss_dssp HHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC------------CCT
T ss_pred HHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccc
Confidence 9997532 123789999999999999999999998 9999999999999999999999999997665432 234567
Q ss_pred cccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHH
Q 006055 533 GYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMV 611 (663)
Q Consensus 533 ~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 611 (663)
.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+... ... ........
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~------~~~~~~~~~~-~~~----------~~~~~~~~ 241 (278)
T 1byg_A 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEKG-YKM----------DAPDGCPP 241 (278)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG------GGHHHHHTTT-CCC----------CCCTTCCH
T ss_pred cccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcC-CCC----------CCcccCCH
Confidence 7999999988889999999999999999998 9999965321 1122222111 100 11122334
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 612 QLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 612 ~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 68888999999999999999999999998854
No 153
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=336.39 Aligned_cols=265 Identities=17% Similarity=0.150 Sum_probs=203.0
Q ss_pred hcccccccceEEEEEEec---------CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCccc---------------c
Q 006055 375 AEVLGKGTFGTAYKAVLE---------MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVP---------------L 430 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~---------------l 430 (663)
.+.||+|+||.||+|... +++.||||.+... ..+.+|++++..++||||++ +
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 468999999999999965 3889999998754 46889999999999999887 6
Q ss_pred eEEEEe-cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC
Q 006055 431 RAYYYS-MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 431 ~~~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~ 509 (663)
++++.. ....++||||+ +|+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAENIFVDPED 196 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGGEEEETTE
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEEcCCC
Confidence 777776 67789999999 999999998642 235899999999999999999999998 99999999999999998
Q ss_pred --ceEEeccccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCC
Q 006055 510 --EARVSDFGLAHLVGPS-----------STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEG 576 (663)
Q Consensus 510 --~~kl~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~ 576 (663)
.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 275 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT- 275 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-
Confidence 8999999999765432 11246778999999999899999999999999999999999997643111
Q ss_pred CChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCCCCCCCCCC
Q 006055 577 VDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQGHHGLQPDD 656 (663)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 656 (663)
..+........ . ......+... .. .....++.+++.+|+..||++|||++|+++.|+++............+++
T Consensus 276 ~~~~~~~~~~~-~-~~~~~~~~~~-~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~dw~ 349 (352)
T 2jii_A 276 EDIMKQKQKFV-D-KPGPFVGPCG-HW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLP 349 (352)
T ss_dssp HHHHHHHHHHH-H-SCCCEECTTS-CE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCCCC
T ss_pred HHHHHHHHhcc-C-Chhhhhhhcc-cc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCccccCc
Confidence 01111111111 1 1111111000 00 01234678888899999999999999999999999777665555555444
No 154
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=333.95 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=190.0
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCC--CCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNH--ENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++...+++.||||++...... .+.+.+|+.++..++| +||+++++++.+....++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 3689999999999999888999999998755333 3568899999999977 999999999999999999999 567
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 93 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 89999998643 5899999999999999999999998 99999999999997 6789999999998765432
Q ss_pred ---CCCCCccccCccccCC-----------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 527 ---TPNRVAGYRAPEVTDP-----------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... +....+.........
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNHE 239 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTSC
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCcc
Confidence 2347888999999854 568889999999999999999999996432 112222222211111
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
... +.....++.+++.+||..||++|||+.|++++-
T Consensus 240 ~~~----------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 IEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCC----------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 110 111123577888999999999999999999874
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.5e-38 Score=328.68 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=191.3
Q ss_pred cccccccceEEEEEE-ecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
++||+|+||.||+|. ..+++.||||++.... .....+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 579999999999999 4579999999997653 3467889999999884 799999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~~~~~~--- 526 (663)
.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||+++......
T Consensus 99 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 99 LSHIHKRR-----HFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred HHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 99997532 4899999999999999999999998 999999999999998776 9999999987653211
Q ss_pred --------CCCCCccccCccccCC-----CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCC-C--------hHHHHH
Q 006055 527 --------TPNRVAGYRAPEVTDP-----CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGV-D--------LPRWVQ 584 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~-~--------~~~~~~ 584 (663)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||......+.. . ......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 1236778999999864 45788999999999999999999999765332210 0 001111
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+..... ..... . ......++.+++.+|+..||++|||++|++++
T Consensus 252 ~i~~~~~--~~~~~---~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 252 SIQEGKY--EFPDK---D---WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHCCC--CCCHH---H---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhccCc--ccCch---h---cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111110 00000 0 01123467889999999999999999999983
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-38 Score=333.36 Aligned_cols=247 Identities=22% Similarity=0.258 Sum_probs=193.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc------ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV------TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|.. .+++.||+|++... ....+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 57899999999999995 56889999998643 123467899999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCc
Q 006055 448 TMGSLSALLHGNKGA-----------------------------------GRTPLNWEMRSLIALGAARGIEYLHAQGPN 492 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~ 492 (663)
++|+|.+++...... ....+++..+..++.|++.||.|||+.+
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-- 188 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-- 188 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--
Confidence 999999998521100 0112457778889999999999999998
Q ss_pred ceecCCCCCCEEEcCCC--ceEEeccccccccCCC--------CCCCCCccccCccccCC--CCCCCcchhhhHHHHHHH
Q 006055 493 VSHGNIKSSNILLTKSY--EARVSDFGLAHLVGPS--------STPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLE 560 (663)
Q Consensus 493 iiHrdlk~~Nill~~~~--~~kl~Dfg~a~~~~~~--------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~e 560 (663)
|+||||||+||+++.++ .+||+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++||
T Consensus 189 ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~e 268 (345)
T 3hko_A 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268 (345)
T ss_dssp EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHH
T ss_pred ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHH
Confidence 99999999999998776 8999999999865321 22346778999999875 678899999999999999
Q ss_pred HHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 561 LLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 561 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
|++|+.||.... .......+........ . ........++.+++.+|+..||++|||+.|++++
T Consensus 269 l~~g~~pf~~~~------~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 269 LLMGAVPFPGVN------DADTISQVLNKKLCFE--N------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHSSCSSCCSS------HHHHHHHHHHCCCCTT--S------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHCCCCCCCCC------hHHHHHHHHhcccccC--C------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999996532 2223333332221110 0 1111223467888999999999999999999985
No 157
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2e-38 Score=323.71 Aligned_cols=245 Identities=23% Similarity=0.365 Sum_probs=195.3
Q ss_pred hcccccccceEEEEEEecC----CcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEM----GTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|...+ +..||||.++... ...+.+.+|+.+++.++||||+++++++.+ +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4689999999999998542 3469999987642 235678999999999999999999999764 56799999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
+++|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 96 YGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 999999997532 34899999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 527 ---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~------~~~~~~~~~~~---------- 233 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD------VIGVLEKGDRL---------- 233 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG------HHHHHHHTCCC----------
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH------HHHHHhcCCCC----------
Confidence 2234567999999988889999999999999999998 999996532211 11111111110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.........+.+++.+|+..||++|||+.|++++|+++..
T Consensus 234 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 234 -PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 0111123467888999999999999999999999998743
No 158
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-38 Score=332.44 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=190.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++.... ..++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 36799999999999995 57999999998654333 456889999999999999999999997653 459999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+ +++|.+++... .+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 999 78999999753 4899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc--ccc----cc
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW--TSE----VF 596 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 596 (663)
.. ...++..|+|||++.+ ..++.++||||+||+++||++|+.||.... ....+..+..... ..+ +.
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHHhh
Confidence 33 3456788999999876 678999999999999999999999996532 2222222221100 000 00
Q ss_pred ch-------hhh-----cc-cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhC
Q 006055 597 DL-------ELL-----RY-QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELH 642 (663)
Q Consensus 597 d~-------~~~-----~~-~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~ 642 (663)
.. .+. .. ........++.+++.+|+..||++|||++|+++| ++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 00 000 00 0011223467888899999999999999999985 44443
No 159
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.4e-38 Score=330.33 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=199.7
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCc-cEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDE-KLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~-~~lv~ 444 (663)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+.++..+ +||||+++++++...+. .++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 46899999999999984 3568999999976532 235788999999999 78999999999877554 89999
Q ss_pred EccCCCChhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEE
Q 006055 445 DYLTMGSLSALLHGNKGA-----------GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARV 513 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl 513 (663)
||+++|+|.+++...... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl 189 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKI 189 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEE
Confidence 999999999999864321 0123789999999999999999999998 999999999999999999999
Q ss_pred eccccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHH
Q 006055 514 SDFGLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 514 ~Dfg~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
+|||+++....... ..++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..+...
T Consensus 190 ~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~ 263 (316)
T 2xir_A 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRR 263 (316)
T ss_dssp CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS------HHHHHH
T ss_pred CCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh------HHHHHH
Confidence 99999987654322 124567999999988889999999999999999998 99999653221 111122
Q ss_pred HhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 587 VKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 587 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
+....... .......++.+++.+||+.||++|||+.|++++|+++.+
T Consensus 264 ~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 264 LKEGTRMR----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCccCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22211110 011123467888999999999999999999999998754
No 160
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=325.30 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|... +|+.||||++...... .+.+.+|+++++.++||||+++++++.+....++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 368999999999999964 5999999998765433 456889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS---- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~---- 526 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 88 VLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp HHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred hHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 9999887533 4899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------------cccc
Q 006055 527 TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------------EWTS 593 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 593 (663)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+...... .+..
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD---QLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhcccccccccccccccccc
Confidence 2346778999999865 567999999999999999999999997532211 11111111100 0000
Q ss_pred c--ccchhhhc--ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 E--VFDLELLR--YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~--~~d~~~~~--~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
. ..++.... .........++.+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00000000 00001234467889999999999999999999985
No 161
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.3e-38 Score=347.33 Aligned_cols=244 Identities=19% Similarity=0.258 Sum_probs=199.1
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
++||+|+||.||+|.. .+|+.||+|++.... .....+.+|+++++.++||||+++++++.+....++||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 5799999999999996 469999999996542 33567889999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST--- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 527 (663)
+|.+++..... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 271 ~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 347 (543)
T 3c4z_A 271 DIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347 (543)
T ss_dssp BHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBC
T ss_pred CHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccc
Confidence 99999875431 2346899999999999999999999998 99999999999999999999999999987654422
Q ss_pred -CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 528 -PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........+..... ..+
T Consensus 348 ~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~--~~~~~~~~~~i~~~~~------------~~p 413 (543)
T 3c4z_A 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVLEQAV------------TYP 413 (543)
T ss_dssp CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC--CCCHHHHHHHHHHCCC------------CCC
T ss_pred cccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc--chhHHHHHHHHhhccc------------CCC
Confidence 3578889999999999999999999999999999999999976422 1222333333332211 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIK 636 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~ 636 (663)
......+.+++.+|+..||++||++ +++++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1223467788889999999999975 66665
No 162
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.1e-40 Score=349.17 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=183.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHH---HHhhcCCCCCcccce-------EEEEecCc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKI---EGVGAVNHENLVPLR-------AYYYSMDE 439 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~~~ 439 (663)
.+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|+ +.++.++||||++++ +++.+.+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46899999999999994 67999999998743 22346788999 456666899999998 66655432
Q ss_pred -----------------cEEEEEccCCCChhHhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCC
Q 006055 440 -----------------KLLVYDYLTMGSLSALLHGNKGA--GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKS 500 (663)
Q Consensus 440 -----------------~~lv~ey~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~ 500 (663)
.++||||+ +|+|.+++...... ....+++..++.|+.||+.||+|||+++ |+||||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDikp 234 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRP 234 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCCCG
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCH
Confidence 78999999 57999999753211 1123557888999999999999999998 99999999
Q ss_pred CCEEEcCCCceEEeccccccccCCCC-CCCCCccccCccccCCC-----------CCCCcchhhhHHHHHHHHHhCCCCC
Q 006055 501 SNILLTKSYEARVSDFGLAHLVGPSS-TPNRVAGYRAPEVTDPC-----------KVSQKADVYSFGVLLLELLTGKAPT 568 (663)
Q Consensus 501 ~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slGvvl~elltg~~p~ 568 (663)
+|||++.++.+||+|||+++...... ...+ ..|+|||++.+. .++.++|||||||++|||++|+.||
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf 313 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI 313 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999998755432 2335 889999999877 7899999999999999999999999
Q ss_pred ccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 569 HALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......... .+.. .. .....++.+++.+||..||++|||+.|++++
T Consensus 314 ~~~~~~~~~~---------------~~~~----~~---~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 314 TKDAALGGSE---------------WIFR----SC---KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp ------CCSG---------------GGGS----SC---CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred cccccccchh---------------hhhh----hc---cCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 7543221100 0000 00 1123467788899999999999999999873
No 163
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=335.95 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=182.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCC-CCCcccceEEEEe--------cCccEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVN-HENLVPLRAYYYS--------MDEKLLV 443 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--------~~~~~lv 443 (663)
.++||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.++. ||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 46899999999999995 579999999986543 33467889999999996 9999999999853 2336899
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|||+. |+|.+++..... ...+++..++.++.||+.||.|||+.+++|+||||||+|||++.++.+||+|||+++...
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 189 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence 99996 699998864221 235899999999999999999999987679999999999999999999999999998765
Q ss_pred CCC----------------CCCCCccccCcccc---CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHH
Q 006055 524 PSS----------------TPNRVAGYRAPEVT---DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQ 584 (663)
Q Consensus 524 ~~~----------------~~~~~~~y~aPE~~---~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 584 (663)
... ...++..|+|||++ .+..++.++|||||||++|||++|+.||....... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~-- 261 (337)
T 3ll6_A 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------I-- 261 (337)
T ss_dssp SCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred ccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------h--
Confidence 432 12366779999998 56678889999999999999999999996532111 0
Q ss_pred HHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 585 SIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 585 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
....... .........+.+++.+|++.||++|||++|++++|+++....
T Consensus 262 --~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 262 --VNGKYSI----------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ------CCC----------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --hcCcccC----------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0010000 000111124678889999999999999999999999886544
No 164
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.9e-38 Score=338.84 Aligned_cols=257 Identities=22% Similarity=0.288 Sum_probs=197.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC--------CCCcccceEEEE----ecCccE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN--------HENLVPLRAYYY----SMDEKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~----~~~~~~ 441 (663)
.++||+|+||+||+|. ..+++.||||+++......+.+.+|+++++.++ |+||+++++++. +....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 4689999999999998 456899999999866555677889999998885 788999999987 455789
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCC-----------
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSY----------- 509 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~----------- 509 (663)
+||||+ +++|.+.+.... ...+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~~~~~~~ 195 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEAT 195 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhhhhhhhH
Confidence 999999 556666655432 23589999999999999999999998 7 99999999999999775
Q ss_pred --------------------------------------ceEEeccccccccCCCC-CCCCCccccCccccCCCCCCCcch
Q 006055 510 --------------------------------------EARVSDFGLAHLVGPSS-TPNRVAGYRAPEVTDPCKVSQKAD 550 (663)
Q Consensus 510 --------------------------------------~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D 550 (663)
.+||+|||+++...... ...++..|+|||++.+..++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 275 (397)
T 1wak_A 196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPAD 275 (397)
T ss_dssp ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred HHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHH
Confidence 79999999998765442 345788899999999988999999
Q ss_pred hhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---h---------cccccccch------------------hh
Q 006055 551 VYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK---D---------EWTSEVFDL------------------EL 600 (663)
Q Consensus 551 v~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d~------------------~~ 600 (663)
||||||++|||++|+.||......+.......+..+.. . ......+.. -.
T Consensus 276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 1wak_A 276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 355 (397)
T ss_dssp HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhh
Confidence 99999999999999999986544332211111111111 0 000000000 00
Q ss_pred hcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 601 LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 601 ~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+....+.+++.+|+..||++|||++|+++|
T Consensus 356 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 356 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0112245667789999999999999999999999874
No 165
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4e-38 Score=336.81 Aligned_cols=240 Identities=20% Similarity=0.325 Sum_probs=190.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCC--CCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVN--HENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++...+++.||||++...... ...+.+|+.++..++ ||||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4689999999999999888999999998754333 367899999999996 5999999999999999999999 567
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 89999997643 5889999999999999999999998 99999999999995 5799999999998765432
Q ss_pred ---CCCCCccccCccccCC-----------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 527 ---TPNRVAGYRAPEVTDP-----------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.... +....+..+......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~~ 286 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNHE 286 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTSC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCcccc
Confidence 2347888999999864 368889999999999999999999996432 112222222222111
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
... +.....++.+++.+||..||++|||+.|++++-
T Consensus 287 ~~~----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 287 IEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCC----------CccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 100 001123677889999999999999999999764
No 166
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.1e-38 Score=320.33 Aligned_cols=241 Identities=23% Similarity=0.288 Sum_probs=195.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 468999999999999964 78999999986543 235778999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 92 L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 92 LFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp GGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 99999753 35899999999999999999999998 999999999999999999999999999765322
Q ss_pred CCCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 STPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....++..|+|||.+.+..+ +.++||||||+++|||++|+.||....... ............ . .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~---~-------~ 229 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKEKKTY---L-------N 229 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-----HHHHHHHTTCTT---S-------T
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHhhhcccc---c-------C
Confidence 23346778999999987664 778999999999999999999997643211 111111111100 0 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........+.+++.+|+..||++|||++|++++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011223467788999999999999999999873
No 167
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=341.07 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||+||++.. .+|+.||||+++.... ....+.+|..++..++||||+++++++.+.+..++||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 36899999999999996 4799999999975321 123478899999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++......
T Consensus 146 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 146 GDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 99999997532 25899999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCccccCccccC-------CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 527 --TPNRVAGYRAPEVTD-------PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...+|+.|+|||++. ...++.++|||||||++|||++|+.||... +.......+.........
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~~~~~~~-- 291 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD------STAETYGKIVHYKEHLSL-- 291 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHCCC--
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC------CHHHHHHHHHhcccCcCC--
Confidence 235788899999986 456889999999999999999999999653 222333333321100000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNR---PSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~R---Pt~~ev~~~ 637 (663)
.........++.+++.+|+. +|++| |+++|+++|
T Consensus 292 -----p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 -----PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -----C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -----CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00011223467788889998 99998 699999876
No 168
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.1e-39 Score=335.97 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=199.9
Q ss_pred hcccccccceEEEEEEec-CC-----cEEEEEEecCccc--CHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG-----TIVAVKRLKDVTI--SEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g-----~~vavK~l~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.+.||+|+||.||+|... ++ ..||+|.+..... ..+.+.+|+.++..+ +||||+++++++.+....++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 468999999999999953 23 4799999976532 346789999999999 89999999999999999999999
Q ss_pred ccCCCChhHhhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecc
Q 006055 446 YLTMGSLSALLHGNKG---------AGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDF 516 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Df 516 (663)
|+++|+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Df 208 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDF 208 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEGGGEEEBCCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECCCCeEEECcc
Confidence 9999999999864321 01235799999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCC------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhh
Q 006055 517 GLAHLVGPSST------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 517 g~a~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
|+++....... ..++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..+......
T Consensus 209 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~~~~ 282 (333)
T 2i1m_A 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------SKFYKLVKD 282 (333)
T ss_dssp GGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS------HHHHHHHHH
T ss_pred ccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh------HHHHHHHhc
Confidence 99986543321 224567999999988889999999999999999999 99999653221 122222222
Q ss_pred cccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 590 EWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..... .+......+.+++.+||+.||++|||++|++++|+++..
T Consensus 283 ~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 283 GYQMA----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp TCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCC----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 21110 011123467889999999999999999999999988743
No 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.3e-38 Score=330.70 Aligned_cols=238 Identities=24% Similarity=0.316 Sum_probs=196.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 468999999999999954 58899999987542 2246688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 126 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 126 RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp CBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 9999998753 24899999999999999999999998 9999999999999999999999999998764322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... .
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~------------~ 260 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS------------I 260 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC------------C
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCCCC------------C
Confidence 2346778999999988889999999999999999999999996422 22222222221110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+.+++.+|++.||++|||++|++++
T Consensus 261 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11122357788899999999999999999985
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.7e-38 Score=319.62 Aligned_cols=247 Identities=21% Similarity=0.356 Sum_probs=198.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc-------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT-------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|... +|+.||||.++... ...+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 468999999999999965 69999999986542 1367899999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC----ceEEecccccccc
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY----EARVSDFGLAHLV 522 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~----~~kl~Dfg~a~~~ 522 (663)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||++...
T Consensus 90 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 90 VSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999753 25899999999999999999999998 99999999999998877 7999999999876
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+..... .....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~---~~~~~ 233 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------KQETLTNISAVNY---DFDEE 233 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCC---CCCHH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHHHHHhHhccc---CCcch
Confidence 5432 2346778999999998899999999999999999999999996532 1222222221111 01111
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhC
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELH 642 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~ 642 (663)
. .......+.+++.+|+..||++|||+.|++++ ++++.
T Consensus 234 ~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 234 Y-----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp H-----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred h-----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 1 01123467888999999999999999999984 45553
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6e-38 Score=327.65 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=195.5
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
+.||+|+||.||+|... +|+.||||+++... .....+.+|+.++..+ .||||+++++++.+....++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 68999999999999954 69999999987642 3367899999999998 5699999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC-
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~- 526 (663)
+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 189 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE 189 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc
Confidence 9999986532 245899999999999999999999998 999999999999998 7899999999998775442
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... .. ..
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~---~~-----~~ 255 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED------NQETYLNISQVNVD---YS-----EE 255 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---CC-----TT
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHHHhcccc---cC-----ch
Confidence 2347788999999999999999999999999999999999996532 12222222211110 00 01
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........+.+++.+|+..||++|||++|++++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 111233467788999999999999999999985
No 172
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.7e-38 Score=334.91 Aligned_cols=189 Identities=22% Similarity=0.363 Sum_probs=166.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|... +|+.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 368999999999999954 78999999987642 224678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCC--CCCC
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP--SSTP 528 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~--~~~~ 528 (663)
|.+++.... .+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++..... ....
T Consensus 118 L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 118 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999997533 489999999999999999999986 7 99999999999999999999999999875432 2234
Q ss_pred CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 529 NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
.++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 578889999999999999999999999999999999999975
No 173
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=318.78 Aligned_cols=240 Identities=20% Similarity=0.284 Sum_probs=194.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||+||+|... +++.||||+++... .....+.+|+..+..+ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 468999999999999964 79999999987542 2356788899999988 999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-------------------Cc
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-------------------YE 510 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-------------------~~ 510 (663)
|+|.+++..... ....+++..+..++.||+.||.|||+++ |+||||||+||+++.+ ..
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM 172 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC--------------------CCC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCcccccccccccccCCceE
Confidence 999999975321 1135899999999999999999999998 9999999999999844 47
Q ss_pred eEEeccccccccCCCCCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh
Q 006055 511 ARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 511 ~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
+||+|||.+..........++..|+|||.+.+. .++.++|||||||++|||++|..|+.... ....+...
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~~~~~ 243 (289)
T 1x8b_A 173 FKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---------QWHEIRQG 243 (289)
T ss_dssp EEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---------HHHHHHTT
T ss_pred EEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---------HHHHHHcC
Confidence 999999999988776667788899999999765 56689999999999999999998764311 11111111
Q ss_pred cccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 EWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..... +.....++.+++.+|++.||++|||+.|++++
T Consensus 244 -~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 244 -RLPRI----------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -CCCCC----------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCC----------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11110 11123467888999999999999999999883
No 174
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-37 Score=320.84 Aligned_cols=239 Identities=25% Similarity=0.377 Sum_probs=198.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.. .+++.||||.+... ....+.+.+|+.+++.++||||+++++++.+....++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 46899999999999984 57899999998754 2345789999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 107 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 107 ALDLLEPG------PLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp HHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 99999642 4899999999999999999999998 9999999999999999999999999997765432 2
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+... .... ...
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~~----------~~~ 241 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFLIPKN-NPPT----------LEG 241 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS-CCCC----------CCS
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC------HHHHHHHhhcC-CCCC----------Ccc
Confidence 346778999999999889999999999999999999999996432 11222221111 1110 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.....+.+++.+|+..||++|||++|++++.
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1234678889999999999999999999864
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.4e-38 Score=320.06 Aligned_cols=238 Identities=23% Similarity=0.286 Sum_probs=197.2
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +++.||||.+... ......+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 468999999999999954 6889999998643 22356789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC--CC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--ST 527 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--~~ 527 (663)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 99 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 99 GELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 99999997532 4899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+..... ..+.
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~------------~~~~ 233 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------HTETHRRIVNVDL------------KFPP 233 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCC------------CCCT
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC------HhHHHHHHhcccc------------CCCC
Confidence 456788999999999889999999999999999999999996432 1222222222111 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..||++|||++|++++
T Consensus 234 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 123467788999999999999999999984
No 176
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.2e-38 Score=332.53 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=192.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||++.. .+|+.||||+++.... ...+|++++.++ +||||+++++++.+....++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 46899999999999995 4689999999976532 235677777777 799999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC----CceEEeccccccccCCCC--
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS----YEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~----~~~kl~Dfg~a~~~~~~~-- 526 (663)
.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||+.++ +.+||+|||+++......
T Consensus 104 ~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 104 LDKILRQK-----FFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp HHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 99997533 5899999999999999999999998 9999999999998543 359999999998764432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||..... .........+........ ..
T Consensus 177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~~~~i~~~~~~~~--------~~ 245 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---DTPEEILARIGSGKFSLS--------GG 245 (342)
T ss_dssp BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT---SCHHHHHHHHHHCCCCCC--------ST
T ss_pred eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc---CCHHHHHHHHccCCcccC--------cc
Confidence 23467789999999887788999999999999999999999975321 223333333332221100 00
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.......++.+++.+|+..||++|||+.|++++-
T Consensus 246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0112234677888899999999999999999853
No 177
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.5e-38 Score=339.95 Aligned_cols=191 Identities=26% Similarity=0.339 Sum_probs=166.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC------CCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV------NHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.++||+|+||+||+|.. .+++.||||+++........+.+|++++..+ +|+||+++++++......++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 46899999999999984 5689999999987654456777888887766 6779999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc--eEEeccccccccCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE--ARVSDFGLAHLVGPS 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~--~kl~Dfg~a~~~~~~ 525 (663)
. ++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~ 255 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence 7 59999987643 235899999999999999999999998 999999999999999987 999999999776544
Q ss_pred C-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 526 S-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 526 ~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
. ...++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 256 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 256 VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 3 345788899999999989999999999999999999999999753
No 178
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.3e-38 Score=339.14 Aligned_cols=242 Identities=23% Similarity=0.350 Sum_probs=185.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||+||+|.. .+++.||||++..... ....+.+|+.++++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 46899999999999984 5689999999865321 1124789999999999999999999975 45689999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEeccccccc
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDFGLAHL 521 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Dfg~a~~ 521 (663)
||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++.
T Consensus 219 e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 219 ELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp ECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 999999999988753 35899999999999999999999998 99999999999997544 599999999987
Q ss_pred cCCCC---CCCCCccccCccccCC---CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 522 VGPSS---TPNRVAGYRAPEVTDP---CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 522 ~~~~~---~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
..... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+... +......
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~----i~~~~~~-- 363 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ----ITSGKYN-- 363 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHH----HHTTCCC--
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHH----HhcCCCC--
Confidence 76543 2346788999999864 567889999999999999999999997533211 12111 1111100
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.. ......++.+++.+|+..||++|||++|++++
T Consensus 364 ~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 FIPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCchh-----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00100 01123467888999999999999999999984
No 179
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.3e-38 Score=323.01 Aligned_cols=242 Identities=22% Similarity=0.342 Sum_probs=195.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||++.. .+|+.||+|.++... .....+.+|+.+++.++||||+++++++.+....++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 46899999999999995 479999999997653 2356788999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCCC--
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++ ++++.+||+|||+++.......
T Consensus 94 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 94 FDRILERG-----VYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp HHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 99986532 4899999999999999999999998 9999999999999 7888999999999976543321
Q ss_pred CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChH
Q 006055 528 PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVE 607 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 607 (663)
..++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+....... .. ....
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~---~~-----~~~~ 232 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET------ESKLFEKIKEGYYEF---ES-----PFWD 232 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHCCCCC---CT-----TTTT
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCC---Cc-----cccc
Confidence 236778999999999899999999999999999999999996432 222222322221100 00 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 608 EEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 608 ~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
....++.+++.+|+..||++|||++|++++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 233 DISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 233467888999999999999999999985
No 180
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=329.15 Aligned_cols=253 Identities=26% Similarity=0.424 Sum_probs=199.1
Q ss_pred hcccccccceEEEEEEe-----cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecC--ccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-----EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMD--EKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey 446 (663)
.+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|+++++.++||||+++++++...+ ..++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 46899999999999983 468999999997653 23467999999999999999999999987644 68999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 126 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 126 LPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp CTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 99999999997643 35899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCC------CCCC---hHHHHHHHHhhc
Q 006055 527 T-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNE------EGVD---LPRWVQSIVKDE 590 (663)
Q Consensus 527 ~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~------~~~~---~~~~~~~~~~~~ 590 (663)
. ..++..|+|||.+.+..++.++||||||+++|||++|..|+...... .... ....+...+...
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 1 23455699999998888899999999999999999999998642100 0000 000111111111
Q ss_pred ccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 591 WTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
. ..........++.+++.+||..||++|||+.|+++.|+++.+
T Consensus 280 ~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 280 G----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 011112234578889999999999999999999999998854
No 181
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.3e-39 Score=341.68 Aligned_cols=246 Identities=12% Similarity=0.031 Sum_probs=176.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc----CHHHHHHHHH---HhhcCCCCCcccce-------EEEEecC-
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI----SEREFKDKIE---GVGAVNHENLVPLR-------AYYYSMD- 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~e~~---~l~~l~h~niv~l~-------~~~~~~~- 438 (663)
.+.||+|+||+||+|.. .+|+.||||++..... ....+.+|+. .++. +||||++++ +++....
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 46899999999999995 4799999999987543 2345677754 5555 799977744 4544332
Q ss_pred ----------------ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCcceec
Q 006055 439 ----------------EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMR------SLIALGAARGIEYLHAQGPNVSHG 496 (663)
Q Consensus 439 ----------------~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~al~~LH~~~~~iiHr 496 (663)
..++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+++ |+||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivHr 218 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVHG 218 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEET
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--CccC
Confidence 3799999999 89999997532 12455555 788899999999999998 9999
Q ss_pred CCCCCCEEEcCCCceEEeccccccccCCCC-CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccC
Q 006055 497 NIKSSNILLTKSYEARVSDFGLAHLVGPSS-TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLN 573 (663)
Q Consensus 497 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~ 573 (663)
||||+|||++.++.+||+|||+++...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 3456688999999987 6789999999999999999999999986532
Q ss_pred CCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 574 EEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...... ............. ...........+.+++.+||+.||++|||+.|++++
T Consensus 299 ~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 299 GIKGSW--------KRPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TCTTCC--------CBCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred ccccch--------hhhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 211000 0000000000000 011111234567888899999999999999999863
No 182
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.6e-38 Score=328.51 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEe------cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL------EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+++.||||.+.... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 46899999999999983 357789999996542 2346788999999999999999999999999999999999
Q ss_pred cCCCChhHhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccc
Q 006055 447 LTMGSLSALLHGNKGA--GRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHL 521 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~ 521 (663)
+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++. +..+||+|||+++.
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 9999999999864321 2245899999999999999999999998 999999999999984 44699999999975
Q ss_pred cCCCC------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhccccc
Q 006055 522 VGPSS------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSE 594 (663)
Q Consensus 522 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (663)
..... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+......
T Consensus 193 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~~~~-- 264 (327)
T 2yfx_A 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTSGGRM-- 264 (327)
T ss_dssp HHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTTCCC--
T ss_pred cccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------HHHHHHHHhcCCCC--
Confidence 43321 1234667999999988889999999999999999998 999986432 22222222222111
Q ss_pred ccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCC
Q 006055 595 VFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPS 644 (663)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~ 644 (663)
.........+.+++.+||..||++||++.|++++|+.+...
T Consensus 265 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 265 ---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 01112234678899999999999999999999999887544
No 183
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.4e-38 Score=320.96 Aligned_cols=239 Identities=24% Similarity=0.314 Sum_probs=196.8
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 468999999999999954 58899999986542 1245688999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 100 RSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 99999887532 5899999999999999999999998 9999999999999999999999999998764322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+..... ..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~------------~~ 234 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEY------------SI 234 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCC------------CC
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhhccC------------CC
Confidence 2346778999999998889999999999999999999999996432 2222222222111 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
+......+.+++.+|++.||++|||++|++++-
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 235 PKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 111223677888999999999999999999863
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-37 Score=342.38 Aligned_cols=241 Identities=23% Similarity=0.292 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc---ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV---TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|+||+||+|.. .+|+.||||++... ......+.+|+++++.++||||+++++++.+....++||||+.+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 46899999999999995 47999999998643 334678999999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc---CCCceEEeccccccccCCCC-
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT---KSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~---~~~~~kl~Dfg~a~~~~~~~- 526 (663)
+|.+.+.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++......
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 9999886532 4899999999999999999999998 99999999999995 45679999999998765442
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...+++.|+|||++.+ .++.++||||+||++|+|++|+.||... +....+..+......... +
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~--------~ 244 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK------NEYDILKRVETGKYAFDL--------P 244 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCSCS--------G
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCC--------c
Confidence 2457888999999976 4899999999999999999999999653 223333333332221110 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..||++|||+.|++++
T Consensus 245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111223467788899999999999999999986
No 185
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.7e-38 Score=328.38 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.+++.++||||+++++++.+....++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 468999999999999954 5899999998655333 356789999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----S 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~ 526 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 110 ~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 110 ILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp HHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred hHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 9998876432 4899999999999999999999998 999999999999999999999999999765442 2
Q ss_pred CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh--------------hc-
Q 006055 527 TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK--------------DE- 590 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------------~~- 590 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+.. ..
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI------DQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHHHhCCCChhhhhHhhhcc
Confidence 23467789999999775 6889999999999999999999999753221 11111110 00
Q ss_pred ccccccchhhhcccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 591 WTSEVFDLELLRYQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 591 ~~~~~~d~~~~~~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+........ ......+.+++.+|+..||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000000 1234578899999999999999999999875
No 186
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=323.89 Aligned_cols=243 Identities=24% Similarity=0.342 Sum_probs=193.3
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999994 568999999987653 33567899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-CCceEEeccccccccCCC----CCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVGPS----STP 528 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~~----~~~ 528 (663)
+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||++...... ...
T Consensus 108 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 183 (295)
T 2clq_A 108 ALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF 183 (295)
T ss_dssp HHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCC
T ss_pred HHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccccc
Confidence 9997643 2345678999999999999999999998 999999999999987 899999999999876542 233
Q ss_pred CCCccccCccccCCC--CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 529 NRVAGYRAPEVTDPC--KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 529 ~~~~~y~aPE~~~~~--~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
.++..|+|||++.+. .++.++||||||+++|||++|+.||....... ......... .... ...
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~-~~~~----------~~~ 248 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGMF-KVHP----------EIP 248 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHHH-CCCC----------CCC
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhccc-cccc----------ccc
Confidence 467789999998654 37889999999999999999999996532110 111111000 0000 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|+..||++||+++|++++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1233467888999999999999999999874
No 187
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=332.37 Aligned_cols=253 Identities=22% Similarity=0.302 Sum_probs=188.7
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC--HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS--EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||+||+|... +++.||||++...... ...+.+|+++++.++||||+++++++.+....++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 368999999999999954 7899999998754322 1245579999999999999999999999999999999998 59
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC----C
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS----T 527 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~----~ 527 (663)
|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 86 LKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 999887543 35899999999999999999999998 9999999999999999999999999998654332 2
Q ss_pred CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc---ccccch-hhhc
Q 006055 528 PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT---SEVFDL-ELLR 602 (663)
Q Consensus 528 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~-~~~~ 602 (663)
..++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+......... ...... ....
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 345778999999876 568999999999999999999999997532111 11111111111000 000000 0000
Q ss_pred -------cc----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 -------YQ----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 -------~~----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. .......++.+++.+|+..||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 001123467889999999999999999999984
No 188
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-37 Score=316.11 Aligned_cols=238 Identities=23% Similarity=0.336 Sum_probs=190.6
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +|+.||||.+... ......+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 468999999999999965 7999999998643 22356789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 96 GELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred CcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence 99999997532 4899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||.+.+..+ +.++||||||+++|+|++|+.||... +.......+...... .
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~------------~ 230 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE------HVPTLFKKIRGGVFY------------I 230 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC------------C
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHhhcCccc------------C
Confidence 2346777999999988765 57899999999999999999999642 222222222211100 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+......+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11123467788999999999999999999985
No 189
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-37 Score=324.72 Aligned_cols=246 Identities=19% Similarity=0.278 Sum_probs=192.1
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCcccceEEEEe--cCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENLVPLRAYYYS--MDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|. ..+++.||||+++.. ..+.+.+|+++++.++ ||||+++++++.+ ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 4689999999999998 467999999998743 3578999999999997 9999999999987 56689999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC-ceEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY-EARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.++++. +++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.......
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 99999863 788999999999999999999998 99999999999999777 899999999987654432
Q ss_pred -CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccccc----------c
Q 006055 528 -PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSE----------V 595 (663)
Q Consensus 528 -~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 595 (663)
..++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+..+........ .
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-----YDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-----HHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-----HHHHHHHHHhcCCchhhhHHHHhccc
Confidence 346777999999877 66899999999999999999999999542211 111111110000000 0
Q ss_pred cchh---------------hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLE---------------LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~---------------~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.++. ............++.+++.+|+..||++|||++|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000 00001111234578889999999999999999999984
No 190
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.5e-38 Score=328.20 Aligned_cols=248 Identities=19% Similarity=0.253 Sum_probs=186.9
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.++||+|+||+||+|. ..+|+.||||+++..... ...+.+|+++++.++||||+++++++.+....++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN- 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-
Confidence 4689999999999998 457999999999754322 35678999999999999999999999999999999999985
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-----CCCceEEeccccccccCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-----KSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-----~~~~~kl~Dfg~a~~~~~~ 525 (663)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 118 ~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 118 DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 9999997643 4899999999999999999999998 99999999999994 5556999999999876533
Q ss_pred C----CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc-ccc--ccc
Q 006055 526 S----TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW-TSE--VFD 597 (663)
Q Consensus 526 ~----~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~d 597 (663)
. ...++..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+..... ... ...
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE------IDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSTT
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH------HHHHHHHHHHhCCCchhhhhh
Confidence 2 23457789999999774 489999999999999999999999965321 222222221100 000 000
Q ss_pred --------hhhh--cccChH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 598 --------LELL--RYQNVE-----EEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 598 --------~~~~--~~~~~~-----~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.... ...... ....++.+++.+|++.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 000000 12356788999999999999999999987
No 191
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7.9e-38 Score=341.98 Aligned_cols=251 Identities=20% Similarity=0.256 Sum_probs=196.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCC-cccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHEN-LVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.++||+|+||.||+|.. .+++.||||++..... ...+..|++++..++|++ +..+..++.+.+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 46899999999999994 6799999998765432 235788999999998755 445555666777889999999 8999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC---
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
.+++.... ..+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 99997533 35899999999999999999999998 9999999999999 688999999999998765432
Q ss_pred --------CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 --------TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 --------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+...... ..+.
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~i~~~~~~-~~~~- 238 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKYEKISEKKVA-TSIE- 238 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS---HHHHHHHHHHHHHH-SCHH-
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh---HHHHHHHHhhcccc-ccHH-
Confidence 3346778999999999999999999999999999999999997643322 22222222211110 0000
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
.+ ......++.+++..||..+|++||++++|++.|+++..
T Consensus 239 ~l-----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 AL-----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HH-----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HH-----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 00 01223578899999999999999999999999998744
No 192
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=336.27 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=180.9
Q ss_pred hcccccccceEEEEEEec---CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE---MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~ 449 (663)
+++||+|+||+||+|... +++.||||++...... ..+.+|+.+++.++||||+++++++.. ....++||||+.+
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~ 104 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 104 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence 568999999999999965 5789999999765433 468899999999999999999999965 5678999999975
Q ss_pred CChhHhhccCC----CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE----cCCCceEEeccccccc
Q 006055 450 GSLSALLHGNK----GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL----TKSYEARVSDFGLAHL 521 (663)
Q Consensus 450 gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill----~~~~~~kl~Dfg~a~~ 521 (663)
+|.+++.... ......+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 8887775221 112235899999999999999999999998 9999999999999 7788999999999987
Q ss_pred cCCC-------CCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCC---CChHHHHHHHHhhc
Q 006055 522 VGPS-------STPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEG---VDLPRWVQSIVKDE 590 (663)
Q Consensus 522 ~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~ 590 (663)
.... ....++..|+|||++.+. .++.++|||||||++|||++|+.||........ ......+..+....
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~ 261 (405)
T 3rgf_A 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261 (405)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHH
T ss_pred cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhh
Confidence 6532 123467789999998874 589999999999999999999999975432110 01111222221110
Q ss_pred -cc--ccccch---------------hhhcccChHH--------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 591 -WT--SEVFDL---------------ELLRYQNVEE--------EMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 591 -~~--~~~~d~---------------~~~~~~~~~~--------~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.. ..+-+. .......... ...++.+++.+|+..||++|||++|+++|
T Consensus 262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00 000000 0000000000 03467789999999999999999999985
No 193
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-37 Score=339.50 Aligned_cols=182 Identities=24% Similarity=0.367 Sum_probs=146.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 445 (663)
.++||+|+||+||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++... ...++|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 46899999999999984 47999999998764322 46788999999999999999999998543 46899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+. |+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 138 IAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred ccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 985 6999998753 35899999999999999999999998 999999999999999999999999999876422
Q ss_pred C-------------------------------CCCCCccccCcccc-CCCCCCCcchhhhHHHHHHHHHhC
Q 006055 526 S-------------------------------TPNRVAGYRAPEVT-DPCKVSQKADVYSFGVLLLELLTG 564 (663)
Q Consensus 526 ~-------------------------------~~~~~~~y~aPE~~-~~~~~~~~~Dv~slGvvl~elltg 564 (663)
. ...+|..|+|||++ ....++.++|||||||++|||++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 1 12347779999976 566799999999999999999994
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-37 Score=343.56 Aligned_cols=241 Identities=25% Similarity=0.336 Sum_probs=198.6
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc----ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV----TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.++||+|+||.||+|... +|+.||||++... ......+.+|+.+++.++||||+++++++.+....++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 468999999999999954 7999999998654 23467899999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE---cCCCceEEeccccccccCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL---TKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 111 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 111 GELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 99999987533 4899999999999999999999998 9999999999999 567899999999998776543
Q ss_pred C---CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 527 T---PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 527 ~---~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
. ..+++.|+|||++.+ .++.++||||+||++|+|++|+.||... +....+..+.........
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~-------- 248 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA------NEYDILKKVEKGKYTFEL-------- 248 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCS--------
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCCCCC--------
Confidence 2 347888999999876 6899999999999999999999999653 223333333332221110
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.......++.+++.+|+..||++|||++|+++|
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0111233467788899999999999999999985
No 195
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.7e-37 Score=327.61 Aligned_cols=241 Identities=23% Similarity=0.374 Sum_probs=194.5
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCccc--C-------HHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI--S-------EREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~-------~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
+.||+|+||.||+|... +|+.||||++..... . .+.+.+|+.++..+ +||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 78999999999999964 799999999865421 1 34578899999998 8999999999999999999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 180 e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252 (365)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence 999999999999753 25899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC---CCCCCccccCccccCC------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 525 SS---TPNRVAGYRAPEVTDP------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+......
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~--- 323 (365)
T 2y7j_A 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMIMEGQYQ--- 323 (365)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---
T ss_pred CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCC---
Confidence 43 2457788999999853 357889999999999999999999996421 12222222222110
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .+ ......+.+++.+|+..||++|||++|++++
T Consensus 324 ~~~~--~~---~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 FSSP--EW---DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCHH--HH---SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCc--cc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 00 1123467888999999999999999999984
No 196
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=333.21 Aligned_cols=243 Identities=23% Similarity=0.295 Sum_probs=194.8
Q ss_pred hcccccccceEEEEEEe----cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL----EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||++.. .+|+.||||+++... .....+.+|++++..+ +||||+++++++......++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999996 478999999987532 2345677899999999 6999999999999999999999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 139 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 211 (355)
T ss_dssp CCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence 9999999999997532 4899999999999999999999998 99999999999999999999999999986543
Q ss_pred CC-----CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 525 SS-----TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 525 ~~-----~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .........+.....
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~------ 283 (355)
T 1vzo_A 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK--NSQAEISRRILKSEP------ 283 (355)
T ss_dssp GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC--CCHHHHHHHHHHCCC------
T ss_pred CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc--chHHHHHHHHhccCC------
Confidence 21 2246788999999986 34788999999999999999999999753322 222333333222111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRP-----SMSEVIKRI 638 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RP-----t~~ev~~~L 638 (663)
..+......+.+++.+|+..||++|| +++|++++.
T Consensus 284 ------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 ------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11112234677889999999999999 999999875
No 197
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.8e-37 Score=341.80 Aligned_cols=241 Identities=23% Similarity=0.314 Sum_probs=194.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--------------cCHHHHHHHHHHhhcCCCCCcccceEEEEecCc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--------------ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE 439 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 439 (663)
.++||+|+||+||+|.. .+++.||||+++... ...+.+.+|+.+++.++||||+++++++.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 46899999999999995 468999999987542 224678999999999999999999999999999
Q ss_pred cEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCC---ceEEecc
Q 006055 440 KLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSY---EARVSDF 516 (663)
Q Consensus 440 ~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~---~~kl~Df 516 (663)
.++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 999999999999999886532 4899999999999999999999998 99999999999998776 6999999
Q ss_pred ccccccCCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 517 GLAHLVGPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 517 g~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
|+++...... ...+++.|+|||++.+ .++.++||||+||++|+|++|+.||... +....+..+......
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~- 265 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ------NDQDIIKKVEKGKYY- 265 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCC-
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCC-
Confidence 9998775542 3457888999999874 5899999999999999999999999653 223333333332211
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
++.. .+ .....++.+++.+|+..||++|||++|++++
T Consensus 266 --~~~~--~~---~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 266 --FDFN--DW---KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp --CCHH--HH---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CCcc--cc---CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111 01 1123467888899999999999999999975
No 198
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.3e-37 Score=341.62 Aligned_cols=241 Identities=22% Similarity=0.309 Sum_probs=192.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|.. .++..||||++.... .....+.+|+.+++.++||||++++++|.+....++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 46899999999999995 478999999987542 23567899999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC---CceEEeccccccccCCCC-
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS---YEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~---~~~kl~Dfg~a~~~~~~~- 526 (663)
+|.+.+.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.. +.+||+|||+++......
T Consensus 122 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 122 ELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 9999886532 4899999999999999999999998 9999999999999764 459999999998765432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 527 --TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
...+++.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+........ .. .+
T Consensus 195 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~---~~--~~- 261 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEILRKVEKGKYTFD---SP--EW- 261 (494)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCC---SG--GG-
T ss_pred ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCC---ch--hc-
Confidence 3457888999999874 68999999999999999999999996532 2333333333221110 00 01
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.....++.+++.+|+..||++|||++|++++
T Consensus 262 --~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 262 --KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1223467788889999999999999999875
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.7e-38 Score=320.53 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=193.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEe--cCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYS--MDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||++.. .+|+.||+|.+...... .+.+.+|+++++.++||||+++++++.+ ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 36899999999999995 47899999999765332 4568899999999999999999998865 456899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---CcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG---PNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~---~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
+|+|.+++..... ....+++..++.++.|++.||.|||+.+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 91 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 9999999975321 1345899999999999999999999986 34999999999999999999999999999876543
Q ss_pred CC----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 526 ST----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 526 ~~----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
.. ..++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+.... ...
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~-~~~------- 235 (279)
T 2w5a_A 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIREGK-FRR------- 235 (279)
T ss_dssp CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTC-CCC-------
T ss_pred cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHHHHHHhhcc-ccc-------
Confidence 21 235777999999988889999999999999999999999996532 122222222221 111
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.......++.+++.+||+.||++|||++|+++++
T Consensus 236 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 236 ---IPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ---CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0112234678889999999999999999999854
No 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.9e-38 Score=321.73 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=190.7
Q ss_pred hcccccccceEEEEEEec--CCc--EEEEEEecCcc----cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE--MGT--IVAVKRLKDVT----ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||+||+|.+. +++ .||||.++... ...+.+.+|+++++.++||||+++++++.+. ..++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-CceeeEec
Confidence 468999999999999853 333 68999987542 2246788999999999999999999998765 48999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 102 APLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp CTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred ccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 99999999997532 24899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 T-------PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 ~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
. ..++..|+|||.+.+..++.++||||||+++|||++ |+.||... +....+..+.......
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~~~~~~----- 244 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL------NGSQILHKIDKEGERL----- 244 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTSCCCC-----
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC------CHHHHHHHHHccCCCC-----
Confidence 1 234557999999988888999999999999999999 99999643 2223333332221110
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCC
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSS 645 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~ 645 (663)
........++.+++.+|+..||++|||+.+++++|+++.+..
T Consensus 245 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 -----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -----CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 111223456888999999999999999999999999987654
No 201
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2e-37 Score=328.54 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=176.0
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec------CccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM------DEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 444 (663)
.+.||+|+||.||+|. ..+|+.||||++...... .+.+.+|+++++.++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 4689999999999998 467999999998754332 46788999999999999999999998654 5579999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 114 e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 114 HLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp ECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC---------
T ss_pred ccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 998 6799998864 24899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc------ccccc
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW------TSEVF 596 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 596 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ....+..+..... ...+.
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHhh
Confidence 32 3457788999999877 678999999999999999999999996532 2222222221100 00000
Q ss_pred chh-------hhc--ccCh----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLE-------LLR--YQNV----EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~-------~~~--~~~~----~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
... +.. .... ......+.+++.+|+..||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 000 0000 0123467888999999999999999999985
No 202
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.5e-37 Score=332.63 Aligned_cols=187 Identities=23% Similarity=0.357 Sum_probs=159.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e 445 (663)
.++||+|+||.||+|.. .+|+.||||+++..... .+.+.+|+++++.++||||+++++++... ...++|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 46899999999999994 56899999999764322 46788999999999999999999998766 56899999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+. |+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 111 IAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred cCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 987 5999999753 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred --------------------------CCCCCCccccCcccc-CCCCCCCcchhhhHHHHHHHHHhCCCCCc
Q 006055 526 --------------------------STPNRVAGYRAPEVT-DPCKVSQKADVYSFGVLLLELLTGKAPTH 569 (663)
Q Consensus 526 --------------------------~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slGvvl~elltg~~p~~ 569 (663)
....+|..|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 223467789999986 56679999999999999999998766654
No 203
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=326.69 Aligned_cols=251 Identities=24% Similarity=0.306 Sum_probs=192.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 46899999999999995 46899999998753221 246789999999999999999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC-
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 95 ET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp SE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred CC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 86 8988887532 35788899999999999999999998 9999999999999999999999999998764332
Q ss_pred ---CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc---cccccch-
Q 006055 527 ---TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW---TSEVFDL- 598 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~- 598 (663)
...++..|+|||++.+. .++.++|||||||++|||++|..||.... ....+..+..... ...+.+.
T Consensus 168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHcCCCChhhhhhhc
Confidence 23467789999998764 57899999999999999999999986532 2222222222110 0000000
Q ss_pred ---hhh---ccc--C----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 599 ---ELL---RYQ--N----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 599 ---~~~---~~~--~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
... ... . ......++.+++.+|+..||++|||++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 000 0 012235788899999999999999999999863
No 204
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.3e-38 Score=320.45 Aligned_cols=244 Identities=20% Similarity=0.323 Sum_probs=180.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||+||+|.. .+|+.||||+++..... .+.+.++...++.++||||+++++++.+.+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-
Confidence 46899999999999995 57999999999764322 23344555568888999999999999999999999999985
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.+++..... ....+++..+..++.|++.||.|||++ + |+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 88877753211 123589999999999999999999998 8 99999999999999999999999999987654322
Q ss_pred -CCCCccccCcccc----CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 -PNRVAGYRAPEVT----DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 -~~~~~~y~aPE~~----~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||++ .+..++.++||||||+++|||++|+.||.... .....+...........
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~-------- 234 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQL-------- 234 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHSCCCCC--------
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----chHHHHHHHhccCCCCc--------
Confidence 3467789999996 55678899999999999999999999996421 11222222222211110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|++.||++|||++|++++
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 011223467889999999999999999999883
No 205
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-37 Score=353.55 Aligned_cols=238 Identities=22% Similarity=0.283 Sum_probs=196.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCc----ccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDV----TISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.++||+|+||.||+|.. .+++.||||+++.. ......+..|..++..+ +||+|+++++++.+.+..++||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 46899999999999995 46889999999753 22345678889998887 79999999999999999999999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC---
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~--- 525 (663)
+|+|.++++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 498 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence 999999998533 4899999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 526 -STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 526 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+......
T Consensus 499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~~~~------------ 560 (674)
T 3pfq_A 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSIMEHNVA------------ 560 (674)
T ss_dssp BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHSSCCC------------
T ss_pred cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC------CHHHHHHHHHhCCCC------------
Confidence 2345788899999999999999999999999999999999999653 233344444432210
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSM-----SEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~-----~ev~~~ 637 (663)
.+.....++.+++.+|+..||++||++ +||++|
T Consensus 561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 111233467888889999999999998 777654
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.4e-38 Score=324.53 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=179.2
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCc--ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDV--TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|. ..+++.||||.+... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 4689999999999998 457899999998654 2334678899999999999999999999999999999999999999
Q ss_pred hhHhhccC---CCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC--
Q 006055 452 LSALLHGN---KGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS-- 526 (663)
Q Consensus 452 L~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 526 (663)
|.+++... .......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 99998631 1112345899999999999999999999998 9999999999999999999999999997654321
Q ss_pred -------CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 -------TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 -------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ........... .....
T Consensus 178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~-~~~~~- 249 (303)
T 2vwi_A 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM------KVLMLTLQNDP-PSLET- 249 (303)
T ss_dssp ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG------GHHHHHHTSSC-CCTTC-
T ss_pred cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh------hHHHHHhccCC-Ccccc-
Confidence 2246777999999865 46789999999999999999999999753221 11111111111 00000
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.............++.+++.+|+..||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000111223467888999999999999999999983
No 207
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.4e-37 Score=327.72 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=186.4
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC------------HHHHHHHHHHhhcCCCCCcccceEEEEecC----
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS------------EREFKDKIEGVGAVNHENLVPLRAYYYSMD---- 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 438 (663)
.+.||+|+||.||+|...+|+.||||++...... .+.+.+|+++++.++||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 4689999999999999888999999998643211 267899999999999999999999986533
Q ss_pred -ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 439 -EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 439 -~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
..++||||++ |+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCCCCEEEEecC
Confidence 4699999998 58888887432 35899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC---CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 518 LAHLVGPSS---TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 518 ~a~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
+++...... ...++..|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....+..+.......
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST------FYNQLNKIVEVVGTP 253 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCC
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCC
Confidence 997654332 2346777999999876 678999999999999999999999996532 122222221110000
Q ss_pred cccc------hh--------hhc--c----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVFD------LE--------LLR--Y----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~d------~~--------~~~--~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..-+ .. ... . .........+.+++.+|+..||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000 00 000 0 0001123467889999999999999999999985
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.1e-37 Score=316.85 Aligned_cols=250 Identities=24% Similarity=0.331 Sum_probs=192.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|... +|+.||||+++.... ....+.+|++++++++||||+++++++...+..++||||+. |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 367999999999999954 799999999865432 23678899999999999999999999999999999999998 5
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----C
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----S 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~ 526 (663)
+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 87 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (299)
T 2r3i_A 87 DLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161 (299)
T ss_dssp EHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred CHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccC
Confidence 9999987543 235889999999999999999999998 999999999999999999999999999776433 2
Q ss_pred CCCCCccccCccccCCCC-CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc-cccccc--------
Q 006055 527 TPNRVAGYRAPEVTDPCK-VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE-WTSEVF-------- 596 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------- 596 (663)
...++..|+|||.+.+.. ++.++||||||+++|||++|+.||..... ......+.... ......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE------IDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp SCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 234677899999998765 78999999999999999999999975321 22222222210 000000
Q ss_pred --chhhhcc--cC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 597 --DLELLRY--QN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 597 --d~~~~~~--~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.+..... .. ......++.+++.+|+..||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00 0112356788999999999999999999998
No 209
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.7e-37 Score=330.13 Aligned_cols=257 Identities=21% Similarity=0.285 Sum_probs=196.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-----------CCCcccceEEEEecC----
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-----------HENLVPLRAYYYSMD---- 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~~---- 438 (663)
.+.||+|+||+||+|.. .+++.||||++.........+.+|++++.+++ |+||+++++++....
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 46899999999999994 67999999999866555677889999988876 899999999987654
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEc------CCCce
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLT------KSYEA 511 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~------~~~~~ 511 (663)
..++||||+ +++|.+++.... ...+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+.+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccCCCcCcceE
Confidence 679999999 889999997643 23489999999999999999999998 8 99999999999994 44479
Q ss_pred EEeccccccccCCC-CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhc
Q 006055 512 RVSDFGLAHLVGPS-STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDE 590 (663)
Q Consensus 512 kl~Dfg~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 590 (663)
||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||..............+..+....
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 99999999876544 23457888999999999889999999999999999999999998643322221122222211100
Q ss_pred --cccc----------cc------------------chhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 591 --WTSE----------VF------------------DLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 591 --~~~~----------~~------------------d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .+ +..............++.+++.+|+..||++|||++|++++
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0000 00 00000112335667789999999999999999999999985
No 210
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.9e-37 Score=318.45 Aligned_cols=242 Identities=22% Similarity=0.358 Sum_probs=191.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
.+.||+|+||.||+|... +|+.||+|.+... ......+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 467999999999999964 5899999998754 33457889999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC----CCCCC
Q 006055 453 SALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG----PSSTP 528 (663)
Q Consensus 453 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~----~~~~~ 528 (663)
.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.... .....
T Consensus 104 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 104 DAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 99886532 34899999999999999999999998 9999999999999999999999999875421 12334
Q ss_pred CCCccccCcccc-----CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcc
Q 006055 529 NRVAGYRAPEVT-----DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRY 603 (663)
Q Consensus 529 ~~~~~y~aPE~~-----~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 603 (663)
.++..|+|||++ .+..++.++||||||+++|||++|+.||.... .............. ...
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~~------- 243 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSDPP-TLL------- 243 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CCS-------
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhccCCc-ccC-------
Confidence 577889999998 46678899999999999999999999996432 22222222222111 110
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 604 QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 604 ~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..||++|||++|++++
T Consensus 244 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 -TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111223467889999999999999999999873
No 211
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=323.68 Aligned_cols=242 Identities=25% Similarity=0.392 Sum_probs=190.7
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEe------cCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYS------MDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||++.........+.+|+.++.++ +||||+++++++.. ....++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 46899999999999995 5799999999977666667899999999998 89999999999987 4578999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~- 525 (663)
+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 183 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence 99999999997543 235899999999999999999999998 999999999999999999999999999866432
Q ss_pred ---CCCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 ---STPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ---~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
....++..|+|||++. +..++.++|||||||++|||++|+.||.... .......+..... ....
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~~~- 255 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------PMRALFLIPRNPA-PRLK- 255 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCC-CCCS-
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhcCcc-ccCC-
Confidence 2234677899999987 5568899999999999999999999996432 1111222211111 0000
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......+.+++.+|+..||++|||++|++++
T Consensus 256 --------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 --------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp --------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred --------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01123467888899999999999999999884
No 212
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.3e-38 Score=329.53 Aligned_cols=253 Identities=20% Similarity=0.261 Sum_probs=190.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEec--------CccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSM--------DEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~l 442 (663)
.+.||+|+||+||+|.. .+|+.||||++.... .....+.+|+++++.++||||+++++++... ...++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46899999999999995 679999999986542 2245788999999999999999999999774 45799
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+++ +|.+.+.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 9999986 7777776432 34899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC--------CCCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 523 GPS--------STPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 523 ~~~--------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+..........
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---HQLALISQLCGSITPE 251 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTT
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChh
Confidence 422 12235778999999876 45799999999999999999999999753211 1111111111110000
Q ss_pred cccc---hhhh--------cccChHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 594 EVFD---LELL--------RYQNVEEE------MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 594 ~~~d---~~~~--------~~~~~~~~------~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .... ......+. ...+.+++.+|+..||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000 0000 00011111 2357889999999999999999999984
No 213
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=317.32 Aligned_cols=241 Identities=25% Similarity=0.393 Sum_probs=193.0
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+.||+|+||.||+|... +|+.||||.+.... ....+.+|+.++..++||||+++++++......++||||+++|+|.
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 468999999999999954 59999999987643 3467889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC----CCCC
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS----STPN 529 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 529 (663)
+++.... ..+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 113 ~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 186 (314)
T 3com_A 113 DIIRLRN----KTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 186 (314)
T ss_dssp HHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccC
Confidence 9986322 35899999999999999999999998 999999999999999999999999999766443 2234
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ........... ..... ......
T Consensus 187 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~~~--------~~~~~~ 251 (314)
T 3com_A 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH------PMRAIFMIPTN-PPPTF--------RKPELW 251 (314)
T ss_dssp SCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS-CCCCC--------SSGGGS
T ss_pred CCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcC-CCccc--------CCcccC
Confidence 6778999999999889999999999999999999999996432 11111111111 11111 011122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
...+.+++.+|+..||++|||+.|++++
T Consensus 252 ~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 252 SDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 3467889999999999999999999874
No 214
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=315.58 Aligned_cols=240 Identities=24% Similarity=0.354 Sum_probs=190.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc-----cCHHHHHHHHHHhhcCCCCCcccceEEEE--ecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT-----ISEREFKDKIEGVGAVNHENLVPLRAYYY--SMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~ey 446 (663)
.+.||+|+||.||++.. .+++.||||.++... .....+.+|+++++.++||||+++++++. +....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 36899999999999995 568999999987542 23567999999999999999999999984 44578999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
++++ |.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp CSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred ccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 9986 777776433 245899999999999999999999998 9999999999999999999999999998765321
Q ss_pred ------CCCCCccccCccccCCCC--CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccch
Q 006055 527 ------TPNRVAGYRAPEVTDPCK--VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDL 598 (663)
Q Consensus 527 ------~~~~~~~y~aPE~~~~~~--~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 598 (663)
...++..|+|||++.+.. ++.++||||||+++|||++|+.||... +.......+.....
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~i~~~~~------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD------NIYKLFENIGKGSY------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHCCC-------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHhcCCC-------
Confidence 234677899999987644 377899999999999999999999642 22333333222211
Q ss_pred hhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 599 ELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 599 ~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.........+.+++.+|+..||++|||++|++++-
T Consensus 231 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 231 -----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp -----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred -----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00112234677889999999999999999999863
No 215
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.7e-37 Score=321.87 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEe--cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCC------CcccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL--EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHE------NLVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||+++........+.+|++++..++|+ +++++++++...+..++||||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 36899999999999985 3689999999986554456788899998888665 499999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-------------------
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK------------------- 507 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~------------------- 507 (663)
+ +++|.+++.... ..++++..+..++.|++.||+|||+++ |+||||||+||+++.
T Consensus 99 ~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 99 L-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp C-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred C-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 9 889999997643 245899999999999999999999998 999999999999987
Q ss_pred CCceEEeccccccccCCCC-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHH
Q 006055 508 SYEARVSDFGLAHLVGPSS-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
++.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+...
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~ 249 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE---HLAMMERI 249 (339)
T ss_dssp CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---HHHHHHHH
T ss_pred CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHH
Confidence 6689999999998765443 3457888999999999899999999999999999999999997532211 11111111
Q ss_pred Hhhc--------ccccccc---------------------hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 587 VKDE--------WTSEVFD---------------------LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 587 ~~~~--------~~~~~~d---------------------~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.... .....+. ..............++.+++.+|+..||++|||++|++++
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 1000 0000000 0000001123446678999999999999999999999875
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8.8e-37 Score=324.48 Aligned_cols=248 Identities=21% Similarity=0.283 Sum_probs=186.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++.... ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 46899999999999984 56899999999764322 356889999999999999999999997654 579999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+++ +|.+++.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 110 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp ECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 99985 78888852 3789999999999999999999998 99999999999999999999999999987654
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh------------
Q 006055 525 SS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD------------ 589 (663)
Q Consensus 525 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 589 (663)
.. ...++..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+...
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH------IDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHHh
Confidence 32 23467789999999998999999999999999999999999975321 1111121111
Q ss_pred ----------cccccccchh-----hh-cc--cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 590 ----------EWTSEVFDLE-----LL-RY--QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 590 ----------~~~~~~~d~~-----~~-~~--~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.......... .. .. ........++.+++.+|+..||++|||++|++++-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000000 00 00 00122356788999999999999999999999864
No 217
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.9e-37 Score=324.86 Aligned_cols=247 Identities=22% Similarity=0.319 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCcc------EEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEK------LLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++...... ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 46899999999999984 57999999999765333 46788999999999999999999999876654 9999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+. ++|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 127 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 127 PFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp ECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred cccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 9998 589888742 3899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc------cccc
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT------SEVF 596 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 596 (663)
.. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ....+..+...... ....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCcHHHHHHhh
Confidence 43 3456888999999877 678999999999999999999999996532 22222222211000 0000
Q ss_pred ch-------hhhc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DL-------ELLR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~-------~~~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+. .... ... ......++.+++.+|+..||++|||++|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 0000 000 01124578889999999999999999999986
No 218
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-37 Score=325.67 Aligned_cols=252 Identities=17% Similarity=0.261 Sum_probs=197.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC------------------HHHHHHHHHHhhcCCCCCcccceEEEEe
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS------------------EREFKDKIEGVGAVNHENLVPLRAYYYS 436 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~~~~e~~~l~~l~h~niv~l~~~~~~ 436 (663)
.+.||+|+||.||+|.. +|+.||||.+...... ...+.+|+.+++.++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 46899999999999999 8999999998654211 1789999999999999999999999999
Q ss_pred cCccEEEEEccCCCChhHh------hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCC
Q 006055 437 MDEKLLVYDYLTMGSLSAL------LHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSY 509 (663)
Q Consensus 437 ~~~~~lv~ey~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~ 509 (663)
.+..++||||+++|+|.++ +.... ...+++..+..++.|++.||.|||+ .+ |+||||||+||+++.++
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEECTTS
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEEcCCC
Confidence 9999999999999999998 54321 3468999999999999999999999 87 99999999999999999
Q ss_pred ceEEeccccccccCCC--CCCCCCccccCccccCCC-CCCC-cchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHH
Q 006055 510 EARVSDFGLAHLVGPS--STPNRVAGYRAPEVTDPC-KVSQ-KADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQS 585 (663)
Q Consensus 510 ~~kl~Dfg~a~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 585 (663)
.+||+|||.+...... ....++..|+|||.+.+. .++. ++||||||+++|||++|+.||...... ......
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~ 264 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELFNN 264 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHHHH
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHH
Confidence 9999999999875443 234577889999999877 5655 899999999999999999999753221 222222
Q ss_pred HHhhcccccc----cchhhhc---ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 586 IVKDEWTSEV----FDLELLR---YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 586 ~~~~~~~~~~----~d~~~~~---~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+......... ....... .........++.+++.+|+..||++|||++|++++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2222110000 0000000 00002234578889999999999999999999983
No 219
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=324.15 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=190.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc---CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
.+.||+|+||.||+|.... .||+|.++.... ..+.+.+|+.+++.++||||+++++++.+....++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 4689999999999998753 599999875422 23567889999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS------ 525 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~------ 525 (663)
|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 116 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 116 LYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp HHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 999997532 35889999999999999999999998 99999999999998 679999999998754321
Q ss_pred ---CCCCCCccccCccccCC---------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 526 ---STPNRVAGYRAPEVTDP---------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 526 ---~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... .......+..... .
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~-~ 261 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP------AEAIIWQMGTGMK-P 261 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC------HHHHHHHHHTTCC-C
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHhccCCC-C
Confidence 11236677999999864 347889999999999999999999996432 1222222221111 1
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCCCC
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSSTQG 648 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~~~ 648 (663)
.... .....++.+++.+||..||++|||+.|++++|+++.......
T Consensus 262 ~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 262 NLSQ---------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp CCCC---------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred CCCc---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 1100 012235778899999999999999999999999997765443
No 220
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-37 Score=326.20 Aligned_cols=244 Identities=20% Similarity=0.328 Sum_probs=191.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC--HHHHHHHHHH-hhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS--EREFKDKIEG-VGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||||+++..... ...+..|... ++.++||||+++++++.+.+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 36799999999999995 67999999999765333 3445555555 7888999999999999999999999999986
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
+|.+++..... ....+++..+..++.||+.||.|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888763210 123589999999999999999999987 7 9999999999999999999999999998765431
Q ss_pred CCCCCccccCccccC----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 527 TPNRVAGYRAPEVTD----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
...++..|+|||++. ...++.++|||||||++|||++|+.||.... .....+...........
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~-------- 278 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQL-------- 278 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHSCCCCC--------
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-----chHHHHHHHhcCCCCCC--------
Confidence 135778899999964 3468899999999999999999999996422 11222222222211110
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+||..||++|||+.|++++
T Consensus 279 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 011223468889999999999999999999984
No 221
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.3e-37 Score=325.38 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=191.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++..++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 46899999999999994 4789999999975432 236788999999999999999999999765 357999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC-
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS- 525 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~- 525 (663)
+.+ +|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~-~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 112 MET-DLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CSE-EHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred cCc-CHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 984 999998753 3899999999999999999999998 999999999999999999999999999876532
Q ss_pred ------CCCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc---ccc
Q 006055 526 ------STPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT---SEV 595 (663)
Q Consensus 526 ------~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 595 (663)
....++..|+|||++. +..++.++|||||||++|||++|+.||......+ ....+......... ...
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHHHTC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHh
Confidence 2235678899999864 4558999999999999999999999997543211 11111111110000 000
Q ss_pred cchhh-------hc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLEL-------LR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~-------~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.+... .. ... ......++.+++.+|+..||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00 000 01123467889999999999999999999984
No 222
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.5e-37 Score=324.65 Aligned_cols=258 Identities=22% Similarity=0.312 Sum_probs=182.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCc-------cEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE-------KLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-------~~lv~ey 446 (663)
.+.||+|+||+||+|.. .+|+.||||++.........+.++++.+..++||||+++++++..... .++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 46799999999999995 568999999987654444566778888889999999999999976544 7899999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCcceecCCCCCCEEEcC-CCceEEeccccccccC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH--AQGPNVSHGNIKSSNILLTK-SYEARVSDFGLAHLVG 523 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--~~~~~iiHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~ 523 (663)
+++ +|.+.+.... .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 108 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~ 183 (360)
T 3e3p_A 108 VPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183 (360)
T ss_dssp CSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETTTTEEEECCCTTCBCCC
T ss_pred ccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCCCCcEEEeeCCCceecC
Confidence 987 5544433211 11345889999999999999999999 777 999999999999997 8999999999998775
Q ss_pred CCC---CCCCCccccCccccCCCC-CCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc-------
Q 006055 524 PSS---TPNRVAGYRAPEVTDPCK-VSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT------- 592 (663)
Q Consensus 524 ~~~---~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 592 (663)
... ...++..|+|||++.+.. ++.++|||||||++|||++|+.||..... ...+..+.+....
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3e3p_A 184 PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS------AGQLHEIVRVLGCPSREVLR 257 (360)
T ss_dssp TTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCHHHHH
T ss_pred CCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh------HHHHHHHHHHcCCCCHHHHH
Confidence 543 234677899999986654 89999999999999999999999975321 1222222211000
Q ss_pred ---ccccchhhh----------cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhC
Q 006055 593 ---SEVFDLELL----------RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELH 642 (663)
Q Consensus 593 ---~~~~d~~~~----------~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~ 642 (663)
....+.... ..........++.+++.+|++.||++|||+.|+++| ++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 000000000 000111235678899999999999999999999985 44443
No 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-37 Score=330.52 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=186.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecC---------------
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMD--------------- 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------------- 438 (663)
.+.||+|+||+||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++....
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 46899999999999984 679999999986542 22347999999999999999999985432
Q ss_pred -----------------------ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCccee
Q 006055 439 -----------------------EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSH 495 (663)
Q Consensus 439 -----------------------~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiH 495 (663)
..++||||+++ +|.+.+..... ....+++..+..++.||+.||.|||+.+ |+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--i~H 164 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG--ICH 164 (383)
T ss_dssp ---------------------CCEEEEEECCCSE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT--EEC
T ss_pred ccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc--Ccc
Confidence 37899999984 88777753211 1235899999999999999999999998 999
Q ss_pred cCCCCCCEEEc-CCCceEEeccccccccCCCC---CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCcc
Q 006055 496 GNIKSSNILLT-KSYEARVSDFGLAHLVGPSS---TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHA 570 (663)
Q Consensus 496 rdlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~---~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~ 570 (663)
|||||+||+++ .++.+||+|||+++...... ...++..|+|||.+.+. .++.++||||+||++|||++|+.||..
T Consensus 165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 244 (383)
T 3eb0_A 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244 (383)
T ss_dssp SCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCC
Confidence 99999999998 68899999999998765433 33467779999998765 489999999999999999999999975
Q ss_pred ccCCCCCChHHHHHHHHhhcc---ccccc--ch--------hh----hcccChHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 006055 571 LLNEEGVDLPRWVQSIVKDEW---TSEVF--DL--------EL----LRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSE 633 (663)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~---~~~~~--d~--------~~----~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~e 633 (663)
... ...+..++.... ...+. ++ .. ...........++.+++.+|+..||++|||+.|
T Consensus 245 ~~~------~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 245 ETS------IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SSH------HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCh------HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 321 222222221100 00000 00 00 000011123446889999999999999999999
Q ss_pred HHHH
Q 006055 634 VIKR 637 (663)
Q Consensus 634 v~~~ 637 (663)
+++|
T Consensus 319 ~l~h 322 (383)
T 3eb0_A 319 AMAH 322 (383)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9864
No 224
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6e-37 Score=315.46 Aligned_cols=241 Identities=21% Similarity=0.294 Sum_probs=195.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc----------cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT----------ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 442 (663)
.+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++.+++ ||||+++++++......++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 36899999999999995 468999999986542 11356788999999995 9999999999999999999
Q ss_pred EEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 443 VYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 443 v~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999999753 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC---CCCCCccccCccccC------CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccc
Q 006055 523 GPSS---TPNRVAGYRAPEVTD------PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTS 593 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~------~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (663)
.... ...++..|+|||++. ...++.++||||||+++|||++|+.||.... .......+.......
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~ 248 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQF 248 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCC
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc------HHHHHHHHhcCCccc
Confidence 5433 234677899999874 4567889999999999999999999996432 222223322222110
Q ss_pred cccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 594 EVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 594 ~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
. .........++.+++.+|+..||++|||++|+++
T Consensus 249 ~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 249 G--------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C--------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred C--------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 0111223456888999999999999999999987
No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.6e-37 Score=333.83 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=185.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecC------ccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMD------EKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ey~ 447 (663)
.++||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||++++++|.... ..++||||+
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~ 135 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcc
Confidence 46899999999999996 469999999986542 22347999999999999999999986432 257899999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-CceEEeccccccccCCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-YEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~ 526 (663)
++ ++.+.+.... .....+++..++.++.||++||.|||+.+ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 136 ~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~ 211 (420)
T 1j1b_A 136 PE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211 (420)
T ss_dssp CE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchhhhhcccCC
Confidence 86 6666554211 11245899999999999999999999998 9999999999999965 568999999998764432
Q ss_pred ---CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc-----------
Q 006055 527 ---TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW----------- 591 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 591 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..++....
T Consensus 212 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~------~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG------VDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCSCCHHHHHHHC
T ss_pred CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHhhC
Confidence 34567789999998764 789999999999999999999999975321 122222221100
Q ss_pred --cccccchhhhcc----cChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 592 --TSEVFDLELLRY----QNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 592 --~~~~~d~~~~~~----~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+..-+..... ........++.+++.+|+..||++|||+.|+++|
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000000000 0001123568889999999999999999999975
No 226
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.7e-37 Score=320.92 Aligned_cols=242 Identities=24% Similarity=0.359 Sum_probs=188.5
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc---------CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI---------SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||+|.. .+++.||||.+..... ....+.+|+++++.++||||+++++++... ..++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-ceEEEE
Confidence 46899999999999995 4689999999865321 123588999999999999999999998654 489999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEeccccccc
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHL 521 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~ 521 (663)
||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++.
T Consensus 94 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 94 ELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp ECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 999999999998753 35899999999999999999999998 999999999999987665 99999999987
Q ss_pred cCCCC---CCCCCccccCcccc---CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccc
Q 006055 522 VGPSS---TPNRVAGYRAPEVT---DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEV 595 (663)
Q Consensus 522 ~~~~~---~~~~~~~y~aPE~~---~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (663)
..... ...++..|+|||++ ....++.++|||||||++|||++|+.||....... .+...+ ......
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~----~~~~~~-- 238 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYN-- 238 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHH----HHTCCC--
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHH----HhCccc--
Confidence 75432 12367789999996 35678899999999999999999999997543221 121111 111100
Q ss_pred cchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 596 FDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 596 ~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+.. ......++.+++.+|+..||++|||++|++++
T Consensus 239 ~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 239 FIPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCchh-----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 00110 01123467889999999999999999999863
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.3e-37 Score=347.82 Aligned_cols=245 Identities=22% Similarity=0.346 Sum_probs=197.5
Q ss_pred hcccccccceEEEEEEec----CCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLE----MGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~ 448 (663)
.+.||+|+||.||+|... .+..||||.++.... ..+.+.+|+.+++.++||||+++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 568999999999999863 256799999875432 2367899999999999999999999984 467899999999
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST- 527 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 527 (663)
+|+|.++++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 474 ~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 547 (656)
T 2j0j_A 474 LGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547 (656)
T ss_dssp TCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred CCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence 999999997543 35899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ----CCCCccccCccccCCCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 ----PNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+......
T Consensus 548 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~~~~~i~~~~~~---------- 611 (656)
T 2j0j_A 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVIGRIENGERL---------- 611 (656)
T ss_dssp ------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHHTCCC----------
T ss_pred eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHcCCCC----------
Confidence 224567999999988889999999999999999997 999996532 22222222222111
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCC
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHP 643 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~ 643 (663)
..+......+.+++.+||..||++|||+.|+++.|+++.+
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0111233468889999999999999999999999998743
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-36 Score=324.24 Aligned_cols=193 Identities=24% Similarity=0.333 Sum_probs=164.0
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CC-----CcccceEEEEecCccEEEEEcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HE-----NLVPLRAYYYSMDEKLLVYDYL 447 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~~lv~ey~ 447 (663)
.+.||+|+||+||+|.. .+++.||||+++........+..|+.++..++ |+ +++++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 46899999999999995 46899999999865444567778888888774 44 4999999999999999999999
Q ss_pred CCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc--CCCceEEeccccccccCCC
Q 006055 448 TMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT--KSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 448 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~--~~~~~kl~Dfg~a~~~~~~ 525 (663)
. |+|.+++.... ...+++..+..++.|++.||.|||.+...|+||||||+|||++ .++.+||+|||+++.....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~ 214 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 214 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc
Confidence 6 59999997643 2358999999999999999999995322399999999999995 4778999999999877654
Q ss_pred C-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 526 S-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 526 ~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
. ...++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 215 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 215 IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 345788899999999999999999999999999999999999753
No 229
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.4e-37 Score=329.27 Aligned_cols=256 Identities=24% Similarity=0.319 Sum_probs=188.6
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEecCc------cEEEEEccC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE------KLLVYDYLT 448 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ey~~ 448 (663)
.++||+|+||+||+|....+..||+|++..... ...+|+++++.++||||+++++++..... .++||||++
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~ 121 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC
Confidence 468999999999999987777799998865422 22468999999999999999999876543 789999998
Q ss_pred CCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEeccccccccCCCC-
Q 006055 449 MGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 449 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~- 526 (663)
++.+....+... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++......
T Consensus 122 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 122 ETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp EEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred ccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 754443332111 1235899999999999999999999998 99999999999999 79999999999998764432
Q ss_pred --CCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc----------c
Q 006055 527 --TPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT----------S 593 (663)
Q Consensus 527 --~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 593 (663)
...++..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+...... .
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~------~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG------IDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHhhCh
Confidence 34467789999998764 589999999999999999999999975321 1222222111000 0
Q ss_pred cccchhhh--ccc-----ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhhCC
Q 006055 594 EVFDLELL--RYQ-----NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR--IEELHP 643 (663)
Q Consensus 594 ~~~d~~~~--~~~-----~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~--L~~~~~ 643 (663)
........ ... .......++.+++.+|+..||++|||+.|+++| ++++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 00000000 000 001133578899999999999999999999986 444433
No 230
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.5e-37 Score=323.00 Aligned_cols=245 Identities=22% Similarity=0.294 Sum_probs=168.7
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe----cCccEEEEEccCCC
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS----MDEKLLVYDYLTMG 450 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~g 450 (663)
++||+|+||+||+|... +|+.||||++.... ....+....+..++||||+++++++.. ....++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg 111 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG 111 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence 56999999999999955 79999999986542 222333334567799999999999876 34479999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC-
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~- 526 (663)
+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 112 ~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~ 186 (336)
T 3fhr_A 112 ELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186 (336)
T ss_dssp EHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred CHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccceecccccc
Confidence 9999998643 246899999999999999999999998 999999999999986 4459999999998765432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 527 -TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 527 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
...++..|+|||++.+..++.++||||||+++|+|++|+.||......... ......+..... .. ....
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~-----~~---~~~~ 256 (336)
T 3fhr_A 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLGQY-----GF---PNPE 256 (336)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CC---CTTT
T ss_pred ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhcccc-----cc---Cchh
Confidence 334677899999998888899999999999999999999999754322110 000000000000 00 0001
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
......++.+++.+|+..||++|||++|++++-
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 112344678889999999999999999999843
No 231
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.4e-37 Score=334.37 Aligned_cols=245 Identities=21% Similarity=0.294 Sum_probs=184.0
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||+|+||+||.+...+|+.||||++.... ...+.+|+.++..+ +||||+++++++.+....++||||+. |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 36799999999987777789999999986532 45678899999876 89999999999999999999999996 6999
Q ss_pred HhhccCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC-------------CceEEecccc
Q 006055 454 ALLHGNKGAGR--TPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS-------------YEARVSDFGL 518 (663)
Q Consensus 454 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~-------------~~~kl~Dfg~ 518 (663)
+++........ ....+..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 99986432111 11133445789999999999999998 9999999999999754 4899999999
Q ss_pred ccccCCCC--------CCCCCccccCccccCC-------CCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHH
Q 006055 519 AHLVGPSS--------TPNRVAGYRAPEVTDP-------CKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRW 582 (663)
Q Consensus 519 a~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 582 (663)
++...... ...++.+|+|||++.+ ..++.++|||||||++|||++ |+.||......+
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------- 247 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------- 247 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-------
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-------
Confidence 98775432 2346788999999865 568899999999999999999 999996432110
Q ss_pred HHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 583 VQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 583 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..+......... ...........++.+++.+|+..||++|||+.||+++
T Consensus 248 -~~i~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -SNIIRGIFSLDE-----MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HHHHHTCCCCCC-----CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHhcCCCCccc-----ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 112221111100 0111223455678899999999999999999999863
No 232
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=316.55 Aligned_cols=248 Identities=21% Similarity=0.312 Sum_probs=182.9
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCCCcccceEEEE--------------ecC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHENLVPLRAYYY--------------SMD 438 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------------~~~ 438 (663)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+++++.++||||+++++++. +..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 368999999999999965 59999999987543 23467889999999999999999999873 335
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEeccc
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFG 517 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg 517 (663)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEEEccCc
Confidence 6789999998 599999964 24889999999999999999999998 99999999999997 56799999999
Q ss_pred cccccCCCCC-------CCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh
Q 006055 518 LAHLVGPSST-------PNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD 589 (663)
Q Consensus 518 ~a~~~~~~~~-------~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 589 (663)
+++....... ..++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~~ 240 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE------LEQMQLILES 240 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHH
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHh
Confidence 9987643211 124667999998754 6789999999999999999999999975321 2222222221
Q ss_pred ccccc-------------ccchhhhcc-cC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 590 EWTSE-------------VFDLELLRY-QN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 590 ~~~~~-------------~~d~~~~~~-~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
..... ......... .. ......++.+++.+|++.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 10000 000000000 00 01224578889999999999999999999884
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9e-37 Score=314.49 Aligned_cols=240 Identities=22% Similarity=0.342 Sum_probs=186.2
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcccceEEEEe-------------cCcc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLVPLRAYYYS-------------MDEK 440 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------------~~~~ 440 (663)
.+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+.+++.++||||+++++++.+ ....
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence 46899999999999995 579999999997654445778999999999999999999999865 3457
Q ss_pred EEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 441 LLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 441 ~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
++||||+++|+|.++++... ..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 91 FIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred EEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 89999999999999997532 34788999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCC------------------CCCCCCccccCccccCCC-CCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHH
Q 006055 521 LVGPS------------------STPNRVAGYRAPEVTDPC-KVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPR 581 (663)
Q Consensus 521 ~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~ 581 (663)
..... ....++..|+|||.+.+. .++.++|||||||++|||++ ||.... +...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~~~ 236 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ERVN 236 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hHHH
Confidence 65422 112356779999999764 68999999999999999998 553211 1111
Q ss_pred HHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 582 WVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 582 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
....+..... .+. ..........+.+++.+|+..||++|||++|+++
T Consensus 237 ~~~~~~~~~~---~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSI---EFP-----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTC---CCC-----TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcccccc---ccC-----ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111111100 000 0111223346788899999999999999999998
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=317.54 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=189.3
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCc------cEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDE------KLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ 444 (663)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++..... .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 36799999999999995 56999999999765333 3568899999999999999999999987654 49999
Q ss_pred EccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCC
Q 006055 445 DYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGP 524 (663)
Q Consensus 445 ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 524 (663)
||+. |+|.+++.. .+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 109 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp ECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred cccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9998 588887742 3899999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CCCCCccccCccccCC-CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcc------ccccc
Q 006055 525 SS-TPNRVAGYRAPEVTDP-CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEW------TSEVF 596 (663)
Q Consensus 525 ~~-~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 596 (663)
.. ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ....+..+..... ...+.
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD------YLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC------HHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHHHh
Confidence 32 2356788999999876 678999999999999999999999997532 1222222221100 00000
Q ss_pred chh-------hh-----c-ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 597 DLE-------LL-----R-YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 597 d~~-------~~-----~-~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
+.. +. . .........++.+++.+|+..||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00 0 00011234578889999999999999999999985
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.1e-36 Score=308.52 Aligned_cols=241 Identities=23% Similarity=0.286 Sum_probs=194.5
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcc---cCHHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT---ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|... +++.||||++.... .....+.+|++++++++||||+++++++.+....++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 468999999999999964 79999999986542 34678999999999999999999999999999999999999999
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCC---CceEEeccccccccCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKS---YEARVSDFGLAHLVGPSST 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~---~~~kl~Dfg~a~~~~~~~~ 527 (663)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.+ +.+||+|||++........
T Consensus 107 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 9999886432 4899999999999999999999998 9999999999999754 4699999999987655432
Q ss_pred C---CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhccc
Q 006055 528 P---NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQ 604 (663)
Q Consensus 528 ~---~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 604 (663)
. .++..|+|||.+.+. ++.++||||||+++|+|++|+.||.... .......+........ . .
T Consensus 180 ~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~-----~---~ 244 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKYAFD-----L---P 244 (287)
T ss_dssp CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCC-----S---G
T ss_pred cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCC-----c---h
Confidence 2 245679999998764 8899999999999999999999996532 2223333322211110 0 0
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 605 NVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 605 ~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.......++.+++.+|+..||++|||++|++++
T Consensus 245 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 011223467888999999999999999999984
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-36 Score=318.75 Aligned_cols=253 Identities=24% Similarity=0.310 Sum_probs=193.9
Q ss_pred hcccccccceEEEEEEec-CC-cEEEEEEecCcccCHHHHHHHHHHhhcCCCCC------cccceEEEEecCccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVLE-MG-TIVAVKRLKDVTISEREFKDKIEGVGAVNHEN------LVPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~lv~ey 446 (663)
.+.||+|+||+||+|... ++ +.||||+++........+.+|+.+++.++|++ ++.+++++......++||||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 468999999999999953 44 78999999865555677888999999887665 88999999999999999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEE-------------------cC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILL-------------------TK 507 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill-------------------~~ 507 (663)
+ ++++.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.
T Consensus 104 ~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 177 (355)
T 2eu9_A 104 L-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177 (355)
T ss_dssp C-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred c-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecccccccccccccccccccC
Confidence 9 567777776432 235899999999999999999999998 9999999999999 66
Q ss_pred CCceEEeccccccccCCCC-CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHH
Q 006055 508 SYEARVSDFGLAHLVGPSS-TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSI 586 (663)
Q Consensus 508 ~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 586 (663)
++.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+...
T Consensus 178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~ 254 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMMEKI 254 (355)
T ss_dssp CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHH
T ss_pred CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHH
Confidence 7899999999998765443 3457888999999999999999999999999999999999997532211 11111111
Q ss_pred Hhhcccccc---------c------------chh---------hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 587 VKDEWTSEV---------F------------DLE---------LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 587 ~~~~~~~~~---------~------------d~~---------~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
... ..... + +.. ............++.+++.+|+..||++|||++|+++
T Consensus 255 ~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 255 LGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 100 00000 0 000 0000111234557889999999999999999999987
Q ss_pred H
Q 006055 637 R 637 (663)
Q Consensus 637 ~ 637 (663)
+
T Consensus 334 h 334 (355)
T 2eu9_A 334 H 334 (355)
T ss_dssp S
T ss_pred C
Confidence 4
No 237
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.9e-36 Score=315.96 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=190.9
Q ss_pred hcccccccceEEEEEEe--cCCcEEEEEEecCccc---CHHHHHHHHHHhhcC---CCCCcccceEEEE-----ecCccE
Q 006055 375 AEVLGKGTFGTAYKAVL--EMGTIVAVKRLKDVTI---SEREFKDKIEGVGAV---NHENLVPLRAYYY-----SMDEKL 441 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~~~~~~ 441 (663)
.+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+.+++.+ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 36899999999999996 4689999999864322 123466777776655 8999999999987 455689
Q ss_pred EEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 442 LVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 442 lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+||||+. |+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 9999998 69999997643 234899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC---CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhh-------cc
Q 006055 522 VGPS---STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKD-------EW 591 (663)
Q Consensus 522 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~ 591 (663)
.... ....++..|+|||++.+..++.++||||||+++|||++|+.||..... ...+..+... .+
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD------VDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCGGGS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHHcCCCCcccC
Confidence 6532 234567789999999998899999999999999999999999975321 2222222211 00
Q ss_pred cccccchh--hh------cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 592 TSEVFDLE--LL------RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 592 ~~~~~d~~--~~------~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......+. .. ...........+.+++.+|+..||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 00 000011234467788999999999999999999974
No 238
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.8e-36 Score=318.30 Aligned_cols=248 Identities=22% Similarity=0.281 Sum_probs=189.1
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHHHhhcCCCCCcccceEEEEec-----CccEEEEEc
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIEGVGAVNHENLVPLRAYYYSM-----DEKLLVYDY 446 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey 446 (663)
.+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|+++++.++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 36899999999999995 4699999999965422 245678999999999999999999988654 567999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 526 (663)
+. |+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 98 5999998753 4899999999999999999999998 9999999999999999999999999998764321
Q ss_pred --------------CCCCCccccCccccC-CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh---
Q 006055 527 --------------TPNRVAGYRAPEVTD-PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK--- 588 (663)
Q Consensus 527 --------------~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 588 (663)
...++..|+|||++. +..++.++|||||||++|||++|+.||..... ...+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~ 240 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY------RHQLLLIFGIIG 240 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHC
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc------HHHHHHHHHHhC
Confidence 123577799999865 46789999999999999999999999975321 111111110
Q ss_pred hcc----cccccchh-------hhc--ccC----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 589 DEW----TSEVFDLE-------LLR--YQN----VEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 589 ~~~----~~~~~d~~-------~~~--~~~----~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
... ........ +.. ... ......++.+++.+|+..||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 00000000 000 000 01234567889999999999999999999984
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.2e-37 Score=320.45 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=172.8
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc--CHHHHHHHHH-HhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI--SEREFKDKIE-GVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|.. .+|+.||||+++.... ....+..|+. +++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 36899999999999996 4799999999976432 2344555555 67788999999999999999999999999986
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCCC--
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSST-- 527 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 527 (663)
+|.+++..........+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 888777531111134589999999999999999999998 8 99999999999999999999999999987654322
Q ss_pred -CCCCccccCcccc----CCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhc
Q 006055 528 -PNRVAGYRAPEVT----DPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLR 602 (663)
Q Consensus 528 -~~~~~~y~aPE~~----~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 602 (663)
..++..|+|||++ .+..++.++||||||+++|||++|+.||....... ..+....... ... + .
T Consensus 184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~-~~~-----~-~ 251 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQVVKGD-PPQ-----L-S 251 (327)
T ss_dssp ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-CCC-----C-C
T ss_pred cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHHHhcCC-CCC-----C-C
Confidence 2467789999998 45668899999999999999999999997532110 0000000000 000 0 0
Q ss_pred ccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 603 YQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 603 ~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........++.+++.+||..||++|||+.|++++
T Consensus 252 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00011233468888999999999999999999874
No 240
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.4e-36 Score=312.26 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=188.8
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---HHHHHHHHHHhhcCC--CCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---EREFKDKIEGVGAVN--HENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||++...+++.||||.+...... ...+.+|++++.+++ |+||+++++++.+....++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 3689999999999999888999999998754332 367889999999997 5999999999999999999999 667
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++++ +.+||+|||+++......
T Consensus 112 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 112 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 89999997543 5899999999999999999999998 999999999999964 899999999998765432
Q ss_pred ---CCCCCccccCccccCC-----------CCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhccc
Q 006055 527 ---TPNRVAGYRAPEVTDP-----------CKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWT 592 (663)
Q Consensus 527 ---~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (663)
...++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ....+.........
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNHE 258 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTSC
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhcccc
Confidence 2246778999999875 4678899999999999999999999964321 12222222221111
Q ss_pred ccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 593 SEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 593 ~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
... ......++.+++.+|+..||++||+++|++++-
T Consensus 259 ~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 259 IEF----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCC----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCC----------cccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 000 011124678888999999999999999999864
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.1e-37 Score=318.96 Aligned_cols=232 Identities=22% Similarity=0.342 Sum_probs=189.6
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCccc-------CHHHHHHHHHHhhcCC--CCCcccceEEEEecCccEEEE
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVTI-------SEREFKDKIEGVGAVN--HENLVPLRAYYYSMDEKLLVY 444 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 444 (663)
.+.||+|+||.||+|. ..+|+.||||.++.... ....+.+|+.+++.++ |+||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 4689999999999998 45789999999875432 1245678899999986 599999999999999999999
Q ss_pred EccCC-CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEecccccccc
Q 006055 445 DYLTM-GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFGLAHLV 522 (663)
Q Consensus 445 ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg~a~~~ 522 (663)
||+.. ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ +++.+||+|||+++..
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 99976 8999998753 25899999999999999999999998 99999999999999 7889999999999876
Q ss_pred CCCC--CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchh
Q 006055 523 GPSS--TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLE 599 (663)
Q Consensus 523 ~~~~--~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 599 (663)
.... ...++..|+|||++.+..+ +.++||||||+++|||++|+.||.... ........ .
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~~---~--- 262 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQVF---F--- 262 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCCC---C---
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhccccc---c---
Confidence 5432 2357788999999876655 678899999999999999999996421 11111100 0
Q ss_pred hhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 600 LLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 600 ~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
......++.+++.+||..||++|||++|++++
T Consensus 263 ------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122367788999999999999999999884
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=325.65 Aligned_cols=239 Identities=21% Similarity=0.257 Sum_probs=179.6
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++||+|+||+||.....+|+.||||++..... ..+.+|+++++.+ +||||+++++++.+....++||||+. |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 368999999997765566799999999865422 2356789999998 89999999999999999999999997 5999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC-----CCceEEeccccccccCCC---
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK-----SYEARVSDFGLAHLVGPS--- 525 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~-----~~~~kl~Dfg~a~~~~~~--- 525 (663)
+++..... ...+..+..++.||+.||.|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 99976432 2344456789999999999999998 999999999999953 335889999999876533
Q ss_pred ----CCCCCCccccCccccC---CCCCCCcchhhhHHHHHHHHHh-CCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 526 ----STPNRVAGYRAPEVTD---PCKVSQKADVYSFGVLLLELLT-GKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 526 ----~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
....++.+|+|||++. ...++.++|||||||++|||++ |..||..... ...... .........
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~-~~~~~~~~~- 250 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANIL-LGACSLDCL- 250 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHH-TTCCCCTTS-
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHH-hccCCcccc-
Confidence 1234788899999997 4567789999999999999999 9999854211 111111 111111111
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
.........+.+++.+|++.||++|||++||++|
T Consensus 251 ------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 251 ------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 1112233457788999999999999999999953
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=310.42 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=174.1
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTMG 450 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g 450 (663)
.+.||+|+||.||+|... +|+.||||.+...... .+.+.++..+++.++||||+++++++.+.+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 468999999999999964 7999999999765322 233445555688889999999999999999999999999 44
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCcceecCCCCCCEEEcCCCceEEeccccccccCCCC---
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-GPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSS--- 526 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--- 526 (663)
.+..+..... ..+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 109 ~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (318)
T 2dyl_A 109 CAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182 (318)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc
Confidence 5555554321 3589999999999999999999985 7 9999999999999999999999999997664432
Q ss_pred CCCCCccccCccccC-----CCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhh
Q 006055 527 TPNRVAGYRAPEVTD-----PCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELL 601 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 601 (663)
...++..|+|||++. ...++.++||||||+++|||++|+.||.... ........+....... .
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~-~------ 250 (318)
T 2dyl_A 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----TDFEVLTKVLQEEPPL-L------ 250 (318)
T ss_dssp ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHHSCCCC-C------
T ss_pred ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----ccHHHHHHHhccCCCC-C------
Confidence 234677899999984 4567889999999999999999999996422 1222333333322110 0
Q ss_pred cccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 602 RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 602 ~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..||++||+++|++++
T Consensus 251 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 --PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0001123467788899999999999999999874
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=314.85 Aligned_cols=232 Identities=24% Similarity=0.334 Sum_probs=184.4
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCccc-------CHHHHHHHHHHhhcC----CCCCcccceEEEEecCccEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTI-------SEREFKDKIEGVGAV----NHENLVPLRAYYYSMDEKLL 442 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~~~~~l 442 (663)
.+.||+|+||.||+|.. .+++.||||++..... ....+.+|+.++.++ +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 46899999999999984 5789999999975432 123456788888887 89999999999999999999
Q ss_pred EEEc-cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEc-CCCceEEecccccc
Q 006055 443 VYDY-LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLT-KSYEARVSDFGLAH 520 (663)
Q Consensus 443 v~ey-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~-~~~~~kl~Dfg~a~ 520 (663)
|||| +.+++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++ .++.+||+|||+++
T Consensus 116 v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 9999 78999999997532 4899999999999999999999998 99999999999999 88999999999998
Q ss_pred ccCCCC--CCCCCccccCccccCCCCC-CCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccc
Q 006055 521 LVGPSS--TPNRVAGYRAPEVTDPCKV-SQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFD 597 (663)
Q Consensus 521 ~~~~~~--~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 597 (663)
...... ...++..|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~------ 250 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL------ 250 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC------
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc------
Confidence 765432 3346778999999876655 458999999999999999999996421 1111110
Q ss_pred hhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006055 598 LELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIKR 637 (663)
Q Consensus 598 ~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~ 637 (663)
........++.+++.+|+..||++|||++|++++
T Consensus 251 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 ------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011223467788999999999999999999984
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.8e-35 Score=301.12 Aligned_cols=228 Identities=12% Similarity=0.069 Sum_probs=177.6
Q ss_pred hcccccccceEEEEEEec-CCcEEEEEEecCcccC----HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEEccCC
Q 006055 375 AEVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVTIS----EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYDYLTM 449 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~ 449 (663)
.+.||+|+||.||+|... +|+.||||.+...... .+.+.+|+..+..++||||+++++++.+.+..++||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 368999999999999964 5899999999765332 26789999999999999999999999999999999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
++|.+++... .......+++.|++.||.|||+++ |+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecc------------
Confidence 9999999532 344567889999999999999998 9999999999999999999998554
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHH
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEE 609 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 609 (663)
|++| ++.++|||||||++|||++|+.||......+..... ..........+... ....
T Consensus 175 ----~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~~~~ 232 (286)
T 3uqc_A 175 ----TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIEPADI----DRDI 232 (286)
T ss_dssp ----CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCCHHHH----CTTS
T ss_pred ----ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCChhhc----ccCC
Confidence 3333 578999999999999999999999864432211000 00000000000000 0122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHhhCCCCC
Q 006055 610 MVQLLQLAIDCSAQYPDNRPSMSEVIKRIEELHPSST 646 (663)
Q Consensus 610 ~~~l~~l~~~C~~~dP~~RPt~~ev~~~L~~~~~~~~ 646 (663)
..++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 233 ~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 233 PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 3467888999999999999 99999999999866543
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-35 Score=337.72 Aligned_cols=232 Identities=19% Similarity=0.225 Sum_probs=188.1
Q ss_pred hcccccccceEEEEEEec--CCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEecCc-----cEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLE--MGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYSMDE-----KLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~lv~e 445 (663)
.++||+|+||.||+|... +|+.||||.+.... .....+.+|++++..++||||+++++++...+. .++|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 368999999999999964 68999999986542 224568899999999999999999999988766 699999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++++|.+++.. .+++..++.++.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++.....
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999987753 4899999999999999999999998 9999999999999986 8999999999988776
Q ss_pred CCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccC
Q 006055 526 STPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQN 605 (663)
Q Consensus 526 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 605 (663)
....+|.+|+|||++.+.. +.++|||||||++|||++|..||........ . ....
T Consensus 235 ~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------~---------~~~~ 289 (681)
T 2pzi_A 235 GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------P---------EDDP 289 (681)
T ss_dssp SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------------C---------TTCH
T ss_pred CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc---------------c---------cccc
Confidence 6667899999999987654 8899999999999999999988864321110 0 0000
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHhh
Q 006055 606 VEEEMVQLLQLAIDCSAQYPDNRPS-MSEVIKRIEEL 641 (663)
Q Consensus 606 ~~~~~~~l~~l~~~C~~~dP~~RPt-~~ev~~~L~~~ 641 (663)
.......+.+++.+|++.||++||+ ++++.+.|..+
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 1122346788999999999999995 66666666544
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.9e-35 Score=300.45 Aligned_cols=226 Identities=21% Similarity=0.271 Sum_probs=174.5
Q ss_pred cccccccceEEEEEEe-cCCcEEEEEEecCcccCHHHHHHHHHHh-hcCCCCCcccceEEEEe----cCccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVTISEREFKDKIEGV-GAVNHENLVPLRAYYYS----MDEKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~ 449 (663)
++||+|+||.||+|.. .+++.||||+++.. ..+.+|++++ +..+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 5799999999999995 57899999998653 4567888887 66699999999999877 6678999999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcC---CCceEEeccccccccCCCC
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTK---SYEARVSDFGLAHLVGPSS 526 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 526 (663)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||++.....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-- 172 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-- 172 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEecccccccccc--
Confidence 99999998643 245899999999999999999999998 999999999999998 78899999999875432
Q ss_pred CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHhhcccccccchhhhcccCh
Q 006055 527 TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNV 606 (663)
Q Consensus 527 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 606 (663)
..++.++|||||||++|||++|+.||.......... ............... ...
T Consensus 173 ----------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~---~~~ 226 (299)
T 3m2w_A 173 ----------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIRMGQYEFPN---PEW 226 (299)
T ss_dssp ----------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSCCSSCTTCCSSCH---HHH
T ss_pred ----------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHHHHHhhccccCCc---hhc
Confidence 345778999999999999999999996532211000 000000000000000 000
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006055 607 EEEMVQLLQLAIDCSAQYPDNRPSMSEVIKRI 638 (663)
Q Consensus 607 ~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~~L 638 (663)
.....++.+++.+|+..||++|||++|++++-
T Consensus 227 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 12345688899999999999999999999853
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-35 Score=331.28 Aligned_cols=261 Identities=20% Similarity=0.239 Sum_probs=195.9
Q ss_pred hcccccccceEEEEEEe-cCCcEEEEEEecCcc--cCHHHHHHHHHHhhcCCCCCcccceEEEEe------cCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTIVAVKRLKDVT--ISEREFKDKIEGVGAVNHENLVPLRAYYYS------MDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~e 445 (663)
.+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+++++.++||||+++++++.. ....++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 46899999999999995 569999999987542 224668899999999999999999998755 567799999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc---eEEecccccccc
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE---ARVSDFGLAHLV 522 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~---~kl~Dfg~a~~~ 522 (663)
|+++|+|.+++..... ...+++..+..++.+++.||.|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 99 y~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp CCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred eCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999999986432 235888999999999999999999998 999999999999997765 999999999877
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccccCCCCCChHHHHHHHHh--------hcc
Q 006055 523 GPSS---TPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSIVK--------DEW 591 (663)
Q Consensus 523 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~ 591 (663)
.... ...++..|+|||.+.+..++.++||||||+++|||++|+.||..... ...|...... ...
T Consensus 175 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 175 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp TSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSCCC
T ss_pred ccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhhhh
Confidence 5543 23467789999999999999999999999999999999999964211 0011000000 000
Q ss_pred ccccc--chhhh-cccChHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHhhCCC
Q 006055 592 TSEVF--DLELL-RYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSE-----VIKRIEELHPS 644 (663)
Q Consensus 592 ~~~~~--d~~~~-~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~e-----v~~~L~~~~~~ 644 (663)
....+ ..... ...........+.+++.+|+..||++|||++| ..+.++++...
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 00000 01112235567889999999999999999988 55666665443
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-35 Score=316.72 Aligned_cols=236 Identities=15% Similarity=0.164 Sum_probs=173.8
Q ss_pred hcccccccceEEEEEE-ecCCcEEEEEEecCcc----cCHHHHHHHHHHhhcCCC-CCcc---------cceEE------
Q 006055 375 AEVLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT----ISEREFKDKIEGVGAVNH-ENLV---------PLRAY------ 433 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~e~~~l~~l~h-~niv---------~l~~~------ 433 (663)
.++||+|+||+||+|. ..+|+.||||++.... ...+.+.+|+.+++.++| +|.. .....
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 3689999999999999 5679999999987432 124678999999999987 3211 11111
Q ss_pred ------EEe-----cCccEEEEEccCCCChhHhhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCC
Q 006055 434 ------YYS-----MDEKLLVYDYLTMGSLSALLHGNK--GAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKS 500 (663)
Q Consensus 434 ------~~~-----~~~~~lv~ey~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~ 500 (663)
+.. ....+++|+++ .++|.+++.... ......+++..++.++.||+.||+|||+++ |+||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHrDiKp 239 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRP 239 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCCCG
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCccc
Confidence 111 12346667754 579999884110 011235788999999999999999999998 99999999
Q ss_pred CCEEEcCCCceEEeccccccccCCCC-CCCCCccccCcccc----------CCCCCCCcchhhhHHHHHHHHHhCCCCCc
Q 006055 501 SNILLTKSYEARVSDFGLAHLVGPSS-TPNRVAGYRAPEVT----------DPCKVSQKADVYSFGVLLLELLTGKAPTH 569 (663)
Q Consensus 501 ~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~y~aPE~~----------~~~~~~~~~Dv~slGvvl~elltg~~p~~ 569 (663)
+|||++.++.+||+|||+++...... ...+ ..|+|||++ .+..++.++|||||||++|||++|+.||.
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 318 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred ceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 99999999999999999998765442 2345 889999999 66668889999999999999999999997
Q ss_pred cccCCCCCChHHHHHHHHhhcccccccchhhhcccChHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006055 570 ALLNEEGVDLPRWVQSIVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAIDCSAQYPDNRPSMSEVIK 636 (663)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C~~~dP~~RPt~~ev~~ 636 (663)
.....+... .+ +.... ..+.++.+++.+||..||++||++.|+++
T Consensus 319 ~~~~~~~~~---------------~~----~~~~~---~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 319 DDAALGGSE---------------WI----FRSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp TTGGGSCSG---------------GG----GSSCC---CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcchhhhHH---------------HH----Hhhcc---cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 543222110 00 00011 12246788888999999999999776654
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.2e-34 Score=303.75 Aligned_cols=235 Identities=13% Similarity=0.129 Sum_probs=179.8
Q ss_pred HhhcccccccceEEEEEEecCCcEEEEEEecCcc---------cCHHHHHHHHHHhhcCC---------CCCcccceEEE
Q 006055 373 ASAEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT---------ISEREFKDKIEGVGAVN---------HENLVPLRAYY 434 (663)
Q Consensus 373 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~---------~~~~~~~~e~~~l~~l~---------h~niv~l~~~~ 434 (663)
...+.||+|+||+||+|.. +|+.||||+++... ...+.+.+|+.+++.++ ||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3468999999999999998 68999999987542 12367888999888775 77777777764
Q ss_pred E------------------------------ecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006055 435 Y------------------------------SMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIE 484 (663)
Q Consensus 435 ~------------------------------~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~ 484 (663)
. +....++||||+++|++.+.+.. ..+++..++.++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 15778999999999977666643 24799999999999999999
Q ss_pred HHh-hcCCcceecCCCCCCEEEcCCC--------------------ceEEeccccccccCCCCCCCCCccccCccccCCC
Q 006055 485 YLH-AQGPNVSHGNIKSSNILLTKSY--------------------EARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPC 543 (663)
Q Consensus 485 ~LH-~~~~~iiHrdlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~ 543 (663)
||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...+|..|+|||++.+.
T Consensus 176 ~lH~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 176 VAEASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HHHHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCC
T ss_pred HHHHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCC
Confidence 999 888 99999999999999887 8999999999877543 34577889999999877
Q ss_pred CCCCcchhhhHHHH-HHHHHhCCCCCccccCCCCCChHHHHHH----HHhhcccccccchhhhcccChHHHHHHHHHHHH
Q 006055 544 KVSQKADVYSFGVL-LLELLTGKAPTHALLNEEGVDLPRWVQS----IVKDEWTSEVFDLELLRYQNVEEEMVQLLQLAI 618 (663)
Q Consensus 544 ~~~~~~Dv~slGvv-l~elltg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~ 618 (663)
. +.++||||++++ .+++++|..||... .|... ........... ..........++.+++.
T Consensus 253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~dli~ 317 (336)
T 2vuw_A 253 G-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKMLKQMTFKTKC-----NTPAMKQIKRKIQEFHR 317 (336)
T ss_dssp S-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHHHHTCCCSSCC-----CSHHHHHHHHHHHHHHH
T ss_pred C-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhhhhhhccCccc-----chhhhhhcCHHHHHHHH
Confidence 6 889999998777 77888899998531 12111 11110100000 01112345678899999
Q ss_pred HccCCCCCCCCCHHHHH-HH
Q 006055 619 DCSAQYPDNRPSMSEVI-KR 637 (663)
Q Consensus 619 ~C~~~dP~~RPt~~ev~-~~ 637 (663)
+|+..| |++|++ +|
T Consensus 318 ~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 318 TMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HGGGSS-----SHHHHHHHC
T ss_pred HHhccC-----CHHHHHhcC
Confidence 999876 999998 63
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=9.3e-29 Score=256.16 Aligned_cols=196 Identities=31% Similarity=0.537 Sum_probs=176.0
Q ss_pred CCChHHHHHHHHHHHhcCCC--CcCCcCCCCCCCc--cceeEecC----CcEEEEEcCCCCccc--ccCccccCCCCCCC
Q 006055 28 SDLSSDRAALLALRSSVGGR--TLLWNVYEASPCK--WAGVECEQ----NRVTMLRLPGVALSG--QIPLGILGNLTSLR 97 (663)
Q Consensus 28 ~~~~~d~~all~~~~~~~~~--~~~w~~~~~~~c~--w~gv~c~~----~~v~~L~L~~~~l~g--~~p~~~~~~l~~L~ 97 (663)
.|.+.|++||++||+++++. ..+|+. +.+||. |.||+|+. ++|+.|+|++|+++| .+|. .|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 57889999999999999743 236864 457998 99999975 799999999999999 8997 579999999
Q ss_pred EEEccC-CCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccc
Q 006055 98 TLSLRF-NSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENN 176 (663)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 176 (663)
+|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcCCCCCCCCC-CCCEEEeecCcCCCCCCcccccCC--CCCccCCcCCC
Q 006055 177 RLSGSIPGFDDVLP-NLQQLNVSNNLLNGSIPKRFQTFG--SNSFLGNSLCG 225 (663)
Q Consensus 177 ~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~~~--~~~~~~~~l~~ 225 (663)
+|++.+|..+..++ +|+.|+|++|++++.+|..|..+. .+.+.+|.+.+
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEG 211 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccC
Confidence 99999999999998 999999999999999999888765 22234555543
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.7e-29 Score=275.91 Aligned_cols=181 Identities=17% Similarity=0.032 Sum_probs=127.9
Q ss_pred ccccccceEEEEEE-ecCCcEEEEEEecCcc-----------cCHHHHHHHHHHhhcC-CCCCcccceEEEEecCccEEE
Q 006055 377 VLGKGTFGTAYKAV-LEMGTIVAVKRLKDVT-----------ISEREFKDKIEGVGAV-NHENLVPLRAYYYSMDEKLLV 443 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-----------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 443 (663)
..+.|+.|.+..+. .-.|+.||||.+.... ...++|.+|+++|+++ .|+||+++++++.+..+.|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777776655 4458999999986431 1235699999999999 799999999999999999999
Q ss_pred EEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccC
Q 006055 444 YDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 444 ~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
|||++|++|.+++.... +++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999998543 35543 58899999999999999 9999999999999999999999999998776
Q ss_pred CCCCC----CCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCC
Q 006055 524 PSSTP----NRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPT 568 (663)
Q Consensus 524 ~~~~~----~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~ 568 (663)
..... .+|++|||||++.+. +..++|+||+|++++++.++..++
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 54332 367789999999764 567899999999988887665543
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=8.5e-26 Score=262.42 Aligned_cols=181 Identities=27% Similarity=0.394 Sum_probs=113.8
Q ss_pred hcccCCChHHHHHHHHHHHhcCCC--CcCCcCCCCCCCccceeEecCCcEEEEEcCCCCcccc---cCc-----------
Q 006055 24 SFSFSDLSSDRAALLALRSSVGGR--TLLWNVYEASPCKWAGVECEQNRVTMLRLPGVALSGQ---IPL----------- 87 (663)
Q Consensus 24 ~~~~~~~~~d~~all~~~~~~~~~--~~~w~~~~~~~c~w~gv~c~~~~v~~L~L~~~~l~g~---~p~----------- 87 (663)
+.+.++.+.|++||++||+++.+. ..+|+ .+.+||.|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~-~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCC-TTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCC-CCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 334455678999999999999643 34797 3567999999999989999999999999987 654
Q ss_pred -----------cccCCCCCCCEEEccCCCCCCCCCc--cccCCCCCceEEcccccccCchhhhh-cCCcccccccccccc
Q 006055 88 -----------GILGNLTSLRTLSLRFNSLTSQLPS--DLASCSNLRNLYLQGNHFSGEVPLFL-VGLHHLVRLNLATNN 153 (663)
Q Consensus 88 -----------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~ 153 (663)
..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 2456677777777777777776666 67777777777777777666666544 555556666666555
Q ss_pred ccccCCCC---CcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 154 FSGEIPSG---FKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 154 l~~~~p~~---~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
+++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~ 217 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIP 217 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCC
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCc
Confidence 55444433 33333343333333333333221 333444444444444443333
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=4e-26 Score=264.46 Aligned_cols=193 Identities=24% Similarity=0.367 Sum_probs=166.1
Q ss_pred ChHHHHHHHHHHHhcCCCCcCCcCCC----CCC--Ccc------------ceeEec-CCcEEEEEcCCCCcccccCcccc
Q 006055 30 LSSDRAALLALRSSVGGRTLLWNVYE----ASP--CKW------------AGVECE-QNRVTMLRLPGVALSGQIPLGIL 90 (663)
Q Consensus 30 ~~~d~~all~~~~~~~~~~~~w~~~~----~~~--c~w------------~gv~c~-~~~v~~L~L~~~~l~g~~p~~~~ 90 (663)
...|++||++||+++++. +|+..+ .+| |.| .||+|+ .++|+.|+|++|+|+|.+|+ .|
T Consensus 267 ~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~-~l 343 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD-AI 343 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG-GG
T ss_pred chHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch-HH
Confidence 457999999999999765 787543 456 999 999998 48999999999999999997 57
Q ss_pred CCCCCCCEEEc-cCCCCCCC------------------------------------------------------------
Q 006055 91 GNLTSLRTLSL-RFNSLTSQ------------------------------------------------------------ 109 (663)
Q Consensus 91 ~~l~~L~~L~L-~~N~l~~~------------------------------------------------------------ 109 (663)
++|++|+.|+| ++|.++|.
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l 423 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCC
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccccc
Confidence 99999999999 77765444
Q ss_pred ----------------CCccccCCCCCceEEcccccccC-----------------chhhhhc--CCccccccccccccc
Q 006055 110 ----------------LPSDLASCSNLRNLYLQGNHFSG-----------------EVPLFLV--GLHHLVRLNLATNNF 154 (663)
Q Consensus 110 ----------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l 154 (663)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|++|++
T Consensus 424 ~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l 503 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503 (876)
T ss_dssp CCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTT
T ss_pred chhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCC
Confidence 78889999999999999999998 4899987 999999999999999
Q ss_pred cccCCCCCccccccccccccccc-ccC-cCCCCCCC-------CCCCCEEEeecCcCCCCCCc--ccccCCCCCc---cC
Q 006055 155 SGEIPSGFKNLTKLKTLFLENNR-LSG-SIPGFDDV-------LPNLQQLNVSNNLLNGSIPK--RFQTFGSNSF---LG 220 (663)
Q Consensus 155 ~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~-------l~~L~~L~l~~N~l~g~~p~--~~~~~~~~~~---~~ 220 (663)
.+.+|..|++|++|++|+|++|+ |+| .+|..++. +++|+.|+|++|+++ .+|. .|..++.+.. .+
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~ 582 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVH 582 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTT
T ss_pred CccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCC
Confidence 99999999999999999999998 998 78865544 459999999999999 8898 7877766654 55
Q ss_pred CcCCCC
Q 006055 221 NSLCGK 226 (663)
Q Consensus 221 ~~l~~~ 226 (663)
|.+...
T Consensus 583 N~l~~l 588 (876)
T 4ecn_A 583 NKVRHL 588 (876)
T ss_dssp SCCCBC
T ss_pred CCcccc
Confidence 555533
No 255
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=9e-26 Score=250.19 Aligned_cols=177 Identities=15% Similarity=0.168 Sum_probs=144.1
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCcccC---------HHHHHHHHHHhhcCCCCCcccceEEEEecCccEEEEE
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTIS---------EREFKDKIEGVGAVNHENLVPLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 445 (663)
.++||+|+||+||++.. .++.+|+|+....... .+.+.+|++++++++||||+++..++...++.++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 56899999999999954 4788999986443211 2457999999999999999988888888889999999
Q ss_pred ccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEeccccccccCCC
Q 006055 446 YLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPS 525 (663)
Q Consensus 446 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 525 (663)
|+++|+|.++++. +..++.|+++||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999974 4578999999999999998 999999999999999 9999999999987653
Q ss_pred C-----------CCCCCccccCccccCC--CCCCCcchhhhHHHHHHHHHhCCCCCc
Q 006055 526 S-----------TPNRVAGYRAPEVTDP--CKVSQKADVYSFGVLLLELLTGKAPTH 569 (663)
Q Consensus 526 ~-----------~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvvl~elltg~~p~~ 569 (663)
. ...+|+.|||||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2 2236778999999976 567788999999998888888777763
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=1e-25 Score=256.02 Aligned_cols=190 Identities=26% Similarity=0.387 Sum_probs=165.5
Q ss_pred hHHHHHHHHHHHhcCCCCc-----------CCcCCCCCCCcc---ceeEecC-CcEEEEEcCCCCcccccCccccCCCCC
Q 006055 31 SSDRAALLALRSSVGGRTL-----------LWNVYEASPCKW---AGVECEQ-NRVTMLRLPGVALSGQIPLGILGNLTS 95 (663)
Q Consensus 31 ~~d~~all~~~~~~~~~~~-----------~w~~~~~~~c~w---~gv~c~~-~~v~~L~L~~~~l~g~~p~~~~~~l~~ 95 (663)
..|++||.+|+.++++..+ +|+. +.+||.| .||+|+. ++|+.|+|++++++|.+|+ .+++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhcCcc
Confidence 4699999999999974322 4874 4679999 9999965 6999999999999999997 5799999
Q ss_pred CCEEEccCCC----------------------------------------------------------------------
Q 006055 96 LRTLSLRFNS---------------------------------------------------------------------- 105 (663)
Q Consensus 96 L~~L~L~~N~---------------------------------------------------------------------- 105 (663)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999883
Q ss_pred --------CCCCCCccccCCCCCceEEcccccccCc-----------------hhhhhc--CCccccccccccccccccC
Q 006055 106 --------LTSQLPSDLASCSNLRNLYLQGNHFSGE-----------------VPLFLV--GLHHLVRLNLATNNFSGEI 158 (663)
Q Consensus 106 --------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~ 158 (663)
|+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 446 888999999999999999999986 999998 9999999999999999999
Q ss_pred CCCCccccccccccccccc-ccC-cCCCCCCCC------CCCCEEEeecCcCCCCCCc--ccccCCCCCc---cCCcCC
Q 006055 159 PSGFKNLTKLKTLFLENNR-LSG-SIPGFDDVL------PNLQQLNVSNNLLNGSIPK--RFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 159 p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~g~~p~--~~~~~~~~~~---~~~~l~ 224 (663)
|..|+++++|++|+|++|+ ++| .+|..++.+ ++|+.|+|++|+++ .+|. .+..++.+.. .+|.+.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCc
Confidence 9999999999999999998 998 888877776 89999999999999 8888 7777766654 455554
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.89 E-value=6.3e-24 Score=221.24 Aligned_cols=193 Identities=20% Similarity=0.258 Sum_probs=165.9
Q ss_pred cCCChHHHHHHHHHHHhcCCC----CcCCc---CCCCCCCccceeEecC----------CcEEEEEcCCCCcccccCccc
Q 006055 27 FSDLSSDRAALLALRSSVGGR----TLLWN---VYEASPCKWAGVECEQ----------NRVTMLRLPGVALSGQIPLGI 89 (663)
Q Consensus 27 ~~~~~~d~~all~~~~~~~~~----~~~w~---~~~~~~c~w~gv~c~~----------~~v~~L~L~~~~l~g~~p~~~ 89 (663)
.++...|++||++||+++... ..+|. ....++|.|.|+.|.. .+|+.|+|++|+++ .+|..
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~- 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ- 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC-
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh-
Confidence 445678999999999988422 23573 3456789999999952 68999999999999 89985
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcc-----
Q 006055 90 LGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKN----- 164 (663)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~----- 164 (663)
++++++|++|+|++|.|+ .+|..|+++++|++|+|++|+++ .+|..+.++++|+.|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 577999999999999999 69999999999999999999999 88999999999999999999999999998765
Q ss_pred ----cccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 165 ----LTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 165 ----l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++ +|..+..++.+.. .+|.+.+
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~ 243 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALR 243 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchh
Confidence 999999999999999 889899999999999999999995 6767777766654 4444433
No 258
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=6.8e-22 Score=197.73 Aligned_cols=148 Identities=28% Similarity=0.296 Sum_probs=104.3
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.++.|+|++|++++ +++..|+++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 36 ~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLAT-LSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCc-cCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46677777777774 33345677777777777777777766666777777777777777777666666777777777777
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..++.+..
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 183 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT 183 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 777777555555677777777777777777666666777777777777777777666666665555443
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=9.8e-23 Score=236.67 Aligned_cols=164 Identities=35% Similarity=0.573 Sum_probs=133.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccc----------------------------------
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDL---------------------------------- 114 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~---------------------------------- 114 (663)
.+++.|+|++|.++|.+|. .++++++|+.|+|++|.++|.+|..+
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 4577777777777777775 45777778888887777776666433
Q ss_pred ------------------------------------cCCCCCceEEcccccccCchhhhhcCCccccccccccccccccC
Q 006055 115 ------------------------------------ASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEI 158 (663)
Q Consensus 115 ------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 158 (663)
.++++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 33567888888888888888988999999999999999999999
Q ss_pred CCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc--cccCCCCCccCC-cCCCCCCCCCCC
Q 006055 159 PSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR--FQTFGSNSFLGN-SLCGKPLQDCGT 233 (663)
Q Consensus 159 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~~~~~~~~~-~l~~~p~~~c~~ 233 (663)
|..|+++++|+.|||++|+|+|.+|..+..+++|++|+|++|+|+|.+|.. |.+++..+|.+| .+||.|+..|..
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999864 677888888666 599998877753
No 260
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.5e-22 Score=204.17 Aligned_cols=138 Identities=14% Similarity=0.194 Sum_probs=114.3
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCccc-------------------CHHHHHHHHHHhhcCCCCCcccceEEEEe
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI-------------------SEREFKDKIEGVGAVNHENLVPLRAYYYS 436 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 436 (663)
+.||+|+||.||+|...+|+.||||.++.... ....+.+|+.+++.++ | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~- 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA- 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE-
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe-
Confidence 78999999999999997899999999864321 2356889999999999 5 77777654
Q ss_pred cCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecc
Q 006055 437 MDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDF 516 (663)
Q Consensus 437 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Df 516 (663)
.+..++||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++.+||+||
T Consensus 172 ~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 172 WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEECCC
T ss_pred ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEEEC
Confidence 456799999999999998 531 123469999999999999998 99999999999999 999999999
Q ss_pred ccccccCCCCCCCCCccccCccccC
Q 006055 517 GLAHLVGPSSTPNRVAGYRAPEVTD 541 (663)
Q Consensus 517 g~a~~~~~~~~~~~~~~y~aPE~~~ 541 (663)
|+++... .|+|||++.
T Consensus 237 G~a~~~~---------~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVEVG---------EEGWREILE 252 (282)
T ss_dssp TTCEETT---------STTHHHHHH
T ss_pred CCCeECC---------CCCHHHHHH
Confidence 9997543 367888874
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=3.2e-21 Score=190.01 Aligned_cols=150 Identities=25% Similarity=0.338 Sum_probs=94.0
Q ss_pred CCCCCccceeEecCC-----------cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceE
Q 006055 55 EASPCKWAGVECEQN-----------RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNL 123 (663)
Q Consensus 55 ~~~~c~w~gv~c~~~-----------~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (663)
....|.|.+|.|... +++.|+|++|++++..| ..|.++++|+.|+|++|+|++..+..|.++++|++|
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 455799999999642 45566666666664333 345666666666666666655444555666666666
Q ss_pred EcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 124 YLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 124 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..|..+++|+.|+|++|+++
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 66666666555555566666666666666666 55666666666666666666666555555666666666666666666
Q ss_pred CCC
Q 006055 204 GSI 206 (663)
Q Consensus 204 g~~ 206 (663)
+..
T Consensus 173 c~c 175 (229)
T 3e6j_A 173 CEC 175 (229)
T ss_dssp TTB
T ss_pred CCc
Confidence 543
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.85 E-value=7.7e-21 Score=192.26 Aligned_cols=146 Identities=28% Similarity=0.295 Sum_probs=93.5
Q ss_pred EEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccc
Q 006055 71 VTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 71 v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (663)
++.|+|++|+++ .+|...|.++++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 39 l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 39 TKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp CSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 556666666665 4444456666777777777776665444455666677777777777665555566666677777777
Q ss_pred cccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC
Q 006055 151 TNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS 217 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~ 217 (663)
+|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|..|..++.+.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 184 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcC
Confidence 7777665555666667777777777777655555566667777777777777655555555444443
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=2.3e-21 Score=189.70 Aligned_cols=149 Identities=24% Similarity=0.342 Sum_probs=119.6
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG 127 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (663)
|.|..+.|+. ..++.|+|++|++++..|.+.|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 6788888853 24667888888888655666678888888888888888887777788888888888888
Q ss_pred ccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 128 NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888887778888888888888888888887778888888888888888888876654
No 264
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=7.6e-21 Score=184.36 Aligned_cols=149 Identities=30% Similarity=0.343 Sum_probs=132.0
Q ss_pred CCccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcc
Q 006055 58 PCKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQ 126 (663)
Q Consensus 58 ~c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (663)
.|.|.+|.|.. .+++.|+|++|+++ .+|...|+++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 37899999964 26889999999998 6776778999999999999999998767778999999999999
Q ss_pred cccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 127 GNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
+|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++.+..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 99999777777899999999999999999777777899999999999999999777777899999999999999998766
Q ss_pred C
Q 006055 207 P 207 (663)
Q Consensus 207 p 207 (663)
|
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 5
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=8.3e-21 Score=185.76 Aligned_cols=144 Identities=25% Similarity=0.334 Sum_probs=81.3
Q ss_pred CccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhh
Q 006055 59 CKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFL 138 (663)
Q Consensus 59 c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 138 (663)
|.|..|.|. +++++ .+|..+ .++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..|
T Consensus 11 C~~~~v~c~----------~~~l~-~iP~~l---~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 76 (220)
T 2v9t_B 11 CSNNIVDCR----------GKGLT-EIPTNL---PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAF 76 (220)
T ss_dssp EETTEEECT----------TSCCS-SCCSSC---CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTT
T ss_pred ECCCEEEcC----------CCCcC-cCCCcc---CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHh
Confidence 566666664 34444 455422 1455666666666655544555566666666666666665555556
Q ss_pred cCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 139 VGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 139 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..++.+
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 666666666666666654333345556666666666666665555555566666666666666665555445544443
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.83 E-value=2.2e-21 Score=200.65 Aligned_cols=143 Identities=22% Similarity=0.381 Sum_probs=91.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCC-CCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCS-NLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.+++.+|. .|+.+++|++|+|++|.|++.+|..+.+++ +|++|+|++|++++.+|..+..++ |+.|
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 4677788888888777775 467778888888888888777777777776 777777777777766666666655 6666
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
+|++|++++.+|..|.++++|++|+|++|++++.+|. +..+++|++|+|++|+++|.+|..|..++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 268 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCT
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCc
Confidence 6666666655555555555555555555555544443 34445555555555555544554444433
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.80 E-value=2.5e-19 Score=181.09 Aligned_cols=158 Identities=28% Similarity=0.338 Sum_probs=139.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|.++|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 57999999999998 78888889999999999999999997778889999999999999999988888899999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcCCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSLCGKPL 228 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l~~~p~ 228 (663)
|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..++.+... .+.++|+
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L--~l~~N~~ 217 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKML--QLQENPW 217 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE--ECCSSCB
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEE--EecCCCe
Confidence 99999997666779999999999999999998877889999999999999999997766677777666542 3444554
Q ss_pred C
Q 006055 229 Q 229 (663)
Q Consensus 229 ~ 229 (663)
.
T Consensus 218 ~ 218 (270)
T 2o6q_A 218 D 218 (270)
T ss_dssp C
T ss_pred e
Confidence 3
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.2e-19 Score=175.53 Aligned_cols=136 Identities=24% Similarity=0.330 Sum_probs=127.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|+++ .+|+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 110 (220)
T 2v9t_B 32 ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLL 110 (220)
T ss_dssp TTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEE
Confidence 57999999999999 66766889999999999999999998899999999999999999999977777789999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+++..
T Consensus 111 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 111 LNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999988899999999999999999999988888899999999999999999753
No 269
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=2.7e-20 Score=196.44 Aligned_cols=170 Identities=25% Similarity=0.305 Sum_probs=138.9
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccC-CCCCCCEEEccCCCCCCCCCccccCCCCCceEEcc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILG-NLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQ 126 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (663)
|.|.-+.|.. ..++.|+|++|+|+ .++...|. ++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 6788888953 25789999999999 56666777 99999999999999999888889999999999999
Q ss_pred cccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCC---CCCCCCCEEEeecCcCC
Q 006055 127 GNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFD---DVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~ 203 (663)
+|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998778889999999999999999998888999999999999999999996555555 57999999999999999
Q ss_pred CCCCcccccCCCCCccCCcCCCCCCC
Q 006055 204 GSIPKRFQTFGSNSFLGNSLCGKPLQ 229 (663)
Q Consensus 204 g~~p~~~~~~~~~~~~~~~l~~~p~~ 229 (663)
+..+..|..++.+......+.++|+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 65556666665432222234455554
No 270
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.7e-19 Score=175.01 Aligned_cols=153 Identities=24% Similarity=0.259 Sum_probs=134.6
Q ss_pred CCccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCceEEcccccccCchhh
Q 006055 58 PCKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP-SDLASCSNLRNLYLQGNHFSGEVPL 136 (663)
Q Consensus 58 ~c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~ 136 (663)
.|- .+-.|.. +.+++++|+++ .+|..+ ...++.|+|++|+|++..| ..|.++++|+.|+|++|+|++..|.
T Consensus 4 ~CP-~~C~C~~---~~l~~s~n~l~-~iP~~~---~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~ 75 (220)
T 2v70_A 4 ACP-EKCRCEG---TTVDCSNQKLN-KIPEHI---PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEG 75 (220)
T ss_dssp CCC-TTCEEET---TEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTT
T ss_pred CCC-CCCEECC---CEeEeCCCCcc-cCccCC---CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHH
Confidence 353 3456754 37999999998 789743 3567999999999998755 4589999999999999999988888
Q ss_pred hhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 137 FLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
.|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..++.+
T Consensus 76 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 155 (220)
T 2v70_A 76 AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 155 (220)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTC
T ss_pred HhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCC
Confidence 99999999999999999998888889999999999999999999999999999999999999999999989998887776
Q ss_pred Cc
Q 006055 217 SF 218 (663)
Q Consensus 217 ~~ 218 (663)
..
T Consensus 156 ~~ 157 (220)
T 2v70_A 156 ST 157 (220)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.79 E-value=4.9e-19 Score=179.14 Aligned_cols=148 Identities=30% Similarity=0.292 Sum_probs=131.5
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|.+++ ++ .++.+++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|..+++|+.|
T Consensus 62 l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp CTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 3679999999999985 54 47899999999999999998877788999999999999999998888889999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|..|..++.+..
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY 209 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCE
Confidence 99999999777777899999999999999999888888899999999999999999888877777766654
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1e-18 Score=172.05 Aligned_cols=159 Identities=27% Similarity=0.346 Sum_probs=136.8
Q ss_pred cceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcC
Q 006055 61 WAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVG 140 (663)
Q Consensus 61 w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 140 (663)
|..-.|+. +.++.++++++ .+|.++ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..
T Consensus 14 ~~~~~Cs~---~~v~c~~~~l~-~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 86 (229)
T 3e6j_A 14 PSQCSCSG---TTVDCRSKRHA-SVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS 86 (229)
T ss_dssp CTTCEEET---TEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCEEeC---CEeEccCCCcC-ccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhccc
Confidence 55667864 45889999998 899744 499999999999999988999999999999999999999777778899
Q ss_pred CccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccC
Q 006055 141 LHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLG 220 (663)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~ 220 (663)
+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..++.+...
T Consensus 87 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L- 164 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA- 164 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE-
T ss_pred CCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE-
Confidence 999999999999999777777899999999999999999 889889999999999999999997777778777766542
Q ss_pred CcCCCCCCC
Q 006055 221 NSLCGKPLQ 229 (663)
Q Consensus 221 ~~l~~~p~~ 229 (663)
.+.++|+.
T Consensus 165 -~l~~N~~~ 172 (229)
T 3e6j_A 165 -YLFGNPWD 172 (229)
T ss_dssp -ECTTSCBC
T ss_pred -EeeCCCcc
Confidence 23444443
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.78 E-value=2.3e-19 Score=186.68 Aligned_cols=153 Identities=22% Similarity=0.255 Sum_probs=135.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccC---------CCCCceEEcccccccCchhhhhc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLAS---------CSNLRNLYLQGNHFSGEVPLFLV 139 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~ 139 (663)
.+++.|+|++|.++ .+|. .++++++|++|+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 57999999999999 8887 4799999999999999998989988765 999999999999999 8888999
Q ss_pred CCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc-
Q 006055 140 GLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF- 218 (663)
Q Consensus 140 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~- 218 (663)
++++|+.|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..++.+..
T Consensus 204 ~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 282 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282 (328)
T ss_dssp GCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE
T ss_pred CCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE
Confidence 9999999999999999 47778999999999999999999999999999999999999999999999988888777654
Q ss_pred --cCCcCCC
Q 006055 219 --LGNSLCG 225 (663)
Q Consensus 219 --~~~~l~~ 225 (663)
.+|.+.+
T Consensus 283 ~L~~n~~~~ 291 (328)
T 4fcg_A 283 DLRGCVNLS 291 (328)
T ss_dssp ECTTCTTCC
T ss_pred eCCCCCchh
Confidence 4444444
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=4.9e-19 Score=169.27 Aligned_cols=132 Identities=29% Similarity=0.330 Sum_probs=120.2
Q ss_pred EEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCc-cccCCCCCceEEcccccccCchhhhhcCCccccccccc
Q 006055 72 TMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPS-DLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 72 ~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (663)
+.|++++|+++ .+|..+. .+|+.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 35667778886 8997543 4999999999999986664 48999999999999999999999999999999999999
Q ss_pred cccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 151 TNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
+|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|++|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999998888889999999999999999999999999999999999999999998776
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.78 E-value=6.3e-19 Score=179.59 Aligned_cols=156 Identities=22% Similarity=0.233 Sum_probs=130.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccc-ccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNH-FSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|+++ .+|.+.|.++++|++|+|++|.|++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 36889999999998 5665678899999999999999998878889999999999999997 776668888999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~ 224 (663)
+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|..++.+.. .+|.+.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999877888899999999999999998777777888999999999999998766666766655543 455554
Q ss_pred C
Q 006055 225 G 225 (663)
Q Consensus 225 ~ 225 (663)
+
T Consensus 191 ~ 191 (285)
T 1ozn_A 191 H 191 (285)
T ss_dssp E
T ss_pred c
Confidence 4
No 276
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.77 E-value=4.2e-19 Score=186.82 Aligned_cols=160 Identities=24% Similarity=0.274 Sum_probs=141.1
Q ss_pred CCCCccceeEecC-------------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCce
Q 006055 56 ASPCKWAGVECEQ-------------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRN 122 (663)
Q Consensus 56 ~~~c~w~gv~c~~-------------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 122 (663)
..+|.|.|+ |+. .+++.|+|++|+++ .+|...|.++++|+.|+|++|+|++..|..|.++++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 347899988 742 37999999999999 577667899999999999999999988889999999999
Q ss_pred EEcccccccCchhhhhcCCccccccccccccccccCCC--CCcccccccccccccc-cccCcCCCCCCCCCCCCEEEeec
Q 006055 123 LYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPS--GFKNLTKLKTLFLENN-RLSGSIPGFDDVLPNLQQLNVSN 199 (663)
Q Consensus 123 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~ 199 (663)
|+|++|++++..+..|.++++|++|+|++|++++ +|. .|.++++|++|+|++| .+++..|..+..+++|+.|++++
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 9999999997777779999999999999999994 554 7999999999999999 47767778899999999999999
Q ss_pred CcCCCCCCcccccCCCCCc
Q 006055 200 NLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 200 N~l~g~~p~~~~~~~~~~~ 218 (663)
|++++..|..|..++.+..
T Consensus 184 n~l~~~~~~~l~~l~~L~~ 202 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSH 202 (353)
T ss_dssp TTCCEECTTTTTTCSEEEE
T ss_pred CCcCccCHHHHhccccCCe
Confidence 9999988988887766544
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.77 E-value=3.1e-19 Score=202.53 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=135.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|+|+ .+|+..|.++++|++|+|++|+|+++.|..|.+|++|++|+|++|+|++..|..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 36899999999999 77777899999999999999999998888999999999999999999988888999999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccC-cCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS 217 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~ 217 (663)
|++|+|++..+..|+++++|++|+|++|+|++ .+|..+..+++|++|+|++|+|++..|..|..+..+.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~ 200 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 200 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhh
Confidence 99999997777789999999999999999986 4688899999999999999999998888887665544
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.77 E-value=4.7e-19 Score=182.47 Aligned_cols=156 Identities=24% Similarity=0.330 Sum_probs=105.8
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCC--CCccccCCCCCceEEc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQ--LPSDLASCSNLRNLYL 125 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L 125 (663)
|.|.+|.|+. .+++.|+|++|+++ .+|.++|+++++|+.|+|++|.|+.. .|..+..+++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 7999999964 36899999999998 88888889999999999999999742 2455556667777777
Q ss_pred ccccccCchhhhhcCCccccccccccccccccCC-CCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCC
Q 006055 126 QGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIP-SGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
++|.++ .+|..+..+++|+.|+|++|++++..+ ..+.++++|++|+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 777666 355556666666666666666654333 355566666666666666655555555556666666666666554
Q ss_pred -CCCcccccCCCC
Q 006055 205 -SIPKRFQTFGSN 216 (663)
Q Consensus 205 -~~p~~~~~~~~~ 216 (663)
.+|..+..++.+
T Consensus 165 ~~~~~~~~~l~~L 177 (306)
T 2z66_A 165 NFLPDIFTELRNL 177 (306)
T ss_dssp GEECSCCTTCTTC
T ss_pred ccchhHHhhCcCC
Confidence 345544444433
No 279
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.77 E-value=3.8e-19 Score=180.34 Aligned_cols=146 Identities=21% Similarity=0.204 Sum_probs=132.1
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.++.|+|++|+++ .++...|.++++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|+.|++
T Consensus 29 ~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 6999999999999 556557899999999999999999987889999999999999999999888899999999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccCc-CCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGS-IPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
++|++++..+..+.++++|++|+|++|++++. +|..+..+++|+.|+|++|++++..+..|..+..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 175 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhc
Confidence 99999987777899999999999999999873 68999999999999999999998777777655443
No 280
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.77 E-value=1.4e-18 Score=177.03 Aligned_cols=158 Identities=26% Similarity=0.299 Sum_probs=137.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCC-CCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNS-LTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.+++..| ..|.++++|++|+|++|. ++...|..|.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDA-AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCH-hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 579999999999985445 468999999999999997 888778899999999999999999998889999999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~ 224 (663)
+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|..|..++.+.. .+|.+.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 99999999777777999999999999999999777778999999999999999999888988887766554 556555
Q ss_pred CCC
Q 006055 225 GKP 227 (663)
Q Consensus 225 ~~p 227 (663)
+.+
T Consensus 215 ~~~ 217 (285)
T 1ozn_A 215 ALP 217 (285)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.76 E-value=3.4e-18 Score=170.79 Aligned_cols=167 Identities=23% Similarity=0.286 Sum_probs=146.1
Q ss_pred CCCccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhh
Q 006055 57 SPCKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPL 136 (663)
Q Consensus 57 ~~c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 136 (663)
+||.|.|.+|.. ..+.+++++++++ .+|.++ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|.
T Consensus 3 ~Cp~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE-GKKEVDCQGKSLD-SVPSGI---PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG-GGTEEECTTCCCS-SCCSCC---CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC-CCeEEecCCCCcc-ccCCCC---CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 478999999953 3557999999999 899754 37999999999999998888999999999999999999998898
Q ss_pred hhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 137 FLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
.|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..++.+
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 99999999999999999998778889999999999999999998877888999999999999999997777778776665
Q ss_pred Cc---cCCcCCCCCC
Q 006055 217 SF---LGNSLCGKPL 228 (663)
Q Consensus 217 ~~---~~~~l~~~p~ 228 (663)
.. .+|.+.+.+.
T Consensus 158 ~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 158 QTLSLSTNQLQSVPH 172 (251)
T ss_dssp CEEECCSSCCSCCCT
T ss_pred CEEECCCCcCCccCH
Confidence 54 5666665543
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=1.8e-18 Score=175.06 Aligned_cols=138 Identities=30% Similarity=0.345 Sum_probs=128.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|+..|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 58999999999999 56666789999999999999999998888899999999999999999988888899999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|++|++++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999998878788999999999999999999888889999999999999999998876
No 283
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.76 E-value=6.2e-19 Score=196.85 Aligned_cols=158 Identities=24% Similarity=0.251 Sum_probs=140.8
Q ss_pred CCccceeEecC-------------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEE
Q 006055 58 PCKWAGVECEQ-------------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLY 124 (663)
Q Consensus 58 ~c~w~gv~c~~-------------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (663)
.|.|.|+ |+. .+++.|+|++|++++..| ..|+++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5999999 863 279999999999995555 4689999999999999999998889999999999999
Q ss_pred cccccccCchhhhhcCCccccccccccccccc-cCCCCCcccccccccccccccccCcCC-CCCCCCCCCCEEEeecCcC
Q 006055 125 LQGNHFSGEVPLFLVGLHHLVRLNLATNNFSG-EIPSGFKNLTKLKTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLL 202 (663)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l 202 (663)
|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++.+.+| ..+..+++|++|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999999888889999999999999999986 467889999999999999999655655 6899999999999999999
Q ss_pred CCCCCcccccCCCCC
Q 006055 203 NGSIPKRFQTFGSNS 217 (663)
Q Consensus 203 ~g~~p~~~~~~~~~~ 217 (663)
++.+|..+..++.+.
T Consensus 161 ~~~~~~~l~~l~~L~ 175 (549)
T 2z81_A 161 RNYQSQSLKSIRDIH 175 (549)
T ss_dssp CEECTTTTTTCSEEE
T ss_pred cccChhhhhccccCc
Confidence 999998887665443
No 284
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.6e-18 Score=173.85 Aligned_cols=133 Identities=16% Similarity=0.126 Sum_probs=103.9
Q ss_pred hcccccccceEEEEEEe-cCCcE--EEEEEecCcccC-------------------------HHHHHHHHHHhhcCCCCC
Q 006055 375 AEVLGKGTFGTAYKAVL-EMGTI--VAVKRLKDVTIS-------------------------EREFKDKIEGVGAVNHEN 426 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~h~n 426 (663)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+..+..+.|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 36799999999999997 78999 999987543111 135788999999998886
Q ss_pred cc--cceEEEEecCccEEEEEccCC-C----ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCcceecCC
Q 006055 427 LV--PLRAYYYSMDEKLLVYDYLTM-G----SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLH-AQGPNVSHGNI 498 (663)
Q Consensus 427 iv--~l~~~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH-~~~~~iiHrdl 498 (663)
+. .++.+ ...++||||+.+ | +|.++... .++.....++.|++.||.||| +.+ |+||||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl 197 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE--LVHADL 197 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence 53 33332 467999999942 4 67666532 123456789999999999999 888 999999
Q ss_pred CCCCEEEcCCCceEEeccccccccC
Q 006055 499 KSSNILLTKSYEARVSDFGLAHLVG 523 (663)
Q Consensus 499 k~~Nill~~~~~~kl~Dfg~a~~~~ 523 (663)
||+|||+++ .++|+|||+|....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999997653
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=2.3e-18 Score=175.74 Aligned_cols=155 Identities=26% Similarity=0.305 Sum_probs=126.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|.+++ +++..|.++++|+.|+|++|.|++. |. ...+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 31 ~~l~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCc-cCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 468899999999984 4445789999999999999999874 33 378899999999999998 6788888899999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l~~ 225 (663)
|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..++.+. +.+|.+..
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 186 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT 186 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc
Confidence 999999977777899999999999999999977777888899999999999999866555566555544 45666665
Q ss_pred CC
Q 006055 226 KP 227 (663)
Q Consensus 226 ~p 227 (663)
.|
T Consensus 187 ip 188 (290)
T 1p9a_G 187 IP 188 (290)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 286
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.75 E-value=1.8e-18 Score=162.93 Aligned_cols=135 Identities=27% Similarity=0.333 Sum_probs=118.9
Q ss_pred CccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhh
Q 006055 59 CKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFL 138 (663)
Q Consensus 59 c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 138 (663)
|.|.++.|+. ++++ .+|.. ..++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|
T Consensus 7 C~~~~l~~~~----------~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRCNS----------KGLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEECCS----------SCCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEecC----------CCCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 6788777754 4555 67753 34799999999999998777788999999999999999998777888
Q ss_pred cCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 139 VGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 139 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 73 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 73 DKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999999999999997777778999999999999999997777778999999999999999998776
No 287
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.75 E-value=2.8e-18 Score=175.16 Aligned_cols=141 Identities=32% Similarity=0.322 Sum_probs=83.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|. .+.+++|+.|+|++|+|+. +|..+.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 55 ~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCC-EEEC--CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-cccC--CCCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 45666666666665 3333 2556666666666666653 555566666666666666666655555566666666666
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~ 195 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH 195 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccc
Confidence 6666666554555566666666666666666444445556666666666666666 4555444433
No 288
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.75 E-value=8.5e-19 Score=198.24 Aligned_cols=159 Identities=21% Similarity=0.245 Sum_probs=141.3
Q ss_pred CCCccc----eeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCc
Q 006055 57 SPCKWA----GVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLR 121 (663)
Q Consensus 57 ~~c~w~----gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (663)
+||.|. .|.|.. .+++.|+|++|++++ +++..|.++++|++|+|++|.|++..|..|.++++|+
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 467653 577743 479999999999994 5555789999999999999999998899999999999
Q ss_pred eEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccC-cCCCCCCCCCCCCEEEeecC
Q 006055 122 NLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNN 200 (663)
Q Consensus 122 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N 200 (663)
+|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+|++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999998889999999999999999999998777889999999999999999986 67999999999999999999
Q ss_pred cCCCCCCcccccCCCC
Q 006055 201 LLNGSIPKRFQTFGSN 216 (663)
Q Consensus 201 ~l~g~~p~~~~~~~~~ 216 (663)
++++..|..|..+..+
T Consensus 164 ~l~~~~~~~~~~l~~L 179 (606)
T 3vq2_A 164 YIQTITVNDLQFLREN 179 (606)
T ss_dssp CCCEECTTTTHHHHHC
T ss_pred cceecChhhhhhhhcc
Confidence 9999888877766543
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.75 E-value=1.2e-18 Score=189.80 Aligned_cols=158 Identities=23% Similarity=0.268 Sum_probs=138.5
Q ss_pred CCCccce--eEecC----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCC-CccccCCCCCceE
Q 006055 57 SPCKWAG--VECEQ----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQL-PSDLASCSNLRNL 123 (663)
Q Consensus 57 ~~c~w~g--v~c~~----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 123 (663)
+.|.|.+ |.|.. .+++.|+|++|.+++..| ..|+++++|++|+|++|.+.+.+ |..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 3566665 88864 368999999999996555 46899999999999999998666 5679999999999
Q ss_pred EcccccccCchhhhhcCCccccccccccccccccCCCC--CcccccccccccccccccCcCCCC-CCCCCCCCEEEeecC
Q 006055 124 YLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSG--FKNLTKLKTLFLENNRLSGSIPGF-DDVLPNLQQLNVSNN 200 (663)
Q Consensus 124 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N 200 (663)
+|++|++++..|..|.++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. +..+++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999866554 999999999999999999888876 899999999999999
Q ss_pred cCCCCCCcccccCCC
Q 006055 201 LLNGSIPKRFQTFGS 215 (663)
Q Consensus 201 ~l~g~~p~~~~~~~~ 215 (663)
++++..|..+..+..
T Consensus 165 ~l~~~~~~~l~~l~~ 179 (455)
T 3v47_A 165 KVKSICEEDLLNFQG 179 (455)
T ss_dssp CBSCCCTTTSGGGTT
T ss_pred cccccChhhhhcccc
Confidence 999999988877643
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.74 E-value=1.5e-17 Score=160.93 Aligned_cols=148 Identities=28% Similarity=0.322 Sum_probs=128.8
Q ss_pred eEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcc
Q 006055 64 VECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHH 143 (663)
Q Consensus 64 v~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (663)
-.|.. +.++.++++++ .+|.+ ..++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++
T Consensus 5 C~C~~---~~v~c~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 77 (208)
T 2o6s_A 5 CSCSG---TTVECYSQGRT-SVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77 (208)
T ss_dssp CEEET---TEEECCSSCCS-SCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred CEECC---CEEEecCCCcc-CCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCC
Confidence 45643 46788999998 78864 3579999999999999877778899999999999999999877778899999
Q ss_pred ccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 144 LVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 144 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..+..|..++.+..
T Consensus 78 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 152 (208)
T 2o6s_A 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY 152 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccE
Confidence 999999999999776777899999999999999999887888999999999999999999777766776666554
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.74 E-value=2.1e-18 Score=194.57 Aligned_cols=155 Identities=20% Similarity=0.187 Sum_probs=138.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
+++.|++++|.+. .+|+.+|+++++|+.|+|++|.|++..|..|.++++|++|+|++|.+++..|..|+++++|+.|+|
T Consensus 52 ~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 5688999999997 788888999999999999999999988889999999999999999999989999999999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcCCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSLCG 225 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l~~ 225 (663)
++|+|++..+..|+++++|++|+|++|.|++..|..|..+++|+.|+|++|++++..+..+..+..+.+.+|.+.+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccc
Confidence 9999996655667999999999999999999999999999999999999999998765666666666556665544
No 292
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=6.9e-19 Score=168.21 Aligned_cols=153 Identities=25% Similarity=0.361 Sum_probs=126.0
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG 127 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (663)
|.|..+.|.. ..++.|+|++|++++..+.+.|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 7899999964 27899999999999555545689999999999999999998899999999999999999
Q ss_pred ccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCC-CCCCEEEeecCcCCCCC
Q 006055 128 NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVL-PNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~g~~ 206 (663)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|.+++..+-. .+ ..|+...+..+......
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~--~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA--WFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH--HHHHHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch--HHHHHHHHcCCCCCCCCCCC
Confidence 9999988888999999999999999999999999999999999999999999766521 11 11222233445555555
Q ss_pred CcccccC
Q 006055 207 PKRFQTF 213 (663)
Q Consensus 207 p~~~~~~ 213 (663)
|..+...
T Consensus 166 P~~l~~~ 172 (192)
T 1w8a_A 166 PSKVRDV 172 (192)
T ss_dssp STTTTTS
T ss_pred ChHHcCC
Confidence 6555444
No 293
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.74 E-value=3.1e-18 Score=187.80 Aligned_cols=165 Identities=19% Similarity=0.193 Sum_probs=144.4
Q ss_pred ccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccc
Q 006055 60 KWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGN 128 (663)
Q Consensus 60 ~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 128 (663)
.|..|.|.. ..++.|+|++|++++ +++..|.++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 478899953 368899999999995 54457899999999999999999988999999999999999999
Q ss_pred cccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCc
Q 006055 129 HFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPK 208 (663)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 208 (663)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99977777889999999999999999988899999999999999999999988899999999999999999999976666
Q ss_pred ccccCCCCCc---cCCcCCC
Q 006055 209 RFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 209 ~~~~~~~~~~---~~~~l~~ 225 (663)
.|..++.+.. .+|.+.+
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCE
T ss_pred HhcccCCCcEEeCCCCcCcE
Confidence 6766665543 4555443
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=3.1e-18 Score=176.35 Aligned_cols=157 Identities=23% Similarity=0.214 Sum_probs=130.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP-SDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.++ .+|.. +..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|..+..+++|+.|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 57889999999998 67764 6889999999999999987554 578889999999999999988888888899999999
Q ss_pred ccccccccc-cCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcC
Q 006055 148 NLATNNFSG-EIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSL 223 (663)
Q Consensus 148 ~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l 223 (663)
+|++|++++ .+|..+..+++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+..|..++.+. +.+|.+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 999999986 5788899999999999999999988888888999999999999999877666666655554 356666
Q ss_pred CCCC
Q 006055 224 CGKP 227 (663)
Q Consensus 224 ~~~p 227 (663)
.+.+
T Consensus 236 ~~~~ 239 (306)
T 2z66_A 236 MTSK 239 (306)
T ss_dssp CBCS
T ss_pred cccC
Confidence 5543
No 295
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=6.8e-19 Score=202.02 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=127.5
Q ss_pred ChHHHHHHHHHHHhcC----CCCcCCcCCCCCCCccceeEecCCcEEEEEcCCCCcc------------------c----
Q 006055 30 LSSDRAALLALRSSVG----GRTLLWNVYEASPCKWAGVECEQNRVTMLRLPGVALS------------------G---- 83 (663)
Q Consensus 30 ~~~d~~all~~~~~~~----~~~~~w~~~~~~~c~w~gv~c~~~~v~~L~L~~~~l~------------------g---- 83 (663)
...++++|+++..++. .....|......++.|.++.++..+++.|+|.+|++. +
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 4568999999998874 2223465444446789999888777777766554433 1
Q ss_pred ----ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCC
Q 006055 84 ----QIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIP 159 (663)
Q Consensus 84 ----~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 159 (663)
.+|++.|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 134456788999999999999998 47888889999999999999999 88999999999999999999999 889
Q ss_pred CCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCC----CCccCCcCCCCC
Q 006055 160 SGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGS----NSFLGNSLCGKP 227 (663)
Q Consensus 160 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~----~~~~~~~l~~~p 227 (663)
..|++|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +.+.+|.+.+..
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 99999999999999999998 78888999999999999999999999987755432 223455565543
No 296
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.73 E-value=3e-18 Score=182.82 Aligned_cols=156 Identities=21% Similarity=0.193 Sum_probs=136.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|++++|.++ .+|..+|..+++|++|+|++|.|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46788999999998 89988889999999999999999998888999999999999999999998899999999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l~~ 225 (663)
|++|+++...+..|.++++|++|+|++|++++..|..+..+++|+.|++++|++++.....+..+..+.+.+|.+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccc
Confidence 99999995444457999999999999999998888899999999999999999997655556566555555555443
No 297
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=159.70 Aligned_cols=129 Identities=26% Similarity=0.305 Sum_probs=117.1
Q ss_pred EEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccc
Q 006055 73 MLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATN 152 (663)
Q Consensus 73 ~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (663)
.+++++|+++ .+|.++ .++|+.|+|++|+|+. +|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~---~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGI---PRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCC---CTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCC---CCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5677788888 888754 3789999999999985 7899999999999999999999888899999999999999999
Q ss_pred cccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 153 NFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++.+.-
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888889999999999999999999777778999999999999999998643
No 298
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.72 E-value=5.6e-18 Score=167.85 Aligned_cols=137 Identities=17% Similarity=0.171 Sum_probs=123.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCC-CCCCCCccccCCCCCceEEccc-ccccCchhhhhcCCccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNS-LTSQLPSDLASCSNLRNLYLQG-NHFSGEVPLFLVGLHHLVR 146 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~ 146 (663)
..++.|+|++|+++ .+|+..|+++++|+.|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|+.
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 57999999999999 6776678999999999999997 9887777899999999999999 9999777788999999999
Q ss_pred cccccccccccCCCCCccccccc---ccccccc-cccCcCCCCCCCCCCCC-EEEeecCcCCCCCCcc
Q 006055 147 LNLATNNFSGEIPSGFKNLTKLK---TLFLENN-RLSGSIPGFDDVLPNLQ-QLNVSNNLLNGSIPKR 209 (663)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~ 209 (663)
|+|++|++++ +|. |.++++|+ +|+|++| ++++..+..|..+++|+ .|++++|+++ .+|..
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999995 776 88888888 9999999 99977777899999999 9999999999 55543
No 299
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=3.9e-18 Score=159.18 Aligned_cols=137 Identities=26% Similarity=0.269 Sum_probs=121.5
Q ss_pred CcEEEEEcCCCCcc-cccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALS-GQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|+++ |.+|. .+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 57999999999998 88987 479999999999999999985 789999999999999999998899988889999999
Q ss_pred ccccccccccC-CCCCcccccccccccccccccCcCC---CCCCCCCCCCEEEeecCcCCCCCCcc
Q 006055 148 NLATNNFSGEI-PSGFKNLTKLKTLFLENNRLSGSIP---GFDDVLPNLQQLNVSNNLLNGSIPKR 209 (663)
Q Consensus 148 ~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~g~~p~~ 209 (663)
+|++|+|++.. +..+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+. .+|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999998642 2789999999999999999996555 47899999999999999987 55543
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.71 E-value=1.7e-17 Score=180.59 Aligned_cols=162 Identities=22% Similarity=0.206 Sum_probs=119.1
Q ss_pred cceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccc
Q 006055 61 WAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNH 129 (663)
Q Consensus 61 w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 129 (663)
|..|.|.. .+++.|+|++|++++ +++..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCce-ECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 57888853 368999999999995 444578999999999999999999888899999999999999999
Q ss_pred ccCchhhhhcCCccccccccccccccccCCCC-------------------------CcccccccccccccccccCcCCC
Q 006055 130 FSGEVPLFLVGLHHLVRLNLATNNFSGEIPSG-------------------------FKNLTKLKTLFLENNRLSGSIPG 184 (663)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------------------------~~~l~~L~~L~l~~N~l~~~~p~ 184 (663)
|++..+..|..+++|++|+|++|+|+...+.. |.++++|++|+|++|+|++ +|
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-
Confidence 99777777888999999999998887544433 4445555555555565553 23
Q ss_pred CCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 185 FDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 185 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
.+..+++|+.|+|++|++++..|..|..++.+.. .+|.+.+
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 2456666777777777777666666666555443 4444443
No 301
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=1.6e-17 Score=180.95 Aligned_cols=138 Identities=23% Similarity=0.268 Sum_probs=95.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|++++.+|. .|+++++|+.|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 3566777777777655443 566777777777777777766666677777777777777777666666677777777777
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 77777776666677777777777777777776555566677777777777777776666
No 302
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.71 E-value=2e-17 Score=194.09 Aligned_cols=166 Identities=22% Similarity=0.193 Sum_probs=143.4
Q ss_pred CccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCC-CccccCCCCCceEEcccccccCchhhh
Q 006055 59 CKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQL-PSDLASCSNLRNLYLQGNHFSGEVPLF 137 (663)
Q Consensus 59 c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 137 (663)
|.|..|.+-..+++.|+|++|.+++..| ..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 5677777755789999999999995555 46899999999999999776666 788999999999999999999989999
Q ss_pred hcCCccccccccccccccccCCCC--CcccccccccccccccccCcCC-CCCCCCCCCCEEEeecCcCCCCCCcccccC-
Q 006055 138 LVGLHHLVRLNLATNNFSGEIPSG--FKNLTKLKTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLLNGSIPKRFQTF- 213 (663)
Q Consensus 138 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~- 213 (663)
|.++++|++|+|++|++++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++..|..|..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 999999999999999999877765 9999999999999999998765 578999999999999999999988877544
Q ss_pred ----CCCCccCCcCCC
Q 006055 214 ----GSNSFLGNSLCG 225 (663)
Q Consensus 214 ----~~~~~~~~~l~~ 225 (663)
..+.+.+|.+.+
T Consensus 173 ~~~L~~L~L~~n~l~~ 188 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYS 188 (844)
T ss_dssp HCSSCCCEECCSBSCC
T ss_pred CCccceEECCCCcccc
Confidence 444445565554
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=179.24 Aligned_cols=156 Identities=31% Similarity=0.285 Sum_probs=110.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccc-ccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNH-FSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|+|+ .+|.+.|..+++|+.|+|++|.|++..+..|.++++|+.|+|++|+ +....+..|.++++|+.|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 57999999999998 7777788999999999999999988767678888888888888744 443333467777777777
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~ 224 (663)
+|++|+|+ .+| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..++.+.. .+|.+.
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 77777776 444 3666677777777777777666666666777777777777776666666555544433 444444
Q ss_pred CCC
Q 006055 225 GKP 227 (663)
Q Consensus 225 ~~p 227 (663)
+.|
T Consensus 269 ~~~ 271 (440)
T 3zyj_A 269 LLP 271 (440)
T ss_dssp CCC
T ss_pred ccC
Confidence 433
No 304
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.70 E-value=6.2e-18 Score=171.38 Aligned_cols=158 Identities=25% Similarity=0.266 Sum_probs=123.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .++...|.++++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+..+..+++|+.|+
T Consensus 52 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 57889999999888 55555788899999999999999887778888999999999999999877776788889999999
Q ss_pred ccccccccc-CCCCCcccccccccccccccccCcCCCCCCCCCCCC----EEEeecCcCCCCCCccccc--CCCCCccCC
Q 006055 149 LATNNFSGE-IPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQ----QLNVSNNLLNGSIPKRFQT--FGSNSFLGN 221 (663)
Q Consensus 149 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~g~~p~~~~~--~~~~~~~~~ 221 (663)
|++|++++. +|..|.++++|++|+|++|++++..+..+..+++|+ .|++++|++++..+..+.. +..+.+.+|
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 999998863 688888899999999999998877666676666666 7888888888665554442 333444556
Q ss_pred cCCCCC
Q 006055 222 SLCGKP 227 (663)
Q Consensus 222 ~l~~~p 227 (663)
.+.+.|
T Consensus 211 ~l~~~~ 216 (276)
T 2z62_A 211 QLKSVP 216 (276)
T ss_dssp CCSCCC
T ss_pred ceeecC
Confidence 555544
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.70 E-value=1.4e-17 Score=188.12 Aligned_cols=166 Identities=20% Similarity=0.165 Sum_probs=142.9
Q ss_pred cceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccc
Q 006055 61 WAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNH 129 (663)
Q Consensus 61 w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 129 (663)
+.-|.|.. ..++.|+|++|.+++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 45677843 478999999999995 544578999999999999999999889999999999999999999
Q ss_pred ccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc
Q 006055 130 FSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR 209 (663)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 209 (663)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|+.|++++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99999999999999999999999999877888999999999999999999754344445999999999999999888888
Q ss_pred cccCCCCC-----ccCCcCCCCC
Q 006055 210 FQTFGSNS-----FLGNSLCGKP 227 (663)
Q Consensus 210 ~~~~~~~~-----~~~~~l~~~p 227 (663)
|..+..+. +.+|.+.+.+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~ 195 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIE 195 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEEC
T ss_pred hhhhcccceeEEecCCCccCccC
Confidence 87777655 3455555443
No 306
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.70 E-value=4.2e-18 Score=193.33 Aligned_cols=156 Identities=21% Similarity=0.258 Sum_probs=139.9
Q ss_pred CCcEEEEEcCCCCcccc-----------------cCccccC--CCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccc
Q 006055 68 QNRVTMLRLPGVALSGQ-----------------IPLGILG--NLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGN 128 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~-----------------~p~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 128 (663)
..+++.|+|++|.++|. +|.. ++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 36899999999999986 9974 68 9999999999999999999999999999999999999
Q ss_pred c-ccC-chhhhhcCC------ccccccccccccccccCCC--CCcccccccccccccccccCcCCCCCCCCCCCCEEEee
Q 006055 129 H-FSG-EVPLFLVGL------HHLVRLNLATNNFSGEIPS--GFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVS 198 (663)
Q Consensus 129 ~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 198 (663)
+ ++| .+|..++.+ ++|+.|+|++|+++ .+|. .|+++++|++|+|++|+++|.+| .+..+++|+.|+|+
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 8 998 899999887 99999999999999 8998 89999999999999999999999 88999999999999
Q ss_pred cCcCCCCCCcccccCCC-CCc---cCCcCCCCC
Q 006055 199 NNLLNGSIPKRFQTFGS-NSF---LGNSLCGKP 227 (663)
Q Consensus 199 ~N~l~g~~p~~~~~~~~-~~~---~~~~l~~~p 227 (663)
+|+++ .+|..+..+.. +.. .+|.+...|
T Consensus 362 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp 393 (636)
T 4eco_A 362 YNQIT-EIPANFCGFTEQVENLSFAHNKLKYIP 393 (636)
T ss_dssp SSEEE-ECCTTSEEECTTCCEEECCSSCCSSCC
T ss_pred CCccc-cccHhhhhhcccCcEEEccCCcCcccc
Confidence 99999 88888877666 543 566665444
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.70 E-value=2.7e-18 Score=177.34 Aligned_cols=137 Identities=23% Similarity=0.245 Sum_probs=72.2
Q ss_pred cEEEEEcCCCCcccccCcccc-CCCCCCCEEEccCCCCCCCCCccccCC-----CCCceEEcccccccCchhhhhcCCcc
Q 006055 70 RVTMLRLPGVALSGQIPLGIL-GNLTSLRTLSLRFNSLTSQLPSDLASC-----SNLRNLYLQGNHFSGEVPLFLVGLHH 143 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (663)
+++.|+|++|+++|.+|..++ +.+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..|+.+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 455556666666555555432 5555566666666655554 5555544 55555555555555555555555555
Q ss_pred cccccccccccccc--CCCCC--cccccccccccccccccC--cCC-CCCCCCCCCCEEEeecCcCCCCCC
Q 006055 144 LVRLNLATNNFSGE--IPSGF--KNLTKLKTLFLENNRLSG--SIP-GFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 144 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|+.|+|++|++.+. +|..+ .++++|++|+|++|+|++ .++ ..+..+++|+.|+|++|++++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 55555555555443 12222 455555555555555552 111 223344555555555555555443
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.70 E-value=1.6e-17 Score=190.54 Aligned_cols=157 Identities=24% Similarity=0.262 Sum_probs=138.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 47999999999999 56666789999999999999999999899999999999999999999976666899999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccc-----cCCCCCccCCcC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQ-----TFGSNSFLGNSL 223 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-----~~~~~~~~~~~l 223 (663)
|++|++++..|..|+++++|++|+|++|.+++..|..+..+++|++|++++|++++..|..+. .+..+.+.+|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999977778999999999999999999999999999999999999999999988776543 344455556665
Q ss_pred CCC
Q 006055 224 CGK 226 (663)
Q Consensus 224 ~~~ 226 (663)
.+.
T Consensus 184 ~~~ 186 (680)
T 1ziw_A 184 KEF 186 (680)
T ss_dssp CCB
T ss_pred ccc
Confidence 543
No 309
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.70 E-value=1.3e-17 Score=188.51 Aligned_cols=157 Identities=24% Similarity=0.181 Sum_probs=130.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP-SDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.++ .+|. .+..+++|+.|+|++|.+++..| ..|.++++|++|+|++|.+++.+|..+.++++|+.|
T Consensus 376 ~~L~~L~L~~n~l~-~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 376 NSLRHLDLSFNGAI-IMSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp SCCCEEECCSCSEE-EECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CcccEeECCCCccc-cchh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 57888999999988 4664 57889999999999999988777 678889999999999999988888888889999999
Q ss_pred ccccccccc-cCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcC
Q 006055 148 NLATNNFSG-EIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSL 223 (663)
Q Consensus 148 ~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l 223 (663)
+|++|++++ .+|..|.++++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|..|..++.+.. .+|.+
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999887 47888888999999999999998888888888999999999999998888888877665544 55655
Q ss_pred CCCC
Q 006055 224 CGKP 227 (663)
Q Consensus 224 ~~~p 227 (663)
...|
T Consensus 534 ~~~p 537 (606)
T 3vq2_A 534 ETSK 537 (606)
T ss_dssp CCEE
T ss_pred cccC
Confidence 5433
No 310
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.69 E-value=4.9e-17 Score=171.44 Aligned_cols=162 Identities=22% Similarity=0.242 Sum_probs=134.8
Q ss_pred CCccceeEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCcccc-CCCCCceEEcccccccCchhh
Q 006055 58 PCKWAGVECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLA-SCSNLRNLYLQGNHFSGEVPL 136 (663)
Q Consensus 58 ~c~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~ 136 (663)
.|- ..-.|.. ..+++++++|+ .+|..+ .+.|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|.
T Consensus 11 ~Cp-~~C~C~~---~~l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~ 82 (361)
T 2xot_A 11 SCP-ANCLCAS---NILSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE 82 (361)
T ss_dssp TCC-TTCEEET---TEEECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT
T ss_pred CCC-CCCEECC---CEEEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh
Confidence 453 4556764 36899999998 799743 35689999999999998888887 999999999999999988888
Q ss_pred hhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCccc---ccC
Q 006055 137 FLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRF---QTF 213 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~---~~~ 213 (663)
.|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l 162 (361)
T 2xot_A 83 AFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKL 162 (361)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----C
T ss_pred hccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccC
Confidence 99999999999999999997777789999999999999999998889999999999999999999996544444 334
Q ss_pred CC---CCccCCcCCCCC
Q 006055 214 GS---NSFLGNSLCGKP 227 (663)
Q Consensus 214 ~~---~~~~~~~l~~~p 227 (663)
+. +.+.+|.+...|
T Consensus 163 ~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 163 PKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp TTCCEEECCSSCCCCCC
T ss_pred CcCCEEECCCCCCCccC
Confidence 44 444566665544
No 311
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.3e-17 Score=193.19 Aligned_cols=164 Identities=20% Similarity=0.247 Sum_probs=142.4
Q ss_pred CccceeEe---cCCcEEEEEcCCCCccc-----------------ccCccccC--CCCCCCEEEccCCCCCCCCCccccC
Q 006055 59 CKWAGVEC---EQNRVTMLRLPGVALSG-----------------QIPLGILG--NLTSLRTLSLRFNSLTSQLPSDLAS 116 (663)
Q Consensus 59 c~w~gv~c---~~~~v~~L~L~~~~l~g-----------------~~p~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~ 116 (663)
+...|+.- ...+++.|+|++|.|+| .+|.+ ++ ++++|+.|+|++|++.+.+|..|.+
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 44455432 23689999999999998 48985 45 9999999999999999999999999
Q ss_pred CCCCceEEccccc-ccC-chhhhhcCCc-------cccccccccccccccCCC--CCcccccccccccccccccCcCCCC
Q 006055 117 CSNLRNLYLQGNH-FSG-EVPLFLVGLH-------HLVRLNLATNNFSGEIPS--GFKNLTKLKTLFLENNRLSGSIPGF 185 (663)
Q Consensus 117 l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~ 185 (663)
+++|+.|+|++|+ |+| .+|..++.++ +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+| .
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~ 590 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-A 590 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-C
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-h
Confidence 9999999999998 998 8998887776 9999999999999 8999 8999999999999999999 888 8
Q ss_pred CCCCCCCCEEEeecCcCCCCCCcccccCCC-CC---ccCCcCCCCC
Q 006055 186 DDVLPNLQQLNVSNNLLNGSIPKRFQTFGS-NS---FLGNSLCGKP 227 (663)
Q Consensus 186 ~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~-~~---~~~~~l~~~p 227 (663)
+..+++|+.|+|++|+++ .+|..+..+.. +. +.+|.+...|
T Consensus 591 ~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp 635 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIP 635 (876)
T ss_dssp CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCC
T ss_pred hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCc
Confidence 999999999999999999 89988877666 54 4566665444
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=3.5e-17 Score=178.08 Aligned_cols=156 Identities=26% Similarity=0.257 Sum_probs=112.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccc-cccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGN-HFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|+|+ .+|++.|+++++|++|+|++|+|++..+..|.++++|+.|+|++| .+....+..|.++++|+.|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 57999999999999 777778899999999999999999876667888888888888874 4443333457777777777
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~ 224 (663)
+|++|++++ +| .+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..++.+.. .+|.+.
T Consensus 202 ~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 202 NLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp ECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 777777763 33 4667777777777777777666667777777777777777777666666655554433 445554
Q ss_pred CCC
Q 006055 225 GKP 227 (663)
Q Consensus 225 ~~p 227 (663)
+.|
T Consensus 280 ~~~ 282 (452)
T 3zyi_A 280 SLP 282 (452)
T ss_dssp CCC
T ss_pred ccC
Confidence 443
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.69 E-value=5.9e-17 Score=175.69 Aligned_cols=155 Identities=25% Similarity=0.302 Sum_probs=133.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .++...|.++++|++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|+.|+
T Consensus 88 ~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 88 RHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp SSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCC-ccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 57999999999999 56667899999999999999999987777899999999999999999987778999999999999
Q ss_pred cccccccccC-CCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCC
Q 006055 149 LATNNFSGEI-PSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLC 224 (663)
Q Consensus 149 l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~ 224 (663)
|++|+..+.+ +..|.++++|++|+|++|+|+ .+|. +..+++|+.|+|++|++++..|..|..++.+.. .+|.+.
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCcee
Confidence 9995544445 457999999999999999999 5664 789999999999999999988988887776654 556555
Q ss_pred CC
Q 006055 225 GK 226 (663)
Q Consensus 225 ~~ 226 (663)
+.
T Consensus 245 ~~ 246 (440)
T 3zyj_A 245 VI 246 (440)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 314
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=7.4e-18 Score=153.92 Aligned_cols=128 Identities=26% Similarity=0.277 Sum_probs=112.5
Q ss_pred CcEEEEEcCCCCcc-cccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALS-GQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|+++ |.+|. .++.+++|+.|+|++|.|++. ..+.++++|++|+|++|.+++.+|..+..+++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 56899999999998 88886 678999999999999999885 779999999999999999998899988889999999
Q ss_pred cccccccccc-CCCCCcccccccccccccccccCcCC---CCCCCCCCCCEEEeec
Q 006055 148 NLATNNFSGE-IPSGFKNLTKLKTLFLENNRLSGSIP---GFDDVLPNLQQLNVSN 199 (663)
Q Consensus 148 ~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 199 (663)
+|++|++++. .|..+.++++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34789999999999999999996655 4788899999998764
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.69 E-value=7.8e-18 Score=173.89 Aligned_cols=157 Identities=22% Similarity=0.187 Sum_probs=129.5
Q ss_pred CCcEEEEEcCCCCcccccCccccCCC-----CCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCc--hhhhh--
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNL-----TSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGE--VPLFL-- 138 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~-- 138 (663)
..+++.|+|++|++++. |. .++.+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.+. +|..+
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred CCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 46799999999999966 64 56776 9999999999999998889999999999999999998876 34455
Q ss_pred cCCccccccccccccccc--cCC-CCCcccccccccccccccccCcCC-CCCCCCCCCCEEEeecCcCCCCCCcccc-cC
Q 006055 139 VGLHHLVRLNLATNNFSG--EIP-SGFKNLTKLKTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLLNGSIPKRFQ-TF 213 (663)
Q Consensus 139 ~~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~~ 213 (663)
..+++|++|+|++|+|++ .++ ..+.++++|++|+|++|+|++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L 276 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKL 276 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCc
Confidence 899999999999999983 222 334678999999999999998775 46677899999999999999 7787665 45
Q ss_pred CCCCccCCcCCCCC
Q 006055 214 GSNSFLGNSLCGKP 227 (663)
Q Consensus 214 ~~~~~~~~~l~~~p 227 (663)
..+.+.+|.+.+.|
T Consensus 277 ~~L~Ls~N~l~~~p 290 (312)
T 1wwl_A 277 SVLDLSYNRLDRNP 290 (312)
T ss_dssp EEEECCSSCCCSCC
T ss_pred eEEECCCCCCCCCh
Confidence 55666777776654
No 316
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.69 E-value=5.5e-17 Score=169.02 Aligned_cols=163 Identities=26% Similarity=0.363 Sum_probs=126.5
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG 127 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (663)
|.|..+.|.. .+++.|+|++|+++ .+++..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 6899998853 26788999999988 45555688899999999999999888788899999999999999
Q ss_pred ccccCchhhhhcCCccccccccccccccccCCCCCccccccccccccccccc--CcCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 128 NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLS--GSIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++ +..|..+..+ +|+.|++++|++++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 9988 5665554 78888889888888655566888888888888888885 3667777777 88888888888885
Q ss_pred CCc-ccccCCCCCccCCcCCCCC
Q 006055 206 IPK-RFQTFGSNSFLGNSLCGKP 227 (663)
Q Consensus 206 ~p~-~~~~~~~~~~~~~~l~~~p 227 (663)
+|. .+.++..+.+.+|.+.+.+
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCC
T ss_pred cCccccCCCCEEECCCCcCCccC
Confidence 443 3345666666666665544
No 317
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.68 E-value=4.4e-17 Score=168.05 Aligned_cols=158 Identities=19% Similarity=0.124 Sum_probs=114.8
Q ss_pred CCcEEEEEcCCCCcccccCc---cccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCc--hh--hhhcC
Q 006055 68 QNRVTMLRLPGVALSGQIPL---GILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGE--VP--LFLVG 140 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p--~~~~~ 140 (663)
..+++.|+|++|.+++.+|. ..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++.+. ++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 35688888888888875551 2235688888888888888887778888888888888888887653 22 22367
Q ss_pred CccccccccccccccccCCC----CCcccccccccccccccccCcCCCCCCCC---CCCCEEEeecCcCCCCCCccc-cc
Q 006055 141 LHHLVRLNLATNNFSGEIPS----GFKNLTKLKTLFLENNRLSGSIPGFDDVL---PNLQQLNVSNNLLNGSIPKRF-QT 212 (663)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~g~~p~~~-~~ 212 (663)
+++|++|+|++|+++ .+|. .+.++++|++|+|++|+|++.+|..+..+ ++|++|+|++|+|+ .+|..+ .+
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~ 273 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAK 273 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCC
Confidence 888888888888886 3333 24677888888888888887777766666 68888888888888 556544 34
Q ss_pred CCCCCccCCcCCCCC
Q 006055 213 FGSNSFLGNSLCGKP 227 (663)
Q Consensus 213 ~~~~~~~~~~l~~~p 227 (663)
+..+.+.+|.+.+.|
T Consensus 274 L~~L~Ls~N~l~~~~ 288 (310)
T 4glp_A 274 LRVLDLSSNRLNRAP 288 (310)
T ss_dssp CSCEECCSCCCCSCC
T ss_pred CCEEECCCCcCCCCc
Confidence 555555677776644
No 318
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.68 E-value=3.7e-17 Score=170.14 Aligned_cols=162 Identities=23% Similarity=0.340 Sum_probs=122.3
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG 127 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (663)
|.|..+.|.. ..++.|+|++|+++ .+|+..|+++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 6899999963 36889999999999 56666789999999999999999998899999999999999999
Q ss_pred ccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccC--cCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 128 NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG--SIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
|+++ .+|..+. ++|+.|++++|++++..+..|.++++|++|+|++|+++. ..+..+..+++|+.|++++|+++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-
Confidence 9988 5665543 677788888888776656667777777777777777753 566667777777777777777774
Q ss_pred CCcc-cccCCCCCccCCcCCC
Q 006055 206 IPKR-FQTFGSNSFLGNSLCG 225 (663)
Q Consensus 206 ~p~~-~~~~~~~~~~~~~l~~ 225 (663)
+|.. +..+..+.+.+|.+.+
T Consensus 186 l~~~~~~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 186 IPQGLPPSLTELHLDGNKITK 206 (330)
T ss_dssp CCSSCCTTCSEEECTTSCCCE
T ss_pred CCccccccCCEEECCCCcCCc
Confidence 3432 3344444444554443
No 319
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.68 E-value=3.7e-17 Score=183.26 Aligned_cols=147 Identities=20% Similarity=0.202 Sum_probs=133.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+++..|.++++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 47999999999999 45555789999999999999999998888999999999999999999988889999999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccC-cCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++++++|+.|++++|++++..|..+..+..+
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 99999996666679999999999999999997 579999999999999999999998888877766555
No 320
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.67 E-value=4.3e-17 Score=161.39 Aligned_cols=154 Identities=20% Similarity=0.185 Sum_probs=129.6
Q ss_pred CcEEEEEcCCCC-cccccCccccCCCCCCCEEEccC-CCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccc-
Q 006055 69 NRVTMLRLPGVA-LSGQIPLGILGNLTSLRTLSLRF-NSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLV- 145 (663)
Q Consensus 69 ~~v~~L~L~~~~-l~g~~p~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~- 145 (663)
.+++.|+|++|. ++ .+|+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|.+++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 579999999997 77 77777889999999999999 99998777889999999999999999996 776 88888888
Q ss_pred --ccccccc-cccccCCCCCccccccc-ccccccccccCcCCC-CCCCCCCCCEEEeecCc-CCCCCCcccccC-CCCC-
Q 006055 146 --RLNLATN-NFSGEIPSGFKNLTKLK-TLFLENNRLSGSIPG-FDDVLPNLQQLNVSNNL-LNGSIPKRFQTF-GSNS- 217 (663)
Q Consensus 146 --~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~-l~g~~p~~~~~~-~~~~- 217 (663)
.|++++| ++++..+..|.++++|+ +|+|++|+++ .+|. .+.. ++|+.|+|++|+ +++..+..|..+ +.+.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~ 209 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSL 209 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcE
Confidence 9999999 99977677799999999 9999999999 5555 4444 899999999995 987667777766 5544
Q ss_pred --ccCCcCCCCC
Q 006055 218 --FLGNSLCGKP 227 (663)
Q Consensus 218 --~~~~~l~~~p 227 (663)
+.+|.+.+.|
T Consensus 210 L~l~~N~l~~l~ 221 (239)
T 2xwt_C 210 LDVSQTSVTALP 221 (239)
T ss_dssp EECTTCCCCCCC
T ss_pred EECCCCccccCC
Confidence 3556665544
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.67 E-value=3.4e-17 Score=185.11 Aligned_cols=158 Identities=19% Similarity=0.165 Sum_probs=137.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCcc-ccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSD-LASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.+.+..| ..|..+++|+.|+|++|.+++..|.. +.++++|++|+|++|.+++..|..+..+++|+.|
T Consensus 376 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKT-EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECT-TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCH-HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 589999999999996555 46899999999999999999876654 8999999999999999999999999999999999
Q ss_pred cccccccccc---CCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC--ccCCc
Q 006055 148 NLATNNFSGE---IPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS--FLGNS 222 (663)
Q Consensus 148 ~l~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~--~~~~~ 222 (663)
+|++|++++. .+..+..+++|++|+|++|++++.+|..|..+++|+.|+|++|++++.+|..|..++.+. +.+|.
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~L~L~~N~ 534 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNH 534 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSCEEECCSSC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccccEEECcCCc
Confidence 9999999873 336689999999999999999988899999999999999999999999999998888762 25566
Q ss_pred CCCCC
Q 006055 223 LCGKP 227 (663)
Q Consensus 223 l~~~p 227 (663)
+.+.+
T Consensus 535 l~~~~ 539 (606)
T 3t6q_A 535 ISIIL 539 (606)
T ss_dssp CCCCC
T ss_pred ccccC
Confidence 66544
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.67 E-value=2.9e-17 Score=157.58 Aligned_cols=140 Identities=19% Similarity=0.296 Sum_probs=113.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|. +..+++|+.|+|++|.++. +..+..+++|++|+|++|.+++..|..+..+++|+.|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLTG--IEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCTT--GGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChHH--HhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 46888999999888 7773 6888999999999997764 44788889999999999999887888888899999999
Q ss_pred cccccccccCCCCCccccccccccccccc-ccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNR-LSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS 217 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~ 217 (663)
|++|++++..|..+.++++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..++.+.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~ 184 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLN 184 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCC
Confidence 99999988778888888999999999998 55 555 57888899999999999885 33 455555544
No 323
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.67 E-value=4.7e-17 Score=180.36 Aligned_cols=156 Identities=27% Similarity=0.381 Sum_probs=125.2
Q ss_pred CCcCCCCCCC-----cccee-EecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceE
Q 006055 50 LWNVYEASPC-----KWAGV-ECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNL 123 (663)
Q Consensus 50 ~w~~~~~~~c-----~w~gv-~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (663)
.|.. +.+|| .|.|+ .|..++++.|+|++|+|++ +|..+ +++|+.|+|++|+|+. +| ..+++|++|
T Consensus 35 ~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~~-ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALIS-LP---ELPASLEYL 105 (571)
T ss_dssp HHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCSC-CC---CCCTTCCEE
T ss_pred HHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCcc-cc---cccCCCCEE
Confidence 3543 44578 79999 7988899999999999995 98754 3889999999999985 77 557999999
Q ss_pred EcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 124 YLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 124 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|+
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCC
Confidence 999999997 777 665 89999999999996 776 67899999999999996 665 5788999999999998
Q ss_pred CCCCcccc-cCCCCCccCCcCCCCCC
Q 006055 204 GSIPKRFQ-TFGSNSFLGNSLCGKPL 228 (663)
Q Consensus 204 g~~p~~~~-~~~~~~~~~~~l~~~p~ 228 (663)
+ +|. |. ++..+.+.+|.+...|.
T Consensus 174 ~-lp~-l~~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 174 F-LPE-LPESLEALDVSTNLLESLPA 197 (571)
T ss_dssp C-CCC-CCTTCCEEECCSSCCSSCCC
T ss_pred C-cch-hhCCCCEEECcCCCCCchhh
Confidence 6 666 43 44445556676665443
No 324
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=9.4e-17 Score=181.00 Aligned_cols=112 Identities=22% Similarity=0.286 Sum_probs=101.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.+++ +|+..|+++++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|+.|+
T Consensus 75 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 478999999999995 4445789999999999999999998888899999999999999999977777789999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCc
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGS 181 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 181 (663)
|++|+|++..|..|+++++|++|+|++|.|++.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 999999988888999999999999999998854
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.66 E-value=3.1e-17 Score=169.18 Aligned_cols=158 Identities=20% Similarity=0.179 Sum_probs=129.5
Q ss_pred CcEEEEEcCCCCcccccCcccc-CCCCCCCEEEccCCCCCCCCC----ccccCCCCCceEEcccccccCchhhhhcCCcc
Q 006055 69 NRVTMLRLPGVALSGQIPLGIL-GNLTSLRTLSLRFNSLTSQLP----SDLASCSNLRNLYLQGNHFSGEVPLFLVGLHH 143 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~-~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (663)
.+++.|+|++|++++.+|..++ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 3599999999999998887544 899999999999999998666 34567999999999999999988899999999
Q ss_pred cccccccccccccc--C--CCCCcccccccccccccccccCcCCC----CCCCCCCCCEEEeecCcCCCCCCcccccC--
Q 006055 144 LVRLNLATNNFSGE--I--PSGFKNLTKLKTLFLENNRLSGSIPG----FDDVLPNLQQLNVSNNLLNGSIPKRFQTF-- 213 (663)
Q Consensus 144 L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~g~~p~~~~~~-- 213 (663)
|++|+|++|++.+. + +..++++++|++|+|++|+|+ .+|. .+..+++|++|+|++|++++.+|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 99999999998752 2 233578999999999999997 3333 35788999999999999999888776554
Q ss_pred ----CCCCccCCcCCCCC
Q 006055 214 ----GSNSFLGNSLCGKP 227 (663)
Q Consensus 214 ----~~~~~~~~~l~~~p 227 (663)
..+...+|.+...|
T Consensus 250 ~~~L~~L~Ls~N~l~~lp 267 (310)
T 4glp_A 250 SSALNSLNLSFAGLEQVP 267 (310)
T ss_dssp CTTCCCEECCSSCCCSCC
T ss_pred cCcCCEEECCCCCCCchh
Confidence 33334566665433
No 326
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.66 E-value=9.4e-17 Score=175.99 Aligned_cols=149 Identities=24% Similarity=0.219 Sum_probs=135.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.+++..| ..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 589999999999996555 4789999999999999999987677799999999999999999998899999999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
|++|++++..|..|.++++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+..+..
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~ 204 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKV 204 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccce
Confidence 9999999888999999999999999999999777777899999999999999999888878877766654
No 327
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.66 E-value=1.4e-16 Score=186.86 Aligned_cols=132 Identities=27% Similarity=0.280 Sum_probs=114.4
Q ss_pred cCCCCCCCEEEccCCCCCCCCCc-cccCCCCCceEEccccccc-----CchhhhhcCCccccccccccccccccCCCCCc
Q 006055 90 LGNLTSLRTLSLRFNSLTSQLPS-DLASCSNLRNLYLQGNHFS-----GEVPLFLVGLHHLVRLNLATNNFSGEIPSGFK 163 (663)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 163 (663)
+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 45789999999999999875443 4667899999999999997 45567789999999999999999988888999
Q ss_pred ccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcC
Q 006055 164 NLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSL 223 (663)
Q Consensus 164 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l 223 (663)
++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..|..+..+.+.+|++
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKF 559 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECC
T ss_pred chhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCc
Confidence 999999999999999987777765 8999999999999999999988887777766653
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.66 E-value=1.2e-16 Score=153.35 Aligned_cols=129 Identities=18% Similarity=0.250 Sum_probs=114.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.++ .++ .+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 57999999999776 444 479999999999999999988899999999999999999999998999999999999999
Q ss_pred ccccc-ccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCC
Q 006055 149 LATNN-FSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 149 l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
|++|+ ++ .+| .+.++++|++|+|++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 99998 55 666 69999999999999999995 44 68899999999999999864
No 329
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.66 E-value=1.2e-16 Score=181.22 Aligned_cols=159 Identities=22% Similarity=0.268 Sum_probs=138.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccc-cCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHF-SGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L 147 (663)
..++.+++.+++.....+...|..+++|+.++++.|.+++..|..+..+++|+.|+|++|.+ .+.+|..|..+++|+.|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 46777888888887777777889999999999999999998899999999999999999984 45678889999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccC-CCCCccCCcCCCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTF-GSNSFLGNSLCGK 226 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~-~~~~~~~~~l~~~ 226 (663)
+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+ +.+... .+.++
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L--~L~~N 577 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL--NLTQN 577 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE--ECTTC
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE--EeeCC
Confidence 999999999889999999999999999999998888899999999999999999999999988776 345432 35556
Q ss_pred CCC
Q 006055 227 PLQ 229 (663)
Q Consensus 227 p~~ 229 (663)
|+.
T Consensus 578 p~~ 580 (635)
T 4g8a_A 578 DFA 580 (635)
T ss_dssp CBC
T ss_pred CCc
Confidence 665
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=179.14 Aligned_cols=145 Identities=25% Similarity=0.246 Sum_probs=84.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP-SDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
+++.|+|++|.++ .+|.. +..+++|+.|+|++|.+++..| ..+.++++|++|+|++|.+++.+|..|.++++|+.|+
T Consensus 374 ~L~~L~l~~n~l~-~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCCEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCccc-ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 4555555555555 23332 4556666666666666655444 3455666666666666666655666666666666666
Q ss_pred ccccccc-ccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC
Q 006055 149 LATNNFS-GEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN 216 (663)
Q Consensus 149 l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~ 216 (663)
|++|+++ +.+|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..|..++.+
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 520 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSL 520 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCC
Confidence 6666665 4556666666666666666666665556666666666666666666665555555554444
No 331
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.65 E-value=2.1e-16 Score=168.46 Aligned_cols=112 Identities=22% Similarity=0.293 Sum_probs=94.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.++ .+++..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 47888999999988 55555788899999999999999887788888999999999999999855555578899999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCc
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGS 181 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 181 (663)
|++|++++..|..|.++++|++|+|++|++++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999877777888889999999998888753
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.65 E-value=3.6e-16 Score=162.82 Aligned_cols=154 Identities=22% Similarity=0.265 Sum_probs=102.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc--CchhhhhcCC-----
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS--GEVPLFLVGL----- 141 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l----- 141 (663)
.+++.|+|++|.++ .+|..++ ++|++|+|++|.|++..+..|.++++|+.|+|++|.++ +..|..+..+
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCC
T ss_pred CCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEE
Confidence 56788888888887 6776443 67777777777777655556777777777777777775 3455555544
Q ss_pred ---------------ccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 142 ---------------HHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 142 ---------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|+++ .+
T Consensus 178 ~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 256 (332)
T 2ft3_A 178 RISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256 (332)
T ss_dssp BCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BC
T ss_pred ECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ec
Confidence 45666666666666555566777777777777777777666666777777777777777777 66
Q ss_pred CcccccCCCCCc---cCCcCCCCC
Q 006055 207 PKRFQTFGSNSF---LGNSLCGKP 227 (663)
Q Consensus 207 p~~~~~~~~~~~---~~~~l~~~p 227 (663)
|..+..++.+.. .+|.+.+.+
T Consensus 257 p~~l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 257 PAGLPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp CTTGGGCTTCCEEECCSSCCCBCC
T ss_pred ChhhhcCccCCEEECCCCCCCccC
Confidence 666655554443 445554443
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.65 E-value=2.6e-16 Score=163.71 Aligned_cols=142 Identities=23% Similarity=0.254 Sum_probs=76.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc--CchhhhhcCCcccc-
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS--GEVPLFLVGLHHLV- 145 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~- 145 (663)
.+++.|+|++|.++ .+|..++ ++|+.|+|++|.+++..+..|.++++|++|+|++|.++ +..+..+.++++|+
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~ 175 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 175 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCE
T ss_pred CCCCEEECCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCE
Confidence 35667777777666 5554332 45555555555555544444555555555555555553 23444455554444
Q ss_pred --------------------ccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 146 --------------------RLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 146 --------------------~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
.|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|+.|+|++|+++ .
T Consensus 176 L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 254 (330)
T 1xku_A 176 IRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-K 254 (330)
T ss_dssp EECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-S
T ss_pred EECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-c
Confidence 4455555555444455555555555555555555554445555555555555555555 4
Q ss_pred CCcccccCCC
Q 006055 206 IPKRFQTFGS 215 (663)
Q Consensus 206 ~p~~~~~~~~ 215 (663)
+|..+..++.
T Consensus 255 lp~~l~~l~~ 264 (330)
T 1xku_A 255 VPGGLADHKY 264 (330)
T ss_dssp CCTTTTTCSS
T ss_pred CChhhccCCC
Confidence 5554444443
No 334
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.64 E-value=5.7e-16 Score=173.41 Aligned_cols=134 Identities=23% Similarity=0.278 Sum_probs=105.6
Q ss_pred CCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccC--chhhhhcCCccccccccccccccccCCC-CCccccc
Q 006055 91 GNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSG--EVPLFLVGLHHLVRLNLATNNFSGEIPS-GFKNLTK 167 (663)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~ 167 (663)
+.+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 677888899999999988888888888999999999998886 4567788888999999999998875655 4788888
Q ss_pred ccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCCCC
Q 006055 168 LKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCGKP 227 (663)
Q Consensus 168 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~~p 227 (663)
|++|+|++|+|++.+|..+. ++|+.|+|++|+|+ .+|..+..++.+.. .+|.+...|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 489 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVP 489 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCC
Confidence 88888888888877776544 68888888888888 67766656655543 556665544
No 335
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.64 E-value=7.8e-17 Score=169.40 Aligned_cols=158 Identities=20% Similarity=0.170 Sum_probs=132.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchh-hhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVP-LFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 147 (663)
.+++.|+|++|++++ +++..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+ ..|..+++|+.|
T Consensus 76 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCc-cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 689999999999995 544578999999999999999998555559999999999999999995443 478999999999
Q ss_pred ccccc-cccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc-c---ccCCCCCccCCc
Q 006055 148 NLATN-NFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR-F---QTFGSNSFLGNS 222 (663)
Q Consensus 148 ~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~---~~~~~~~~~~~~ 222 (663)
++++| .+++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|+++ .+|.. + .++..+.+.+|.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~ 233 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTD 233 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCB
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCc
Confidence 99999 477666788999999999999999999999999999999999999999997 44543 2 334445556777
Q ss_pred CCCCCC
Q 006055 223 LCGKPL 228 (663)
Q Consensus 223 l~~~p~ 228 (663)
+.+.+.
T Consensus 234 l~~~~~ 239 (353)
T 2z80_A 234 LDTFHF 239 (353)
T ss_dssp CTTCCC
T ss_pred cccccc
Confidence 766543
No 336
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.64 E-value=1.1e-16 Score=175.42 Aligned_cols=151 Identities=23% Similarity=0.231 Sum_probs=78.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCc----------------cccCCCCCceEEcccccccC
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPS----------------DLASCSNLRNLYLQGNHFSG 132 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~N~l~~ 132 (663)
.+++.|+|++|.+++.+| |+.+++|+.|+|++|.|++..+. ....+++|+.|+|++|.+++
T Consensus 58 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 355556666665554333 45555555555555544432110 00123445555555555555
Q ss_pred chhhhhcCCccccccccccccccccCCCCCc-ccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccc
Q 006055 133 EVPLFLVGLHHLVRLNLATNNFSGEIPSGFK-NLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQ 211 (663)
Q Consensus 133 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 211 (663)
..|..|+.+++|+.|+|++|+|++.+|..+. ++++|++|+|++|.|++..+ +..+++|+.|+|++|+|++..| .|.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~ 211 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQ 211 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGG
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHc
Confidence 5555566666666666666666655555554 56666666666666664422 2246666666666666665333 344
Q ss_pred cCCCCC---ccCCcCCC
Q 006055 212 TFGSNS---FLGNSLCG 225 (663)
Q Consensus 212 ~~~~~~---~~~~~l~~ 225 (663)
.++.+. +.+|.+++
T Consensus 212 ~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 212 SAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGTTCSEEECTTSCCCE
T ss_pred CCCCccEEEecCCcCcc
Confidence 443333 34454444
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=3.9e-16 Score=172.95 Aligned_cols=134 Identities=21% Similarity=0.273 Sum_probs=110.9
Q ss_pred CCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccC--chhhhhcCCccccccccccccccccCCC-CCccccc
Q 006055 91 GNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSG--EVPLFLVGLHHLVRLNLATNNFSGEIPS-GFKNLTK 167 (663)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~ 167 (663)
..+++|++|+|++|.+++.+|..+.++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678899999999999998888899999999999999999986 5678889999999999999999875665 4888899
Q ss_pred ccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCCCC
Q 006055 168 LKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCGKP 227 (663)
Q Consensus 168 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~~p 227 (663)
|++|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+..++.+.. .+|.+...|
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVP 460 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccC
Confidence 99999999999888776654 78999999999998 78877666666554 556665444
No 338
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.63 E-value=8.3e-16 Score=176.14 Aligned_cols=159 Identities=21% Similarity=0.204 Sum_probs=107.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc--CchhhhhcCCccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS--GEVPLFLVGLHHLVR 146 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~ 146 (663)
.+++.|+|++|.+++.+|...|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.++ +.+|..|.++++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 356666666666666666556666677777777776666555555666666666666666655 456777788888888
Q ss_pred cccccccccccCCCCCcccccccccccccccccCcCC--------CCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC-
Q 006055 147 LNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIP--------GFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS- 217 (663)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~- 217 (663)
|+|++|+|++..|..|.++++|++|+|++|++++..+ ..+..+++|+.|+|++|+++...+..|..++.+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 8888888887666678888888888888888875321 2367778888888888888743334566555544
Q ss_pred --ccCCcCCCCC
Q 006055 218 --FLGNSLCGKP 227 (663)
Q Consensus 218 --~~~~~l~~~p 227 (663)
+.+|.+.+.|
T Consensus 565 L~Ls~N~l~~l~ 576 (680)
T 1ziw_A 565 IDLGLNNLNTLP 576 (680)
T ss_dssp EECCSSCCCCCC
T ss_pred eECCCCCCCcCC
Confidence 3556665544
No 339
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=3.6e-16 Score=173.29 Aligned_cols=146 Identities=27% Similarity=0.300 Sum_probs=128.8
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCC--CCCccccCCCCCceEEcccccccCchhhh-hcCCccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTS--QLPSDLASCSNLRNLYLQGNHFSGEVPLF-LVGLHHL 144 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 144 (663)
...++.|+|++|.+++.+|. .++++++|+.|+|++|+|++ .+|..+.++++|++|+|++|.+++.+|.. +..+++|
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred CCcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 36799999999999988886 57999999999999999997 56778999999999999999999867764 8899999
Q ss_pred cccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc-cccCCCCCc
Q 006055 145 VRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR-FQTFGSNSF 218 (663)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~~~~~~ 218 (663)
+.|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. |..++.+..
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 472 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQK 472 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccE
Confidence 9999999999988887775 79999999999999 88887779999999999999999 56654 766666544
No 340
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=2.7e-16 Score=146.66 Aligned_cols=127 Identities=21% Similarity=0.161 Sum_probs=111.6
Q ss_pred CCCCCCCEEEccCCCCC-CCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccc
Q 006055 91 GNLTSLRTLSLRFNSLT-SQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLK 169 (663)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 169 (663)
...++|+.|+|++|.|+ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 77899999999999999999999965 7899999999999999999987888888899999
Q ss_pred ccccccccccCcC-CCCCCCCCCCCEEEeecCcCCCCCC---cccccCCCCCcc
Q 006055 170 TLFLENNRLSGSI-PGFDDVLPNLQQLNVSNNLLNGSIP---KRFQTFGSNSFL 219 (663)
Q Consensus 170 ~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~~~~~~~~ 219 (663)
+|+|++|+|++.. +..+..+++|+.|++++|++++..+ ..+..++.+...
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 9999999999643 2778999999999999999996655 467777766553
No 341
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=5.3e-16 Score=148.12 Aligned_cols=120 Identities=27% Similarity=0.327 Sum_probs=110.2
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQG 127 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (663)
|.|..+.|+. ..++.|+|++|+++ .+|. .|.++++|+.|+|++|.|++..|..|.++++|++|+|++
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 6788888853 36899999999998 8985 789999999999999999998888999999999999999
Q ss_pred ccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccC
Q 006055 128 NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG 180 (663)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 180 (663)
|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999888899999999999999999996666679999999999999999974
No 342
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.62 E-value=8e-16 Score=172.20 Aligned_cols=155 Identities=27% Similarity=0.316 Sum_probs=131.0
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCC--CCccccCCCCCceEEcccccccCchhh-hhcCCccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQ--LPSDLASCSNLRNLYLQGNHFSGEVPL-FLVGLHHL 144 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L 144 (663)
..+++.|+|++|.+++.+|. .++++++|+.|+|++|+|++. +|..|.++++|++|+|++|++++.+|. .+..+++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 36899999999999987886 579999999999999999973 356799999999999999999985665 58899999
Q ss_pred cccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcc-cccCCCCCccCCcC
Q 006055 145 VRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKR-FQTFGSNSFLGNSL 223 (663)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~~~~~~~~~~l 223 (663)
+.|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. |..++.+... .+
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L--~l 504 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYI--WL 504 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCE--EC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEE--Ee
Confidence 9999999999988887765 79999999999999 77877779999999999999999 56655 7777666542 23
Q ss_pred CCCCCC
Q 006055 224 CGKPLQ 229 (663)
Q Consensus 224 ~~~p~~ 229 (663)
.++|+.
T Consensus 505 ~~N~~~ 510 (562)
T 3a79_B 505 HDNPWD 510 (562)
T ss_dssp CSCCBC
T ss_pred cCCCcC
Confidence 444443
No 343
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1e-16 Score=175.84 Aligned_cols=142 Identities=21% Similarity=0.073 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhc-CCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLV-GLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L 147 (663)
..++.|+|++|.+++..+ ..+++|+.|+|++|.|++..|..|+++++|+.|+|++|.|++.+|..+. .+++|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 568888888888885433 3568999999999999998899999999999999999999998888886 79999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
+|++|.|++..+ +..+++|++|+|++|+|++.+| .+..+++|+.|+|++|+|++ +|..+..++.+..
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~ 241 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH 241 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCE
Confidence 999999996633 4469999999999999996545 48899999999999999995 7777776665543
No 344
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1e-16 Score=146.37 Aligned_cols=126 Identities=18% Similarity=0.159 Sum_probs=111.9
Q ss_pred CCCCCCCEEEccCCCCC-CCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccc
Q 006055 91 GNLTSLRTLSLRFNSLT-SQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLK 169 (663)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 169 (663)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+.++++|+
T Consensus 14 ~~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CCGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC
Confidence 34588999999999998 78999999999999999999999976 7899999999999999999987888888899999
Q ss_pred ccccccccccCc-CCCCCCCCCCCCEEEeecCcCCCCCC---cccccCCCCCc
Q 006055 170 TLFLENNRLSGS-IPGFDDVLPNLQQLNVSNNLLNGSIP---KRFQTFGSNSF 218 (663)
Q Consensus 170 ~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~~~~~~~ 218 (663)
+|+|++|++++. .+..+..+++|+.|++++|++++..+ ..+..++.+..
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 999999999974 45789999999999999999997766 46777776654
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.61 E-value=8e-16 Score=161.43 Aligned_cols=167 Identities=17% Similarity=0.194 Sum_probs=119.3
Q ss_pred CccceeEecC-----------CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCce-EEc
Q 006055 59 CKWAGVECEQ-----------NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP-SDLASCSNLRN-LYL 125 (663)
Q Consensus 59 c~w~gv~c~~-----------~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 125 (663)
|.|..|.|+. .+++.|+|++|+|+ .||+++|.++++|++|+|++|++.+.+| ..|.++++|++ +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 7899999963 36889999999999 8998889999999999999999977665 46788888765 667
Q ss_pred ccccccCchhhhhcCCccccccccccccccccCCCCC-------------------------ccc-cccccccccccccc
Q 006055 126 QGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGF-------------------------KNL-TKLKTLFLENNRLS 179 (663)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-------------------------~~l-~~L~~L~l~~N~l~ 179 (663)
+.|++++..|..|..+++|+.|++++|+|++..+..+ ..+ ..|+.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 7788987778888899999999999988874333222 222 24667788888887
Q ss_pred CcCCCCCCCCCCCCEEEeec-CcCCCCCC-cccccCCCCC---ccCCcCCCCCC
Q 006055 180 GSIPGFDDVLPNLQQLNVSN-NLLNGSIP-KRFQTFGSNS---FLGNSLCGKPL 228 (663)
Q Consensus 180 ~~~p~~~~~l~~L~~L~l~~-N~l~g~~p-~~~~~~~~~~---~~~~~l~~~p~ 228 (663)
.+|.......+|+.|++++ |.++ .+| ..|..++.+. +.+|.+...|.
T Consensus 168 -~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 168 -EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp -EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred -CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccCh
Confidence 3444333456677777764 4444 444 3455444433 35566655543
No 346
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.61 E-value=7.8e-16 Score=157.09 Aligned_cols=146 Identities=32% Similarity=0.363 Sum_probs=104.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|++++ +++ +.++++|+.|+|++|.|++ +| .+.++++|++|+|++|++++. ..+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEE
Confidence 567888888888874 443 6788888888888888876 33 377888888888888888753 3577788888888
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
|++|++++. ..+..+++|++|+|++|+|++..| +..+++|+.|+|++|++++ +|. +..++.+.. .+|.+..
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccC
Confidence 888888754 567788888888888888876555 7778888888888888875 342 555555443 4455544
Q ss_pred CC
Q 006055 226 KP 227 (663)
Q Consensus 226 ~p 227 (663)
.|
T Consensus 215 ~~ 216 (291)
T 1h6t_A 215 KP 216 (291)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.61 E-value=6.9e-16 Score=158.89 Aligned_cols=147 Identities=24% Similarity=0.348 Sum_probs=117.6
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|+++ .++. +..+++|+.|+|++|.|++ +| .+.++++|++|+|++|++++ +|. +..+++|+.|
T Consensus 62 l~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L 134 (308)
T 1h6u_A 62 LNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVL 134 (308)
T ss_dssp CTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEE
T ss_pred cCCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEE
Confidence 467999999999998 5654 7899999999999999987 34 68899999999999999986 443 8899999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC---CccCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN---SFLGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~---~~~~~~l~ 224 (663)
+|++|++++..+ +.++++|++|+|++|++++..+ +..+++|+.|+|++|++++..| +..++.+ .+.+|.+.
T Consensus 135 ~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 135 YLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC
Confidence 999999986544 8889999999999999986544 7889999999999999986544 4544444 34566665
Q ss_pred CCC
Q 006055 225 GKP 227 (663)
Q Consensus 225 ~~p 227 (663)
+.+
T Consensus 209 ~~~ 211 (308)
T 1h6u_A 209 DVS 211 (308)
T ss_dssp BCG
T ss_pred ccc
Confidence 543
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.61 E-value=1.5e-15 Score=156.45 Aligned_cols=145 Identities=24% Similarity=0.379 Sum_probs=98.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|++++|+++ .+|. +..+++|+.|+|++|.+++..+ +.++++|++|+|++|.+++ +| .+..+++|+.|+
T Consensus 41 ~~L~~L~l~~~~i~-~l~~--~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 41 DGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred CCcCEEEeeCCCcc-Cchh--hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 46777777777776 5653 5777777777777777776433 7777777777777777774 33 577777777777
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l~~ 225 (663)
|++|++++. |. +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..++.+. +.+|.+.+
T Consensus 114 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 777777753 32 7777777777777777775444 6677777777777777775333 44444433 34555544
Q ss_pred C
Q 006055 226 K 226 (663)
Q Consensus 226 ~ 226 (663)
.
T Consensus 188 ~ 188 (308)
T 1h6u_A 188 I 188 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 349
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.60 E-value=7.1e-16 Score=172.01 Aligned_cols=156 Identities=27% Similarity=0.316 Sum_probs=135.0
Q ss_pred eEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcc
Q 006055 64 VECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHH 143 (663)
Q Consensus 64 v~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (663)
..|....+ .++++++++ .+|.++ .++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~---~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGL---TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCC---CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCCce--EECCCCccc-cccccC---CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 35766665 799999999 899854 389999999999999988999999999999999999999988899999999
Q ss_pred ccccccccccccccCCCCCcccccccccccccccccC-cCCCCCCCCCCCCEEEeecCcCCCCCC-cccccCCCCCc---
Q 006055 144 LVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNNLLNGSIP-KRFQTFGSNSF--- 218 (663)
Q Consensus 144 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~~~~~~~--- 218 (663)
|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..+..+++|++|++++|++.+.+| ..|..++.+..
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 9999999999998777779999999999999999997 467889999999999999999666665 56777766554
Q ss_pred cCCcCCC
Q 006055 219 LGNSLCG 225 (663)
Q Consensus 219 ~~~~l~~ 225 (663)
.+|.+.+
T Consensus 156 ~~n~l~~ 162 (549)
T 2z81_A 156 KALSLRN 162 (549)
T ss_dssp EETTCCE
T ss_pred cCCcccc
Confidence 4555544
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.60 E-value=1.5e-15 Score=155.01 Aligned_cols=144 Identities=24% Similarity=0.348 Sum_probs=123.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|++++|++. .+|. +..+++|+.|+|++|+|++..| +.++++|++|+|++|.+++ +|. +..+++|+.|+
T Consensus 46 ~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEE
T ss_pred CcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEE
Confidence 57999999999998 6664 7899999999999999998544 9999999999999999995 444 89999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
|++|++++. +.+.++++|++|+|++|++++. ..+..+++|+.|+|++|++++..| +..++.+.. .+|.+.+
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999964 5689999999999999999965 568899999999999999997655 666665544 4555544
No 351
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=2.2e-15 Score=157.00 Aligned_cols=134 Identities=14% Similarity=0.077 Sum_probs=96.3
Q ss_pred hcccccccceEEEEEEecCCcEEEEEEecCccc---------------CHHH--------HHHHHHHhhcCCCCCcccce
Q 006055 375 AEVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTI---------------SERE--------FKDKIEGVGAVNHENLVPLR 431 (663)
Q Consensus 375 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------------~~~~--------~~~e~~~l~~l~h~niv~l~ 431 (663)
...||+|++|.||+|...+|+.||||+++.... .... ..+|...+.++.+..+.-..
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 568999999999999988999999998753210 0111 23455556666444332211
Q ss_pred EEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCCCEEEcCCCc-
Q 006055 432 AYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSSNILLTKSYE- 510 (663)
Q Consensus 432 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~Nill~~~~~- 510 (663)
.+. ....++||||+++++|.++... .....++.|++.+|.|||+.| ||||||||.|||+++++.
T Consensus 180 -p~~-~~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 180 -PIA-QSRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp -EEE-EETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEEECS
T ss_pred -eee-ccCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCCCCc
Confidence 111 1245899999999888765431 123467889999999999998 999999999999988773
Q ss_pred ---------eEEeccccccccC
Q 006055 511 ---------ARVSDFGLAHLVG 523 (663)
Q Consensus 511 ---------~kl~Dfg~a~~~~ 523 (663)
+.|+||+-+....
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEETT
T ss_pred ccccccccceEEEEeCCcccCC
Confidence 8999999776543
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.60 E-value=4.6e-17 Score=186.87 Aligned_cols=143 Identities=24% Similarity=0.241 Sum_probs=124.8
Q ss_pred cCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccc
Q 006055 67 EQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVR 146 (663)
Q Consensus 67 ~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 146 (663)
....++.|+|++|.+. .+|.++ .++++|+.|+|++|.|+ .+|..|.+|++|++|+|++|.|+ .+|..|++|++|++
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~-~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 297 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANI-FKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKY 297 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGG-GGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSE
T ss_pred cCCCCcEEECCCCCCC-CCChhh-cCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCE
Confidence 3468999999999998 899865 58999999999999999 68999999999999999999999 78999999999999
Q ss_pred cccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCC-CCEEEeecCcCCCCCCcccccCC
Q 006055 147 LNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPN-LQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..+..+.
T Consensus 298 L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp EECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred EECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 999999998 88999999999999999999999999987755432 23478999999999998776553
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.60 E-value=1e-16 Score=165.81 Aligned_cols=142 Identities=20% Similarity=0.101 Sum_probs=107.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhc-CCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLV-GLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L 147 (663)
..++.|+|++|++++ ++. ..+++|+.|+|++|+|++..|..+..+++|++|+|++|.+++..|..+. .+++|+.|
T Consensus 99 ~~L~~L~l~~n~l~~-~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISR-VSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSE-EEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCC-cCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 467777777777774 332 3467888899999988887777888888899999999888877777664 68888888
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF 218 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~ 218 (663)
+|++|+|++. |. ...+++|++|+|++|+|++ +|..+..+++|+.|+|++|+++ .+|..+..++.+..
T Consensus 175 ~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 175 NLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp ECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred ECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 8888888854 33 3357888888888888884 4445778888888888888888 46766666555543
No 354
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.60 E-value=9.3e-16 Score=154.07 Aligned_cols=144 Identities=19% Similarity=0.280 Sum_probs=108.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+| .++.+++|+.|+|++|+|++..| +.++++|++|+|++|++++ +|... . ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 56888888888887 677 36888888888998888887444 8888888888888888885 44432 3 8888888
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
|++|+|++. + .+.++++|+.|+|++|+|++. | .+..+++|+.|+|++|++++. ..+..++.+.. .+|.+++
T Consensus 113 L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 113 LDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred ccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 888888853 3 588888888888888888854 3 577888888888888888865 44555555443 4555544
Q ss_pred C
Q 006055 226 K 226 (663)
Q Consensus 226 ~ 226 (663)
.
T Consensus 187 ~ 187 (263)
T 1xeu_A 187 E 187 (263)
T ss_dssp C
T ss_pred C
Confidence 3
No 355
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=4.4e-16 Score=146.44 Aligned_cols=129 Identities=18% Similarity=0.215 Sum_probs=107.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .+|. +....++|+.|+|++|.|++. ..|.++++|++|+|++|+|++..|..|..+++|+.|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 57899999999998 6664 333344999999999999875 6789999999999999999966556668999999999
Q ss_pred cccccccccCCC--CCcccccccccccccccccCcCCCC----CCCCCCCCEEEeecCcCC
Q 006055 149 LATNNFSGEIPS--GFKNLTKLKTLFLENNRLSGSIPGF----DDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 149 l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 203 (663)
|++|+|+ .+|. .+.++++|+.|+|++|+++ .+|.. +..+++|+.|++++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999996 5665 7889999999999999998 56664 888999999999999875
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.60 E-value=1.8e-15 Score=169.48 Aligned_cols=150 Identities=31% Similarity=0.367 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|+|++ +|+ +..+++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++ +| .+..|++|+.|
T Consensus 64 l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 136 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESL 136 (605)
T ss_dssp CTTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEE
T ss_pred CCCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEE
Confidence 4689999999999995 554 7899999999999999987 44 79999999999999999996 43 58899999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l~ 224 (663)
+|++|+|++. ..|..|++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. | .+..++.|. +.+|.++
T Consensus 137 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 137 YLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEE
T ss_pred ECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCc
Confidence 9999999965 678999999999999999998777 88999999999999999964 4 455555544 4677777
Q ss_pred CCCCCC
Q 006055 225 GKPLQD 230 (663)
Q Consensus 225 ~~p~~~ 230 (663)
+.|...
T Consensus 211 ~~p~~~ 216 (605)
T 1m9s_A 211 NKPINH 216 (605)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 766553
No 357
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=2.6e-15 Score=140.27 Aligned_cols=103 Identities=26% Similarity=0.339 Sum_probs=56.0
Q ss_pred EEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccc
Q 006055 73 MLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATN 152 (663)
Q Consensus 73 ~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (663)
.|++++|+|+ .+|.++ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4566666666 566533 266666666666666655666666666666666666666544444455555555555555
Q ss_pred cccccCCCCCccccccccccccccccc
Q 006055 153 NFSGEIPSGFKNLTKLKTLFLENNRLS 179 (663)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 179 (663)
+|++..+..|.++++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 554333333444444444444444333
No 358
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=3.2e-15 Score=140.58 Aligned_cols=114 Identities=29% Similarity=0.363 Sum_probs=103.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.|+|++|+++ .+|...|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 28 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 57999999999999 67767789999999999999999987777789999999999999999988888899999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIP 183 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 183 (663)
|++|+|++..+..|.++++|++|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999996666667899999999999999997665
No 359
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.57 E-value=1.5e-15 Score=156.95 Aligned_cols=148 Identities=20% Similarity=0.147 Sum_probs=121.6
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|.++ .+| ..++|+.|+|++|.|++..+.. +++|++|+|++|++++..|..+..+++|+.|
T Consensus 79 l~~L~~L~Ls~n~l~-~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 149 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQ-ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149 (317)
T ss_dssp CTTCCEEECCSSEEE-EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEE
T ss_pred cCCCCEEECcCCccc-ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEE
Confidence 468999999999998 444 3389999999999999865543 6789999999999998888899999999999
Q ss_pred ccccccccccCCCCC-cccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcC
Q 006055 148 NLATNNFSGEIPSGF-KNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSL 223 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l 223 (663)
+|++|++++..|..+ ..+++|++|+|++|+|++. |.. ..+++|+.|+|++|++++. |..+..++.+.. .+|.+
T Consensus 150 ~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l 226 (317)
T 3o53_A 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQ-VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKL 226 (317)
T ss_dssp ECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECC-CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCC
T ss_pred ECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccc-cccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcc
Confidence 999999998777777 4789999999999999965 433 3589999999999999954 555766665544 56666
Q ss_pred CCCC
Q 006055 224 CGKP 227 (663)
Q Consensus 224 ~~~p 227 (663)
...|
T Consensus 227 ~~l~ 230 (317)
T 3o53_A 227 VLIE 230 (317)
T ss_dssp CEEC
T ss_pred cchh
Confidence 5433
No 360
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=8.7e-18 Score=161.38 Aligned_cols=146 Identities=23% Similarity=0.309 Sum_probs=123.6
Q ss_pred CcEEEEEcCCCCcccccCc-----cccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcc
Q 006055 69 NRVTMLRLPGVALSGQIPL-----GILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHH 143 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~-----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (663)
.+++.++|+.+.++|.+|. ..++.+++|+.|+|++|.|++ +| .+.++++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4566777777777777774 247899999999999999998 67 8999999999999999999 68888888999
Q ss_pred ccccccccccccccCCCCCcccccccccccccccccCcCC-CCCCCCCCCCEEEeecCcCCCCCCcc----------ccc
Q 006055 144 LVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIP-GFDDVLPNLQQLNVSNNLLNGSIPKR----------FQT 212 (663)
Q Consensus 144 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~----------~~~ 212 (663)
|+.|+|++|++++ +| .+.++++|++|+|++|+|++..+ ..+..+++|++|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999996 55 68999999999999999995433 46889999999999999999877753 666
Q ss_pred CCCCCcc
Q 006055 213 FGSNSFL 219 (663)
Q Consensus 213 ~~~~~~~ 219 (663)
++.+...
T Consensus 173 l~~L~~L 179 (198)
T 1ds9_A 173 LPNLKKL 179 (198)
T ss_dssp CSSCSEE
T ss_pred CCCcEEE
Confidence 6666553
No 361
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.56 E-value=6.2e-15 Score=138.16 Aligned_cols=104 Identities=27% Similarity=0.402 Sum_probs=59.6
Q ss_pred EEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccccc
Q 006055 72 TMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLAT 151 (663)
Q Consensus 72 ~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 151 (663)
+.+++++|+|+ .+|.++ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 46777777775 677643 26677777777777766666666666666666666666654444445555555555555
Q ss_pred ccccccCCCCCccccccccccccccccc
Q 006055 152 NNFSGEIPSGFKNLTKLKTLFLENNRLS 179 (663)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 179 (663)
|+|++..+..|.++++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 5555333323444444444444444443
No 362
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=7.3e-15 Score=137.16 Aligned_cols=109 Identities=28% Similarity=0.320 Sum_probs=99.9
Q ss_pred CCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccccccccc
Q 006055 96 LRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLEN 175 (663)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 175 (663)
.+.|++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4789999999987 777664 8999999999999998899999999999999999999977777789999999999999
Q ss_pred ccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 176 NRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99998878889999999999999999997654
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=3.7e-15 Score=165.91 Aligned_cols=107 Identities=31% Similarity=0.328 Sum_probs=59.2
Q ss_pred CCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccccccccc
Q 006055 96 LRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLEN 175 (663)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 175 (663)
|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|++|++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5555555555554 343 555555555555555555 455555555555555555555553 44 455555555555555
Q ss_pred ccccCcC-CCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 176 NRLSGSI-PGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 176 N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
|+|++.+ |..+..+++|+.|+|++|+|++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 5555444 5555555555555555555554433
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.54 E-value=4.9e-15 Score=165.89 Aligned_cols=145 Identities=24% Similarity=0.364 Sum_probs=124.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+|+.|+|++|.+. .+|. ++.+++|+.|+|++|+|++..| +.+|++|+.|+|++|.|++ +| .+..+++|+.|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 57899999999998 6774 7999999999999999998555 9999999999999999995 44 689999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l~~ 225 (663)
|++|+|++ + +.+.+|++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..| +..++.|. +.+|.+.+
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 99999996 3 4699999999999999999965 568899999999999999998766 66665554 45666655
Q ss_pred C
Q 006055 226 K 226 (663)
Q Consensus 226 ~ 226 (663)
.
T Consensus 190 l 190 (605)
T 1m9s_A 190 L 190 (605)
T ss_dssp C
T ss_pred C
Confidence 3
No 365
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.54 E-value=8.5e-15 Score=159.88 Aligned_cols=126 Identities=33% Similarity=0.425 Sum_probs=80.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+++ .++ .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~-~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLK-DIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCC-CCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcc-cch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 45777777777776 343 35667777777777777766433 6666777777777777665443 56666666666
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 66666665433 5666666666666666665554 45666666666666666643
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.54 E-value=1.1e-14 Score=146.27 Aligned_cols=126 Identities=24% Similarity=0.311 Sum_probs=111.4
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|+++ .+|+ +.++++|+.|+|++|+|++ +|. +.. ++|+.|+|++|++++ +| .+..+++|+.|
T Consensus 62 l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L 133 (263)
T 1xeu_A 62 FTNLKELHLSHNQIS-DLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEIL 133 (263)
T ss_dssp CTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEE
T ss_pred CCCCCEEECCCCccC-CChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEE
Confidence 368999999999999 5665 7999999999999999998 454 333 999999999999996 44 58999999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
+|++|+|++. | .+..+++|++|+|++|+|++. ..+..+++|+.|++++|++++.
T Consensus 134 ~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 134 SIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 9999999964 4 699999999999999999976 6688999999999999999966
No 367
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.1e-14 Score=136.55 Aligned_cols=107 Identities=23% Similarity=0.301 Sum_probs=97.2
Q ss_pred CEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccc
Q 006055 97 RTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENN 176 (663)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 176 (663)
+.+++++|+|+. +|..+. ++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 689999999975 787765 89999999999999988999999999999999999999766666899999999999999
Q ss_pred cccCcCCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 177 RLSGSIPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
+|++..+..|..+++|+.|+|++|+|....
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999777777999999999999999998543
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.53 E-value=1.5e-14 Score=160.38 Aligned_cols=136 Identities=29% Similarity=0.351 Sum_probs=106.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+|+ .+| +.+++|+.|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 56899999999998 788 347899999999999988 777 665 89999999999986 666 678899999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccc-cC-------CCCCccC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQ-TF-------GSNSFLG 220 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~~-------~~~~~~~ 220 (663)
|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |. ++ ..+.+.+
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRE 216 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCS
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCC
Confidence 99999985 666 57889999999999986 666 55 88999999999988 6666 43 33 3344455
Q ss_pred CcCCCCC
Q 006055 221 NSLCGKP 227 (663)
Q Consensus 221 ~~l~~~p 227 (663)
|.+...|
T Consensus 217 N~l~~lp 223 (571)
T 3cvr_A 217 NRITHIP 223 (571)
T ss_dssp SCCCCCC
T ss_pred CcceecC
Confidence 6555443
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.53 E-value=6.3e-15 Score=154.29 Aligned_cols=146 Identities=27% Similarity=0.319 Sum_probs=102.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.+. .++. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+
T Consensus 177 ~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEEccCCccc-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEE
Confidence 56888888888887 4553 5777888888888887776443 7777788888888887775444 77777778888
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCc---cCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSF---LGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~---~~~~l~~ 225 (663)
|++|++++. +.+..+++|++|+|++|++++. | .+..+++|+.|++++|++++..|..|..++.+.. .+|.+.+
T Consensus 250 l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 250 IGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCCCccCCC--hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 887777743 3577777777777777777753 2 4667777777777777777776666665555443 4454444
No 370
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.51 E-value=1.1e-14 Score=163.42 Aligned_cols=153 Identities=27% Similarity=0.412 Sum_probs=111.0
Q ss_pred CcCCCCCCCccceeE--------ecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCce
Q 006055 51 WNVYEASPCKWAGVE--------CEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRN 122 (663)
Q Consensus 51 w~~~~~~~c~w~gv~--------c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 122 (663)
|.. ..+||.|.|.. |...+++.|++++|+|+ .+|..+. ++|+.|+|++|+|+. +|. .+++|++
T Consensus 15 W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~~-lp~---~l~~L~~ 85 (622)
T 3g06_A 15 WRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRT 85 (622)
T ss_dssp HHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCSC-CCC---CCTTCCE
T ss_pred HHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCCC-CCC---cCCCCCE
Confidence 543 34588997653 33457899999999998 8987543 899999999999986 665 5789999
Q ss_pred EEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcC
Q 006055 123 LYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLL 202 (663)
Q Consensus 123 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 202 (663)
|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+|++|++
T Consensus 86 L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 86 LEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQL 153 (622)
T ss_dssp EEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcC
Confidence 999999998 4665 67889999999999884 555 45778888888888874 5543 47777788888777
Q ss_pred CCCCCcccccCCCCCccCCcCCC
Q 006055 203 NGSIPKRFQTFGSNSFLGNSLCG 225 (663)
Q Consensus 203 ~g~~p~~~~~~~~~~~~~~~l~~ 225 (663)
++ +|..+.++..+.+.+|.+.+
T Consensus 154 ~~-l~~~~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 154 AS-LPALPSELCKLWAYNNQLTS 175 (622)
T ss_dssp SC-CCCCCTTCCEEECCSSCCSC
T ss_pred CC-cCCccCCCCEEECCCCCCCC
Confidence 74 45445555544444444443
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.51 E-value=6e-14 Score=152.40 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=110.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|++++ +| ++.+++|+.|+|++|+|++. | ++++++|++|+|++|+..+.+ .+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 579999999999985 65 68999999999999999883 3 888888888888888666666 377888888888
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCC---CccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSN---SFLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~---~~~~~~l~~ 225 (663)
|++|++++ +| +..+++|+.|++++|+|++. + +..+++|+.|++++|++++ +| +..++.+ .+.+|.+.+
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 88888885 45 77888888888888888854 3 6778888888888888886 45 4444443 346667776
Q ss_pred CCCCC
Q 006055 226 KPLQD 230 (663)
Q Consensus 226 ~p~~~ 230 (663)
.|...
T Consensus 248 ~~~~~ 252 (457)
T 3bz5_A 248 LDVST 252 (457)
T ss_dssp CCCTT
T ss_pred cCHHH
Confidence 65443
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.51 E-value=5.1e-14 Score=152.84 Aligned_cols=120 Identities=23% Similarity=0.380 Sum_probs=66.9
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
+++.|+|++|+++ .+|. ..++|++|+|++|++++ +| .|+++++|++|+|++|++++ +|..+ .+|++|++
T Consensus 112 ~L~~L~l~~n~l~-~l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 112 SLKSLLVDNNNLK-ALSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TCCEEECCSSCCS-CCCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCcEEECCCCccC-cccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 4555555555554 2332 11466666666666665 55 46666666666666666664 44322 35666666
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIP 207 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 207 (663)
++|++++ +| .++++++|++|++++|++++ +|... ++|+.|++++|+++ .+|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc
Confidence 6666664 44 46666666666666666653 33321 35555555555555 444
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.50 E-value=7.3e-14 Score=151.72 Aligned_cols=148 Identities=19% Similarity=0.124 Sum_probs=124.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.+++ +| ++++++|++|+|++|+|++ +| ++++++|++|+|++|++++. | ++.+++|+.|+
T Consensus 85 ~~L~~L~Ls~N~l~~-~~---~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~ 154 (457)
T 3bz5_A 85 TNLTYLACDSNKLTN-LD---VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELD 154 (457)
T ss_dssp TTCSEEECCSSCCSC-CC---CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEECcCCCCce-ee---cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEE
Confidence 689999999999995 54 7899999999999999998 45 99999999999999999974 4 88999999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcCCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSLCGKPL 228 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l~~~p~ 228 (663)
+++|+..+.+ .++.+++|++|+|++|+|++ +| +..+++|+.|++++|++++..-..+.++..+.+.+|.+.+.|+
T Consensus 155 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~ip~ 229 (457)
T 3bz5_A 155 CHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDV 229 (457)
T ss_dssp CTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCCC
T ss_pred CCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccccCc
Confidence 9999776676 48899999999999999996 56 7899999999999999997622223334444557788888775
Q ss_pred CCC
Q 006055 229 QDC 231 (663)
Q Consensus 229 ~~c 231 (663)
..|
T Consensus 230 ~~l 232 (457)
T 3bz5_A 230 TPL 232 (457)
T ss_dssp TTC
T ss_pred ccc
Confidence 443
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=1.4e-14 Score=161.09 Aligned_cols=133 Identities=26% Similarity=0.342 Sum_probs=92.0
Q ss_pred ccCCCCCCCEEE-ccCCCCCCCCCc------cccC--CCCCceEEcccccccCchhhhhcCCccccccccccccccccCC
Q 006055 89 ILGNLTSLRTLS-LRFNSLTSQLPS------DLAS--CSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIP 159 (663)
Q Consensus 89 ~~~~l~~L~~L~-L~~N~l~~~~p~------~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 159 (663)
.++++++|+.|+ ++.|.+.. ++. .+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|
T Consensus 404 ~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp 479 (567)
T 1dce_A 404 TLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALP 479 (567)
T ss_dssp HHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCC
T ss_pred HHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccc
Confidence 456677777777 45543321 110 0111 1257888888888885 565 788888888888888888 778
Q ss_pred CCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCC-CcccccCCCCCc---cCCcCCCCC
Q 006055 160 SGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI-PKRFQTFGSNSF---LGNSLCGKP 227 (663)
Q Consensus 160 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~~~~~~~---~~~~l~~~p 227 (663)
..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..|..++.+.. .+|.+++.|
T Consensus 480 ~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 480 PALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp GGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred hhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 888888888888888888885 56 6778888888888888888776 777776666543 556665544
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.49 E-value=4.5e-14 Score=154.11 Aligned_cols=146 Identities=33% Similarity=0.391 Sum_probs=119.7
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|.+++..| ++.+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..| +..+++|+.|
T Consensus 198 l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred CCCCCEEEecCCccccccc---ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 3679999999999986544 57899999999999999873 468899999999999999997665 8899999999
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCC---CCccCCcCC
Q 006055 148 NLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGS---NSFLGNSLC 224 (663)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~---~~~~~~~l~ 224 (663)
+|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| +..++. +.+.+|.+.
T Consensus 271 ~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 271 KLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccC
Confidence 999999986544 8899999999999999997655 7889999999999999998766 444444 444666666
Q ss_pred CC
Q 006055 225 GK 226 (663)
Q Consensus 225 ~~ 226 (663)
+.
T Consensus 345 ~~ 346 (466)
T 1o6v_A 345 DV 346 (466)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=1.2e-14 Score=136.43 Aligned_cols=124 Identities=19% Similarity=0.108 Sum_probs=104.8
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCC-CCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccc
Q 006055 90 LGNLTSLRTLSLRFNSLTSQLPSDLASCS-NLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKL 168 (663)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 168 (663)
+.++++|+.|+|++|+|+. +|. +..+. +|++|+|++|.|++. ..|..+++|+.|+|++|+|++..|..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 5789999999999999996 454 55555 999999999999965 678999999999999999996544445999999
Q ss_pred cccccccccccCcCCC--CCCCCCCCCEEEeecCcCCCCCCcc----cccCCCCCcc
Q 006055 169 KTLFLENNRLSGSIPG--FDDVLPNLQQLNVSNNLLNGSIPKR----FQTFGSNSFL 219 (663)
Q Consensus 169 ~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~----~~~~~~~~~~ 219 (663)
++|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..++.+...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 99999999997 5665 7889999999999999998 55654 6777766553
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.48 E-value=3.8e-14 Score=148.30 Aligned_cols=144 Identities=24% Similarity=0.346 Sum_probs=110.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|++++|.+. .++. +..+++|+.|+|++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|+
T Consensus 155 ~~L~~L~l~~~~~~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 155 TGLNYLTVTESKVK-DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp TTCCEEECCSSCCC-CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCcEEEecCCCcC-Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 57888999988887 4443 6788899999999998887433 8888899999999998886555 78888999999
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC---ccCCcCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS---FLGNSLCG 225 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~---~~~~~l~~ 225 (663)
|++|++++..+ +..+++|++|+|++|++++. +.+..+++|+.|++++|++++. | .+..++.+. +.+|.+.+
T Consensus 228 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEECcCCcCCC
Confidence 99998885443 88888999999999988853 3577888999999999988864 3 354444443 35555543
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.46 E-value=1.6e-13 Score=148.89 Aligned_cols=141 Identities=23% Similarity=0.234 Sum_probs=102.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|.+++ +|. .+++|+.|+|++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~----~~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPE----LPQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCC----CCTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-ccc----ccCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 567788888888875 664 23778888888888876 3322 1678888888888885 66 588888888888
Q ss_pred cccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCCccCCcCCCCC
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNSFLGNSLCGKP 227 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~l~~~p 227 (663)
+++|++++ +|..+ .+|++|+|++|++++ +| .+..+++|+.|++++|++++ +|....++..+.+.+|.+...|
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~~lp 231 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILEELP 231 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSSCC
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCCccc
Confidence 88888884 66544 478888888888885 56 47888888888888888885 5655556666666666655433
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.46 E-value=1.3e-15 Score=158.60 Aligned_cols=145 Identities=21% Similarity=0.245 Sum_probs=94.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCC-CCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQ-LPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
.+++.|+|++|.+.+..+. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|+.|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 4577777777777765554 35677777777777777654 66667777777777777777776677777777777777
Q ss_pred ccccc-ccccc-CCCCCcccccccccccccc-cccCc-CCCCCCCCC-CCCEEEeecC--cCC-CCCCcccccCCC
Q 006055 148 NLATN-NFSGE-IPSGFKNLTKLKTLFLENN-RLSGS-IPGFDDVLP-NLQQLNVSNN--LLN-GSIPKRFQTFGS 215 (663)
Q Consensus 148 ~l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-g~~p~~~~~~~~ 215 (663)
+|++| .+++. +|..+.++++|++|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.+|..+..++.
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~ 223 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC
Confidence 77777 56542 4555666777777777777 66643 455556666 6777777776 344 334444433333
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=6.5e-14 Score=146.60 Aligned_cols=108 Identities=25% Similarity=0.237 Sum_probs=86.0
Q ss_pred CccceeEecCCcEEEEEcCCC-CcccccCccccCCCCCCCEEEccC-CCCCCCCCccccCCCCCceEEcccccccCchhh
Q 006055 59 CKWAGVECEQNRVTMLRLPGV-ALSGQIPLGILGNLTSLRTLSLRF-NSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPL 136 (663)
Q Consensus 59 c~w~gv~c~~~~v~~L~L~~~-~l~g~~p~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 136 (663)
|.|..|.|. ++ +|+ .||. +..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++.+|.
T Consensus 8 C~~~~v~~~----------~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC----------SSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC----------CCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777777764 34 676 6886 78889999999986 999887778888999999999999999888888
Q ss_pred hhcCCccccccccccccccccCCCCCcccccccccccccccccC
Q 006055 137 FLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSG 180 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 180 (663)
.|.+|++|+.|+|++|+|++..+..|..++ |+.|+|++|.|..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 888888888888888888855555555555 7888888887763
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.44 E-value=1.3e-15 Score=158.65 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=66.1
Q ss_pred ccceeEecCCcEEEEEcCCCCcccccCccccCCC--CCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCc-hhh
Q 006055 60 KWAGVECEQNRVTMLRLPGVALSGQIPLGILGNL--TSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGE-VPL 136 (663)
Q Consensus 60 ~w~gv~c~~~~v~~L~L~~~~l~g~~p~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~ 136 (663)
.|.++.|+...++.|+|+++.+.+ ..+..+ ++|+.|+|++|.+++..+. +.++++|++|+|++|.+++. +|.
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~ 112 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHG 112 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHH
Confidence 455554444444455555544431 123333 4555555555555443332 33445555555555555433 444
Q ss_pred hhcCCccccccccccccccccCCCCCcccccccccccccc-cccC-cCCCCCCCCCCCCEEEeecC-cCC
Q 006055 137 FLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENN-RLSG-SIPGFDDVLPNLQQLNVSNN-LLN 203 (663)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~ 203 (663)
.+..+++|+.|+|++|++++..|..++++++|++|+|++| .+++ .+|..+..+++|++|+|++| .++
T Consensus 113 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 4555555555555555554444444444555555555555 3443 13333444555555555555 444
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=1.7e-13 Score=143.38 Aligned_cols=107 Identities=28% Similarity=0.271 Sum_probs=97.5
Q ss_pred CEEEccCC-CCCCCCCccccCCCCCceEEccc-ccccCchhhhhcCCccccccccccccccccCCCCCcccccccccccc
Q 006055 97 RTLSLRFN-SLTSQLPSDLASCSNLRNLYLQG-NHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLE 174 (663)
Q Consensus 97 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 174 (663)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 8987 788 99999999999996 99998888999999999999999999999889999999999999999
Q ss_pred cccccCcCCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 175 NNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
+|+|++..+..|..++ |+.|+|++|+|...-
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 9999977777777776 999999999998643
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.42 E-value=6.8e-15 Score=156.52 Aligned_cols=150 Identities=17% Similarity=0.252 Sum_probs=98.9
Q ss_pred CcEEEEEcCCC---CcccccCccc------cCCCCCCCEEEccCCCCCC----CCCccccCCCCCceEEcccccccCchh
Q 006055 69 NRVTMLRLPGV---ALSGQIPLGI------LGNLTSLRTLSLRFNSLTS----QLPSDLASCSNLRNLYLQGNHFSGEVP 135 (663)
Q Consensus 69 ~~v~~L~L~~~---~l~g~~p~~~------~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p 135 (663)
.+++.|+|++| +++|.+|.++ |..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 46777777774 4555566533 3677777777777777776 456667777777777777777764433
Q ss_pred hhhc----CC---------cccccccccccccc-ccCC---CCCccccccccccccccccc--C---cCCCCCCCCCCCC
Q 006055 136 LFLV----GL---------HHLVRLNLATNNFS-GEIP---SGFKNLTKLKTLFLENNRLS--G---SIPGFDDVLPNLQ 193 (663)
Q Consensus 136 ~~~~----~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~ 193 (663)
..+. .+ ++|+.|+|++|+++ +.+| ..+..+++|++|+|++|+|+ | .+|..+..+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3333 33 77777777777776 3344 35566777777777777776 3 3454667777788
Q ss_pred EEEeecCcCC----CCCCcccccCCCCCc
Q 006055 194 QLNVSNNLLN----GSIPKRFQTFGSNSF 218 (663)
Q Consensus 194 ~L~l~~N~l~----g~~p~~~~~~~~~~~ 218 (663)
.|+|++|+++ +.+|..+..++.+..
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 8888888775 456666655554443
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.40 E-value=4.2e-15 Score=158.12 Aligned_cols=136 Identities=22% Similarity=0.306 Sum_probs=104.2
Q ss_pred CcEEEEEcCCCCccc----ccCccccCCCCCCCEEEccCCCCCCCCCccc----cCC---------CCCceEEccccccc
Q 006055 69 NRVTMLRLPGVALSG----QIPLGILGNLTSLRTLSLRFNSLTSQLPSDL----ASC---------SNLRNLYLQGNHFS 131 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g----~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~L~~N~l~ 131 (663)
.+++.|+|++|.+++ .+|. .+.++++|++|+|++|.|++..+..+ ..+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 678888888888886 3664 46788888888888888864433333 333 78888888888887
Q ss_pred -Cchh---hhhcCCcccccccccccccc--c---cCCCCCccccccccccccccccc----CcCCCCCCCCCCCCEEEee
Q 006055 132 -GEVP---LFLVGLHHLVRLNLATNNFS--G---EIPSGFKNLTKLKTLFLENNRLS----GSIPGFDDVLPNLQQLNVS 198 (663)
Q Consensus 132 -~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~ 198 (663)
+.+| ..+..+++|+.|+|++|+|+ | .+|..+.++++|++|+|++|.|+ +.+|..+..+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 4555 46777888888888888887 3 45557888888888888888886 5677777888888888888
Q ss_pred cCcCCCC
Q 006055 199 NNLLNGS 205 (663)
Q Consensus 199 ~N~l~g~ 205 (663)
+|++++.
T Consensus 253 ~n~i~~~ 259 (386)
T 2ca6_A 253 DCLLSAR 259 (386)
T ss_dssp TCCCCHH
T ss_pred CCCCchh
Confidence 8888765
No 385
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=9.2e-13 Score=147.73 Aligned_cols=94 Identities=29% Similarity=0.369 Sum_probs=60.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+++ +|. .+++|+.|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~ 127 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLW 127 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEE
Confidence 46777888888777 6664 46777777777777775 554 56777777777777764 333 445666666
Q ss_pred cccccccccCCCCCccccccccccccccccc
Q 006055 149 LATNNFSGEIPSGFKNLTKLKTLFLENNRLS 179 (663)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 179 (663)
|++|+|++ +|.. +++|++|+|++|+|+
T Consensus 128 L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 128 IFGNQLTS-LPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred CCCCCCCc-CCCC---CCCCCEEECcCCcCC
Confidence 66666653 4443 255556666666555
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.38 E-value=1.1e-14 Score=153.46 Aligned_cols=139 Identities=29% Similarity=0.310 Sum_probs=87.9
Q ss_pred CcEEEEEcCCCCcccccCc----cccCCCC-CCCEEEccCCCCCCCCCccccCC-----CCCceEEcccccccCchhhhh
Q 006055 69 NRVTMLRLPGVALSGQIPL----GILGNLT-SLRTLSLRFNSLTSQLPSDLASC-----SNLRNLYLQGNHFSGEVPLFL 138 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~ 138 (663)
..++.|+|++|.++ .++. ..|..++ +|+.|+|++|.|++..+..|..+ ++|++|+|++|.+++..+..+
T Consensus 22 ~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 34777777777776 3443 3456666 77777777777776666666554 777777777777776665543
Q ss_pred cC----C-ccccccccccccccccCCCCCc----c-cccccccccccccccCcC----CCCCCCCC-CCCEEEeecCcCC
Q 006055 139 VG----L-HHLVRLNLATNNFSGEIPSGFK----N-LTKLKTLFLENNRLSGSI----PGFDDVLP-NLQQLNVSNNLLN 203 (663)
Q Consensus 139 ~~----l-~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~----p~~~~~l~-~L~~L~l~~N~l~ 203 (663)
.. + ++|+.|+|++|+|++..+..+. . .++|++|+|++|+|++.. +..+..++ +|+.|+|++|+++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 33 3 6777777777777655443332 2 247777777777776422 22333444 7777777777777
Q ss_pred CCCCc
Q 006055 204 GSIPK 208 (663)
Q Consensus 204 g~~p~ 208 (663)
+..+.
T Consensus 181 ~~~~~ 185 (362)
T 3goz_A 181 SKNCA 185 (362)
T ss_dssp GSCHH
T ss_pred hhhHH
Confidence 65553
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.38 E-value=9e-13 Score=138.11 Aligned_cols=144 Identities=14% Similarity=0.157 Sum_probs=116.5
Q ss_pred eEecCCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchh-hhhcCCc
Q 006055 64 VECEQNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVP-LFLVGLH 142 (663)
Q Consensus 64 v~c~~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 142 (663)
-.|+.. .++-++++|+ .||.++ .++|+.|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.+++
T Consensus 7 C~C~~~---~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSNR---VFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEETT---EEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeCC---EEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 357653 4677899999 899754 4789999999999998666789999999999999999977676 4678898
Q ss_pred cccc-cccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeec-CcCCCCCCcccccCC
Q 006055 143 HLVR-LNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSN-NLLNGSIPKRFQTFG 214 (663)
Q Consensus 143 ~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~~~ 214 (663)
+|+. +.+++|+|+...|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+..|..+.
T Consensus 80 ~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred hhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 8775 66778999988888999999999999999999977777777777888898876 566644445555543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.38 E-value=3.2e-15 Score=143.38 Aligned_cols=128 Identities=23% Similarity=0.275 Sum_probs=112.5
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccc
Q 006055 68 QNRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRL 147 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (663)
..+++.|+|++|++++ +| .+.++++|+.|+|++|.|+. +|..+..+++|++|+|++|++++ +| .+..+++|+.|
T Consensus 47 l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp TTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred CCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 4689999999999995 88 57999999999999999985 78888888999999999999996 66 68899999999
Q ss_pred ccccccccccCC-CCCcccccccccccccccccCcCCCC----------CCCCCCCCEEEeecCcCC
Q 006055 148 NLATNNFSGEIP-SGFKNLTKLKTLFLENNRLSGSIPGF----------DDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 148 ~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~----------~~~l~~L~~L~l~~N~l~ 203 (663)
+|++|++++..+ ..+..+++|++|+|++|++++.+|.. +..+++|+.|| +|.++
T Consensus 121 ~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 999999985332 47889999999999999999887764 78899999987 77776
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.36 E-value=3e-14 Score=150.09 Aligned_cols=151 Identities=21% Similarity=0.165 Sum_probs=119.7
Q ss_pred EEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCC----ccccCCC-CCceEEcccccccCchhhhhcCC-----c
Q 006055 73 MLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLP----SDLASCS-NLRNLYLQGNHFSGEVPLFLVGL-----H 142 (663)
Q Consensus 73 ~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~ 142 (663)
.++|+.|+++|.+|. .+...++|+.|+|++|.|++..+ ..|.+++ +|++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999998886 56777779999999999998766 6788898 99999999999998888887775 9
Q ss_pred cccccccccccccccCCCCCccc-----ccccccccccccccCcCCCC----CCC-CCCCCEEEeecCcCCCCCCccc--
Q 006055 143 HLVRLNLATNNFSGEIPSGFKNL-----TKLKTLFLENNRLSGSIPGF----DDV-LPNLQQLNVSNNLLNGSIPKRF-- 210 (663)
Q Consensus 143 ~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~----~~~-l~~L~~L~l~~N~l~g~~p~~~-- 210 (663)
+|++|+|++|++++..+..+... ++|++|+|++|+|++..+.. +.. .++|++|+|++|++++..+..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 99999999999997766655443 89999999999998765544 334 3699999999999996544332
Q ss_pred --c----cCCCCCccCCcCC
Q 006055 211 --Q----TFGSNSFLGNSLC 224 (663)
Q Consensus 211 --~----~~~~~~~~~~~l~ 224 (663)
. ++..+.+.+|.+.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGG
T ss_pred HHhcCCccccEeeecCCCCc
Confidence 2 3444444555543
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.23 E-value=1.2e-13 Score=150.42 Aligned_cols=157 Identities=22% Similarity=0.165 Sum_probs=117.5
Q ss_pred CCcEEEEEcCCCCcccc----cCccccCCCCCCCEEEccCCCCCCC----CCccccCCCCCceEEcccccccCchhhhhc
Q 006055 68 QNRVTMLRLPGVALSGQ----IPLGILGNLTSLRTLSLRFNSLTSQ----LPSDLASCSNLRNLYLQGNHFSGEVPLFLV 139 (663)
Q Consensus 68 ~~~v~~L~L~~~~l~g~----~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 139 (663)
..+++.|+|++|.+++. +.+..+..+++|+.|+|++|.|+.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 36799999999988753 2233455789999999999999864 577788899999999999999866555554
Q ss_pred C-----Ccccccccccccccccc----CCCCCcccccccccccccccccCcCCCCCC-----CCCCCCEEEeecCcCCC-
Q 006055 140 G-----LHHLVRLNLATNNFSGE----IPSGFKNLTKLKTLFLENNRLSGSIPGFDD-----VLPNLQQLNVSNNLLNG- 204 (663)
Q Consensus 140 ~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~g- 204 (663)
. .++|+.|+|++|.+++. +|..+..+++|++|+|++|++++..+..+. ..++|+.|+|++|++++
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~ 385 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 385 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChh
Confidence 3 36899999999998865 566677789999999999998865443332 26789999999999986
Q ss_pred ---CCCcccccCCCCC---ccCCcCC
Q 006055 205 ---SIPKRFQTFGSNS---FLGNSLC 224 (663)
Q Consensus 205 ---~~p~~~~~~~~~~---~~~~~l~ 224 (663)
.+|..+..++.+. +.+|.+.
T Consensus 386 ~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 386 SCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred hHHHHHHHHHhCCCccEEECCCCCCC
Confidence 6777665555544 3455544
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.21 E-value=1.4e-13 Score=149.89 Aligned_cols=155 Identities=20% Similarity=0.215 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCcccc----cCccccCCCCCCCEEEccCCCCCCCC-----CccccCCCCCceEEcccccccCc----hh
Q 006055 69 NRVTMLRLPGVALSGQ----IPLGILGNLTSLRTLSLRFNSLTSQL-----PSDLASCSNLRNLYLQGNHFSGE----VP 135 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~----~p~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p 135 (663)
.+++.|+|++|++++. ++. .+..+++|+.|+|++|.+++.. +..+..+++|++|+|++|.+++. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4899999999999853 554 5678999999999999987632 33344689999999999999964 78
Q ss_pred hhhcCCccccccccccccccccCCCCCcc-----cccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCCCCC
Q 006055 136 LFLVGLHHLVRLNLATNNFSGEIPSGFKN-----LTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLNGSI 206 (663)
Q Consensus 136 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~ 206 (663)
..+..+++|+.|+|++|++++..+..+.. .++|++|+|++|.+++. ++..+..+++|+.|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 88888999999999999997554444433 36999999999999865 5666778899999999999998765
Q ss_pred Ccccc--------cCCCCCccCCcCC
Q 006055 207 PKRFQ--------TFGSNSFLGNSLC 224 (663)
Q Consensus 207 p~~~~--------~~~~~~~~~~~l~ 224 (663)
+..+. ++..+.+.+|.+.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCC
Confidence 54332 4444555555554
No 392
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.16 E-value=4.4e-11 Score=124.03 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=39.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEE
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLY 124 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (663)
.+++.|+|++ +++ .|+..+|.++++|+.|+|++|.++...+..|.++.++..|.
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~ 154 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIP 154 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEEC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEec
Confidence 5788899988 887 88888899999999999999987654444444444333333
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=1.4e-10 Score=116.13 Aligned_cols=134 Identities=14% Similarity=0.024 Sum_probs=104.1
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
..++.|+.+.||++... ++.+++|+..... .....+.+|+++++.+. +..+.++++++.+....++||||+++.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 35777888999999855 7899999986531 22346888999998884 667788999998888899999999999998
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG------------------------------------------- 490 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~------------------------------------------- 490 (663)
+..... .....++.+++++|..||+..
T Consensus 99 ~~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 764211 123467888999999999810
Q ss_pred --------------CcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 491 --------------PNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 491 --------------~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 238999999999999876556799998774
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.10 E-value=4.3e-13 Score=133.17 Aligned_cols=158 Identities=18% Similarity=0.173 Sum_probs=106.6
Q ss_pred CCccceeEecCC--cEEEEEcCC---CCcccccCccccCCCCCCCEEEccCCCCCCCCCc-cccCCCCCce--EEccccc
Q 006055 58 PCKWAGVECEQN--RVTMLRLPG---VALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPS-DLASCSNLRN--LYLQGNH 129 (663)
Q Consensus 58 ~c~w~gv~c~~~--~v~~L~L~~---~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~--L~L~~N~ 129 (663)
.|.|.|+.|+.+ +|..+...+ ..+.|.++++.+..+.. .|...+|.-++.++- .|...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 588999999754 777776655 45556666544444333 344455555554432 2555566666 7788885
Q ss_pred cc---CchhhhhcCCccccccccccccccc--cCCCCCcccccccccccccccccCcCCCCCCCCC--CCCEEEeecCcC
Q 006055 130 FS---GEVPLFLVGLHHLVRLNLATNNFSG--EIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLP--NLQQLNVSNNLL 202 (663)
Q Consensus 130 l~---~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l 202 (663)
.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 43 3333334568899999999999987 5567777899999999999999864 2233344 899999999999
Q ss_pred CCCCCc-------ccccCCCCCcc
Q 006055 203 NGSIPK-------RFQTFGSNSFL 219 (663)
Q Consensus 203 ~g~~p~-------~~~~~~~~~~~ 219 (663)
++.+|. .+..++.+..+
T Consensus 233 ~~~~~~~~~y~~~il~~~P~L~~L 256 (267)
T 3rw6_A 233 CDTFRDQSTYISAIRERFPKLLRL 256 (267)
T ss_dssp GGGCSSHHHHHHHHHHHCTTCCEE
T ss_pred ccccCcchhHHHHHHHHCcccCeE
Confidence 987773 25566666554
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=2.1e-12 Score=135.98 Aligned_cols=134 Identities=20% Similarity=0.230 Sum_probs=55.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccc-----cCCCCCceEEcccccccC----chhhhhcC
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDL-----ASCSNLRNLYLQGNHFSG----EVPLFLVG 140 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~ 140 (663)
.++.|+|++|.++..-...+...+++|+.|+|++|.|+......+ ...++|++|+|++|.|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 455555555544322221122233444555555554443222222 123445555555555442 12333344
Q ss_pred Ccccccccccccccccc----CCCCCcccccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCC
Q 006055 141 LHHLVRLNLATNNFSGE----IPSGFKNLTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 141 l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+.. ++..+...++|++|+|++|+|+
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 44555555555554421 123333444455555555554421 1222223344555555555444
No 396
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=3.4e-10 Score=112.81 Aligned_cols=130 Identities=13% Similarity=0.064 Sum_probs=96.8
Q ss_pred ccc-cccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCC--cccceEEEEecCccEEEEEccCCCChh
Q 006055 377 VLG-KGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHEN--LVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 377 ~lg-~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.++ .|..+.||++...+|+.++||..... ....+..|+.+++.+.+.+ +.+++++....+..++||||+++.+|.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 56669999998777889999997654 2245778888888886545 445888877777789999999998884
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG------------------------------------------- 490 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~------------------------------------------- 490 (663)
... .+ ...++.++++.|..||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 2256677788888888642
Q ss_pred -------------CcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 491 -------------PNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 491 -------------~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 1299999999999998776677999998753
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.03 E-value=1.8e-10 Score=119.42 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=59.6
Q ss_pred CcEEEEEcCCCCcc----------c---------ccCccccCC--------CCCCCEEEccCCCCCCCCCccccCCCCCc
Q 006055 69 NRVTMLRLPGVALS----------G---------QIPLGILGN--------LTSLRTLSLRFNSLTSQLPSDLASCSNLR 121 (663)
Q Consensus 69 ~~v~~L~L~~~~l~----------g---------~~p~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (663)
.+++.|||++|++. + .||...|.+ +++|+.|+|++ +++.+-+..|.+|++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 56888888887776 1 577788888 99999999999 89887778899999999
Q ss_pred eEEcccccccCchhhhhcCCccccccc
Q 006055 122 NLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 122 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
.|+|++|.+....+..|.++.++..+.
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~ 154 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIP 154 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEEC
T ss_pred eEEcCCCCccccchhhhcCCCceEEec
Confidence 999999987644444444444444333
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.98 E-value=3.2e-12 Score=134.60 Aligned_cols=136 Identities=22% Similarity=0.195 Sum_probs=104.3
Q ss_pred CcEEEEEcCCCCcccccCccccC-----CCCCCCEEEccCCCCCCCCCccc-cCCCCCceEEcccccccCchhhhh----
Q 006055 69 NRVTMLRLPGVALSGQIPLGILG-----NLTSLRTLSLRFNSLTSQLPSDL-ASCSNLRNLYLQGNHFSGEVPLFL---- 138 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~---- 138 (663)
..++.|+|++|.++..-.. .+. +.++|+.|+|++|.|+......+ ..+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCT-VVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHH-HHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHH-HHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 5799999999999743221 222 33799999999999975433333 356789999999999986555444
Q ss_pred -cCCccccccccccccccc----cCCCCCcccccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCCCC
Q 006055 139 -VGLHHLVRLNLATNNFSG----EIPSGFKNLTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 139 -~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~ 205 (663)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+...++|+.|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 356889999999999974 2445557789999999999999742 355567788999999999999853
No 399
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=2e-09 Score=112.91 Aligned_cols=138 Identities=15% Similarity=0.179 Sum_probs=103.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEec--Ccc--cCHHHHHHHHHHhhcCCC--CCcccceEEEEec---CccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLK--DVT--ISEREFKDKIEGVGAVNH--ENLVPLRAYYYSM---DEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~ey 446 (663)
+.|+.|.++.||+.... +..+++|+.. ... .....+.+|..+++.+.+ ..+.+++.++.+. ...++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46899999999998876 4678888876 332 224568889999988864 4577888888765 347999999
Q ss_pred cCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-------------------------------------
Q 006055 447 LTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ------------------------------------- 489 (663)
Q Consensus 447 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~------------------------------------- 489 (663)
+++..+.+... ..++...+..++.++++.|..||+.
T Consensus 123 v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99977754211 2367888889999999999999973
Q ss_pred -------------------CCcceecCCCCCCEEEcCCCc--eEEeccccccc
Q 006055 490 -------------------GPNVSHGNIKSSNILLTKSYE--ARVSDFGLAHL 521 (663)
Q Consensus 490 -------------------~~~iiHrdlk~~Nill~~~~~--~kl~Dfg~a~~ 521 (663)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 134899999999999997753 68999998864
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.81 E-value=1.3e-10 Score=130.62 Aligned_cols=137 Identities=16% Similarity=0.196 Sum_probs=78.1
Q ss_pred CcEEEEEcC-----------CCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccC-CCCCceEEcc----cccccC
Q 006055 69 NRVTMLRLP-----------GVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLAS-CSNLRNLYLQ----GNHFSG 132 (663)
Q Consensus 69 ~~v~~L~L~-----------~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~ 132 (663)
.+++.|+|+ .+.+++.-...++..+++|+.|+|+.|.+++..+..+.. +++|+.|+|+ .|++++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 457777776 244543322223345667777777666666655555544 6667777774 556665
Q ss_pred c-----hhhhhcCCcccccccccc--ccccccCCCCCc-ccccccccccccccccC-cCCCCCCCCCCCCEEEeecCcCC
Q 006055 133 E-----VPLFLVGLHHLVRLNLAT--NNFSGEIPSGFK-NLTKLKTLFLENNRLSG-SIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 133 ~-----~p~~~~~l~~L~~L~l~~--N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
. ++..+.++++|+.|+|++ |.+++..+..++ .+++|++|+|++|++++ .++..+..+++|+.|+|++|+++
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3 444555666677777653 234443333333 25666666776666654 33444456666677777766665
Q ss_pred CC
Q 006055 204 GS 205 (663)
Q Consensus 204 g~ 205 (663)
+.
T Consensus 502 ~~ 503 (592)
T 3ogk_B 502 ER 503 (592)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.74 E-value=8.7e-10 Score=123.76 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=72.3
Q ss_pred EEEEEcCCCC-ccc-ccCccccCCCCCCCEEEccCCCCCCC----CCccccCCCCCceEEccccccc----CchhhhhcC
Q 006055 71 VTMLRLPGVA-LSG-QIPLGILGNLTSLRTLSLRFNSLTSQ----LPSDLASCSNLRNLYLQGNHFS----GEVPLFLVG 140 (663)
Q Consensus 71 v~~L~L~~~~-l~g-~~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~ 140 (663)
++.|+|++|. ++. .++ .++.++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 140 L~~L~L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLL-SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp CCEEEEESCEEEEHHHHH-HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHH-HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 7777776665 211 111 1234567777777777766554 2333455667777777777765 344555566
Q ss_pred CccccccccccccccccCCCCCccccccccccccccccc---CcCCCCCCCCCCCCEEEeecC
Q 006055 141 LHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLS---GSIPGFDDVLPNLQQLNVSNN 200 (663)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N 200 (663)
+++|+.|+|++|.+.+ +|..+.++++|++|+++++... +..+..+..+++|+.|+++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc
Confidence 6777777777776663 4555666666666666543222 222334455555555555554
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.1e-10 Score=115.72 Aligned_cols=117 Identities=21% Similarity=0.276 Sum_probs=82.4
Q ss_pred CCCcccccCccccCCCCCCCE--EEccCCCCC---CCCCccccCCCCCceEEcccccccC--chhhhhcCCccccccccc
Q 006055 78 GVALSGQIPLGILGNLTSLRT--LSLRFNSLT---SQLPSDLASCSNLRNLYLQGNHFSG--EVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 78 ~~~l~g~~p~~~~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~ 150 (663)
.|..++.++.+.|...+.|.. ++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|+
T Consensus 125 yn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls 204 (267)
T 3rw6_A 125 YDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLS 204 (267)
T ss_dssp EETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECT
T ss_pred cchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECC
Confidence 344444444444555666666 677777432 2222223567889999999999987 556777889999999999
Q ss_pred cccccccCCCCCcccc--cccccccccccccCcCCC-------CCCCCCCCCEEE
Q 006055 151 TNNFSGEIPSGFKNLT--KLKTLFLENNRLSGSIPG-------FDDVLPNLQQLN 196 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~-------~~~~l~~L~~L~ 196 (663)
+|+|++. ..+..+. +|++|+|++|.+++.+|+ .+..+|+|+.||
T Consensus 205 ~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 205 GNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999865 3455555 899999999999887763 367789998876
No 403
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.71 E-value=6e-09 Score=106.53 Aligned_cols=180 Identities=19% Similarity=0.200 Sum_probs=117.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCc--ccceEEEEecC---ccEEEEEccCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENL--VPLRAYYYSMD---EKLLVYDYLTM 449 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~~---~~~lv~ey~~~ 449 (663)
+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +..+ .+++.+....+ ..++||||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458899999999853 56889986533 23467889999998873 3332 33443332222 24789999999
Q ss_pred CChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 006055 450 GSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG--------------------------------------- 490 (663)
Q Consensus 450 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~--------------------------------------- 490 (663)
.++.+.... .++...+..++.++++.+..||+..
T Consensus 101 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 888653321 2566777778888888888888511
Q ss_pred -----------------CcceecCCCCCCEEEcC--CCceEEeccccccccCCCCC-----CC---CCc--------cc-
Q 006055 491 -----------------PNVSHGNIKSSNILLTK--SYEARVSDFGLAHLVGPSST-----PN---RVA--------GY- 534 (663)
Q Consensus 491 -----------------~~iiHrdlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~-----~~---~~~--------~y- 534 (663)
+.++|+|++|.||++++ ...+.|+||+.+..-.+... .. ... +|
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 24799999999999998 45678999999865433210 00 000 02
Q ss_pred -cC-ccccCCCCCCCcchhhhHHHHHHHHHhCCCCCc
Q 006055 535 -RA-PEVTDPCKVSQKADVYSFGVLLLELLTGKAPTH 569 (663)
Q Consensus 535 -~a-PE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~ 569 (663)
.. |+.... .....+.|+++.+++.+.+|..+|-
T Consensus 254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 111110 0112589999999999999988763
No 404
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.59 E-value=1.1e-07 Score=100.80 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=104.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccc
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLN 148 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (663)
..++.+.|+. +++ .|+...|.++++|+.|+|..| ++.+-...|.+ .+|+.+.| .|.++..-+..|.++++|+.++
T Consensus 203 ~~L~~l~lp~-~l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~ 277 (401)
T 4fdw_A 203 AGIEEVLLPV-TLK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVT 277 (401)
T ss_dssp CCCSEEECCT-TCC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEE
T ss_pred cccCEEEeCC-chh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEE
Confidence 4678888884 466 888888999999999999875 66655667777 78889988 4556655677888888999998
Q ss_pred ccccccc-----ccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccC
Q 006055 149 LATNNFS-----GEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTF 213 (663)
Q Consensus 149 l~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~ 213 (663)
+.+|.+. ..-+..|.+|++|+.++|. |.++..-...|.++++|+.|+|..| ++..-+.+|.++
T Consensus 278 l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 278 TYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp EESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred eCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 8888765 3445678888889998888 4477555678888888999988555 654445566665
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=4.1e-09 Score=99.34 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=81.6
Q ss_pred ccCCCCCCCEEEccCC-CCCCC----CCccccCCCCCceEEcccccccCc----hhhhhcCCcccccccccccccccc--
Q 006055 89 ILGNLTSLRTLSLRFN-SLTSQ----LPSDLASCSNLRNLYLQGNHFSGE----VPLFLVGLHHLVRLNLATNNFSGE-- 157 (663)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~-- 157 (663)
.+...++|+.|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4567788888888888 77532 334456667888888888888632 344556667888888888888742
Q ss_pred --CCCCCccccccccccc--ccccccCc----CCCCCCCCCCCCEEEeecCcCC
Q 006055 158 --IPSGFKNLTKLKTLFL--ENNRLSGS----IPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 158 --~p~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4556667778888888 77888642 3334555678999999988875
No 406
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.53 E-value=1.9e-09 Score=120.99 Aligned_cols=135 Identities=15% Similarity=0.090 Sum_probs=77.9
Q ss_pred CcEEEEEcC---------CCCcccccCccccCCCCCCCEEEccCCCCCCCCCcccc-CCCCCceEEcc--c----ccccC
Q 006055 69 NRVTMLRLP---------GVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLA-SCSNLRNLYLQ--G----NHFSG 132 (663)
Q Consensus 69 ~~v~~L~L~---------~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~ 132 (663)
.+++.|+|. .+.+++.....+...+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 457777772 23444322222223467777777777777654444443 46777777777 3 45542
Q ss_pred -----chhhhhcCCccccccccccccccccCCCCCcc-cccccccccccccccCcCCCCC-CCCCCCCEEEeecCcCCC
Q 006055 133 -----EVPLFLVGLHHLVRLNLATNNFSGEIPSGFKN-LTKLKTLFLENNRLSGSIPGFD-DVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 133 -----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~g 204 (663)
.++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|++++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 2333355667777777765 555444444443 6667777777777654433322 456777777777777754
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.51 E-value=2.6e-07 Score=98.00 Aligned_cols=126 Identities=16% Similarity=0.185 Sum_probs=66.5
Q ss_pred EEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccc
Q 006055 71 VTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLA 150 (663)
Q Consensus 71 v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (663)
++.+.|++ +++ .|+...|.++++|+.++|++|+++......|. +.+|+.+.|.+| ++..-..+|.++++|+.++|.
T Consensus 159 L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 159 VQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred ceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 44555543 444 45555555566666666665555543333443 455555555533 443444555566666666665
Q ss_pred cccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 151 TNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
.| ++..-...|.+ .+|+.+.| .|.++...+..|.++++|+.+++.+|.+.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 53 33233334444 45555555 33444344556666666666666666554
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.44 E-value=2.1e-09 Score=120.58 Aligned_cols=153 Identities=12% Similarity=0.113 Sum_probs=102.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEcc---------CCCCCCCCCcccc-CCCCCceEEcccccccCchhhhh
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLR---------FNSLTSQLPSDLA-SCSNLRNLYLQGNHFSGEVPLFL 138 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~ 138 (663)
.+++.|+|++| ++......+...+++|+.|+|+ .|.+++.....+. ++++|+.|+++.|.+++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 57889999887 4432222344568999999983 3556543333333 48899999999999987777666
Q ss_pred c-CCccccccccc--c----cccccc-----CCCCCcccccccccccccccccCcCCCCCCC-CCCCCEEEeecCcCCCC
Q 006055 139 V-GLHHLVRLNLA--T----NNFSGE-----IPSGFKNLTKLKTLFLENNRLSGSIPGFDDV-LPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 139 ~-~l~~L~~L~l~--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~g~ 205 (663)
. .+++|+.|+|+ + |++++. ++..+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 5 58899999998 4 556521 112256778999999977 666544444444 78899999999998765
Q ss_pred CCccc----ccCCCCCccCCcC
Q 006055 206 IPKRF----QTFGSNSFLGNSL 223 (663)
Q Consensus 206 ~p~~~----~~~~~~~~~~~~l 223 (663)
.+..+ .++..+.+.+|.+
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhcCCCcCEEECcCCCC
Confidence 54333 3444444455554
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.42 E-value=7.2e-07 Score=91.71 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCC---C-CcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNH---E-NLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++||||+++.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 56899999999997 6778899764322 23468899988888865 2 23344443 57789999999988
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG----------------------------------------- 490 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~----------------------------------------- 490 (663)
+...... .++...+..++.++++.+..||+..
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8643321 2456666777778888888887443
Q ss_pred --------------------CcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 491 --------------------PNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 491 --------------------~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
+.++|+|++|.||+++++..+.|.||+.+..-
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 12499999999999998666799999988543
No 410
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=3.8e-06 Score=84.72 Aligned_cols=139 Identities=19% Similarity=0.225 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCc-ccCHHHHHHHHHHhhcCCCC---CcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDV-TISEREFKDKIEGVGAVNHE---NLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~-~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.|+.|.++.||++...+|+.++||+.... ......+..|++.++.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 579999999999999888999999996543 22346789999999999875 466676653 5799999999987
Q ss_pred hhH-----------hhccCCCC----C------------CCCCCHHHHHH---H-----------------HHHHHHHHH
Q 006055 452 LSA-----------LLHGNKGA----G------------RTPLNWEMRSL---I-----------------ALGAARGIE 484 (663)
Q Consensus 452 L~~-----------~l~~~~~~----~------------~~~l~~~~~~~---i-----------------~~~ia~al~ 484 (663)
+.. .+|..... . .-.-+|..... + ...+-+.+.
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 531 13432110 0 00124443210 0 011112223
Q ss_pred HHh-----hcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 485 YLH-----AQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 485 ~LH-----~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
.+. ...+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 332 22256999999999999988 45889999 553
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.33 E-value=4.6e-08 Score=102.05 Aligned_cols=133 Identities=17% Similarity=0.239 Sum_probs=82.2
Q ss_pred CcEEEEEcCCCCcc---------cccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhc
Q 006055 69 NRVTMLRLPGVALS---------GQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLV 139 (663)
Q Consensus 69 ~~v~~L~L~~~~l~---------g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 139 (663)
.+++.|.+.++... +.++ .++..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~-~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLS-PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCH-HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHH-HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 47777877654321 1233 24567788888888877311 2333 3 378888888888887654444454
Q ss_pred --CCcccccccccc--cccccc-----CCCCC--cccccccccccccccccCcCCCCC---CCCCCCCEEEeecCcCCCC
Q 006055 140 --GLHHLVRLNLAT--NNFSGE-----IPSGF--KNLTKLKTLFLENNRLSGSIPGFD---DVLPNLQQLNVSNNLLNGS 205 (663)
Q Consensus 140 --~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~g~ 205 (663)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..+ ..+++|+.|+|+.|.|++.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 678888888753 222111 11112 346788888888888764332222 2467888888888888763
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=5e-08 Score=91.78 Aligned_cols=111 Identities=15% Similarity=0.173 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCC-Ccccc----cCccccCCCCCCCEEEccCCCCCCC----CCccccCCCCCceEEcccccccCc----h
Q 006055 68 QNRVTMLRLPGV-ALSGQ----IPLGILGNLTSLRTLSLRFNSLTSQ----LPSDLASCSNLRNLYLQGNHFSGE----V 134 (663)
Q Consensus 68 ~~~v~~L~L~~~-~l~g~----~p~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~ 134 (663)
...++.|+|++| .+... +. ..+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 357999999999 88632 22 2456779999999999999742 334456668999999999999854 5
Q ss_pred hhhhcCCcccccccc--cccccccc----CCCCCccccccccccccccccc
Q 006055 135 PLFLVGLHHLVRLNL--ATNNFSGE----IPSGFKNLTKLKTLFLENNRLS 179 (663)
Q Consensus 135 p~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 179 (663)
...+...++|+.|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 667788889999999 88999743 3344556689999999999985
No 413
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.24 E-value=4.5e-06 Score=83.31 Aligned_cols=133 Identities=16% Similarity=0.147 Sum_probs=90.6
Q ss_pred ccccccce-EEEEEEec-CCcEEEEEEecCcccCHHHHHHHHHHhhcCC-CCCcccceEEEEecCccEEEEEccCCCChh
Q 006055 377 VLGKGTFG-TAYKAVLE-MGTIVAVKRLKDVTISEREFKDKIEGVGAVN-HENLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 377 ~lg~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.+..|..| .||+.... ++..++||+-... ....+.+|...++.+. +--+.++++++.+.+..++|||++++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34455555 68988744 4678999986543 2456788888888774 333667888888888999999999998876
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 006055 454 ALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQ-------------------------------------------- 489 (663)
Q Consensus 454 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-------------------------------------------- 489 (663)
+...... .....++.+++..|..||..
T Consensus 109 ~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543211 11223344444444444421
Q ss_pred -------C-----CcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 490 -------G-----PNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 490 -------~-----~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
- +.++|+|+.+.||++++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 127899999999999987777799999875
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.23 E-value=2.4e-07 Score=96.61 Aligned_cols=132 Identities=17% Similarity=0.218 Sum_probs=87.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCcccc--CCCCCceEEccc--ccccCc-----hhhhh-
Q 006055 69 NRVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLA--SCSNLRNLYLQG--NHFSGE-----VPLFL- 138 (663)
Q Consensus 69 ~~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~- 138 (663)
.+++.|+|++|.-. .++. +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc-eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 57888998877311 3443 33 78899999988887643323333 688899998863 222111 11222
Q ss_pred -cCCccccccccccccccccCCCCC---cccccccccccccccccCc----CCCCCCCCCCCCEEEeecCcCCC
Q 006055 139 -VGLHHLVRLNLATNNFSGEIPSGF---KNLTKLKTLFLENNRLSGS----IPGFDDVLPNLQQLNVSNNLLNG 204 (663)
Q Consensus 139 -~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g 204 (663)
..+++|+.|+|++|.+.+..+..+ ..+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.++.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 247889999999888864332222 2578899999999988753 44444567889999999888764
No 415
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=6.5e-06 Score=83.89 Aligned_cols=134 Identities=19% Similarity=0.134 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCC---CcccceEEEE-ecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHE---NLVPLRAYYY-SMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~ey~~~gs 451 (663)
+.++.|....||+. |..++||+-.. ......+.+|.+++..+.+. .+.+.+.++. ..+..++||||+++..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888899987 67788888532 22345788999999998653 2445666654 3345789999999988
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 006055 452 LSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG----------------------------------------- 490 (663)
Q Consensus 452 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~----------------------------------------- 490 (663)
+.+.... .++...+..++.++++.|..||+..
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8663211 1233444444444544444444321
Q ss_pred -----------------CcceecCCCCCCEEEcC---CCc-eEEeccccccc
Q 006055 491 -----------------PNVSHGNIKSSNILLTK---SYE-ARVSDFGLAHL 521 (663)
Q Consensus 491 -----------------~~iiHrdlk~~Nill~~---~~~-~kl~Dfg~a~~ 521 (663)
+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 24699999999999987 455 48999998754
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.10 E-value=8.6e-06 Score=85.06 Aligned_cols=142 Identities=11% Similarity=0.035 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCC--cccceEEEEec-CccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHEN--LVPLRAYYYSM-DEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~ey~~~gsL 452 (663)
+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.+++.++... ...++||||+++..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4688899999999876 4889999987542 35888888888886543 44667666654 557999999997665
Q ss_pred hHh------------------hccCCCCC---------------------------CCCCCHHHH------HHHHHHHHH
Q 006055 453 SAL------------------LHGNKGAG---------------------------RTPLNWEMR------SLIALGAAR 481 (663)
Q Consensus 453 ~~~------------------l~~~~~~~---------------------------~~~l~~~~~------~~i~~~ia~ 481 (663)
.+. ||...... .....|... ......+..
T Consensus 122 ~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 201 (362)
T 3ovc_A 122 QDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDE 201 (362)
T ss_dssp TTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence 421 12111000 000112110 011112222
Q ss_pred HHHHHhhcC--CcceecCCCCCCEEEcCCCceEEecccccccc
Q 006055 482 GIEYLHAQG--PNVSHGNIKSSNILLTKSYEARVSDFGLAHLV 522 (663)
Q Consensus 482 al~~LH~~~--~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 522 (663)
.+.++.... +.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 202 l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 202 LMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 233332221 45899999999999988777889999988653
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=8e-06 Score=85.15 Aligned_cols=78 Identities=8% Similarity=0.057 Sum_probs=53.9
Q ss_pred ccc-ccccceEEEEEEec-------CCcEEEEEEecCcc---c-CHHHHHHHHHHhhcCCC---CCcccceEEEEec---
Q 006055 376 EVL-GKGTFGTAYKAVLE-------MGTIVAVKRLKDVT---I-SEREFKDKIEGVGAVNH---ENLVPLRAYYYSM--- 437 (663)
Q Consensus 376 ~~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~--- 437 (663)
+.| +.|....+|+.... +++.+++|+..... . ....+.+|..+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88999999998754 26788999865432 1 22457788888877742 2456677776554
Q ss_pred CccEEEEEccCCCChh
Q 006055 438 DEKLLVYDYLTMGSLS 453 (663)
Q Consensus 438 ~~~~lv~ey~~~gsL~ 453 (663)
...++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 2468999999987654
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.92 E-value=5.8e-05 Score=77.87 Aligned_cols=141 Identities=19% Similarity=0.245 Sum_probs=79.4
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcC-----CCCCcccce-E--EEEecCccEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAV-----NHENLVPLR-A--YYYSMDEKLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ey~ 447 (663)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+ ..|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3566678899999987655 4899988752 33444455555444 234444311 1 122455678999999
Q ss_pred CCCChh--------------HhhccCCC----CC-----CCCCCHHHHH-------------------------------
Q 006055 448 TMGSLS--------------ALLHGNKG----AG-----RTPLNWEMRS------------------------------- 473 (663)
Q Consensus 448 ~~gsL~--------------~~l~~~~~----~~-----~~~l~~~~~~------------------------------- 473 (663)
++..+. ..+|.... .. .....|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11221100 00 0112343211
Q ss_pred HHHHHHHHHHHHHhh-----------cCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 474 LIALGAARGIEYLHA-----------QGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 474 ~i~~~ia~al~~LH~-----------~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
.+...+..++.+|+. ..+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345667763 12459999999999999888899999999774
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.75 E-value=0.00012 Score=77.30 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=48.0
Q ss_pred cccccccceEEEEEEec-CCcEEEEEEecCcc--------cCHHHHHHHHHHhhcCCC--CCcc-cceEEEEecCccEEE
Q 006055 376 EVLGKGTFGTAYKAVLE-MGTIVAVKRLKDVT--------ISEREFKDKIEGVGAVNH--ENLV-PLRAYYYSMDEKLLV 443 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~lv 443 (663)
+.||.|.++.||++... +++.++||...... .....+..|.+++..+.. +..+ +++. .+.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~--~d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE--EcCCccEEE
Confidence 57999999999999753 46889999764321 122346778888877632 3334 4443 345667899
Q ss_pred EEccCCC
Q 006055 444 YDYLTMG 450 (663)
Q Consensus 444 ~ey~~~g 450 (663)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.62 E-value=1.5e-05 Score=73.31 Aligned_cols=83 Identities=12% Similarity=0.146 Sum_probs=43.5
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCceEEccccc-ccCchhhhhcCC----cccccccccccc-ccccCCCCCccccc
Q 006055 94 TSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNH-FSGEVPLFLVGL----HHLVRLNLATNN-FSGEIPSGFKNLTK 167 (663)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~ 167 (663)
-.|+.|||+++.|+..--..+.+|++|+.|+|+++. ++..--..+..+ ++|+.|+|+++. |+..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777766654333445666777777777764 554333334443 246666665543 44221122344455
Q ss_pred ccccccccc
Q 006055 168 LKTLFLENN 176 (663)
Q Consensus 168 L~~L~l~~N 176 (663)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555544
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.56 E-value=0.00013 Score=76.60 Aligned_cols=122 Identities=11% Similarity=0.081 Sum_probs=63.0
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCcccccc
Q 006055 89 ILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKL 168 (663)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 168 (663)
.+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3455556666665433 33333445556666666666554 33333445555666666665433 332333455666666
Q ss_pred cccccccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCC
Q 006055 169 KTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFG 214 (663)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~ 214 (663)
+.+.+.+|.++..-+..|.++.+|+.+.|..| ++..-..+|.++.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 333 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCK 333 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCC
Confidence 66666666555444455666666666666433 3322233444433
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.52 E-value=1.3e-05 Score=73.71 Aligned_cols=91 Identities=10% Similarity=0.027 Sum_probs=67.7
Q ss_pred CccccCCCCCceEEcccccccCchhhhhcCCcccccccccccc-ccccCCCCCccc----cccccccccccc-ccCcCCC
Q 006055 111 PSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNN-FSGEIPSGFKNL----TKLKTLFLENNR-LSGSIPG 184 (663)
Q Consensus 111 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~ 184 (663)
|.....--+|+.|||+++.++..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|++|. |+..-=.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433333579999999999986655668899999999999995 764322334443 479999999985 7743223
Q ss_pred CCCCCCCCCEEEeecCc
Q 006055 185 FDDVLPNLQQLNVSNNL 201 (663)
Q Consensus 185 ~~~~l~~L~~L~l~~N~ 201 (663)
.+..+++|+.|+|+++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 46789999999999985
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.49 E-value=0.00061 Score=68.40 Aligned_cols=73 Identities=18% Similarity=0.248 Sum_probs=53.2
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcc-cCHHHHHHHHHHhhcCCCC---CcccceEEEEecCccEEEEEccCCCC
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVT-ISEREFKDKIEGVGAVNHE---NLVPLRAYYYSMDEKLLVYDYLTMGS 451 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~ey~~~gs 451 (663)
+.+|.|..+.||+.+..+|+.|.||+-.... .....|..|...|+.+.-. .+.+++++ +..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 4689999999999999999999999865432 2234688899988877432 23344443 24589999998765
Q ss_pred h
Q 006055 452 L 452 (663)
Q Consensus 452 L 452 (663)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.45 E-value=0.00011 Score=77.73 Aligned_cols=116 Identities=9% Similarity=0.153 Sum_probs=90.9
Q ss_pred ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCc
Q 006055 84 QIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFK 163 (663)
Q Consensus 84 ~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 163 (663)
.+....|.+.+.|+.+.+..+-. ..-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 55666788999999999976543 3456678999999999996 4566455678899999999999865 6544467899
Q ss_pred ccccccccccccccccCcCCCCCCCCCCCCEEEeecCcCC
Q 006055 164 NLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNNLLN 203 (663)
Q Consensus 164 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (663)
+|++|+.+.|.++ ++..-...|.++++|+.+++.+|...
T Consensus 332 ~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 9999999999755 66455568999999999999887643
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.38 E-value=0.0019 Score=65.48 Aligned_cols=138 Identities=18% Similarity=0.150 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC---CCCcccceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN---HENLVPLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
+.|+.|....+|+.... +..++||+.... ....+..|.+.++.+. ...+.+++.++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 46899999999998864 678889986543 3567888988888773 35677888888777789999999998765
Q ss_pred hH-----------hhccCCC---CC--------------CCCCCHHHHH---HHHHH----------------HH-HHHH
Q 006055 453 SA-----------LLHGNKG---AG--------------RTPLNWEMRS---LIALG----------------AA-RGIE 484 (663)
Q Consensus 453 ~~-----------~l~~~~~---~~--------------~~~l~~~~~~---~i~~~----------------ia-~al~ 484 (663)
.. .||.... -+ .-.-+|.... ++..+ +. ....
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2333211 00 0112565332 11111 11 1123
Q ss_pred HHhh--cCCcceecCCCCCCEEEcCCCceEEeccc
Q 006055 485 YLHA--QGPNVSHGNIKSSNILLTKSYEARVSDFG 517 (663)
Q Consensus 485 ~LH~--~~~~iiHrdlk~~Nill~~~~~~kl~Dfg 517 (663)
.|.. ..|.++|+|+.+.|++++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3432 236799999999999999887 8899974
No 426
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.35 E-value=0.00045 Score=72.80 Aligned_cols=125 Identities=17% Similarity=0.150 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCc---------------------cccCCCCCceEEcccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPS---------------------DLASCSNLRNLYLQGN 128 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~---------------------~~~~l~~L~~L~L~~N 128 (663)
.++.+.++.. ++ .|....|.+...|+.+.+..+..+ .... .|..+.+|+.+.+.++
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccc
Confidence 3455555432 22 344445555566666665544321 2223 3445555555555443
Q ss_pred cccCchhhhhcCCccccccccccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecC
Q 006055 129 HFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNN 200 (663)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 200 (663)
++..-..+|.++.+|+.++|.++ ++..-...|.++++|+.+.|..| ++..-...|.++++|+.+++..|
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 33233445555666666666433 44233445566666666666554 44333445666666666665543
No 427
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.27 E-value=0.00047 Score=72.20 Aligned_cols=126 Identities=15% Similarity=0.174 Sum_probs=99.7
Q ss_pred cEEEEEcCCCCcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccc
Q 006055 70 RVTMLRLPGVALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNL 149 (663)
Q Consensus 70 ~v~~L~L~~~~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (663)
.++.+.+..+ +. .++...|.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++.+|+.+.+
T Consensus 218 ~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 4666666543 44 577778889999999999876 66666778999999999999765 55455667899999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccCcCCCCCCCCCCCCEEEeecC
Q 006055 150 ATNNFSGEIPSGFKNLTKLKTLFLENNRLSGSIPGFDDVLPNLQQLNVSNN 200 (663)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 200 (663)
.+|.++..-...|.++.+|+.+.|.++ ++..-...|.++.+|+.+.+..|
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999988555678999999999999765 66455668999999998876443
No 428
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.27 E-value=0.00045 Score=72.85 Aligned_cols=119 Identities=10% Similarity=0.114 Sum_probs=83.6
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccccccccCCCCCccccccccccc
Q 006055 94 TSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFSGEIPSGFKNLTKLKTLFL 173 (663)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 173 (663)
..+..+.+. +.++..-...|.++.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|
T Consensus 242 ~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~l 318 (394)
T 4gt6_A 242 REDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDI 318 (394)
T ss_dssp CCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEEC
T ss_pred cccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEe
Confidence 344445443 3344444567888999999999877654 556778888999999886 4565444567889999999999
Q ss_pred ccccccCcCCCCCCCCCCCCEEEeecCcCCCCCCcccccCCCCC
Q 006055 174 ENNRLSGSIPGFDDVLPNLQQLNVSNNLLNGSIPKRFQTFGSNS 217 (663)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~~~~~ 217 (663)
.+| ++..-...|.++.+|+.+.|..+ ++..-..+|.++.+|.
T Consensus 319 p~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 319 PEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred CCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 765 66455678889999999998654 6634346677766554
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.00065 Score=68.68 Aligned_cols=70 Identities=7% Similarity=-0.001 Sum_probs=42.7
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcc-cceEEEEecCccEEEEEcc-CCCCh
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLV-PLRAYYYSMDEKLLVYDYL-TMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~ey~-~~gsL 452 (663)
+.|+.|....+|+. ..+++|+............+|..+++.+....+. ++++ .+.+..++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~--~~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLH--VDPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEE--ECTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEE--EECCCCEEEEeecCCCccC
Confidence 56888999999998 5688888754311111234577766666433333 4443 3455568999999 55444
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.24 E-value=0.0025 Score=65.02 Aligned_cols=142 Identities=13% Similarity=0.049 Sum_probs=81.4
Q ss_pred ccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCC--cccceEE-----EEecCccEEEEEccCC
Q 006055 377 VLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHEN--LVPLRAY-----YYSMDEKLLVYDYLTM 449 (663)
Q Consensus 377 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~ey~~~ 449 (663)
.++ |....||+....+|+.+++|...........+..|..++..+.... +.+++.. ....+..++||||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 455 7778999988777888999998744445667777888777663222 3334332 1223455789999987
Q ss_pred CChh-----Hh---------hcc----CCCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHhh----
Q 006055 450 GSLS-----AL---------LHG----NKGAGRTPLNWEMR----SLI---------------ALGAARGIEYLHA---- 488 (663)
Q Consensus 450 gsL~-----~~---------l~~----~~~~~~~~l~~~~~----~~i---------------~~~ia~al~~LH~---- 488 (663)
..+. .+ +|. .........++... ..+ ...+...+..+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5432 11 121 11001112232211 000 0011122333321
Q ss_pred -cCCcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 489 -QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 489 -~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
..+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 123489999999999999 4 899999987753
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.21 E-value=0.0014 Score=69.78 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=45.7
Q ss_pred CcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC-----CCccccCccccCCCC---CCCcchhhhHHHHHHHHH
Q 006055 491 PNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN-----RVAGYRAPEVTDPCK---VSQKADVYSFGVLLLELL 562 (663)
Q Consensus 491 ~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~y~aPE~~~~~~---~~~~~Dv~slGvvl~ell 562 (663)
+.++|+|+++.||++++++ ++++||+.+..-.+..... ....|.+|+...... .....++......+++..
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 3599999999999999876 9999999886543221000 012366666654211 111244556777777776
Q ss_pred hC
Q 006055 563 TG 564 (663)
Q Consensus 563 tg 564 (663)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 432
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.15 E-value=0.00072 Score=71.25 Aligned_cols=67 Identities=10% Similarity=0.076 Sum_probs=41.9
Q ss_pred ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCccccccccccc
Q 006055 84 QIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATN 152 (663)
Q Consensus 84 ~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (663)
.|+..+|.++++|+.+.|.. .++.+-...|.+|++|+.++|.+| ++..-...|.++.+|+.+.+..+
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~ 127 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM 127 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc
Confidence 46666677777777777753 365544556777777777777654 44334455666667766666543
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.95 E-value=5.9e-05 Score=70.61 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=66.3
Q ss_pred ccCCCCCCCEEEccCC-CCCCC----CCccccCCCCCceEEcccccccCc----hhhhhcCCcccccccccccccccc--
Q 006055 89 ILGNLTSLRTLSLRFN-SLTSQ----LPSDLASCSNLRNLYLQGNHFSGE----VPLFLVGLHHLVRLNLATNNFSGE-- 157 (663)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~-- 157 (663)
++.+-+.|+.|+|++| +|... +-..+..-+.|+.|+|++|+|... +-..+..-+.|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455677888888875 66421 223344556788888888887622 344455566788888888887632
Q ss_pred --CCCCCccccccccccccccc---ccC----cCCCCCCCCCCCCEEEeecCcC
Q 006055 158 --IPSGFKNLTKLKTLFLENNR---LSG----SIPGFDDVLPNLQQLNVSNNLL 202 (663)
Q Consensus 158 --~p~~~~~l~~L~~L~l~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~l 202 (663)
+-..+..-+.|++|+|++|. +.. .+-..+..-+.|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22234444567777777542 221 1222334446677777766543
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.93 E-value=0.00084 Score=58.56 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=38.2
Q ss_pred EEEcCCCCcc-cccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEccccccc
Q 006055 73 MLRLPGVALS-GQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGNHFS 131 (663)
Q Consensus 73 ~L~L~~~~l~-g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 131 (663)
.++.++++|+ ..+|.++ -++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC---CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666777775 4566532 246778888888887766666777777777777777664
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.90 E-value=0.0038 Score=63.50 Aligned_cols=143 Identities=11% Similarity=0.091 Sum_probs=77.5
Q ss_pred cccccccceEEEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCC-----CCCcccce-E--EEEecCccEEEEEcc
Q 006055 376 EVLGKGTFGTAYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVN-----HENLVPLR-A--YYYSMDEKLLVYDYL 447 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~ey~ 447 (663)
+.|+.|....+|+....+| .+++|..... .....+..|+.++..+. -|.++... | +....+..+++|+|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 4577888899999987655 6889987652 12234556666666553 23333211 1 112234568999999
Q ss_pred CCCChhH--------------hhccC----CCCC---CCCCCHHHHHH------------HHHHHHHHHHHHhhc---C-
Q 006055 448 TMGSLSA--------------LLHGN----KGAG---RTPLNWEMRSL------------IALGAARGIEYLHAQ---G- 490 (663)
Q Consensus 448 ~~gsL~~--------------~l~~~----~~~~---~~~l~~~~~~~------------i~~~ia~al~~LH~~---~- 490 (663)
++..+.. .+|.. .... .....|..... +...+...+.++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8765321 12211 1000 00012332111 011234455666532 1
Q ss_pred -CcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 491 -PNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 491 -~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 248999999999999987666899998774
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.89 E-value=0.0027 Score=65.05 Aligned_cols=142 Identities=12% Similarity=0.030 Sum_probs=70.8
Q ss_pred ccccccceE-EEEEEecCCcEEEEEEecCcccCHHHHHHHHHHhhcCCCC--CcccceEEEEecCccEEEEEccCCCChh
Q 006055 377 VLGKGTFGT-AYKAVLEMGTIVAVKRLKDVTISEREFKDKIEGVGAVNHE--NLVPLRAYYYSMDEKLLVYDYLTMGSLS 453 (663)
Q Consensus 377 ~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~~~~lv~ey~~~gsL~ 453 (663)
.|+.|.... +|+....+|..+++|....... ..+..|+.++..+... .+.+++.+. .+..+++||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~--~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG--GDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT--CCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC--ccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCcchH
Confidence 465555554 6677654467777776543220 2334455655555322 244555542 33448899999776665
Q ss_pred HhhccC---------------------CCCCCCCCCHHHHH---------H-----------HHHHHHHHHHHHh----h
Q 006055 454 ALLHGN---------------------KGAGRTPLNWEMRS---------L-----------IALGAARGIEYLH----A 488 (663)
Q Consensus 454 ~~l~~~---------------------~~~~~~~l~~~~~~---------~-----------i~~~ia~al~~LH----~ 488 (663)
+++... .......++..... . ....+...+..+. .
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 443211 00000112111100 0 0011122233331 1
Q ss_pred cCCcceecCCCCCCEEEcCC----CceEEecccccccc
Q 006055 489 QGPNVSHGNIKSSNILLTKS----YEARVSDFGLAHLV 522 (663)
Q Consensus 489 ~~~~iiHrdlk~~Nill~~~----~~~kl~Dfg~a~~~ 522 (663)
..+.++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 11359999999999999875 67999999988643
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.80 E-value=0.0062 Score=63.46 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=82.1
Q ss_pred cccccccceEEEEEEec--------CCcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCc-ccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLE--------MGTIVAVKRLKDVTISEREFKDKIEGVGAVNHENL-VPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ey 446 (663)
+.|..|-...+|+.... +++.+++|+..........+.+|..+++.+.-..+ .++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 45777888899998864 25789999864333345566788888887743333 455655432 399999
Q ss_pred cCCCChhHh-----------------hccCCCCCCCCCC--HHHHHHHHHHHH-------------------HHHHHHh-
Q 006055 447 LTMGSLSAL-----------------LHGNKGAGRTPLN--WEMRSLIALGAA-------------------RGIEYLH- 487 (663)
Q Consensus 447 ~~~gsL~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia-------------------~al~~LH- 487 (663)
+++..|..- +|...-....... |....++..++. ..+.+|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 997655311 2221111111222 444444443332 1233332
Q ss_pred ---hcC--CcceecCCCCCCEEEcCC----CceEEeccccccc
Q 006055 488 ---AQG--PNVSHGNIKSSNILLTKS----YEARVSDFGLAHL 521 (663)
Q Consensus 488 ---~~~--~~iiHrdlk~~Nill~~~----~~~kl~Dfg~a~~ 521 (663)
... ..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 222 358999999999999876 6899999998753
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0021 Score=56.04 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=48.3
Q ss_pred CEEEccCCCCC-CCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccccccccc
Q 006055 97 RTLSLRFNSLT-SQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLATNNFS 155 (663)
Q Consensus 97 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 155 (663)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 24776543 57999999999999877888999999999999999875
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.58 E-value=0.019 Score=54.01 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=67.4
Q ss_pred ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCcceecCCCCCCEEEcCCCceEEeccccccccCCCCCCC
Q 006055 451 SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHA-QGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPN 529 (663)
Q Consensus 451 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 529 (663)
+|.++|.... .++++.+++.++.|.+.+|.-+-. ..+ ..+=+.|..|++..+|.+...+ ..+ ..
T Consensus 34 SL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~ 98 (229)
T 2yle_A 34 SLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AAD--------DA 98 (229)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-ccc--------cc
Confidence 7899998654 579999999999999998877621 111 1233456899999999988764 111 01
Q ss_pred CCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCC
Q 006055 530 RVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPT 568 (663)
Q Consensus 530 ~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~ 568 (663)
....+.|||... ...+++.=|||+|+++|..+--..|-
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 122367888764 34567889999999999998755553
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.45 E-value=0.0039 Score=64.88 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=42.5
Q ss_pred cccccccceEEEEEEecC---------CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcc-cceEEEEecCccEEEEE
Q 006055 376 EVLGKGTFGTAYKAVLEM---------GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLV-PLRAYYYSMDEKLLVYD 445 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e 445 (663)
+.|+.|....+|+....+ +..+++|+.......-.....|.+++..+...+++ ++++.. ..++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 457888888999988653 26888888654321111235677777766433433 555443 3478999
Q ss_pred ccCCCCh
Q 006055 446 YLTMGSL 452 (663)
Q Consensus 446 y~~~gsL 452 (663)
|+++..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.37 E-value=0.014 Score=62.12 Aligned_cols=72 Identities=11% Similarity=0.070 Sum_probs=48.8
Q ss_pred cccccccceEEEEEEecC--------CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCc-ccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEM--------GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENL-VPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ey 446 (663)
+.|+.|....||+....+ +..+++|+.... .....+..|..++..+...++ .++++.+. -.+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~----~g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS----GGRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC----CCEEEEE
Confidence 467888889999998653 578999987432 222455678888887754444 45666542 2489999
Q ss_pred cCCCCh
Q 006055 447 LTMGSL 452 (663)
Q Consensus 447 ~~~gsL 452 (663)
+++.++
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.25 E-value=0.025 Score=60.50 Aligned_cols=73 Identities=7% Similarity=0.025 Sum_probs=46.4
Q ss_pred cccccccceEEEEEEecC-CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCcc-cceEEEEecCccEEEEEccCCCCh
Q 006055 376 EVLGKGTFGTAYKAVLEM-GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENLV-PLRAYYYSMDEKLLVYDYLTMGSL 452 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~ey~~~gsL 452 (663)
+.|+.|-...+|+....+ +..+++|+.......--....|..++..+...++. ++++++ . ..+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~--~G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--T--NGRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--T--TEEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--C--CeEEEEeeCCccC
Confidence 468888899999998764 47888998743211111125788888887655554 566655 2 2469999987544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.24 E-value=0.013 Score=60.11 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=27.3
Q ss_pred CcceecCCCCCCEEEcCCCceEEeccccccc
Q 006055 491 PNVSHGNIKSSNILLTKSYEARVSDFGLAHL 521 (663)
Q Consensus 491 ~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~~ 521 (663)
+.++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4599999999999999888899999987754
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.97 E-value=0.0012 Score=61.74 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=64.4
Q ss_pred ccCCCCCceEEcccc-cccC----chhhhhcCCccccccccccccccccCC----CCCcccccccccccccccccCc---
Q 006055 114 LASCSNLRNLYLQGN-HFSG----EVPLFLVGLHHLVRLNLATNNFSGEIP----SGFKNLTKLKTLFLENNRLSGS--- 181 (663)
Q Consensus 114 ~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~--- 181 (663)
+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|...-. ..+..-+.|+.|+|++|+|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445578999999986 7762 245667778899999999999974332 3344557899999999999742
Q ss_pred -CCCCCCCCCCCCEEEeecCc
Q 006055 182 -IPGFDDVLPNLQQLNVSNNL 201 (663)
Q Consensus 182 -~p~~~~~l~~L~~L~l~~N~ 201 (663)
+-..+..-+.|+.|+|++|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHhhCCceeEEECCCCc
Confidence 22345556779999998763
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.62 E-value=0.013 Score=38.26 Aligned_cols=32 Identities=34% Similarity=0.664 Sum_probs=23.2
Q ss_pred cccCCceeehhHHHHHHHHHHHHHHhhhheec
Q 006055 258 KLSGGAIAGIVIGSVIGFLLILLILLILCRKK 289 (663)
Q Consensus 258 ~~~~~~i~giv~~~~~~~~~~~~i~~~~~~~r 289 (663)
.++.+.+.|+++++++++.+++.+.++++|||
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 45567788999998888777776666665543
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.52 E-value=0.27 Score=51.77 Aligned_cols=73 Identities=7% Similarity=0.015 Sum_probs=46.1
Q ss_pred cccccccceEEEEEEecC--------CcEEEEEEecCcccCHHHHHHHHHHhhcCCCCCc-ccceEEEEecCccEEEEEc
Q 006055 376 EVLGKGTFGTAYKAVLEM--------GTIVAVKRLKDVTISEREFKDKIEGVGAVNHENL-VPLRAYYYSMDEKLLVYDY 446 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ey 446 (663)
+.+..|-...+|+....+ +..+++|+.......--+..+|..+++.+....+ .++++.+ ..++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEE
Confidence 457778888999988653 5789999864432111123567777766643333 3455433 34889999
Q ss_pred cCCCCh
Q 006055 447 LTMGSL 452 (663)
Q Consensus 447 ~~~gsL 452 (663)
+++..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998654
No 447
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.24 E-value=0.38 Score=50.18 Aligned_cols=141 Identities=13% Similarity=0.131 Sum_probs=79.4
Q ss_pred cccccccceEEEEEEecC--------CcEEEEEEecCcc------------cCHH-------HHHHHHHHhhcCCCCCc-
Q 006055 376 EVLGKGTFGTAYKAVLEM--------GTIVAVKRLKDVT------------ISER-------EFKDKIEGVGAVNHENL- 427 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~------------~~~~-------~~~~e~~~l~~l~h~ni- 427 (663)
+.|..|-...+|+...++ +..|.+++.-... .+++ ....|..+++.+...++
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899888653 3678888763321 1111 12247777777744444
Q ss_pred ccceEEEEecCccEEEEEccCCCChhH--h---------------hccCCCCCCCCCC--HHHHHHHHHHHH--------
Q 006055 428 VPLRAYYYSMDEKLLVYDYLTMGSLSA--L---------------LHGNKGAGRTPLN--WEMRSLIALGAA-------- 480 (663)
Q Consensus 428 v~l~~~~~~~~~~~lv~ey~~~gsL~~--~---------------l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 480 (663)
.++++++. ..+|+||+++-+|.. + +|...-.-..... |....++..++.
T Consensus 138 Pkl~~~~~----~G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP----QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET----TEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC----CCeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 45666653 239999998654421 1 1221111111222 333333332221
Q ss_pred --------------HHH----HHHhhcC--CcceecCCCCCCEEEcCC------CceEEecccccc
Q 006055 481 --------------RGI----EYLHAQG--PNVSHGNIKSSNILLTKS------YEARVSDFGLAH 520 (663)
Q Consensus 481 --------------~al----~~LH~~~--~~iiHrdlk~~Nill~~~------~~~kl~Dfg~a~ 520 (663)
.-+ .+|...+ ..++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2233332 358999999999999887 789999998874
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.02 E-value=0.13 Score=34.66 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=14.8
Q ss_pred ceeehhHHHHHHHHHHHHHHhhhheecCCCC
Q 006055 263 AIAGIVIGSVIGFLLILLILLILCRKKSNRN 293 (663)
Q Consensus 263 ~i~giv~~~~~~~~~~~~i~~~~~~~r~~~~ 293 (663)
.|.+.+++.+++++++++.+++++|+|+.++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 3444455544444444444455555554443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.73 E-value=0.2 Score=33.66 Aligned_cols=29 Identities=31% Similarity=0.465 Sum_probs=13.0
Q ss_pred eeehhHHHHHHHHHHHHHHhhhheecCCC
Q 006055 264 IAGIVIGSVIGFLLILLILLILCRKKSNR 292 (663)
Q Consensus 264 i~giv~~~~~~~~~~~~i~~~~~~~r~~~ 292 (663)
+.+.+++.+++++++++..++++|+|+.+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 44444444444444444444455544443
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.65 E-value=1.1 Score=42.05 Aligned_cols=117 Identities=14% Similarity=0.109 Sum_probs=78.4
Q ss_pred CCCCcccceEEEEecCccEEEEEccCCC-ChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCcceecCCCCC
Q 006055 423 NHENLVPLRAYYYSMDEKLLVYDYLTMG-SLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQGPNVSHGNIKSS 501 (663)
Q Consensus 423 ~h~niv~l~~~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~iiHrdlk~~ 501 (663)
.||+++.. .+-.+.+...+.|+.-+.+ ++.. ++ ..+...+++++..|+....+++.. +|--|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~~~~r----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEVNRTR----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGGGGSS----EECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHHhcCc----eEEEEecc
Confidence 57887765 3444445444445433322 2222 32 267899999999999877666543 68889999
Q ss_pred CEEEcCCCceEEeccccccccCCCCCCCCCccccCccccCCCCCCCcchhhhHHHHHHHHHhCCCCCccc
Q 006055 502 NILLTKSYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 502 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvvl~elltg~~p~~~~ 571 (663)
|++++.++.+++.-.|+-..+.|.. .++..=.-.+=+++..+++++..|+..
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P~~------------------~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDPLP------------------VSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSCCC------------------CCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred eEEEcCCCCEEEEEccCccCCCCCC------------------CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999888755443321 122222336788999999999998653
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=82.88 E-value=0.66 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.478 Sum_probs=11.3
Q ss_pred eeehhHHHHHHHHHHHHHHhhhheecC
Q 006055 264 IAGIVIGSVIGFLLILLILLILCRKKS 290 (663)
Q Consensus 264 i~giv~~~~~~~~~~~~i~~~~~~~r~ 290 (663)
+.++++| ++.++++.++++++.|||+
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 5556666 3333333333334444443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.20 E-value=3 Score=39.11 Aligned_cols=116 Identities=13% Similarity=0.043 Sum_probs=77.7
Q ss_pred CCCCcccceEEEEecCccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCcceecCCCCC
Q 006055 423 NHENLVPLRAYYYSMDEKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIE-YLHAQGPNVSHGNIKSS 501 (663)
Q Consensus 423 ~h~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~-~LH~~~~~iiHrdlk~~ 501 (663)
.||.+ -...-.+.+...+.|+.-+++.=...++ .++...+++++..|+.... +++. -+|--|.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCc
Confidence 56776 3333345556666666543433333343 2678899999998887666 5544 468889999
Q ss_pred CEEEcCCCceEEeccccccccCCCCCCCCCccccCccccCCCCCCCcchhh-hHHHHHHHHHhCCCCCccc
Q 006055 502 NILLTKSYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPCKVSQKADVY-SFGVLLLELLTGKAPTHAL 571 (663)
Q Consensus 502 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-slGvvl~elltg~~p~~~~ 571 (663)
|+++|.++.+++.-.|+-..+.|. -+ + ..|-| .+=+++..++.++..|+..
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP~-------------e~-----~-ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPPD-------------EW-----D-DERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSSC-------------SC-----C-HHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred eEEEeCCCcEEEEEcCCcccCCCC-------------CC-----C-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999988875444322 11 1 22333 6788899999999988653
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.70 E-value=0.48 Score=50.57 Aligned_cols=57 Identities=9% Similarity=-0.017 Sum_probs=17.1
Q ss_pred cccccccceEEEEEEecC-CcEEEE------EEecCcccC---HHHHHHHHHHhhcCCCCCcccceEEEE
Q 006055 376 EVLGKGTFGTAYKAVLEM-GTIVAV------KRLKDVTIS---EREFKDKIEGVGAVNHENLVPLRAYYY 435 (663)
Q Consensus 376 ~~lg~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~ 435 (663)
+.|| ||.||+|.+.. ..+||| |..+....+ ...+.+|..++...+|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4566 99999999754 468898 776553322 245778888888899999999988864
No 454
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=62.81 E-value=3.9 Score=25.55 Aligned_cols=27 Identities=41% Similarity=0.684 Sum_probs=17.9
Q ss_pred ccCCceeehhHHHHHHHHHHHHHHhhh
Q 006055 259 LSGGAIAGIVIGSVIGFLLILLILLIL 285 (663)
Q Consensus 259 ~~~~~i~giv~~~~~~~~~~~~i~~~~ 285 (663)
++.+.+.|++++.+++++++++.++++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 345667888888877766665555554
No 455
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=61.11 E-value=3.7 Score=42.66 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=24.6
Q ss_pred ceecCCCCCCEEE------cCCCceEEeccccccc
Q 006055 493 VSHGNIKSSNILL------TKSYEARVSDFGLAHL 521 (663)
Q Consensus 493 iiHrdlk~~Nill------~~~~~~kl~Dfg~a~~ 521 (663)
++|+|+.+.||++ +++..+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566799999998853
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.07 E-value=18 Score=29.11 Aligned_cols=47 Identities=17% Similarity=0.358 Sum_probs=33.1
Q ss_pred CcccccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCceEEcccc
Q 006055 80 ALSGQIPLGILGNLTSLRTLSLRFNSLTSQLPSDLASCSNLRNLYLQGN 128 (663)
Q Consensus 80 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 128 (663)
+++ .|....|.+.++|+.+.|..+ ++.+-...|.+|.+|+.+.|...
T Consensus 7 ~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444 666677888888888888754 55545567888888888877654
No 457
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=55.40 E-value=9.8 Score=24.92 Aligned_cols=12 Identities=25% Similarity=0.653 Sum_probs=5.3
Q ss_pred ehhHHHHHHHHH
Q 006055 266 GIVIGSVIGFLL 277 (663)
Q Consensus 266 giv~~~~~~~~~ 277 (663)
+++.+++.++++
T Consensus 14 ~I~~~vv~Gv~l 25 (41)
T 2k9y_A 14 AVIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEEeehhHHHHH
Confidence 344444444443
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=45.39 E-value=21 Score=25.89 Aligned_cols=18 Identities=39% Similarity=0.704 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHHHhh
Q 006055 267 IVIGSVIGFLLILLILLI 284 (663)
Q Consensus 267 iv~~~~~~~~~~~~i~~~ 284 (663)
+++|.++++++++.++.+
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 677777777666555444
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.97 E-value=41 Score=26.92 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=27.0
Q ss_pred CCCCCCCCccccCCCCCceEEcccccccCchhhhhcCCcccccccccc
Q 006055 104 NSLTSQLPSDLASCSNLRNLYLQGNHFSGEVPLFLVGLHHLVRLNLAT 151 (663)
Q Consensus 104 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 151 (663)
..++.+-...|.+|++|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455555566777777777766654 3323344555666666665544
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.26 E-value=2.5e+02 Score=30.45 Aligned_cols=47 Identities=28% Similarity=0.271 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHH--HHHHHHhhcCCcceecCCCCCCEEEcCCCceEEecccccc
Q 006055 468 NWEMRSLIALGAA--RGIEYLHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLAH 520 (663)
Q Consensus 468 ~~~~~~~i~~~ia--~al~~LH~~~~~iiHrdlk~~Nill~~~~~~kl~Dfg~a~ 520 (663)
.|..+...+...| ..+.|+=. =+|=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILG------igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILG------VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT------CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeee------ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 3566666666554 34566633 25778999999999999999999874
No 461
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.67 E-value=28 Score=23.26 Aligned_cols=33 Identities=27% Similarity=0.301 Sum_probs=23.3
Q ss_pred ceeehhHHHHHHHHHHHHHHhhhheecCCCCCC
Q 006055 263 AIAGIVIGSVIGFLLILLILLILCRKKSNRNTR 295 (663)
Q Consensus 263 ~i~giv~~~~~~~~~~~~i~~~~~~~r~~~~~~ 295 (663)
-..+|+.+++.++++++++++.++...++|+..
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 356666666666777777787778888877653
No 462
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.41 E-value=8 Score=24.44 Aligned_cols=6 Identities=33% Similarity=0.833 Sum_probs=2.3
Q ss_pred hhheec
Q 006055 284 ILCRKK 289 (663)
Q Consensus 284 ~~~~~r 289 (663)
++.|+|
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 333433
No 463
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.54 E-value=3.2e+02 Score=27.11 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=43.2
Q ss_pred ccEEEEEccCCCChhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--Cccee-cCCCCCCEEEcCCCc-eEEe
Q 006055 439 EKLLVYDYLTMGSLSALLHGNKGAGRTPLNWEMRSLIALGAARGIEYLHAQG--PNVSH-GNIKSSNILLTKSYE-ARVS 514 (663)
Q Consensus 439 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~--~~iiH-rdlk~~Nill~~~~~-~kl~ 514 (663)
..+++|||.++..|.+.-+... ...+...... ..+-.-+++++...+ -|.++ .---+.|||+++++. +.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~~k--~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTKSTMQ--QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCHHHHH--HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCHHHHH--hhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 3459999999766654322100 0012222221 112234567776654 22332 235788999987554 8889
Q ss_pred ccccccc
Q 006055 515 DFGLAHL 521 (663)
Q Consensus 515 Dfg~a~~ 521 (663)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9888854
No 464
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.58 E-value=48 Score=25.32 Aligned_cols=13 Identities=23% Similarity=0.370 Sum_probs=5.4
Q ss_pred ehhHHHHHHHHHH
Q 006055 266 GIVIGSVIGFLLI 278 (663)
Q Consensus 266 giv~~~~~~~~~~ 278 (663)
+++.|++.+++++
T Consensus 12 ~Iv~gvi~gilli 24 (79)
T 2knc_B 12 VVLLSVMGAILLI 24 (79)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 3444444444333
Done!