Query 006056
Match_columns 663
No_of_seqs 285 out of 1392
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 14:48:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aih_A Protein OS-9; beta barr 99.9 1.8E-27 6.3E-32 219.5 9.0 96 543-638 2-124 (124)
2 2fcw_B LDL receptor, low-densi 99.7 1.4E-17 4.8E-22 142.7 3.4 70 54-128 4-75 (80)
3 2fyj_A Low-density lipoprotein 99.7 6E-17 2E-21 139.3 6.9 70 54-128 6-79 (82)
4 2rl8_A Cation-dependent mannos 99.6 2.6E-15 8.8E-20 143.4 9.0 101 538-638 25-154 (154)
5 2kva_A Cation-independent mann 99.3 4.8E-12 1.7E-16 118.7 11.0 99 539-638 28-148 (148)
6 1n7d_A LDL receptor, low-densi 99.2 8.5E-12 2.9E-16 143.7 7.7 71 54-128 48-121 (699)
7 1gp0_A Cation-independent mann 99.2 2.6E-11 8.8E-16 113.7 7.5 86 552-639 39-141 (143)
8 1n7d_A LDL receptor, low-densi 99.2 1.9E-11 6.7E-16 140.6 7.6 68 54-126 89-158 (699)
9 3m0c_C LDL receptor, low-densi 99.1 3.9E-12 1.3E-16 148.7 0.0 72 54-128 25-100 (791)
10 2xrc_A Human complement factor 99.1 4.5E-11 1.5E-15 134.8 5.6 68 56-128 207-274 (565)
11 3m0c_C LDL receptor, low-densi 99.0 2.9E-11 1E-15 141.4 0.0 71 54-128 66-139 (791)
12 1jrf_A TVA LDL-A module, subgr 98.8 4.5E-09 1.5E-13 81.0 3.9 42 87-128 1-43 (47)
13 2kny_A LRP-1, linker, APO-E; l 98.8 3.5E-10 1.2E-14 96.8 -2.7 70 89-162 7-78 (80)
14 2kny_A LRP-1, linker, APO-E; l 98.6 1.1E-08 3.8E-13 87.5 1.4 58 54-113 10-73 (80)
15 1j8e_A Low-density lipoprotein 98.6 1.1E-08 3.8E-13 77.9 0.9 38 87-128 1-38 (44)
16 2lla_A Mannose-6-phosphate/ins 98.5 3.5E-07 1.2E-11 84.7 10.8 69 571-639 60-138 (140)
17 1ajj_A LR5, low-density lipopr 98.5 3E-08 1E-12 72.7 2.7 34 54-88 3-36 (37)
18 1cr8_A Protein (LOW density li 98.5 4.9E-08 1.7E-12 73.5 3.3 36 90-128 3-38 (42)
19 1cr8_A Protein (LOW density li 98.5 6.2E-08 2.1E-12 73.0 3.7 35 54-88 5-39 (42)
20 2jm4_A Relaxin receptor 1; LDL 98.5 5.8E-08 2E-12 73.5 3.5 35 54-88 8-42 (43)
21 2i1p_A Low-density lipoprotein 98.5 2.4E-08 8E-13 77.4 1.3 36 54-89 8-43 (48)
22 3dpr_E LDL-receptor class A 3; 98.5 7.5E-08 2.6E-12 71.4 3.9 36 91-128 1-36 (39)
23 3dpr_E LDL-receptor class A 3; 98.5 8E-08 2.7E-12 71.2 3.7 34 55-88 3-37 (39)
24 2knx_A Prolow-density lipoprot 98.5 4.6E-08 1.6E-12 76.6 2.3 38 54-92 8-46 (50)
25 3a7q_B Low-density lipoprotein 98.4 8.7E-08 3E-12 72.9 3.2 34 54-88 9-42 (44)
26 2jm4_A Relaxin receptor 1; LDL 98.4 8.8E-08 3E-12 72.5 3.2 37 89-128 5-41 (43)
27 1d2l_A Lipoprotein receptor re 98.4 9.6E-08 3.3E-12 73.1 3.4 33 55-88 8-40 (45)
28 2knx_A Prolow-density lipoprot 98.4 1.1E-07 3.7E-12 74.4 3.4 42 88-134 4-46 (50)
29 1d2l_A Lipoprotein receptor re 98.4 1E-07 3.5E-12 73.0 3.2 36 90-129 5-40 (45)
30 1jrf_A TVA LDL-A module, subgr 98.4 4.4E-08 1.5E-12 75.4 1.0 35 54-88 6-44 (47)
31 1k7b_A Subgroup A ROUS sarcoma 98.4 8.1E-08 2.8E-12 74.0 2.4 35 54-88 8-46 (47)
32 2m0p_A Low-density lipoprotein 98.4 4.8E-08 1.6E-12 77.1 0.8 34 54-88 8-41 (52)
33 2gtl_O Extracellular hemoglobi 98.4 1.3E-08 4.6E-13 101.7 -3.2 50 75-128 39-90 (215)
34 2m0p_A Low-density lipoprotein 98.4 1.1E-07 3.7E-12 75.1 2.3 36 90-129 6-41 (52)
35 2l21_A Cation-independent mann 98.4 7.8E-07 2.7E-11 84.5 8.4 88 552-639 39-144 (154)
36 1ajj_A LR5, low-density lipopr 98.4 1.5E-07 5E-12 69.0 2.5 34 91-128 2-35 (37)
37 3a7q_B Low-density lipoprotein 98.3 2.1E-07 7.2E-12 70.7 2.5 35 90-128 7-41 (44)
38 1k7b_A Subgroup A ROUS sarcoma 98.3 2.8E-07 9.6E-12 70.9 2.7 39 90-128 6-45 (47)
39 2i1p_A Low-density lipoprotein 98.3 1.8E-07 6.3E-12 72.3 1.4 36 90-128 6-41 (48)
40 2l2g_A IGF2R domain 11; insuli 98.3 1.3E-06 4.6E-11 82.7 7.6 70 570-639 62-141 (151)
41 1j8e_A Low-density lipoprotein 98.2 3.5E-07 1.2E-11 69.6 1.9 33 54-87 6-38 (44)
42 2fyj_A Low-density lipoprotein 98.1 1.5E-06 5.1E-11 74.4 3.0 34 90-127 4-37 (82)
43 2gtl_O Extracellular hemoglobi 98.1 7.6E-07 2.6E-11 89.1 1.3 44 54-98 56-103 (215)
44 1q25_A CI, cation-independent 98.0 1E-05 3.6E-10 88.4 9.8 66 572-638 357-432 (432)
45 2gtl_M Hemoglobin linker chain 97.9 2.5E-06 8.6E-11 85.4 2.3 33 54-86 55-88 (217)
46 2fcw_B LDL receptor, low-densi 97.9 3.5E-06 1.2E-10 71.9 2.7 35 90-128 2-36 (80)
47 2gtl_N Extracellular hemoglobi 97.8 7.6E-06 2.6E-10 81.7 3.8 48 54-101 54-109 (220)
48 2gtl_M Hemoglobin linker chain 97.7 9.2E-06 3.2E-10 81.3 2.6 38 87-127 50-88 (217)
49 2xrc_A Human complement factor 97.6 4.8E-05 1.6E-09 85.8 5.7 66 55-129 173-238 (565)
50 2gtl_N Extracellular hemoglobi 97.6 3E-05 1E-09 77.5 3.0 36 90-128 52-88 (220)
51 2v5o_A Cation-independent mann 97.6 9.6E-05 3.3E-09 84.5 7.7 86 552-639 39-141 (627)
52 3ojy_A Complement component C8 97.4 9.4E-05 3.2E-09 83.5 4.8 45 56-101 68-113 (554)
53 1q25_A CI, cation-independent 97.3 0.00038 1.3E-08 76.1 7.8 71 571-641 203-284 (432)
54 3ojy_B Complement component C8 97.2 0.00015 5E-09 81.6 4.3 42 56-101 69-111 (537)
55 2v5o_A Cation-independent mann 97.1 0.00053 1.8E-08 78.5 7.5 70 572-641 547-622 (627)
56 3ojy_B Complement component C8 96.8 0.00089 3E-08 75.3 5.6 32 94-129 69-101 (537)
57 3ojy_A Complement component C8 96.6 0.0014 4.8E-08 74.0 5.3 34 91-129 66-100 (554)
58 3t5o_A Complement component C6 94.3 0.017 6E-07 68.6 3.0 33 56-89 121-153 (913)
59 3t5o_A Complement component C6 93.1 0.048 1.6E-06 64.9 3.8 31 94-128 121-151 (913)
60 1gmj_A ATPase inhibitor; coile 64.2 50 0.0017 28.2 9.5 43 162-204 35-77 (84)
61 3iv1_A Tumor susceptibility ge 58.8 82 0.0028 26.6 11.0 26 179-204 33-58 (78)
62 1m1j_C Fibrinogen gamma chain; 56.2 1.1E+02 0.0037 33.2 13.0 19 119-139 7-25 (409)
63 1m1j_B Fibrinogen beta chain; 51.9 2.8E+02 0.0095 30.6 15.7 18 120-139 70-87 (464)
64 3mq9_A Bone marrow stromal ant 51.0 64 0.0022 34.6 10.3 22 169-190 395-416 (471)
65 2dfs_A Myosin-5A; myosin-V, in 50.6 2.3E+02 0.0079 34.4 15.9 13 175-187 988-1000(1080)
66 1deq_A Fibrinogen (alpha chain 49.4 2E+02 0.0069 30.9 13.3 13 130-142 45-57 (390)
67 3mq7_A Bone marrow stromal ant 46.7 1.2E+02 0.004 27.5 9.4 32 172-203 58-89 (121)
68 3nmd_A CGMP dependent protein 46.5 60 0.002 27.0 6.9 15 183-197 45-59 (72)
69 1uii_A Geminin; human, DNA rep 46.3 1.1E+02 0.0038 26.1 8.7 40 161-200 36-75 (83)
70 3ghg_C Fibrinogen gamma chain; 45.7 1E+02 0.0035 33.4 10.7 19 119-139 7-25 (411)
71 1m1j_A Fibrinogen alpha subuni 45.3 1.9E+02 0.0064 31.9 12.5 19 124-144 38-57 (491)
72 1hjb_A Ccaat/enhancer binding 43.1 1.6E+02 0.0054 25.2 9.8 28 175-202 40-67 (87)
73 3mq9_A Bone marrow stromal ant 41.0 2.2E+02 0.0074 30.3 12.6 27 168-194 401-427 (471)
74 3hnw_A Uncharacterized protein 39.3 2E+02 0.0069 26.4 10.2 33 172-204 76-108 (138)
75 3ghg_A Fibrinogen alpha chain; 38.7 3E+02 0.01 30.8 13.0 14 131-144 43-56 (562)
76 2ocy_A RAB guanine nucleotide 37.4 2.7E+02 0.0092 26.3 11.0 31 169-199 77-108 (154)
77 3mq7_A Bone marrow stromal ant 36.6 2.4E+02 0.0083 25.5 14.1 21 179-199 72-92 (121)
78 2v71_A Nuclear distribution pr 35.9 2.5E+02 0.0087 27.2 10.7 67 138-204 9-75 (189)
79 2v66_B Nuclear distribution pr 35.7 2.4E+02 0.0082 25.2 12.1 44 167-210 31-74 (111)
80 3vkg_A Dynein heavy chain, cyt 35.6 3.9E+02 0.013 36.5 15.5 13 553-565 2423-2435(3245)
81 2l5g_B Putative uncharacterize 34.1 60 0.0021 24.3 4.5 32 175-206 6-37 (42)
82 1gu4_A CAAT/enhancer binding p 32.6 2.2E+02 0.0075 23.8 9.7 25 176-200 41-65 (78)
83 2zxx_A Geminin; coiled-coil, c 32.4 2.3E+02 0.0078 23.9 9.0 30 168-197 31-60 (79)
84 1hvw_A Omega-ACTX-HV1A, omega- 31.1 27 0.00092 23.5 2.0 18 107-124 1-18 (26)
85 1wlq_A Geminin; coiled-coil; 2 30.2 2.3E+02 0.008 24.1 8.1 38 163-200 30-67 (83)
86 1t2k_D Cyclic-AMP-dependent tr 29.0 2.1E+02 0.007 22.4 9.7 29 164-192 22-50 (61)
87 2yy0_A C-MYC-binding protein; 28.9 96 0.0033 24.1 5.2 33 498-530 18-50 (53)
88 2wvr_A Geminin; DNA replicatio 28.8 2.1E+02 0.007 28.3 8.7 39 162-200 106-144 (209)
89 3nmd_A CGMP dependent protein 28.7 1.7E+02 0.0059 24.3 6.9 24 173-196 42-65 (72)
90 3ghg_B Fibrinogen beta chain; 27.9 1.7E+02 0.0059 32.2 8.9 18 120-139 65-82 (461)
91 3hnw_A Uncharacterized protein 27.9 3.5E+02 0.012 24.7 10.6 36 169-204 80-115 (138)
92 2wvr_A Geminin; DNA replicatio 27.8 3.5E+02 0.012 26.7 10.1 56 144-203 99-154 (209)
93 4dzn_A Coiled-coil peptide CC- 26.6 1.2E+02 0.0042 20.8 4.7 13 180-192 11-23 (33)
94 4dzn_A Coiled-coil peptide CC- 25.7 1.3E+02 0.0046 20.7 4.7 21 180-200 4-24 (33)
95 1uii_A Geminin; human, DNA rep 24.0 3.4E+02 0.011 23.1 8.7 51 144-198 30-80 (83)
96 2zxx_A Geminin; coiled-coil, c 23.8 2.9E+02 0.01 23.2 7.6 55 144-202 18-72 (79)
97 3vkg_A Dynein heavy chain, cyt 22.9 1.1E+03 0.037 32.3 16.4 13 173-185 1936-1948(3245)
98 1gmj_A ATPase inhibitor; coile 22.5 3.6E+02 0.012 23.0 9.2 19 179-197 59-77 (84)
99 2yy0_A C-MYC-binding protein; 22.2 1.2E+02 0.0039 23.6 4.5 20 181-200 22-41 (53)
100 1kd8_A GABH AIV, GCN4 acid bas 22.2 2.1E+02 0.0072 20.7 5.4 27 175-201 5-31 (36)
101 3q8t_A Beclin-1; autophagy, AT 21.9 3.6E+02 0.012 23.2 8.1 34 173-206 20-53 (96)
102 3u1c_A Tropomyosin alpha-1 cha 21.9 3.8E+02 0.013 23.0 14.4 28 174-201 33-60 (101)
103 1ic2_A Tropomyosin alpha chain 21.7 3.4E+02 0.012 22.3 9.6 61 146-206 16-76 (81)
104 1t3j_A Mitofusin 1; coiled coi 21.6 2.8E+02 0.0095 24.2 7.3 34 167-200 43-76 (96)
105 1jnm_A Proto-oncogene C-JUN; B 21.1 3E+02 0.01 21.5 7.5 10 183-192 27-36 (62)
106 2dgc_A Protein (GCN4); basic d 21.0 3.2E+02 0.011 21.7 8.0 27 173-199 25-51 (63)
107 2jee_A YIIU; FTSZ, septum, coi 21.0 3.8E+02 0.013 22.7 10.0 31 169-199 18-48 (81)
108 1rtm_1 Mannose-binding protein 20.6 98 0.0033 27.5 4.5 47 504-555 2-48 (149)
109 1kd8_B GABH BLL, GCN4 acid bas 20.2 2.1E+02 0.0072 20.7 5.1 26 175-200 5-30 (36)
110 2xdj_A Uncharacterized protein 20.1 3.9E+02 0.013 22.5 9.7 34 173-206 22-55 (83)
No 1
>3aih_A Protein OS-9; beta barrel, lectin, sugar binding protein; HET: BMA MAN; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=219.47 Aligned_cols=96 Identities=29% Similarity=0.618 Sum_probs=87.4
Q ss_pred ccceEEeecCeEEEEeecCCceeecc------CCCceeeccccc---cC------------CCeeEEEecCCccC-CCCC
Q 006056 543 YGHCFESKQNKYVYKVCPYKKATQEE------GHSTTRLGSWDK---FE------------DSYHIMLFSNGDKC-WNGP 600 (663)
Q Consensus 543 ~~~C~~~~~g~YtYelC~~~~v~Q~~------g~~~~~LG~~~~---~~------------~~y~~m~y~~G~~C-wNGp 600 (663)
.+.|+++..|||+|+|||+++|+|+| ++..++||+|.+ |. ..|++|.|.||+.| ||||
T Consensus 2 ~~~C~~~~~g~wtYe~C~~k~v~Q~h~~~~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~G~~Cd~~g~ 81 (124)
T 3aih_A 2 SAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGR 81 (124)
T ss_dssp --CCEEEEETTEEEEEETTTEEEEECEETTEECSCCEEEEEEEEEEEEEC-----------CEEEEEEEECCSBCTTTSC
T ss_pred CCcceEcCCCEEEEEECCCCeEEEecccCCCCCCCEEECccccccccccccccccccccccceeEEEEcCCCCccCCCCC
Confidence 36899999999999999999999998 345678999998 85 25899999999999 9999
Q ss_pred CceeEEEEEeCC-----CCceeeecCCCccEEEEEEecccCCC
Q 006056 601 DRSMKVRLRCGL-----KNEVTDVDEPSRCEYVALLYTPAVCS 638 (663)
Q Consensus 601 ~Rst~V~l~Cg~-----~~~i~sV~Ep~kC~Y~~~~~TPa~C~ 638 (663)
+|+|+|+|.|++ .+.|++|.||++|+|.|+|.||++|.
T Consensus 82 ~Rst~V~~~C~~~~~~~~~~i~~v~E~~~C~Y~~~v~tP~~C~ 124 (124)
T 3aih_A 82 PREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP 124 (124)
T ss_dssp BCEEEEEEEECTTCCSSCCEEEEEEEEETTEEEEEEEEGGGCC
T ss_pred CcEEEEEEEeCCCCCCCccEEEEEcCCCceEEEEEEEecccCC
Confidence 999999999998 68999999999999999999999994
No 2
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.67 E-value=1.4e-17 Score=142.68 Aligned_cols=70 Identities=34% Similarity=0.594 Sum_probs=64.5
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCCC--CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTS--ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~--aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..+.|+|.+| +|||.+|||||..||+|||||.++. .|+.+.|+|.|+ .|||.+|+|||+.||.|||||..
T Consensus 4 ~~~~F~C~~g-~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~~f~C~~g----~Ci~~~~~CDg~~DC~dgsDE~~ 75 (80)
T 2fcw_B 4 SQAEFRCHDG-KCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSS----TCIPQLWACDNDPDCEDGSDEWP 75 (80)
T ss_dssp CTTEEECTTS-CEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTTEEECTTS----CEEEGGGTTSSSCCSTTCGGGCG
T ss_pred CCCccCCCCC-CEEeeecccCCcccCCCcccccccccccCCceeeECCCC----CEEecccccCCCcCCCCCCCcCc
Confidence 3678999998 6999999999999999999999875 699999999986 79999999999999999999954
No 3
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.67 E-value=6e-17 Score=139.26 Aligned_cols=70 Identities=30% Similarity=0.415 Sum_probs=63.2
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCC-CCCC--CCC-CCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDE-PGTS--ACP-NGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE-~gt~--aC~-~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..+.|+|.+| +|||.+|||||+.||+||||| .++. .|. .+.|+|.|+ .|||.+|+|||+.||.|||||..
T Consensus 6 ~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~g----~CI~~~~~CDG~~DC~DgSDE~~ 79 (82)
T 2fyj_A 6 PPNQFSCASG-RCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNG----RCININWRCDNDNDCGDNSDEAG 79 (82)
T ss_dssp CTTEEETTSS-CEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTTS----CEEETTCBSSSSBCCSSSSSCSC
T ss_pred CCCceEeCCC-CEEeccccCCCcccCCCccccccccccccCCCCCceECCCC----CeEcHHHccCCCCcCCCCccccC
Confidence 4678999998 699999999999999999999 6664 685 489999986 79999999999999999999974
No 4
>2rl8_A Cation-dependent mannose-6-phosphate receptor; P-type lectin, lectin, glycop lysosome, membrane, transmembrane, transport; HET: NAG M6D; 1.45A {Bos taurus} SCOP: b.64.1.1 PDB: 1keo_A* 2rl7_A* 2rl6_A* 2rl9_A* 2rlb_A* 3cy4_A* 3k41_A* 3k43_A* 3k42_A* 1m6p_A* 1c39_A*
Probab=99.58 E-value=2.6e-15 Score=143.36 Aligned_cols=101 Identities=19% Similarity=0.415 Sum_probs=84.3
Q ss_pred hhhhhccceEEeec----CeEEEEeecCCc---------eeecc--CCCceeeccccccC----CCeeEEEecCCcc---
Q 006056 538 EFYSFYGHCFESKQ----NKYVYKVCPYKK---------ATQEE--GHSTTRLGSWDKFE----DSYHIMLFSNGDK--- 595 (663)
Q Consensus 538 ~~~~L~~~C~~~~~----g~YtYelC~~~~---------v~Q~~--g~~~~~LG~~~~~~----~~y~~m~y~~G~~--- 595 (663)
-|+||.++||.... +.|+|.||..+. +.|.. +...++||.|..+. .+.+.|.|.+|++
T Consensus 25 ~L~pL~~~~f~~~~~~~~~~Y~Y~~nVCg~~~~~~~~ag~cQ~~~~~~~~~~iG~~~~~~~~~g~d~i~L~Y~~G~~~~s 104 (154)
T 2rl8_A 25 RLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRFNETQIFQGSNWIMLIYKGGDEYDN 104 (154)
T ss_dssp HTGGGTTCCEECCCC---CCEEEEECSSSCCSSSSSCEEEEEEETTTCCEEEEEEEEEEEEEECSSEEEEEEEECCBCSS
T ss_pred ccccccCCeeEEeeccCCCceEEEEEEecCCCCCCCCccEEEEecCCCceEEeeeccceEEEcCCceEEEEECCCccccc
Confidence 48899999999743 899999999999 77766 33456899998874 1246789999999
Q ss_pred CCCCCCceeEEEEEeCCCC---ceeeecCC----CccEEEEEEecccCCC
Q 006056 596 CWNGPDRSMKVRLRCGLKN---EVTDVDEP----SRCEYVALLYTPAVCS 638 (663)
Q Consensus 596 CwNGp~Rst~V~l~Cg~~~---~i~sV~Ep----~kC~Y~~~~~TPa~C~ 638 (663)
|||+++|+|.|+|.|++.. .+.-|.|| +.|.|.|++.||+||.
T Consensus 105 ~c~~~~Rst~I~f~Cd~~~~~~~~~~v~E~~~~~~~C~Y~F~~~T~~ACP 154 (154)
T 2rl8_A 105 HCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS 154 (154)
T ss_dssp SGGGCBCCEEEEEEECTTCSSEEEEEEEEECCSSSCCEEEEEEEEGGGCC
T ss_pred ccCCCcceEEEEEEeCCCCCCCccEEEecccCccCceEEEEEEecCccCC
Confidence 6999999999999999875 55556654 9999999999999994
No 5
>2kva_A Cation-independent mannose-6-phosphate receptor; transport, lysosome, sugar binding, glyco membrane, phosphoprotein, transmembrane, disulfide bond; NMR {Bos taurus} PDB: 2kvb_A
Probab=99.33 E-value=4.8e-12 Score=118.73 Aligned_cols=99 Identities=17% Similarity=0.345 Sum_probs=75.4
Q ss_pred hhhhccce-EEeecCeEEEEe----------ecCCcee-ecc--CCCceeeccccc---cCCCeeEEEecCCccCCCCC-
Q 006056 539 FYSFYGHC-FESKQNKYVYKV----------CPYKKAT-QEE--GHSTTRLGSWDK---FEDSYHIMLFSNGDKCWNGP- 600 (663)
Q Consensus 539 ~~~L~~~C-~~~~~g~YtYel----------C~~~~v~-Q~~--g~~~~~LG~~~~---~~~~y~~m~y~~G~~CwNGp- 600 (663)
|.+|.+.= +....+.|+|.| |+++... |.. ++..++||.|.. |.+.++.|.|.+|+.||||+
T Consensus 28 Ls~L~~~~~y~~~~~~y~y~~niC~~~~~~~C~~~~~~Cq~~~~~~~~~~lG~~~~~~~~~~~~l~l~Y~~G~~C~~~~~ 107 (148)
T 2kva_A 28 LTPLTKKDAYKVETDKYEFHINVCGPVSVGACPPDSGACQVSRSDRKSWNLGRSNAKLSYYDGMIQLTYRDGTPYNNEKR 107 (148)
T ss_dssp CGGGCCTTCEEEECSSEEEEECSSBCCCCTTSCTTEEEEEEESSSCCEEEEEECBCCEEEETTEEEEEEBCCCCCSCTTC
T ss_pred ChhccCCCCEEEeCCCeEEEEEeCCCCCcCccCCCCeEEEEcCCCCceEEeeecCCCcEEcCCeEEEEECCCCcCCCCCC
Confidence 56666553 444556666654 4444333 665 446779999987 77889999999999999997
Q ss_pred -CceeEEEEEeCCCCc---eeeecCCCccEEEEEEecccCCC
Q 006056 601 -DRSMKVRLRCGLKNE---VTDVDEPSRCEYVALLYTPAVCS 638 (663)
Q Consensus 601 -~Rst~V~l~Cg~~~~---i~sV~Ep~kC~Y~~~~~TPa~C~ 638 (663)
+|||.|.|.|+++.. ...|.| ..|.|.|++.||+||.
T Consensus 108 ~~rst~I~f~Cd~~~~~~~p~~~~~-~~C~Y~f~~~T~~ACp 148 (148)
T 2kva_A 108 TPRATLITFLCDRDAGVGFPEYQEE-DNSTYNFRWYTSYACP 148 (148)
T ss_dssp CCCEEEEEEECCSSCSSCCEEECSC-CSSEEEEEEECGGGCC
T ss_pred ceeEEEEEEEeCCCCCCCCCEEeec-CCCEEEEEEeccccCc
Confidence 699999999998643 355665 8899999999999994
No 6
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.22 E-value=8.5e-12 Score=143.66 Aligned_cols=71 Identities=31% Similarity=0.541 Sum_probs=53.0
Q ss_pred CCCceecCCCC-CcccCCCCCCCCCCCCCCCCCCCCC--CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 54 SSNTIKCKDGS-KKFAKTQLNDDYCDCPDGTDEPGTS--ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 54 ~~~~F~C~~gs-~~Ip~s~vcDg~cDC~DGSDE~gt~--aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..+.|.|.+++ +|||.+|+|||..||+|||||.+|. .|+.+.|+|.|+ .|||.+|+|||..||.|||||..
T Consensus 48 ~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g----~Ci~~~~~Cdg~~dC~dgsDE~~ 121 (699)
T 1n7d_A 48 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG----KCISRQFVCDSDRDCLDGSDEAS 121 (699)
T ss_dssp SSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTSCSSCCCCSSCCCSSCC--------CCCTTCSSCCSSSSCSSSS
T ss_pred CCCccCCCCCCCceeCcceecCCcccCCCCcccCcccccccccCcEEcCCC----CEecHHHcCCCcCcCCCCCccCC
Confidence 45778888753 7888888888888888888888875 688888888875 68888888888888888888864
No 7
>1gp0_A Cation-independent mannose-6-phosphate receptor; insulin-like growth factor, transport, beta barrel; 1.4A {Homo sapiens} SCOP: b.64.1.1 PDB: 1e6f_A 1gp3_A 1gqb_A 2cnj_D 2l29_A 2l2a_A
Probab=99.18 E-value=2.6e-11 Score=113.69 Aligned_cols=86 Identities=16% Similarity=0.305 Sum_probs=68.5
Q ss_pred CeEEEEeecCCceeecc-------CCCceeeccccccC---CCeeEEEecCCccCCC--CCCceeEEEEEeCCC----Cc
Q 006056 552 NKYVYKVCPYKKATQEE-------GHSTTRLGSWDKFE---DSYHIMLFSNGDKCWN--GPDRSMKVRLRCGLK----NE 615 (663)
Q Consensus 552 g~YtYelC~~~~v~Q~~-------g~~~~~LG~~~~~~---~~y~~m~y~~G~~CwN--Gp~Rst~V~l~Cg~~----~~ 615 (663)
+.|++.||-- +.+-. ++..++||.|..|- +.++.|.|.+|+.||+ |++|||.|.|.|+++ ..
T Consensus 39 ~~~~~nvC~~--~~~C~~~~gac~~~~~~slG~~~~~~~~~~~~l~L~Y~~G~~C~~~~g~~rst~I~f~C~~~~~~~~~ 116 (143)
T 1gp0_A 39 GLVYMSICGE--NENCPPGVGACFGQTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNR 116 (143)
T ss_dssp EEEEECBSSC--CTTSSTTBSEEETTTCCBSCBCCCCCEEETTEEEEEECCCSBCSSSTTCBCEEEEEEEECSSCCSSCC
T ss_pred CEEEEEeCCC--cCCCCCCCEEEECCCcEEcccccceEEEECCEEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCC
Confidence 3466777753 22211 45677999999873 5789999999999996 899999999999986 56
Q ss_pred eeeecCC-CccEEEEEEecccCCCc
Q 006056 616 VTDVDEP-SRCEYVALLYTPAVCSE 639 (663)
Q Consensus 616 i~sV~Ep-~kC~Y~~~~~TPa~C~~ 639 (663)
+..|.|+ ..|.|.|.+.||+||..
T Consensus 117 ~~~v~~~~~~C~Y~f~~~T~~AC~~ 141 (143)
T 1gp0_A 117 PMLISLDKQTCTLFFSWHTPLACEQ 141 (143)
T ss_dssp CEEEEEETTTTEEEEEEEEGGGCC-
T ss_pred CEEeecCCCCcEEEEEEeecccCCC
Confidence 7889986 68999999999999964
No 8
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.17 E-value=1.9e-11 Score=140.65 Aligned_cols=68 Identities=35% Similarity=0.607 Sum_probs=59.8
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCCC--CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTS--ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDE 126 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~--aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE 126 (663)
....|+|.+| .|||.+|+|||..||+|||||.+|. .|+...|+|.++ .|||.+|+|||..||.|||||
T Consensus 89 ~~~~f~C~~g-~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~~----~Ci~~~~~Cdg~~dC~dgsDE 158 (699)
T 1n7d_A 89 SQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSS----TCIPQLWACDNDPDCEDGSDE 158 (699)
T ss_dssp CSSCCCSSCC-----CCCTTCSSCCSSSSCSSSSCCCCCCCSSCCCCSSS----CCCCTTSTTCSSCCSSSSSSS
T ss_pred ccCcEEcCCC-CEecHHHcCCCcCcCCCCCccCCcCccccCccccCCCCC----cccchhcccCCCCcCCCCccc
Confidence 4578999988 6999999999999999999999886 599999999886 799999999999999999999
No 9
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.14 E-value=3.9e-12 Score=148.73 Aligned_cols=72 Identities=33% Similarity=0.574 Sum_probs=0.0
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCC--CC--CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPG--TS--ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~g--t~--aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..+.|+|.+| +|||.+|+|||..||.|||||.+ |. .|+.+.|.|.+. .+.|||.+|+|||..||.|||||..
T Consensus 25 ~~~~f~C~~g-~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~~~~f~C~~~--~~~Ci~~~~~CDg~~dC~dgsDE~~ 100 (791)
T 3m0c_C 25 ERNEFQCQDG-KCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGR--VNRCIPQFWRCDGQVDCDNGSDEQG 100 (791)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CcCccCCCCC-CEEehhhcCCCCccCCCCCcccccccccCccCcCccccCCC--CCCEeeccccCCCCcCcCCCcccCC
Confidence 3678999998 69999999999999999999987 43 699999999983 1279999999999999999999975
No 10
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.09 E-value=4.5e-11 Score=134.76 Aligned_cols=68 Identities=31% Similarity=0.559 Sum_probs=62.9
Q ss_pred CceecCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 56 NTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTSACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 56 ~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..|.|.+| .|||..++|||..||+|||||.+|..|+++.|+|.++ .||+..++|||.-||.|||||+.
T Consensus 207 ~~~~C~~~-~ci~~~~~Cdg~~dC~d~sDE~~C~~c~~~~~~C~~~----~C~~~~~~cdG~~dC~~gsDE~~ 274 (565)
T 2xrc_A 207 DFFQCVNG-KYISQMKACDGINDCGDQSDELCCKACQGKGFHCKSG----VCIPSQYQCNGEVDCITGEDEVG 274 (565)
T ss_dssp --CBCTTS-CBCCTTSTTSSSCCSSSSSSSSSBSSCSSSCEEETTT----EEECGGGTTSSSCCSSSCTTSSS
T ss_pred CeeECCCC-CccCHHHcCCCcccCCCCcccccccccCCCceecCCC----cccCccccCCCcccCCCCccccC
Confidence 45999988 6999999999999999999999998899999999987 79999999999999999999964
No 11
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.02 E-value=2.9e-11 Score=141.39 Aligned_cols=71 Identities=31% Similarity=0.550 Sum_probs=0.0
Q ss_pred CCCceecCCC-CCcccCCCCCCCCCCCCCCCCCCCCC--CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 54 SSNTIKCKDG-SKKFAKTQLNDDYCDCPDGTDEPGTS--ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 54 ~~~~F~C~~g-s~~Ip~s~vcDg~cDC~DGSDE~gt~--aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..+.|+|.++ .+|||.+|+|||..||.|||||.+|. .|+.++|.|.|+ .|||.+|+|||..||.|||||..
T Consensus 66 ~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~~g----~Ci~~~~~CDg~~dC~dgsDE~~ 139 (791)
T 3m0c_C 66 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDG----KCISRQFVCDSDRDCLDGSDEAS 139 (791)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CcCccccCCCCCCEeeccccCCCCcCcCCCcccCCccCccccCCeEECCCC----CEECHHHcCCCcccCCCCccccc
Confidence 3567999873 37999999999999999999999986 599999999986 79999999999999999999975
No 12
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.76 E-value=4.5e-09 Score=80.98 Aligned_cols=42 Identities=38% Similarity=0.712 Sum_probs=35.6
Q ss_pred CCCCCCCCccccCC-CCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 87 GTSACPNGKFYCQN-AGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 87 gt~aC~~~~f~C~n-~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
|+.+|++++|+|.+ .++.+.|||.+|||||+.||.|||||..
T Consensus 1 g~~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~ 43 (47)
T 1jrf_A 1 GSSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 43 (47)
T ss_dssp CCCCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHH
T ss_pred CCCCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCccccc
Confidence 46789999999996 2233589999999999999999999964
No 13
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.75 E-value=3.5e-10 Score=96.78 Aligned_cols=70 Identities=24% Similarity=0.414 Sum_probs=54.4
Q ss_pred CCCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcCCCCCCC--ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 89 SACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYDGKVKCP--NTCWEAGKVARDKLKKKIATYQEGVLLR 162 (663)
Q Consensus 89 ~aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~~~~C~--n~C~e~g~~~r~~~~~~~~~~~~G~~~R 162 (663)
.+|+++.|+|.|.| .|||.+|||||+.||.|||||... ..|+ ++|.....+.+..+...+..+..++++|
T Consensus 7 ~~C~~~~f~C~~~g---~CIp~~~~CDg~~DC~DgsDE~~~-~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gLrkr 78 (80)
T 2kny_A 7 KTCGPSSFSCPGTH---VCVPERWLCDGDKDCADGADESIA-AGCLYNSTGSGSGSGSTEELRVRLASHLRKLRKR 78 (80)
T ss_dssp CCCSSSEEECTTSS---CEEEHHHHTTSSCCSSSSTTTSGG-GTCSSSSTTTTCSSCHHHHHHHHTTTTTTTTSSS
T ss_pred CCCCCCceecCCCC---eEcChhhcCCCCCCCCCCCccccc-cCCCCCcccCcccchhhhHHHHHHHHHHHHHHHH
Confidence 36999999999654 799999999999999999999752 3587 7888877777766666666555555543
No 14
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.57 E-value=1.1e-08 Score=87.52 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=45.0
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCC---C---CCCCCCccccCCCCCCCccccCCCc
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPG---T---SACPNGKFYCQNAGHSPLMIFSSKV 113 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~g---t---~aC~~~~f~C~n~g~~~~~Ip~s~V 113 (663)
..+.|+|.++..|||.+|+|||..||+|||||.. + ..|....|.|.+. ...+|+..+.
T Consensus 10 ~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~--~~~ci~~~~~ 73 (80)
T 2kny_A 10 GPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEE--LRVRLASHLR 73 (80)
T ss_dssp SSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHH--HHHHTTTTTT
T ss_pred CCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhH--HHHHHHHHHH
Confidence 4678999964489999999999999999999974 3 2577788888872 1157776554
No 15
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.56 E-value=1.1e-08 Score=77.86 Aligned_cols=38 Identities=34% Similarity=0.546 Sum_probs=34.4
Q ss_pred CCCCCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 87 GTSACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 87 gt~aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
|+..|+...|+|.|+ .|||.+|+|||+.||.|||||..
T Consensus 1 G~~~C~~~~F~C~~g----~CI~~~~~CDg~~DC~DgSDE~~ 38 (44)
T 1j8e_A 1 GSHSCSSTQFKCNSG----RCIPEHWTCDGDNDCGDYSDETH 38 (44)
T ss_dssp CCSSSCTTEEECTTS----CEEEGGGTTSSSCCSSSSGGGSH
T ss_pred CCCCCCCCceEeCCC----CeEecCcccCCCCCCCCCCCCCC
Confidence 455799999999986 79999999999999999999975
No 16
>2lla_A Mannose-6-phosphate/insulin-like growth factor II; monotreme, IGF-II, domain 11, transport; NMR {Tachyglossus aculeatus}
Probab=98.54 E-value=3.5e-07 Score=84.74 Aligned_cols=69 Identities=14% Similarity=0.371 Sum_probs=55.0
Q ss_pred Cceeeccccc---cCCCeeEEEecCCccCCCCC--CceeEEEEEeCCCC-----ceeeecCCCccEEEEEEecccCCCc
Q 006056 571 STTRLGSWDK---FEDSYHIMLFSNGDKCWNGP--DRSMKVRLRCGLKN-----EVTDVDEPSRCEYVALLYTPAVCSE 639 (663)
Q Consensus 571 ~~~~LG~~~~---~~~~y~~m~y~~G~~CwNGp--~Rst~V~l~Cg~~~-----~i~sV~Ep~kC~Y~~~~~TPa~C~~ 639 (663)
...+||.+.. |.+..+.|.|.+|+.|.+|+ +|+|.|.|.|.+.. .++-..|...|.|.|++.||+||.+
T Consensus 60 ~~~~~G~~~~~~~~~~~~l~L~Y~~G~~C~~~~~~~~st~I~F~C~~~~~~~~~p~~~~~~~~~C~y~F~w~T~~ACp~ 138 (140)
T 2lla_A 60 TGIKAGKWNQKLSYVDQVLQLVYEDGDPCPANLHLKYKSVISFVCKSDAGPTSQPLLLSVDEHTCTLFFSWHTSLACEQ 138 (140)
T ss_dssp TTEEEEECCCCEEEETTEEEEEEBCCCBCTTTSSCBCEEEEEEEECTTTTTSCEEEEEEECTTTCEEEEEEEEGGGSCC
T ss_pred CCcccceeccccEEeCCEEEEEEcCCCcCCCCCCceeEEEEEEEcCCCCCCCCCceEEeccCCCCEEEEEEeeCccCCC
Confidence 4568898764 34677899999999998874 68999999998632 1334467788999999999999965
No 17
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.54 E-value=3e-08 Score=72.71 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=30.8
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
....|+|.+| .|||.+|+|||..||+|||||.++
T Consensus 3 ~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~~C 36 (37)
T 1ajj_A 3 SAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENC 36 (37)
T ss_dssp CTTCEECTTS-CEECGGGTTSSSCCSTTCGGGTTC
T ss_pred CCCceEcCCC-CeechhhccCCCCCCCCCccccCC
Confidence 3578999988 799999999999999999999874
No 18
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.51 E-value=4.9e-08 Score=73.55 Aligned_cols=36 Identities=39% Similarity=0.596 Sum_probs=32.5
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+.+.|+|.|.| .|||.+|+|||+.||.|||||..
T Consensus 3 ~C~~~~F~C~~~g---~CI~~~~~CDg~~DC~DgSDE~~ 38 (42)
T 1cr8_A 3 GCHTDEFQCRLDG---LCIPLRWRCDGDTDCMDSSDEKS 38 (42)
T ss_dssp CSSTTCEECTTTC---CEECGGGSSSSSCCSSSSTTTTT
T ss_pred CCCCCceEeCCCC---eEcChhhcCCCCcCCCCCCcccC
Confidence 5889999999753 79999999999999999999963
No 19
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.50 E-value=6.2e-08 Score=72.96 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=30.6
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
..+.|+|.++..|||.+|+|||..||.|||||.+|
T Consensus 5 ~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 39 (42)
T 1cr8_A 5 HTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39 (42)
T ss_dssp STTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTC
T ss_pred CCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCC
Confidence 46789998644799999999999999999999764
No 20
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.50 E-value=5.8e-08 Score=73.49 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=31.0
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
..+.|+|.++..|||.+|+|||..||+|||||.+|
T Consensus 8 ~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 42 (43)
T 2jm4_A 8 SLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNC 42 (43)
T ss_dssp CTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSC
T ss_pred CCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCC
Confidence 35789999844799999999999999999999874
No 21
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.50 E-value=2.4e-08 Score=77.40 Aligned_cols=36 Identities=36% Similarity=0.599 Sum_probs=32.3
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTS 89 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~ 89 (663)
....|+|.+|..|||.+|+|||..||+|||||.++.
T Consensus 8 ~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (48)
T 2i1p_A 8 TSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCP 43 (48)
T ss_dssp CSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSC
T ss_pred CCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCC
Confidence 367899999867999999999999999999998754
No 22
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.49 E-value=7.5e-08 Score=71.39 Aligned_cols=36 Identities=33% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 91 CPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 91 C~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
|+.+.|.|.|. .+.|||.+|+|||+.||.|||||..
T Consensus 1 C~~~~f~C~~~--~g~Cip~~~~CDg~~DC~dgsDE~~ 36 (39)
T 3dpr_E 1 CRIHEISCGAH--STQCIPVSWRCDGENDCDSGEDEEN 36 (39)
T ss_dssp CCTTTCCCSSS--SSCCCCTTSSSSSSCCSTTTTTSTT
T ss_pred CCCCceecCCC--CCCEeCccccCCCcccCcCCccccc
Confidence 77889999982 1389999999999999999999964
No 23
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.48 E-value=8e-08 Score=71.25 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=30.2
Q ss_pred CCceecCC-CCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 55 SNTIKCKD-GSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 55 ~~~F~C~~-gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
...|+|.+ ..+|||.+|+|||..||+|||||.++
T Consensus 3 ~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C 37 (39)
T 3dpr_E 3 IHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37 (39)
T ss_dssp TTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTC
T ss_pred CCceecCCCCCCEeCccccCCCcccCcCCcccccC
Confidence 56899998 24899999999999999999999774
No 24
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.47 E-value=4.6e-08 Score=76.55 Aligned_cols=38 Identities=26% Similarity=0.469 Sum_probs=33.4
Q ss_pred CCCceecC-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCK-DGSKKFAKTQLNDDYCDCPDGTDEPGTSACP 92 (663)
Q Consensus 54 ~~~~F~C~-~gs~~Ip~s~vcDg~cDC~DGSDE~gt~aC~ 92 (663)
....|+|. +| .|||.+|+|||..||+|||||.++..|+
T Consensus 8 ~~~~F~C~~~g-~CI~~~~~CDG~~DC~DgSDE~~C~~C~ 46 (50)
T 2knx_A 8 GPSSFSCPGTH-VCVPERWLCDGDKDCADGADESIAAGCL 46 (50)
T ss_dssp CTTEEEETTTT-EEEETTTTTSSSCCSTTCGGGSGGGTCC
T ss_pred CCCcEEcCCCC-eEcChhhcCCCCCCCCCCCccccccCCC
Confidence 46789996 66 7999999999999999999998876675
No 25
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.44 E-value=8.7e-08 Score=72.87 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=30.8
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
....|+|.+| .|||.+|+|||..||+|||||.+|
T Consensus 9 ~~~~f~C~~g-~CI~~~~~CDg~~DC~DgSDE~~C 42 (44)
T 3a7q_B 9 EKDQFQCRNE-RCIPSVWRCDEDDDCLDHSDEDDC 42 (44)
T ss_dssp CTTEEECTTS-CEEEGGGTTSSSCCSSSSTTTSCC
T ss_pred CCCceEcCCC-CEeChhhccCCCCCCCCCccccCC
Confidence 3578999997 799999999999999999999874
No 26
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.44 E-value=8.8e-08 Score=72.49 Aligned_cols=37 Identities=27% Similarity=0.446 Sum_probs=33.1
Q ss_pred CCCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 89 SACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 89 ~aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..|+.+.|.|.|.| .|||.+|+|||+.||.|||||..
T Consensus 5 ~~C~~~~f~C~~~g---~CI~~~~~CDg~~DC~DgSDE~~ 41 (43)
T 2jm4_A 5 VKCSLGYFPCGNIT---KCLPQLLHCNGVDDCGNQADEDN 41 (43)
T ss_dssp CSCCTTEEECSSSS---CEEEGGGTTSSCCCSSSCCTTSS
T ss_pred CCCCCCeeECCCCC---eEcCHhhccCCCCCCCCCcccCC
Confidence 46999999999943 79999999999999999999964
No 27
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.44 E-value=9.6e-08 Score=73.12 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=30.6
Q ss_pred CCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 55 SNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 55 ~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
...|+|.+| +|||.+|+|||..||.|||||.++
T Consensus 8 ~~~F~C~~g-~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 8 PGEFACANS-RCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp BTCEEETTT-EEECGGGTTTSSCTTTTCSTTSTT
T ss_pred CCceEcCCC-CeEehhhccCCCCCCCCCCCCCCC
Confidence 578999998 799999999999999999999875
No 28
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.42 E-value=1.1e-07 Score=74.42 Aligned_cols=42 Identities=29% Similarity=0.533 Sum_probs=35.4
Q ss_pred CCCCCCCccccC-CCCCCCccccCCCcccCCCCCCCCCCCcCCCCCCC
Q 006056 88 TSACPNGKFYCQ-NAGHSPLMIFSSKVNDGICDCCDGSDEYDGKVKCP 134 (663)
Q Consensus 88 t~aC~~~~f~C~-n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~~~~C~ 134 (663)
...|+.++|+|. ++ .|||.+|||||+.||.|||||... ..|+
T Consensus 4 ~~~C~~~~F~C~~~g----~CI~~~~~CDG~~DC~DgSDE~~C-~~C~ 46 (50)
T 2knx_A 4 GKTCGPSSFSCPGTH----VCVPERWLCDGDKDCADGADESIA-AGCL 46 (50)
T ss_dssp TCTTCTTEEEETTTT----EEEETTTTTSSSCCSTTCGGGSGG-GTCC
T ss_pred CCCCCCCcEEcCCCC----eEcChhhcCCCCCCCCCCCccccc-cCCC
Confidence 446999999996 54 899999999999999999999863 2465
No 29
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.42 E-value=1e-07 Score=72.95 Aligned_cols=36 Identities=39% Similarity=0.592 Sum_probs=33.3
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcCC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYDG 129 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~ 129 (663)
.|+.+.|.|.|+ .|||.+|+|||+.||.|||||...
T Consensus 5 ~C~~~~F~C~~g----~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 5 QCQPGEFACANS----RCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp BTTBTCEEETTT----EEECGGGTTTSSCTTTTCSTTSTT
T ss_pred cCCCCceEcCCC----CeEehhhccCCCCCCCCCCCCCCC
Confidence 588899999986 899999999999999999999764
No 30
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.42 E-value=4.4e-08 Score=75.43 Aligned_cols=35 Identities=29% Similarity=0.558 Sum_probs=30.2
Q ss_pred CCCceecCC----CCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKD----GSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~----gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
..+.|+|.+ ...|||.+|||||..||+|||||.+|
T Consensus 6 ~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C 44 (47)
T 1jrf_A 6 PPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 44 (47)
T ss_dssp CCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHH
T ss_pred CCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccC
Confidence 467899984 34799999999999999999999763
No 31
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.41 E-value=8.1e-08 Score=73.98 Aligned_cols=35 Identities=29% Similarity=0.558 Sum_probs=30.2
Q ss_pred CCCceecCC----CCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKD----GSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~----gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
....|+|.+ ...|||.+|+|||..||+|||||.+|
T Consensus 8 ~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C 46 (47)
T 1k7b_A 8 PPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 46 (47)
T ss_dssp STTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGG
T ss_pred CCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCC
Confidence 467899983 33799999999999999999999764
No 32
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.40 E-value=4.8e-08 Score=77.09 Aligned_cols=34 Identities=26% Similarity=0.472 Sum_probs=31.0
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGT 88 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt 88 (663)
..+.|.|.+| .|||.+|+|||..||+|||||.++
T Consensus 8 ~~~~F~C~nG-~CIp~~~~CDG~~DC~DgSDE~~~ 41 (52)
T 2m0p_A 8 LDTQYTCDNH-QCISKNWVCDTDNDCGDGSDEKNC 41 (52)
T ss_dssp CSSEEECTTC-CEEETTSTTSSSCSSSSCHHHHSC
T ss_pred CCCceECCCC-CEEecCccCCCCCCCCCCCccccc
Confidence 3578999998 699999999999999999999875
No 33
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.39 E-value=1.3e-08 Score=101.67 Aligned_cols=50 Identities=26% Similarity=0.397 Sum_probs=45.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccc--CCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 75 DYCDCPDGTDEPGTSACPNGKFYC--QNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 75 g~cDC~DGSDE~gt~aC~~~~f~C--~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
++.+|.|||||.+|..|+.+.|.| .|+ .|||.+|+|||..||.|||||..
T Consensus 39 ~~~~c~d~sDE~~C~~C~~~~F~C~~~~g----~CIp~~~~CDG~~DC~DgSDE~~ 90 (215)
T 2gtl_O 39 KAGSLRHRVEELEDPSCDEHEHQCGGDDP----QCISKLFVCDGHNDCRNGEDEKD 90 (215)
T ss_dssp HHHHHHHHHHHHSCCSSCTTEEECCSSSC----CEEEGGGTTSSSCCSSSCHHHHC
T ss_pred ccccCCcchhhccCCCCCCcceeeCCCCC----cCccccccCCCCCcCCCcccccC
Confidence 356899999999999999999999 554 79999999999999999999975
No 34
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.37 E-value=1.1e-07 Score=75.09 Aligned_cols=36 Identities=36% Similarity=0.569 Sum_probs=33.4
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcCC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYDG 129 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~ 129 (663)
.|+.+.|.|.|+ .|||.+|+|||..||.|||||...
T Consensus 6 ~C~~~~F~C~nG----~CIp~~~~CDG~~DC~DgSDE~~~ 41 (52)
T 2m0p_A 6 SCLDTQYTCDNH----QCISKNWVCDTDNDCGDGSDEKNC 41 (52)
T ss_dssp SSCSSEEECTTC----CEEETTSTTSSSCSSSSCHHHHSC
T ss_pred CCCCCceECCCC----CEEecCccCCCCCCCCCCCccccc
Confidence 599999999986 799999999999999999999764
No 35
>2l21_A Cation-independent mannose-6-phosphate receptor; genomic imprinting, insulin-like growth factor 2, mannose 6 receptor, protein evolution; NMR {Gallus gallus}
Probab=98.36 E-value=7.8e-07 Score=84.53 Aligned_cols=88 Identities=19% Similarity=0.302 Sum_probs=64.2
Q ss_pred CeEEEEeecCC--------ceeeccCCCceeeccccc---cCCCeeEEEecCCccCC--CCCCceeEEEEEeCCC----C
Q 006056 552 NKYVYKVCPYK--------KATQEEGHSTTRLGSWDK---FEDSYHIMLFSNGDKCW--NGPDRSMKVRLRCGLK----N 614 (663)
Q Consensus 552 g~YtYelC~~~--------~v~Q~~g~~~~~LG~~~~---~~~~y~~m~y~~G~~Cw--NGp~Rst~V~l~Cg~~----~ 614 (663)
+.|++.||--- .+-|..++..++||..+. |.+..+.|.|.+|+.|- +|..|||.|.|.|.+. .
T Consensus 39 ~~y~iNVC~~~~~~C~~~~gaC~~~~~~~~slG~~~~~l~~~~~~l~L~Y~~Gs~C~~~~~~~rsT~I~F~Cd~~~~~~~ 118 (154)
T 2l21_A 39 RKIELNVCAEAKSSCANGAAVCITDGPKTLNAGKLSKTLTYEDQVLKLVYEDGDPCPTDLKMKHKSYFSFVCKSDAGDDS 118 (154)
T ss_dssp CEEEECSSSCCSSSSSSSEEEEEEETTEEEEEEECCCCCEEETTEEEEEEECCCCCSSCSSSCCEEEEEEECCSSCTTTT
T ss_pred CEEEEEeCCCccCCCCCCCEEEEECCCCeEEcccccceEEEeCCEEEEEECCCCcCCCCCCCEEEEEEEEEECCCCCCCC
Confidence 45666677421 122322334568998764 34577899999999993 5779999999999774 2
Q ss_pred ceeeecC-CCccEEEEEEecccCCCc
Q 006056 615 EVTDVDE-PSRCEYVALLYTPAVCSE 639 (663)
Q Consensus 615 ~i~sV~E-p~kC~Y~~~~~TPa~C~~ 639 (663)
.+.-|.| ...|.|.|.+.||+||..
T Consensus 119 ~p~~v~~~~d~C~Y~F~w~T~~AC~~ 144 (154)
T 2l21_A 119 QPVFLSFDEQTCTSYFSWHTSLACEE 144 (154)
T ss_dssp CEEEEEEETTTTEEEEEEECTTTCCS
T ss_pred ceEEEEECCCCeEEEEEEeccccCCC
Confidence 5667764 667999999999999974
No 36
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.36 E-value=1.5e-07 Score=69.02 Aligned_cols=34 Identities=41% Similarity=0.508 Sum_probs=31.5
Q ss_pred CCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 91 CPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 91 C~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
|+...|.|.|+ .|||.+|+|||+.||.|||||..
T Consensus 2 C~~~~f~C~~g----~Ci~~~~~CDg~~DC~DgsDE~~ 35 (37)
T 1ajj_A 2 CSAFEFHCLSG----ECIHSSWRCDGGPDCKDKSDEEN 35 (37)
T ss_dssp CCTTCEECTTS----CEECGGGTTSSSCCSTTCGGGTT
T ss_pred CCCCceEcCCC----CeechhhccCCCCCCCCCccccC
Confidence 78889999986 79999999999999999999963
No 37
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.31 E-value=2.1e-07 Score=70.74 Aligned_cols=35 Identities=40% Similarity=0.513 Sum_probs=31.9
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+...|.|.|+ .|||.+|+|||+.||.|||||..
T Consensus 7 ~C~~~~f~C~~g----~CI~~~~~CDg~~DC~DgSDE~~ 41 (44)
T 3a7q_B 7 ECEKDQFQCRNE----RCIPSVWRCDEDDDCLDHSDEDD 41 (44)
T ss_dssp -CCTTEEECTTS----CEEEGGGTTSSSCCSSSSTTTSC
T ss_pred CCCCCceEcCCC----CEeChhhccCCCCCCCCCccccC
Confidence 699999999996 89999999999999999999963
No 38
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.28 E-value=2.8e-07 Score=70.94 Aligned_cols=39 Identities=36% Similarity=0.693 Sum_probs=32.2
Q ss_pred CCCCCccccCCC-CCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQNA-GHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n~-g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+.++|.|.+. +..+.|||.+|+|||+.||.|||||..
T Consensus 6 ~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~ 45 (47)
T 1k7b_A 6 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 45 (47)
T ss_dssp CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGG
T ss_pred CCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCC
Confidence 588999999841 011389999999999999999999964
No 39
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.27 E-value=1.8e-07 Score=72.35 Aligned_cols=36 Identities=36% Similarity=0.638 Sum_probs=32.8
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+.+.|+|.|++ .|||.+|+|||+.||.|||||..
T Consensus 6 ~C~~~~F~C~~g~---~CI~~~~~CDG~~DC~DgSDE~~ 41 (48)
T 2i1p_A 6 NCTSAQFKCADGS---SCINSRYRCDGVYDCRDNSDEAG 41 (48)
T ss_dssp CCCSSSEECSSSS---CEECGGGSSSSSCCSSSSHHHHS
T ss_pred CCCCCeeECCCCC---EeCCHhhcCCCCCCCCCCccccc
Confidence 5888999999963 69999999999999999999974
No 40
>2l2g_A IGF2R domain 11; insulin-like growth factor 2, mannose 6 phosphate receptor, imprinting, protein evolution, signaling protein; NMR {Monodelphis domestica}
Probab=98.27 E-value=1.3e-06 Score=82.75 Aligned_cols=70 Identities=19% Similarity=0.392 Sum_probs=56.3
Q ss_pred CCceeeccccc---cCCCeeEEEecCCccCCC--CCCceeEEEEEeCCC----CceeeecC-CCccEEEEEEecccCCCc
Q 006056 570 HSTTRLGSWDK---FEDSYHIMLFSNGDKCWN--GPDRSMKVRLRCGLK----NEVTDVDE-PSRCEYVALLYTPAVCSE 639 (663)
Q Consensus 570 ~~~~~LG~~~~---~~~~y~~m~y~~G~~CwN--Gp~Rst~V~l~Cg~~----~~i~sV~E-p~kC~Y~~~~~TPa~C~~ 639 (663)
+..++||.++. |.+..+.|.|.+|+.|-+ |.+|||.|.|.|.++ ..+.-|.| ...|.|.|.+.||+||..
T Consensus 62 ~~~~s~G~~~~~l~~~~~~l~L~Y~~Gs~C~~~~~~~rst~I~F~Cd~~~~~~~~p~~v~~~~~~C~Y~F~w~T~~AC~~ 141 (151)
T 2l2g_A 62 LTKINAGSWNSQLMYVDQVLQLVYDDGAPCPSKNALKYKSVISFVCTHDSGANNKPVFVSLDKQTCTLYFSWHTPLACEK 141 (151)
T ss_dssp SSCCEEEECCCCEEEETTEEEEEECSCSBCCSSSSSBCEEEEEEEECSSSSCCCCEEEEEEETTTTEEEEEEEEGGGSCC
T ss_pred CCceEeeecccceEEECCEEEEEECCCCCCCCCCCceeEEEEEEEECCCCCCCCCcEEEEecCCceEEEEEEechhcCCC
Confidence 34568888764 235678999999999953 568999999999874 35577888 667999999999999964
No 41
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.22 E-value=3.5e-07 Score=69.55 Aligned_cols=33 Identities=33% Similarity=0.494 Sum_probs=30.3
Q ss_pred CCCceecCCCCCcccCCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPG 87 (663)
Q Consensus 54 ~~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~g 87 (663)
....|+|.+| .|||.+|+|||..||.|||||.+
T Consensus 6 ~~~~F~C~~g-~CI~~~~~CDg~~DC~DgSDE~~ 38 (44)
T 1j8e_A 6 SSTQFKCNSG-RCIPEHWTCDGDNDCGDYSDETH 38 (44)
T ss_dssp CTTEEECTTS-CEEEGGGTTSSSCCSSSSGGGSH
T ss_pred CCCceEeCCC-CeEecCcccCCCCCCCCCCCCCC
Confidence 4678999988 69999999999999999999976
No 42
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=98.07 E-value=1.5e-06 Score=74.42 Aligned_cols=34 Identities=38% Similarity=0.496 Sum_probs=31.7
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCc
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEY 127 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~ 127 (663)
.|+.+.|+|.|+ .|||.+|||||+.||.|||||.
T Consensus 4 ~C~~~~f~C~~g----~Ci~~~~~CDg~~DC~DgsDE~ 37 (82)
T 2fyj_A 4 TCPPNQFSCASG----RCIPISWTCDLDDDCGDRSDES 37 (82)
T ss_dssp SSCTTEEETTSS----CEEETTSSSSCSSSSCSTTTTT
T ss_pred CCCCCceEeCCC----CEEeccccCCCcccCCCccccc
Confidence 588999999986 7999999999999999999993
No 43
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.06 E-value=7.6e-07 Score=89.07 Aligned_cols=44 Identities=25% Similarity=0.425 Sum_probs=37.4
Q ss_pred CCCceec--CCCCCcccCCCCCCCCCCCCCCCCCCCCC--CCCCCcccc
Q 006056 54 SSNTIKC--KDGSKKFAKTQLNDDYCDCPDGTDEPGTS--ACPNGKFYC 98 (663)
Q Consensus 54 ~~~~F~C--~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~--aC~~~~f~C 98 (663)
..+.|+| .+| +|||.+|+|||..||+|||||.+|. .|+...|.|
T Consensus 56 ~~~~F~C~~~~g-~CIp~~~~CDG~~DC~DgSDE~~C~~~~C~~~~F~c 103 (215)
T 2gtl_O 56 DEHEHQCGGDDP-QCISKLFVCDGHNDCRNGEDEKDCTLPTKAGDKFIG 103 (215)
T ss_dssp CTTEEECCSSSC-CEEEGGGTTSSSCCSSSCHHHHCCCCSSCTTCEEEE
T ss_pred CCcceeeCCCCC-cCccccccCCCCCcCCCcccccCCCCCCcCCCceee
Confidence 4678999 456 7999999999999999999998875 587766666
No 44
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=98.04 E-value=1e-05 Score=88.43 Aligned_cols=66 Identities=18% Similarity=0.367 Sum_probs=55.5
Q ss_pred ceeecccc----ccCCCeeEEEecCCccCCCCCCceeEEEEEeCCCC------ceeeecCCCccEEEEEEecccCCC
Q 006056 572 TTRLGSWD----KFEDSYHIMLFSNGDKCWNGPDRSMKVRLRCGLKN------EVTDVDEPSRCEYVALLYTPAVCS 638 (663)
Q Consensus 572 ~~~LG~~~----~~~~~y~~m~y~~G~~CwNGp~Rst~V~l~Cg~~~------~i~sV~Ep~kC~Y~~~~~TPa~C~ 638 (663)
..++|.+. .|.++.+.|.|.+|+.|-||..|+|.|.|.|.+.. .++-|.|. .|.|.|++.|++||.
T Consensus 357 ~~~~G~~~~~~~~~~~~~l~L~Y~~G~~C~~~~~rst~I~f~Cd~~~~~~~~~~p~~~~e~-~C~Y~f~~~T~~AC~ 432 (432)
T 1q25_A 357 VKVAGRPQNLTLRYSDGDLTLIYFGGEECSSGFQRMSVINFECNQTAGNNGRGAPVFTGEV-DCTYFFTWDTKYACV 432 (432)
T ss_dssp EEECCCTTSEEEEEETTEEEEEECCCCBCTTSCBCEEEEEEEECTTCTTTTTCCCEEEEEE-TTEEEEEEEEGGGCC
T ss_pred eEEeeEecccCEEEeCCeEEEEECCCCcCCCCCeeEEEEEEEeCCCCCcCCCCccEEEeeC-ceEEEEEEeeeEecC
Confidence 45789873 24466799999999999999999999999998843 36777887 899999999999994
No 45
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.94 E-value=2.5e-06 Score=85.40 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=29.2
Q ss_pred CCCceecCC-CCCcccCCCCCCCCCCCCCCCCCC
Q 006056 54 SSNTIKCKD-GSKKFAKTQLNDDYCDCPDGTDEP 86 (663)
Q Consensus 54 ~~~~F~C~~-gs~~Ip~s~vcDg~cDC~DGSDE~ 86 (663)
..+.|+|.+ +..|||.+|+|||..||+|||||.
T Consensus 55 ~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~ 88 (217)
T 2gtl_M 55 DEHESECRGDVPECIHDLLFCDGEKDCRDGSDED 88 (217)
T ss_dssp CTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTS
T ss_pred CCCceecCCCCCcEechhhccCCCCCCCCCCccc
Confidence 467899985 337999999999999999999996
No 46
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=97.93 E-value=3.5e-06 Score=71.87 Aligned_cols=35 Identities=37% Similarity=0.628 Sum_probs=32.4
Q ss_pred CCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+.+.|+|.|+ .|||.+|||||+.||.|||||..
T Consensus 2 ~C~~~~F~C~~g----~CI~~~~~CDg~~DC~DgSDE~~ 36 (80)
T 2fcw_B 2 TCSQAEFRCHDG----KCISRQFVCDSDRDCLDGSDEAS 36 (80)
T ss_dssp CCCTTEEECTTS----CEEEGGGTTSSSCCSTTCTTTTT
T ss_pred CCCCCccCCCCC----CEEeeecccCCcccCCCcccccc
Confidence 488899999986 79999999999999999999975
No 47
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.84 E-value=7.6e-06 Score=81.68 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=35.9
Q ss_pred CCCceecC-CCCCcccCCCCCCCCCCCCCCCCCC--CCC---CCCCC--ccccCCC
Q 006056 54 SSNTIKCK-DGSKKFAKTQLNDDYCDCPDGTDEP--GTS---ACPNG--KFYCQNA 101 (663)
Q Consensus 54 ~~~~F~C~-~gs~~Ip~s~vcDg~cDC~DGSDE~--gt~---aC~~~--~f~C~n~ 101 (663)
..+.|+|. +++.|||.+|+|||..||+|||||. +|. .|++. ++.|.++
T Consensus 54 ~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~~d 109 (220)
T 2gtl_N 54 EKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWH 109 (220)
T ss_dssp CTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEEEC
T ss_pred CCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEecCC
Confidence 35789996 3347999999999999999999995 543 45442 3456554
No 48
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.74 E-value=9.2e-06 Score=81.34 Aligned_cols=38 Identities=32% Similarity=0.436 Sum_probs=33.0
Q ss_pred CCCCCCCCccccCC-CCCCCccccCCCcccCCCCCCCCCCCc
Q 006056 87 GTSACPNGKFYCQN-AGHSPLMIFSSKVNDGICDCCDGSDEY 127 (663)
Q Consensus 87 gt~aC~~~~f~C~n-~g~~~~~Ip~s~VcDg~cDCcDGSDE~ 127 (663)
....|+.+.|.|.| .| .|||.+|+|||..||.|||||.
T Consensus 50 ~~~~C~~~~F~C~~~~g---~CI~~~~~CDG~~DC~DgSDE~ 88 (217)
T 2gtl_M 50 EEHHCDEHESECRGDVP---ECIHDLLFCDGEKDCRDGSDED 88 (217)
T ss_dssp SCCCCCTTEEECSSSSC---CEEEGGGTTSSSCCSSSSTTTS
T ss_pred CCCCCCCCceecCCCCC---cEechhhccCCCCCCCCCCccc
Confidence 34469999999986 33 7999999999999999999996
No 49
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=97.58 E-value=4.8e-05 Score=85.76 Aligned_cols=66 Identities=26% Similarity=0.290 Sum_probs=49.1
Q ss_pred CCceecCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccccCCCcccCCCCCCCCCCCcCC
Q 006056 55 SNTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTSACPNGKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYDG 129 (663)
Q Consensus 55 ~~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~aC~~~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~ 129 (663)
...|.|..+ .+++..+.||+.-+|.+++++ | |++..|.|.|+ .|||..++|||+.||.|||||...
T Consensus 173 ~sl~~C~~~-~~~~~~h~~DagV~C~~~~~~--c--~~~~~~~C~~~----~ci~~~~~Cdg~~dC~d~sDE~~C 238 (565)
T 2xrc_A 173 TSLAECTFT-KRRTMGYQDFADVVCYTQKAD--S--PMDDFFQCVNG----KYISQMKACDGINDCGDQSDELCC 238 (565)
T ss_dssp SCGGGSEEE-CCCCCSSCCCCEEEBCCC-------------CBCTTS----CBCCTTSTTSSSCCSSSSSSSSSB
T ss_pred CchhhcccC-cccccccccCCceeccccccC--C--CCcCeeECCCC----CccCHHHcCCCcccCCCCcccccc
Confidence 456788765 377888899999999877644 1 33556999986 799999999999999999999864
No 50
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.55 E-value=3e-05 Score=77.48 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=31.3
Q ss_pred CCCCCccccCC-CCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 90 ACPNGKFYCQN-AGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 90 aC~~~~f~C~n-~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
.|+.+.|.|.+ . +.|||.+|||||..||.|||||..
T Consensus 52 ~C~~~eFqC~~~~---g~CIp~~wvCDG~~DC~DGSDE~~ 88 (220)
T 2gtl_N 52 HCEKRTFQCGGNE---QECISDLLVCDGHKDCHNAHDEDP 88 (220)
T ss_dssp SSCTTEEECCSSS---CCEEETTTTTSSSCCSTTCTTSCG
T ss_pred CCCCCccCcCCCC---CcEeCcceecCCCCCCCCCCccCc
Confidence 58889999963 3 279999999999999999999963
No 51
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=97.55 E-value=9.6e-05 Score=84.54 Aligned_cols=86 Identities=16% Similarity=0.346 Sum_probs=66.4
Q ss_pred CeEEEEeecCCceeecc-------CCCceeeccccc---cCCCeeEEEecCCccCC--CCCCceeEEEEEeCCC----Cc
Q 006056 552 NKYVYKVCPYKKATQEE-------GHSTTRLGSWDK---FEDSYHIMLFSNGDKCW--NGPDRSMKVRLRCGLK----NE 615 (663)
Q Consensus 552 g~YtYelC~~~~v~Q~~-------g~~~~~LG~~~~---~~~~y~~m~y~~G~~Cw--NGp~Rst~V~l~Cg~~----~~ 615 (663)
+.|++.||-.- .+-. ++..++||.+.. |.+..+.|.|.+|+.|- +|.+|+|.|.|.|+++ ..
T Consensus 39 ~~~~~nvC~~~--~~C~~~~~aC~~~~~~slG~~~~~l~~~~~~l~L~Y~~G~~C~~~~~~~~sT~I~f~Cd~~~~~~~~ 116 (627)
T 2v5o_A 39 GLVYMSICGEN--ENCPPGVGACFGQTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNR 116 (627)
T ss_dssp EEEEECSSSCC--TTSSTTCSEEESTTCCEEEBCCCCEEEETTEEEEEEBSCSBCSSSTTCBCEEEEEEEECSSCCTTCS
T ss_pred CEEEEEeCCCc--ccCCCCcEEEecCccEecccccceeEEECCEEEEEECCCCcCCCCCCceEEEEEEEEeCCCCCcCCc
Confidence 45778888542 2111 345678998763 55678899999999996 5788999999999874 35
Q ss_pred eeeecC-CCccEEEEEEecccCCCc
Q 006056 616 VTDVDE-PSRCEYVALLYTPAVCSE 639 (663)
Q Consensus 616 i~sV~E-p~kC~Y~~~~~TPa~C~~ 639 (663)
.+-|.+ ...|.|.|.+.||+||..
T Consensus 117 p~~v~~~~~~C~y~f~w~T~~AC~~ 141 (627)
T 2v5o_A 117 PMLISLDKQTCTLFFSWHTPLACEQ 141 (627)
T ss_dssp CEEEEEETTTTEEEEEEEEGGGCCS
T ss_pred ceEeeecCCCcEEEEEEecHHhCCC
Confidence 677777 778999999999999964
No 52
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.39 E-value=9.4e-05 Score=83.48 Aligned_cols=45 Identities=22% Similarity=0.416 Sum_probs=36.7
Q ss_pred CceecC-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC
Q 006056 56 NTIKCK-DGSKKFAKTQLNDDYCDCPDGTDEPGTSACPNGKFYCQNA 101 (663)
Q Consensus 56 ~~F~C~-~gs~~Ip~s~vcDg~cDC~DGSDE~gt~aC~~~~f~C~n~ 101 (663)
..|.|. +| +|||.+|+|||..||.|||||.+|..++...+.|...
T Consensus 68 ~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~~~~~~C~~~ 113 (554)
T 3ojy_A 68 QDFQCKETG-RCLKRHLVCNGDQDCLDGSDEDDCEDVRAIDEDCSQY 113 (554)
T ss_dssp SSEECSSSC-CEECGGGTTSSSCCSSSCTTSSSCCSCCCCCTTTTTS
T ss_pred CcCccCCCC-EEcccccccCCcccCCCccccccCCCCCCCccccccc
Confidence 689999 77 7999999999999999999998876444334667543
No 53
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=97.27 E-value=0.00038 Score=76.12 Aligned_cols=71 Identities=10% Similarity=0.288 Sum_probs=55.5
Q ss_pred Cceeeccccc---c-CCCeeEEEecCCccC----CCCCCceeEEEEEeCCCCc---eeeecCCCccEEEEEEecccCCCc
Q 006056 571 STTRLGSWDK---F-EDSYHIMLFSNGDKC----WNGPDRSMKVRLRCGLKNE---VTDVDEPSRCEYVALLYTPAVCSE 639 (663)
Q Consensus 571 ~~~~LG~~~~---~-~~~y~~m~y~~G~~C----wNGp~Rst~V~l~Cg~~~~---i~sV~Ep~kC~Y~~~~~TPa~C~~ 639 (663)
...+||.... + .++.+.|.|.+|+.| |+|..|+|+|.|.|.+... +..+.+...|.|.|++.||+||..
T Consensus 203 ~~~~lG~~~~~~~~~~~~~l~L~Y~~g~~~~~~~C~~~~~st~I~f~C~~~~~~~~~~~~~~~~~C~Y~fe~~T~~ACp~ 282 (432)
T 1q25_A 203 RAFDVGRPQEGLKLVSNDRLVLSYVKEGAGQPDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYACHR 282 (432)
T ss_dssp CEEEEEEECSCCEEEETTEEEEEEECCSSCCCCTTSSCCCEEEEEEECCSSCCCCCCCEEEEESSSEEEEEEECGGGSCG
T ss_pred ceEEecccCCCceEcCCCcEEEEEcCCCcCCCCcCCCcccEEEEEEEcCCCCCCCCCceEEecCCCEEEEEEeecccCCC
Confidence 4568998775 3 256789999999543 2677899999999987433 456667889999999999999976
Q ss_pred hh
Q 006056 640 EK 641 (663)
Q Consensus 640 ~~ 641 (663)
..
T Consensus 283 ~~ 284 (432)
T 1q25_A 283 DY 284 (432)
T ss_dssp GG
T ss_pred Cc
Confidence 43
No 54
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.25 E-value=0.00015 Score=81.63 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=35.5
Q ss_pred CceecC-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC
Q 006056 56 NTIKCK-DGSKKFAKTQLNDDYCDCPDGTDEPGTSACPNGKFYCQNA 101 (663)
Q Consensus 56 ~~F~C~-~gs~~Ip~s~vcDg~cDC~DGSDE~gt~aC~~~~f~C~n~ 101 (663)
..|.|. +| +|||.+|+|||..||.|||||.+| +...+.|...
T Consensus 69 ~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sdE~~c---~~~~~~C~~~ 111 (537)
T 3ojy_B 69 EGFVCAQTG-RCVNRRLLCNGDNDCGDQSDEANC---RRIYKKCQHE 111 (537)
T ss_dssp SSEECTTTC-CEECGGGTTSSSCCSSSSCTTSSC---SSCSSCCSSC
T ss_pred CccCcCCCC-cEeeccccCCCCCCCCCccccccC---CCCCCccccC
Confidence 689999 78 799999999999999999999885 4445677654
No 55
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=97.14 E-value=0.00053 Score=78.46 Aligned_cols=70 Identities=17% Similarity=0.249 Sum_probs=52.8
Q ss_pred ceeeccccc--c--CCCeeEEEecCCccCCCCCCceeEEEEEeCCCCc--eeeecCCCccEEEEEEecccCCCchh
Q 006056 572 TTRLGSWDK--F--EDSYHIMLFSNGDKCWNGPDRSMKVRLRCGLKNE--VTDVDEPSRCEYVALLYTPAVCSEEK 641 (663)
Q Consensus 572 ~~~LG~~~~--~--~~~y~~m~y~~G~~CwNGp~Rst~V~l~Cg~~~~--i~sV~Ep~kC~Y~~~~~TPa~C~~~~ 641 (663)
..+||.... + .+..+.|.|.+|+.|-++..|||.|.|.|+..-- .+...|...|+|.|...|.+||.-.+
T Consensus 547 ~~~lG~~~~~~~~~~~~~v~l~Y~~G~~C~~~~~~st~I~f~C~~~~g~P~~~~~~~~~C~y~f~W~T~~AC~~~~ 622 (627)
T 2v5o_A 547 VQVLGLVHTQKLGVIGDKVVVTYSKGYPCGGNKTASSVIELTCTKTVGRPAFKRFDIDSCTYYFSWDSRAACAVKH 622 (627)
T ss_dssp EEEEEEGGGCEEEEETTEEEEEECCCSBCSTTCBCEEEEEEEECSSEEEEEEEEEETTTTEEEEEEEEGGGCCCC-
T ss_pred eeeccccccCcEEEECCEEEEEECCCCcCCCCCcceEEEEEEeCCCCCCcEEEEecCCCCEEEEEeCChhhccccc
Confidence 357777653 2 2456889999999998777899999999986311 23344667799999999999997544
No 56
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.82 E-value=0.00089 Score=75.29 Aligned_cols=32 Identities=28% Similarity=0.421 Sum_probs=29.4
Q ss_pred CccccC-CCCCCCccccCCCcccCCCCCCCCCCCcCC
Q 006056 94 GKFYCQ-NAGHSPLMIFSSKVNDGICDCCDGSDEYDG 129 (663)
Q Consensus 94 ~~f~C~-n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~ 129 (663)
..|.|. |+ .|||..|+|||..||.|||||...
T Consensus 69 ~~f~C~~~g----~Ci~~~~~Cdg~~dC~d~sdE~~c 101 (537)
T 3ojy_B 69 EGFVCAQTG----RCVNRRLLCNGDNDCGDQSDEANC 101 (537)
T ss_dssp SSEECTTTC----CEECGGGTTSSSCCSSSSCTTSSC
T ss_pred CccCcCCCC----cEeeccccCCCCCCCCCccccccC
Confidence 689999 76 899999999999999999999764
No 57
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.63 E-value=0.0014 Score=73.99 Aligned_cols=34 Identities=38% Similarity=0.620 Sum_probs=30.3
Q ss_pred CCCCccccC-CCCCCCccccCCCcccCCCCCCCCCCCcCC
Q 006056 91 CPNGKFYCQ-NAGHSPLMIFSSKVNDGICDCCDGSDEYDG 129 (663)
Q Consensus 91 C~~~~f~C~-n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~~ 129 (663)
|+ ..|.|. |+ .|||.+|+|||..||.|||||...
T Consensus 66 c~-~~f~C~~~g----~Ci~~~~~Cdg~~dC~d~sDE~~C 100 (554)
T 3ojy_A 66 CG-QDFQCKETG----RCLKRHLVCNGDQDCLDGSDEDDC 100 (554)
T ss_dssp CS-SSEECSSSC----CEECGGGTTSSSCCSSSCTTSSSC
T ss_pred CC-CcCccCCCC----EEcccccccCCcccCCCccccccC
Confidence 54 699999 75 799999999999999999999764
No 58
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=94.28 E-value=0.017 Score=68.63 Aligned_cols=33 Identities=27% Similarity=0.536 Sum_probs=30.1
Q ss_pred CceecCCCCCcccCCCCCCCCCCCCCCCCCCCCC
Q 006056 56 NTIKCKDGSKKFAKTQLNDDYCDCPDGTDEPGTS 89 (663)
Q Consensus 56 ~~F~C~~gs~~Ip~s~vcDg~cDC~DGSDE~gt~ 89 (663)
..|+|.+| +||+.+++|||..||.|||||.+|.
T Consensus 121 ~~F~C~~g-~ci~~~~~c~g~~dC~d~sde~~C~ 153 (913)
T 3t5o_A 121 NKFRCDSG-RCIARKLECNGENDCGDNSDERDCG 153 (913)
T ss_dssp SEEECTTS-CEEEGGGSSSSSCCSSSSGGGTTCS
T ss_pred cccccCCC-ceEccceecCCcccCCCccccccCC
Confidence 57999988 7999999999999999999998753
No 59
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=93.07 E-value=0.048 Score=64.88 Aligned_cols=31 Identities=39% Similarity=0.563 Sum_probs=28.5
Q ss_pred CccccCCCCCCCccccCCCcccCCCCCCCCCCCcC
Q 006056 94 GKFYCQNAGHSPLMIFSSKVNDGICDCCDGSDEYD 128 (663)
Q Consensus 94 ~~f~C~n~g~~~~~Ip~s~VcDg~cDCcDGSDE~~ 128 (663)
..|.|.++ .||+..|+|||..||.|||||..
T Consensus 121 ~~F~C~~g----~ci~~~~~c~g~~dC~d~sde~~ 151 (913)
T 3t5o_A 121 NKFRCDSG----RCIARKLECNGENDCGDNSDERD 151 (913)
T ss_dssp SEEECTTS----CEEEGGGSSSSSCCSSSSGGGTT
T ss_pred cccccCCC----ceEccceecCCcccCCCcccccc
Confidence 57999985 89999999999999999999965
No 60
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=64.17 E-value=50 Score=28.25 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 162 RKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQI 204 (663)
Q Consensus 162 R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~ 204 (663)
|++..++..++|..+..+|...+.+|..++..++..+.....+
T Consensus 35 rqkekEqL~~LKkkl~~el~~h~~ei~~le~~i~rhk~~i~~l 77 (84)
T 1gmj_A 35 RARAKEQLAALKKHKENEISHHAKEIERLQKEIERHKQSIKKL 77 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444555666666666666666666666666555544433
No 61
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=58.81 E-value=82 Score=26.57 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=11.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 179 ELSNLKNEEKILKGLVQQLKERKEQI 204 (663)
Q Consensus 179 ~l~~L~~e~~~le~~~~~l~~~ke~~ 204 (663)
--.+|+.....|+..+.+|+.+...+
T Consensus 33 T~~EL~~G~~KL~~mi~~l~~E~~~l 58 (78)
T 3iv1_A 33 TEEDLKKGHQKLEEMVTRLDQEVAEV 58 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444433
No 62
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=56.24 E-value=1.1e+02 Score=33.22 Aligned_cols=19 Identities=32% Similarity=0.894 Sum_probs=14.6
Q ss_pred CCCCCCCCcCCCCCCCccchh
Q 006056 119 DCCDGSDEYDGKVKCPNTCWE 139 (663)
Q Consensus 119 DCcDGSDE~~~~~~C~n~C~e 139 (663)
.||-..++++. +||++|.=
T Consensus 7 ~c~~~~~~~G~--~CPT~C~i 25 (409)
T 1m1j_C 7 NCCILDERFGS--YCPTTCGI 25 (409)
T ss_dssp TSSSCCGGGCC--EEECTTHH
T ss_pred CcccCCcccCC--cCCCcccH
Confidence 38877777764 89999964
No 63
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=51.92 E-value=2.8e+02 Score=30.57 Aligned_cols=18 Identities=39% Similarity=0.704 Sum_probs=11.3
Q ss_pred CCCCCCCcCCCCCCCccchh
Q 006056 120 CCDGSDEYDGKVKCPNTCWE 139 (663)
Q Consensus 120 CcDGSDE~~~~~~C~n~C~e 139 (663)
||--.+.++ .+||.+|.-
T Consensus 70 c~~~~~~~G--~~CPTtC~l 87 (464)
T 1m1j_B 70 CKHPLDELG--VLCPTGCEL 87 (464)
T ss_dssp EECSSTTTC--EEEECTTHH
T ss_pred ccccCCCcc--CcCCCccHH
Confidence 444444443 489999976
No 64
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=50.99 E-value=64 Score=34.56 Aligned_cols=22 Identities=14% Similarity=0.027 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHH
Q 006056 169 AKQNLVKDEAELSNLKNEEKIL 190 (663)
Q Consensus 169 a~~~~~e~~~~l~~L~~e~~~l 190 (663)
++.....++++|.++++....+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (471)
T 3mq9_A 395 ARNVTHLLQQELTEAQKGFQDV 416 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhhhHHHH
Confidence 3344444444444444444333
No 65
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=50.59 E-value=2.3e+02 Score=34.38 Aligned_cols=13 Identities=23% Similarity=0.371 Sum_probs=4.8
Q ss_pred HHHHHHHhHHHHH
Q 006056 175 KDEAELSNLKNEE 187 (663)
Q Consensus 175 e~~~~l~~L~~e~ 187 (663)
.++.+++.|+.++
T Consensus 988 ~L~~e~~~l~~~~ 1000 (1080)
T 2dfs_A 988 SLQEEIAKLRKEL 1000 (1080)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 66
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=49.43 E-value=2e+02 Score=30.89 Aligned_cols=13 Identities=38% Similarity=0.895 Sum_probs=9.6
Q ss_pred CCCCCccchhhHH
Q 006056 130 KVKCPNTCWEAGK 142 (663)
Q Consensus 130 ~~~C~n~C~e~g~ 142 (663)
+++||+.|.=.+-
T Consensus 45 G~kCPsGCrLqg~ 57 (390)
T 1deq_A 45 NTKCPSGCRMKGL 57 (390)
T ss_pred cCCCCccchHHHH
Confidence 3589999986553
No 67
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=46.72 E-value=1.2e+02 Score=27.50 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 006056 172 NLVKDEAELSNLKNEEKILKGLVQQLKERKEQ 203 (663)
Q Consensus 172 ~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~ 203 (663)
++..++++...-.+.+++|+.++..|..++.+
T Consensus 58 L~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~ 89 (121)
T 3mq7_A 58 LMASLDAEKAQGQKKVEELEGEITTLNHKLQD 89 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333455555555555555443
No 68
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.51 E-value=60 Score=27.02 Aligned_cols=15 Identities=33% Similarity=0.268 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHHH
Q 006056 183 LKNEEKILKGLVQQL 197 (663)
Q Consensus 183 L~~e~~~le~~~~~l 197 (663)
|++++.+++..+..|
T Consensus 45 LEk~L~ekd~eI~~L 59 (72)
T 3nmd_A 45 LELELDQKDELIQML 59 (72)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 69
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=46.31 E-value=1.1e+02 Score=26.10 Aligned_cols=40 Identities=28% Similarity=0.205 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 161 LRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 161 ~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
.|+.-+..+.....++..++..|+.++..++...++|+..
T Consensus 36 ~RR~AL~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~el 75 (83)
T 1uii_A 36 KRRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEV 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555556666666666777776666666666554
No 70
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=45.66 E-value=1e+02 Score=33.45 Aligned_cols=19 Identities=32% Similarity=0.894 Sum_probs=9.7
Q ss_pred CCCCCCCCcCCCCCCCccchh
Q 006056 119 DCCDGSDEYDGKVKCPNTCWE 139 (663)
Q Consensus 119 DCcDGSDE~~~~~~C~n~C~e 139 (663)
.||-.+++++. +||++|.=
T Consensus 7 ~c~~~~~~fG~--~CPTtCgl 25 (411)
T 3ghg_C 7 NCCILDERFGS--YCPTTCGI 25 (411)
T ss_dssp -------CCSC--EEECSHHH
T ss_pred CceecCcccCC--cCCCcchH
Confidence 48888888764 89999965
No 71
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=45.33 E-value=1.9e+02 Score=31.88 Aligned_cols=19 Identities=32% Similarity=0.837 Sum_probs=12.6
Q ss_pred CCC-cCCCCCCCccchhhHHHH
Q 006056 124 SDE-YDGKVKCPNTCWEAGKVA 144 (663)
Q Consensus 124 SDE-~~~~~~C~n~C~e~g~~~ 144 (663)
+|| |+ ++||+.|.=.+---
T Consensus 38 aDeDwG--vkCPSGCrLqglL~ 57 (491)
T 1m1j_A 38 VDDDWG--TKCPSGCRMQGIID 57 (491)
T ss_dssp CTTSTT--TEECCSTTHHHHHH
T ss_pred cccccc--CCCCCccchhhHHH
Confidence 445 54 48999998766433
No 72
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=43.08 E-value=1.6e+02 Score=25.21 Aligned_cols=28 Identities=21% Similarity=0.289 Sum_probs=13.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 006056 175 KDEAELSNLKNEEKILKGLVQQLKERKE 202 (663)
Q Consensus 175 e~~~~l~~L~~e~~~le~~~~~l~~~ke 202 (663)
+++.++..|+.+-..|+.+|..|+.+..
T Consensus 40 e~~~r~~~Le~EN~~Lr~~v~~L~~E~~ 67 (87)
T 1hjb_A 40 ETQHKVLELTAENERLQKKVEQLSRELS 67 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555555544433
No 73
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=41.03 E-value=2.2e+02 Score=30.35 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 006056 168 QAKQNLVKDEAELSNLKNEEKILKGLV 194 (663)
Q Consensus 168 ~a~~~~~e~~~~l~~L~~e~~~le~~~ 194 (663)
.-++...+.++.+..++++-.....-+
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (471)
T 3mq9_A 401 LLQQELTEAQKGFQDVEAQAATANHTV 427 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHhhhcchhH
Confidence 334445566666666666554433333
No 74
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=39.33 E-value=2e+02 Score=26.40 Aligned_cols=33 Identities=15% Similarity=-0.027 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 172 NLVKDEAELSNLKNEEKILKGLVQQLKERKEQI 204 (663)
Q Consensus 172 ~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~ 204 (663)
....++.++..+..++..|+..+..++.+.+.+
T Consensus 76 ~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~ 108 (138)
T 3hnw_A 76 MADSLSLDIENKDKEIYDLKHELIAAQIKAESS 108 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555555554444444433
No 75
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=38.65 E-value=3e+02 Score=30.82 Aligned_cols=14 Identities=36% Similarity=0.852 Sum_probs=10.4
Q ss_pred CCCCccchhhHHHH
Q 006056 131 VKCPNTCWEAGKVA 144 (663)
Q Consensus 131 ~~C~n~C~e~g~~~ 144 (663)
++||..|.=.+-.-
T Consensus 43 vkCPSGCrLQglLd 56 (562)
T 3ghg_A 43 YKCPSGCRMKGLID 56 (562)
T ss_dssp TEEECHHHHHHHHH
T ss_pred CCCCcccchhhhHH
Confidence 48999998766443
No 76
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=37.43 E-value=2.7e+02 Score=26.25 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHH
Q 006056 169 AKQNLVKDEAELSNLKNEE-KILKGLVQQLKE 199 (663)
Q Consensus 169 a~~~~~e~~~~l~~L~~e~-~~le~~~~~l~~ 199 (663)
|...+..+..++.+|-..+ .+....|...+.
T Consensus 77 aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~ 108 (154)
T 2ocy_A 77 AEEEADKLNKEVEDLTASLFDEANNMVADARK 108 (154)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444433 233334443333
No 77
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=36.63 E-value=2.4e+02 Score=25.49 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=8.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHH
Q 006056 179 ELSNLKNEEKILKGLVQQLKE 199 (663)
Q Consensus 179 ~l~~L~~e~~~le~~~~~l~~ 199 (663)
++.+|+.+|+.|..++..+.+
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~a 92 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASA 92 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444443333333
No 78
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=35.93 E-value=2.5e+02 Score=27.24 Aligned_cols=67 Identities=19% Similarity=0.072 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 138 WEAGKVARDKLKKKIATYQEGVLLRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQI 204 (663)
Q Consensus 138 ~e~g~~~r~~~~~~~~~~~~G~~~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~ 204 (663)
.+-..-|+....+....+...-..=.++.+..+.+-.+++++|..+++....|+..+..|+.+.+..
T Consensus 9 ~ee~~ywk~~~~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~ 75 (189)
T 2v71_A 9 KEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEAL 75 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556665555555555555555667777888888888888888888888877777777765543
No 79
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=35.72 E-value=2.4e+02 Score=25.19 Aligned_cols=44 Identities=20% Similarity=0.337 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006056 167 EQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQIEKAEEK 210 (663)
Q Consensus 167 ~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~e~~e~~ 210 (663)
.++......++.++..|+.....+...+.+|+..-.+++++++.
T Consensus 31 ~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~ 74 (111)
T 2v66_B 31 AQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRA 74 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34556677788888888888888888888888888888876553
No 80
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=35.58 E-value=3.9e+02 Score=36.49 Aligned_cols=13 Identities=8% Similarity=0.253 Sum_probs=6.8
Q ss_pred eEEEEeecCCcee
Q 006056 553 KYVYKVCPYKKAT 565 (663)
Q Consensus 553 ~YtYelC~~~~v~ 565 (663)
-|.|.+=+|-.+.
T Consensus 2423 mYQfSL~~F~~lF 2435 (3245)
T 3vkg_A 2423 LYQFSLRAFLDIF 2435 (3245)
T ss_dssp TCCCCHHHHHHHH
T ss_pred eeeCCHHHHHHHH
Confidence 5666655554443
No 81
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=34.15 E-value=60 Score=24.32 Aligned_cols=32 Identities=16% Similarity=0.363 Sum_probs=20.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006056 175 KDEAELSNLKNEEKILKGLVQQLKERKEQIEK 206 (663)
Q Consensus 175 e~~~~l~~L~~e~~~le~~~~~l~~~ke~~e~ 206 (663)
++..++.....+|...+.++.+|+.+..++++
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee 37 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLEE 37 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666667777777777777776665554
No 82
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=32.64 E-value=2.2e+02 Score=23.81 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=12.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 176 DEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 176 ~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
++.++..|+.+-..|+.+|..|+.+
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E 65 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSRE 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555555544444
No 83
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=32.44 E-value=2.3e+02 Score=23.94 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 006056 168 QAKQNLVKDEAELSNLKNEEKILKGLVQQL 197 (663)
Q Consensus 168 ~a~~~~~e~~~~l~~L~~e~~~le~~~~~l 197 (663)
.+.....++..+|..++.+|..|+..-..|
T Consensus 31 eaL~EN~~Lh~~ie~~~eEi~~LkeEN~~L 60 (79)
T 2zxx_A 31 EALKENEKLHKEIEQKDSEIARLRKENKDL 60 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444444433333
No 84
>1hvw_A Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine knot, beta-hairpin; NMR {Synthetic} SCOP: g.3.6.2
Probab=31.09 E-value=27 Score=23.49 Aligned_cols=18 Identities=28% Similarity=0.301 Sum_probs=15.1
Q ss_pred cccCCCcccCCCCCCCCC
Q 006056 107 MIFSSKVNDGICDCCDGS 124 (663)
Q Consensus 107 ~Ip~s~VcDg~cDCcDGS 124 (663)
|||+-++|-....||.||
T Consensus 1 C~psgq~Cp~~e~CCSGs 18 (26)
T 1hvw_A 1 CIPSGQPCPYNENCCSQS 18 (26)
T ss_dssp CBCTTSBCSSTTSBSSCC
T ss_pred CccCCCcCCCCccccccc
Confidence 678888888888899887
No 85
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=30.23 E-value=2.3e+02 Score=24.10 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 163 KKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 163 ~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
+.-+..+.....++.+.+..++.++..|+....+|+..
T Consensus 30 r~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~el 67 (83)
T 1wlq_A 30 RKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEV 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445555555555555555555555444443
No 86
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=29.04 E-value=2.1e+02 Score=22.36 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 006056 164 KEIEQAKQNLVKDEAELSNLKNEEKILKG 192 (663)
Q Consensus 164 ~li~~a~~~~~e~~~~l~~L~~e~~~le~ 192 (663)
.++.........+..+-..|+.++..|+.
T Consensus 22 ~~~~~Le~~~~~L~~~n~~L~~~i~~L~~ 50 (61)
T 1t2k_D 22 VWVQSLEKKAEDLSSLNGQLQSEVTLLRN 50 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333333333
No 87
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=28.93 E-value=96 Score=24.10 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=29.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006056 498 KSDAARVRKEYDESSDKLSKIQSRISSLTQKLK 530 (663)
Q Consensus 498 ~~~~~~ar~~~~~~e~~l~~l~~~i~~~~~~L~ 530 (663)
.+++..+|.+..+++.++..|..++.++.++|.
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 477889999999999999999999999998876
No 88
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=28.81 E-value=2.1e+02 Score=28.25 Aligned_cols=39 Identities=28% Similarity=0.228 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 162 RKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 162 R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
|+.-+..+.....+|..+|..|+.++..|+.+..+|+..
T Consensus 106 RR~AL~eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeL 144 (209)
T 2wvr_A 106 RRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEV 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555555555666666666555555555443
No 89
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=28.72 E-value=1.7e+02 Score=24.28 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=11.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Q 006056 173 LVKDEAELSNLKNEEKILKGLVQQ 196 (663)
Q Consensus 173 ~~e~~~~l~~L~~e~~~le~~~~~ 196 (663)
+.+++++|.+++.+|..|+.++.+
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444443
No 90
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=27.95 E-value=1.7e+02 Score=32.18 Aligned_cols=18 Identities=22% Similarity=0.604 Sum_probs=13.7
Q ss_pred CCCCCCCcCCCCCCCccchh
Q 006056 120 CCDGSDEYDGKVKCPNTCWE 139 (663)
Q Consensus 120 CcDGSDE~~~~~~C~n~C~e 139 (663)
||-.+++++. +||.+|.=
T Consensus 65 c~~~~~~fG~--yCPTtCgl 82 (461)
T 3ghg_B 65 CLHADPDLGV--LCPTGCQL 82 (461)
T ss_dssp CBCSSTTTCB--CEECHHHH
T ss_pred ccccCcccCC--cCCCcchH
Confidence 7776677754 89999964
No 91
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=27.85 E-value=3.5e+02 Score=24.72 Aligned_cols=36 Identities=11% Similarity=0.145 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 006056 169 AKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQI 204 (663)
Q Consensus 169 a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~ 204 (663)
......++.+++..|+.++..++.+.+.++.+++.+
T Consensus 80 L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l 115 (138)
T 3hnw_A 80 LSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKEL 115 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555555555555555554433
No 92
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=27.78 E-value=3.5e+02 Score=26.65 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 006056 144 ARDKLKKKIATYQEGVLLRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQ 203 (663)
Q Consensus 144 ~r~~~~~~~~~~~~G~~~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~ 203 (663)
|....++|+......+..-.+|-.. +..++.++..|+.+...|+.....++....-
T Consensus 99 Wk~lAE~RR~AL~eaLeEN~~Lh~~----ie~l~eEi~~LkeEn~eLkeLae~~q~la~v 154 (209)
T 2wvr_A 99 WKEVAEKRRKALYEALKENEKLHKE----IEQKDNEIARLKKENKELAEVAEHVQYMAEL 154 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555556666665555444 5556677888888888888888777776443
No 93
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=26.60 E-value=1.2e+02 Score=20.85 Aligned_cols=13 Identities=38% Similarity=0.342 Sum_probs=5.0
Q ss_pred HHhHHHHHHHHHH
Q 006056 180 LSNLKNEEKILKG 192 (663)
Q Consensus 180 l~~L~~e~~~le~ 192 (663)
+..|++++..|+-
T Consensus 11 iaalkkeiaalkf 23 (33)
T 4dzn_A 11 IAALKKEIAALKF 23 (33)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 94
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=25.65 E-value=1.3e+02 Score=20.68 Aligned_cols=21 Identities=33% Similarity=0.333 Sum_probs=11.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHH
Q 006056 180 LSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 180 l~~L~~e~~~le~~~~~l~~~ 200 (663)
+..|++++..|+.++..|+-+
T Consensus 4 iaalkqeiaalkkeiaalkfe 24 (33)
T 4dzn_A 4 IAALKQEIAALKKEIAALKFE 24 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455566665555555555443
No 95
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=23.97 E-value=3.4e+02 Score=23.13 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 006056 144 ARDKLKKKIATYQEGVLLRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLK 198 (663)
Q Consensus 144 ~r~~~~~~~~~~~~G~~~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~ 198 (663)
|....++|+......+..-.+|-.. ...++.++..|+.+...|+.....++
T Consensus 30 Wk~lAE~RR~AL~eaL~EN~~Lh~~----ie~l~eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 30 WKEVAEKRRKALYEALKENEKLHKE----IEQKDNEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555566666666555444 45556677777777777777666554
No 96
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=23.82 E-value=2.9e+02 Score=23.25 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 006056 144 ARDKLKKKIATYQEGVLLRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKE 202 (663)
Q Consensus 144 ~r~~~~~~~~~~~~G~~~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke 202 (663)
|+...++++.....+++...++-.. ...++.+|..|+.+...|+.....++...+
T Consensus 18 Wk~lAE~RR~AL~eaL~EN~~Lh~~----ie~~~eEi~~LkeEN~~L~el~~~~~~lae 72 (79)
T 2zxx_A 18 WKEVAEQRRKALYEALKENEKLHKE----IEQKDSEIARLRKENKDLAEVAEHVQYMAE 72 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555566666666665444 444555666777776666666655555433
No 97
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=22.89 E-value=1.1e+03 Score=32.33 Aligned_cols=13 Identities=8% Similarity=0.090 Sum_probs=5.0
Q ss_pred HHHHHHHHHhHHH
Q 006056 173 LVKDEAELSNLKN 185 (663)
Q Consensus 173 ~~e~~~~l~~L~~ 185 (663)
..+++++|..++.
T Consensus 1936 V~~l~~~L~~~~~ 1948 (3245)
T 3vkg_A 1936 VKDLQVSLAQKNR 1948 (3245)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 98
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=22.54 E-value=3.6e+02 Score=22.97 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=7.8
Q ss_pred HHHhHHHHHHHHHHHHHHH
Q 006056 179 ELSNLKNEEKILKGLVQQL 197 (663)
Q Consensus 179 ~l~~L~~e~~~le~~~~~l 197 (663)
+|..|+..|...+..+..|
T Consensus 59 ei~~le~~i~rhk~~i~~l 77 (84)
T 1gmj_A 59 EIERLQKEIERHKQSIKKL 77 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3344444444444444444
No 99
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=22.23 E-value=1.2e+02 Score=23.64 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=8.4
Q ss_pred HhHHHHHHHHHHHHHHHHHH
Q 006056 181 SNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 181 ~~L~~e~~~le~~~~~l~~~ 200 (663)
..|+.+..+|+.+++.|+.+
T Consensus 22 eaLk~E~~eLk~k~~~L~~~ 41 (53)
T 2yy0_A 22 ELLRLELAEMKEKYEAIVEE 41 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 100
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=22.20 E-value=2.1e+02 Score=20.67 Aligned_cols=27 Identities=26% Similarity=0.323 Sum_probs=15.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 006056 175 KDEAELSNLKNEEKILKGLVQQLKERK 201 (663)
Q Consensus 175 e~~~~l~~L~~e~~~le~~~~~l~~~k 201 (663)
+++.++.+|-.+...|+.++.+|+...
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 344555556666666666666655543
No 101
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=21.89 E-value=3.6e+02 Score=23.16 Aligned_cols=34 Identities=12% Similarity=0.301 Sum_probs=18.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006056 173 LVKDEAELSNLKNEEKILKGLVQQLKERKEQIEK 206 (663)
Q Consensus 173 ~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~e~ 206 (663)
..++..+|..|+++...+...+..++.+.+.+..
T Consensus 20 E~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 20 EERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 4444445555555555555555555555544444
No 102
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=21.86 E-value=3.8e+02 Score=23.03 Aligned_cols=28 Identities=11% Similarity=0.163 Sum_probs=11.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 006056 174 VKDEAELSNLKNEEKILKGLVQQLKERK 201 (663)
Q Consensus 174 ~e~~~~l~~L~~e~~~le~~~~~l~~~k 201 (663)
.....+...++.++..|..++..++..+
T Consensus 33 k~~e~~~~~~E~Ei~sL~kk~~~lE~el 60 (101)
T 3u1c_A 33 KAAEERSKQLEDDIVQLEKQLRVTEDSR 60 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444444433
No 103
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=21.74 E-value=3.4e+02 Score=22.33 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006056 146 DKLKKKIATYQEGVLLRKKEIEQAKQNLVKDEAELSNLKNEEKILKGLVQQLKERKEQIEK 206 (663)
Q Consensus 146 ~~~~~~~~~~~~G~~~R~~li~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~e~ 206 (663)
.....+......-++.......++......++.++..|+.++...+..+..+...++.+++
T Consensus 16 d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeaek 76 (81)
T 1ic2_A 16 ENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADK 76 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 104
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=21.62 E-value=2.8e+02 Score=24.23 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 167 EQAKQNLVKDEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 167 ~~a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
..+.....+++.+|+.|.++|..++.....++..
T Consensus 43 ~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~L 76 (96)
T 1t3j_A 43 QQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLL 76 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3444455556666666666665555544444443
No 105
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=21.07 E-value=3e+02 Score=21.50 Aligned_cols=10 Identities=40% Similarity=0.524 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 006056 183 LKNEEKILKG 192 (663)
Q Consensus 183 L~~e~~~le~ 192 (663)
|+..+..|+.
T Consensus 27 Le~~v~~L~~ 36 (62)
T 1jnm_A 27 LEEKVKTLKA 36 (62)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 106
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=21.01 E-value=3.2e+02 Score=21.72 Aligned_cols=27 Identities=11% Similarity=0.137 Sum_probs=11.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 006056 173 LVKDEAELSNLKNEEKILKGLVQQLKE 199 (663)
Q Consensus 173 ~~e~~~~l~~L~~e~~~le~~~~~l~~ 199 (663)
+...+..+..|+.++..|+..-..|..
T Consensus 25 R~RK~~~~~~Le~~v~~L~~eN~~L~~ 51 (63)
T 2dgc_A 25 RARKLQRMKQLEDKVEELLSKNYHLEN 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444443333333
No 107
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=21.01 E-value=3.8e+02 Score=22.66 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 006056 169 AKQNLVKDEAELSNLKNEEKILKGLVQQLKE 199 (663)
Q Consensus 169 a~~~~~e~~~~l~~L~~e~~~le~~~~~l~~ 199 (663)
|...+.-++.++.+|+.+...|....++++.
T Consensus 18 avdtI~lLqmEieELKekN~~L~~e~~e~~~ 48 (81)
T 2jee_A 18 AIDTITLLQMEIEELKEKNNSLSQEVQNAQH 48 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444444444444444444444444433
No 108
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=20.56 E-value=98 Score=27.47 Aligned_cols=47 Identities=4% Similarity=0.048 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhhhhhccceEEeecCeEE
Q 006056 504 VRKEYDESSDKLSKIQSRISSLTQKLKHEFGPEKEFYSFYGHCFESKQNKYV 555 (663)
Q Consensus 504 ar~~~~~~e~~l~~l~~~i~~~~~~L~~d~G~~~~~~~L~~~C~~~~~g~Yt 555 (663)
+++++..+++++..|+.++..++..+.. .-|....+.||.+....-+
T Consensus 2 ~~~~l~~l~~~~~~l~~~l~~l~~~~~~-----~~w~~~~~~Cy~~~~~~~t 48 (149)
T 1rtm_1 2 IEVKLANMEAEINTLKSKLELTNKLHAF-----SMGKKSGKKFFVTNHERMP 48 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTCCTTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCeEEeCCEEEEEeCCCCC
Confidence 4566777777888888888777765322 2356667889887644333
No 109
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=20.25 E-value=2.1e+02 Score=20.68 Aligned_cols=26 Identities=31% Similarity=0.351 Sum_probs=14.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006056 175 KDEAELSNLKNEEKILKGLVQQLKER 200 (663)
Q Consensus 175 e~~~~l~~L~~e~~~le~~~~~l~~~ 200 (663)
+++.++++|-.+...|+.++..|+..
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34445555555555555555555544
No 110
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=20.14 E-value=3.9e+02 Score=22.47 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=21.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006056 173 LVKDEAELSNLKNEEKILKGLVQQLKERKEQIEK 206 (663)
Q Consensus 173 ~~e~~~~l~~L~~e~~~le~~~~~l~~~ke~~e~ 206 (663)
..++..+|..|+.++..|...++++.-..+.+.+
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~ 55 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVE 55 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4456666777777777777777766666554443
Done!