BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006057
(663 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/673 (63%), Positives = 492/673 (73%), Gaps = 39/673 (5%)
Query: 1 MTVEHVNG---DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN 57
MTVE G DQFP G+RVLAVDDDPTCLL+LET LRRCQYHVTTTSQAI+ALK+LREN
Sbjct: 1 MTVEQGAGEAKDQFPIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLREN 60
Query: 58 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKP 117
KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS DPKLVMKGITHGACDYLLKP
Sbjct: 61 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKP 120
Query: 118 VRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQN 177
VRIEELKNIWQHV+RRKK+D KDQNN DNQDK GSG+A +DQ KLNKKRKDQN
Sbjct: 121 VRIEELKNIWQHVIRRKKVDNKDQNNFDNQDKLPRGSGEA----TADQ--KLNKKRKDQN 174
Query: 178 EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEK 237
EDED++ DE H +EDPTTQKKPRVVWSVELHRKFVAAVNQLG+DKAVPKKILDLMNVEK
Sbjct: 175 EDEDEDRDEHGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEK 234
Query: 238 LTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPG 297
LTRENVASHLQKYRLYLKRIS VANQQANMVAALGSSD SYL+M S GLG + + G G
Sbjct: 235 LTRENVASHLQKYRLYLKRISTVANQQANMVAALGSSDASYLQMGS--GLG-FQGIAGAG 291
Query: 298 QFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLP 357
QF N+TFR P SGMLGRLN+PAGLGM GLPS G+I + Q + +++N+Q F A+ P
Sbjct: 292 QFHNATFRPLPPSGMLGRLNSPAGLGMRGLPSPGVIQLGQLQGTGHSSNNQSHFQMAVHP 351
Query: 358 GSHSGNILQGMPTSLELDQLQLNKNITSISELP-NTKDNTTFHVSSGFPDARIGFGRSTN 416
G ++GN+LQGMPTSLELDQ+Q NK +T I ELP + D T F VS GF D +I G S +
Sbjct: 352 G-NAGNVLQGMPTSLELDQIQSNKGVTYIRELPTDINDATAFSVSGGFSDTKIMVGSSNS 410
Query: 417 PLLDVNNNPLFLEGHPQEAHSNKMFGNQS---LMSLNSGSSSRLPDHGRCNDNWSSAVQS 473
L +N PL LEG+ Q A K FG S + SL+SG SS LPD GRCNDNWSSAVQS
Sbjct: 411 SFLGASNKPLMLEGNTQGAQDGKEFGKHSSLTVASLDSGFSSHLPDPGRCNDNWSSAVQS 470
Query: 474 SGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQ 533
+G+Q SF+L ++Q TLHP + RD++STM L GN+ D+SS+ L Q+ KADLQ
Sbjct: 471 NGVQSTSFALNDCFRQTTLHPNNSRDSMSTMGLQNGNNAPDISSISTLPIHLQESKADLQ 530
Query: 534 FQAV---------------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNK 572
Q QD+ SN + S +N+A I G +G LD
Sbjct: 531 CQITSIRSNAGQIINNAPQGWDDQRQDSMYHSNAVHSSVNTANPIPGTGTLMGHSLDPKN 590
Query: 573 TFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVD 632
T FHR+ F+S Q+NF+D MK N+V+ SM+ EGY+M QQK Q SY+S +
Sbjct: 591 TIFHRTTSFNSTRQTNFIDMPLMKHNDVENLSMEILMRSNEGYVMAQQKLQSSYVSDNFG 650
Query: 633 SLEDLFMSSMVKE 645
SLEDL + MVK+
Sbjct: 651 SLEDL-ANVMVKQ 662
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/681 (60%), Positives = 498/681 (73%), Gaps = 30/681 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDPTCL LL+TLLRRCQYHVTTTSQAITALK+LRENKN+FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS N DPKLVMKGITHGACDYLLKPVRIE+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+RR++ D +DQNNSD++DK P G + GN D +GKLNKKRKDQNED+D+E+D
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPD-HGKLNKKRKDQNEDDDEEND 190
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
E+ H++EDP++QKKPRVVWSVELHRKFVAAVNQLGID+AVPKKILDLMNVEKLTRENVAS
Sbjct: 191 ENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVAS 250
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRISCVANQQANMVAALGS+D +YL S+NGLGN++ + G GQ NSTFR
Sbjct: 251 HLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNSTFR 308
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
SFP SGMLGRLN P+G+GMH L SS M+ + H QNS N N GKF P LLPG+ +G IL
Sbjct: 309 SFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPINSGGKFQPVLLPGNQNGIIL 368
Query: 366 QGMPTSLELDQLQLNKNITSISELPNT-KDNTTFHVSSGFPDARIGFGRSTNPLLDVNNN 424
QGMP SLEL+QLQ NK I + EL T D+T F SSGFPD ++ RS++ LL N+
Sbjct: 369 QGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFPDTKMTSSRSSSSLLVAANS 428
Query: 425 PLFLEGHPQEAHSNKMFGNQ-SLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSL 483
PL L+GH QE NQ S LN+ S PDHGRCNDNWS+AVQ S IQ +SF L
Sbjct: 429 PLMLQGHSQENQRRGGLRNQNSATLLNAELPSSFPDHGRCNDNWSTAVQPSAIQSSSFPL 488
Query: 484 GGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCR 543
+KQ TLHP +LRDN+S++ L G + DVS + + D + DL+ QA+ +
Sbjct: 489 SDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTDLECQAMTISSNS 548
Query: 544 SNVM-FSP--------------------LNSAVSINGDVGPLGQCLDTNKTFFHRSNEFD 582
+M +SP NS + G +G Q LD T R+ +F+
Sbjct: 549 VKIMNYSPKVWDDHKHKLSHHSSLGCSSANSLIPAPGVMGTFDQGLDLKNTISDRNMDFN 608
Query: 583 SLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSM 642
+G+SNFV+ M+ N V+ S+ + LK+G +GQ+K Q SY S +V SLEDL +S+M
Sbjct: 609 LMGESNFVNPLPMQQNAVEESASDTALQLKQGCTLGQRKPQSSYASNNVGSLEDL-VSAM 667
Query: 643 VKEEQDKVLVPEGNFGCSSYS 663
+K+EQDK + EG+ G +YS
Sbjct: 668 MKQEQDKTTLMEGDLGYDAYS 688
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/663 (61%), Positives = 486/663 (73%), Gaps = 30/663 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDPTCL LL+TLLRRCQYHVTTTSQAITALK+LRENKN+FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS N DPKLVMKGITHGACDYLLKPVRIE+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+RR++ D +DQNNSD++DK P G + GN D +GKLNKKRKDQNED+D+E+D
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPD-HGKLNKKRKDQNEDDDEEND 190
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
E+ H++EDP++QKKPRVVWSVELHRKFVAAVNQLGID+AVPKKILDLMNVEKLTRENVAS
Sbjct: 191 ENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVAS 250
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRISCVANQQANMVAALGS+D +YL S+NGLGN++ + G GQ NSTFR
Sbjct: 251 HLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNSTFR 308
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
SFP SGMLGRLN P+G+GMH L SS M+ + H QNS N N GKF P LLPG+ +G IL
Sbjct: 309 SFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPINSGGKFQPVLLPGNQNGIIL 368
Query: 366 QGMPTSLELDQLQLNKNITSISELPNT-KDNTTFHVSSGFPDARIGFGRSTNPLLDVNNN 424
QGMP SLEL+QLQ NK I + EL T D+T F SSGFPD ++ RS++ LL N+
Sbjct: 369 QGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFPDTKMTSSRSSSSLLVAANS 428
Query: 425 PLFLEGHPQEAHSNKMFGNQ-SLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSL 483
PL L+GH QE NQ S LN+ S PDHGRCNDNWS+AVQ S IQ +SF L
Sbjct: 429 PLMLQGHSQENQRRGGLRNQNSATLLNAELPSSFPDHGRCNDNWSTAVQPSAIQSSSFLL 488
Query: 484 GGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCR 543
+KQ TLHP +LRDN+S++ L G + DVS + + D + DL+ QA+ +
Sbjct: 489 SDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTDLECQAMTISSNS 548
Query: 544 SNVM-FSP--------------------LNSAVSINGDVGPLGQCLDTNKTFFHRSNEFD 582
+M +SP NS + G +G Q LD T R+ +F+
Sbjct: 549 VKIMNYSPKVWDDHKHKLSHHSSLGCSSANSLIPAPGVMGTFDQGLDLKNTISDRNMDFN 608
Query: 583 SLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSM 642
+G+SNFV+ M+ N V+ S+ + LK+G +GQ+K Q SY S +V SLEDL +S+M
Sbjct: 609 LMGESNFVNPLPMQQNAVEESASDTALQLKQGCTLGQRKPQSSYASNNVGSLEDL-VSAM 667
Query: 643 VKE 645
+K+
Sbjct: 668 MKQ 670
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/671 (62%), Positives = 487/671 (72%), Gaps = 42/671 (6%)
Query: 1 MTVEH----VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRE 56
MTVE N DQFP G+RVLAVDDDPTCLLLLETLLRRCQY+VTTTSQAITAL++LRE
Sbjct: 1 MTVEQGIGDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRE 60
Query: 57 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLK 116
NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS NGDPKLVMKGITHGAC YLLK
Sbjct: 61 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLK 120
Query: 117 PVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQ 176
PVRIEELK IWQHV+RRKK D KD+N+SDN+DKP+ GS +A DQ KLNKKRKDQ
Sbjct: 121 PVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAV----PDQ--KLNKKRKDQ 174
Query: 177 N----EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDL 232
N ED D+++DED+H +EDPTTQKKPRVVWS+ELHRKFVAAVNQLG+DKAVPKKILDL
Sbjct: 175 NGDDDEDHDEDEDEDEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDKAVPKKILDL 234
Query: 233 MNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHT 292
MNVEKLTRENVASHLQKYR YLKRIS VANQQANMVAALGSSD SYL+M+S++GLG H+
Sbjct: 235 MNVEKLTRENVASHLQKYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSGLG-LHS 293
Query: 293 VGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFH 352
+ G QF ++ FRS P+SGML RLN+PA LG+HGLPS G+I + H Q + + N F
Sbjct: 294 LAGSVQFHSTPFRSLPSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHMANGLSHFQ 353
Query: 353 PALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNT-TFHVSSGFPDARIGF 411
P PG ++GNILQGMP LELDQ+Q NK + I ELP D+T +F VSSG + +I
Sbjct: 354 PVGHPG-NNGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTNMKIIA 412
Query: 412 GRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLM---SLNSGSSSRLPDHGRCNDNWS 468
G S +P + V+N L LEGH Q + G QS + SLN G SS PDHGR NDNWS
Sbjct: 413 GSSNSPFVGVSNKHLMLEGHDQGLQDGQKSGKQSSLSAGSLNPGYSSHFPDHGRRNDNWS 472
Query: 469 SAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDP 528
+AVQS+G Q +SF+L +KQ TLHP +RD +STMAL N+PCDVSS+ L QD
Sbjct: 473 NAVQSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNNPCDVSSVSTLPIHLQDS 532
Query: 529 KADLQFQA----------------------VQDAPCRSNVMFSPLNSAVSINGDVGPLGQ 566
KADL + QD P SN + + +NSA ING+ P G
Sbjct: 533 KADLPCRVGVATVSNAGQLINNGSLGWDDHRQDDPYHSNGLSNSINSAFPINGNGSPNGF 592
Query: 567 CLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSY 626
LD N FF R+ F S G SNFVD MK NEV+ S+M+ K+GYL+GQ+K Q S+
Sbjct: 593 NLDPNNLFFQRTTSFISTGPSNFVDTSLMKHNEVECSAMETLVRSKDGYLLGQEKPQDSF 652
Query: 627 ISTSVDSLEDL 637
+ + SLEDL
Sbjct: 653 VLNNFGSLEDL 663
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/681 (55%), Positives = 469/681 (68%), Gaps = 37/681 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+G+RVLAVDDDPTCLL+LETLLRRCQYHVTTT+QA+ ALKLLRENKNKFD+VISDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HV+RRKK D KD+ NS NQD+P + +G+ ++D NGK NKKRKDQN +EDD+ D
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPDSENGEE----SADPNGKFNKKRKDQNYNEDDDQDYGQ 187
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
N +D +TQKKPRVVWSVELHRKFV AVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ
Sbjct: 188 DN-DDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 246
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFP 308
KYRLYLKRISCVANQQANMV AL S+DPSYLR+ S+ G+GN+H++ GP QF N+++RS P
Sbjct: 247 KYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQFPNTSYRSIP 306
Query: 309 ASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGM 368
+GM GRLN+PA +GMHGL S G + + N N++NDQ F P +L G+ SGNI +GM
Sbjct: 307 TTGMFGRLNSPACMGMHGLSSPGTVQL---GNLSNSSNDQSTFQPIVLSGNRSGNIFRGM 363
Query: 369 PTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFL 428
P E+DQLQ K+ T + L + D T S G P+ + +NPLL + N+P
Sbjct: 364 PEPSEIDQLQHVKHGTHVDNLSSAFDERTVFPSIGLPNGNMSSSTLSNPLLGLTNDPSIP 423
Query: 429 EGHPQEAHSNKMFGNQSLMSLNSGSSSRLP---DHGRCN-DNWSSAVQSSGIQPNSFSLG 484
E E + + FG QS +S+ S +S D+ RC DNWS+AV SS + N+
Sbjct: 424 EAQHHEVNGGRKFGTQSSISVVSSNSDSPRPSLDNVRCTGDNWSNAVHSSRVHLNTIPSA 483
Query: 485 GDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAV------- 537
T + G LRDN +T AL IGN D+SS+ LS + + + D Q QA
Sbjct: 484 NLSNVATSYHGQLRDN-TTSALHIGNCLSDISSITSLSTQSHESRIDSQRQAATTSNRFD 542
Query: 538 ---------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFD 582
+DA + + S NS + +NG L + L+ F S +F+
Sbjct: 543 QLISKVPVQDWNDHKEDAYYHTTMACSSSNSLIPVNGAAETLSKRLENPNAIFSGSKDFN 602
Query: 583 SLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMG-QQKTQGSYISTSVDSLEDLFMSS 641
+ GQ+N +DH ++ ++ ++S+M+ LK+GYL QQK Q + S++ SLED+ +
Sbjct: 603 ATGQANVLDHAMVEHDQFKKSNMETPLMLKQGYLYDHQQKMQSRFSSSNCGSLEDI-ACA 661
Query: 642 MVKEEQDKVLVPEGNFGCSSY 662
M+K+EQD + EG FGC +Y
Sbjct: 662 MMKQEQDDGKLLEGEFGCDNY 682
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/681 (55%), Positives = 469/681 (68%), Gaps = 37/681 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+G+RVLAVDDDPTCLL+LETLLRRCQYHVTTT+QA+ ALKLLRENKNKFD+VISDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HV+RRKK D KD+ NS NQD+P + +G+ ++D NGK N KRKDQN +EDD+ D
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPDSENGEE----SADPNGKFNXKRKDQNYNEDDDQDYGQ 187
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
N +D +TQKKPRVVWSVELHRKFV AVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ
Sbjct: 188 DN-DDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 246
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFP 308
KYRLYLKRISCVANQQANMV AL S+DPSYLR+ S+ G+GN+H++ GP QF N+++RS P
Sbjct: 247 KYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQFPNTSYRSIP 306
Query: 309 ASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGM 368
+GM GRLN+PA +GMHGL S G + + N N++NDQ F P +L G+ SGNI +GM
Sbjct: 307 TTGMFGRLNSPACMGMHGLSSPGTVQL---GNLSNSSNDQSTFQPIVLSGNRSGNIFRGM 363
Query: 369 PTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFL 428
P E+DQLQ K+ T + L + D T S G P+ + +NPLL + N+P
Sbjct: 364 PEPSEIDQLQHVKHGTHVDNLSSAFDERTVFPSIGLPNGNMSSNTLSNPLLGLTNDPSIP 423
Query: 429 EGHPQEAHSNKMFGNQSLMSLNSGSSSRLP---DHGRCN-DNWSSAVQSSGIQPNSFSLG 484
E E + + FG QS +S+ S +S D+ RC DNWS+AV SS + N+ G
Sbjct: 424 EAQHHEVNGGRKFGTQSSISVVSSNSDSPRPSLDNVRCTGDNWSNAVHSSRVHLNTIPSG 483
Query: 485 GDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAV------- 537
T + G LRDN +T AL IGN D+SS+ LS + + + D Q QA
Sbjct: 484 NLSNVATSYHGQLRDN-TTSALHIGNCLSDISSITSLSTQSHESRIDSQRQAATTSNRFD 542
Query: 538 ---------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFD 582
+DA + + S NS + +NG L + L+ F S +F+
Sbjct: 543 QLISKVPVQDWNDHKEDAYYHTTMACSSSNSLIPVNGAAETLSKRLENPNAIFSGSKDFN 602
Query: 583 SLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMG-QQKTQGSYISTSVDSLEDLFMSS 641
+ GQ+N +DH ++ ++ ++S+M+ LK+GYL QQK Q + S++ SLED+ +
Sbjct: 603 ATGQANVLDHAMVEHDQFKKSNMETPLMLKQGYLYDHQQKMQSRFSSSNCGSLEDI-ACA 661
Query: 642 MVKEEQDKVLVPEGNFGCSSY 662
M+K+EQD + EG FGC +Y
Sbjct: 662 MMKQEQDDGKLLEGEFGCDNY 682
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/670 (61%), Positives = 479/670 (71%), Gaps = 47/670 (7%)
Query: 1 MTVEH----VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRE 56
MTVE N DQFP G+RVLAVDDDPTCLLLLETLLRRCQY+VTTTSQAITAL++LRE
Sbjct: 1 MTVEQGIGDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRE 60
Query: 57 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLK 116
NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS NGDPKLVMKGITHGAC YLLK
Sbjct: 61 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLK 120
Query: 117 PVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQ 176
PVRIEELK IWQHV+RRKK D KD+N+SDN+DKP+ GS +A DQ KLNKKRKDQ
Sbjct: 121 PVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAV----PDQ--KLNKKRKDQ 174
Query: 177 N--EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
N EDED ++DED+H +EDPTTQKKPRVVWSVELHRKFVAAVNQLG+DKAVPKKILDLMN
Sbjct: 175 NGDEDEDHDEDEDEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMN 234
Query: 235 VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVG 294
VEKLTREN KYR YLKRIS VANQQANMVAALGSSD SYL+M+S++ LG H++
Sbjct: 235 VEKLTREN------KYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSVLG-LHSLA 287
Query: 295 GPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPA 354
G QF ++ FRS +SGML RLN+PA LG+HGLPS G+I + H Q + +T N F P
Sbjct: 288 GSVQFHSTPFRSLQSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHTANGLSHFQPV 347
Query: 355 LLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNT-TFHVSSGFPDARIGFGR 413
G++ GNILQGMP LELDQ+Q NK + I ELP D+T +F VSSG D +I G
Sbjct: 348 GHRGNN-GNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTDMKIIAGS 406
Query: 414 STNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMS---LNSGSSSRLPDHGRCNDNWSSA 470
S +P + V+N L LEGH Q + G QS +S LN G SS PDHGRCNDNWS+A
Sbjct: 407 SNSPFVGVSNKHLMLEGHGQGLQDGQKSGKQSSLSAGSLNPGYSSHFPDHGRCNDNWSNA 466
Query: 471 VQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKA 530
V S+G Q +SF+L +KQ TLHP +RD +STMAL N+PCDVSS+ L QD KA
Sbjct: 467 VPSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNNPCDVSSVSTLPMHLQDSKA 526
Query: 531 DLQFQA-----------------------VQDAPCRSNVMFSPLNSAVSINGDVGPLGQC 567
DL + QD P SN + + +NSA ING+ P G
Sbjct: 527 DLPCRVGVATVSSNAGQLINNGSLGWDDRRQDDPYHSNGLSNSINSAFPINGNGSPNGFN 586
Query: 568 LDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYI 627
LD N FF R+ F S G SNFVD MK NEV+ S+M+ K+GYL+GQ+K Q S +
Sbjct: 587 LDPNNLFFQRTTSFISTGPSNFVDTSLMKHNEVECSAMETLVRSKDGYLLGQEKPQDSSV 646
Query: 628 STSVDSLEDL 637
S + SLEDL
Sbjct: 647 SNNFGSLEDL 656
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/681 (58%), Positives = 479/681 (70%), Gaps = 56/681 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDPTCL LL+TLLRRCQYHVTTTSQAITALK+LRENKN+FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS N DPKLVMKGITHGACDYLLKPVRIE+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+RR++ D +DQNNSD++DK P G + GN D +GKLNKKRKDQNED+D+E+D
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPD-HGKLNKKRKDQNEDDDEEND 190
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
E+ H++EDP++QKKPRVVWSVELHRKFVAAVNQLGID+AVPKKILDLMNVEKLTRENVAS
Sbjct: 191 ENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVAS 250
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRISCVANQQANMVAALGS+D +YL S+NGLGN++ + G GQ NSTFR
Sbjct: 251 HLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNSTFR 308
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
SFP SGMLGRLN P+G+GMH L SS M+ + H QNS N N
Sbjct: 309 SFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPIN------------------- 349
Query: 366 QGMPTSLELDQLQLNKNITSISELPNT-KDNTTFHVSSGFPDARIGFGRSTNPLLDVNNN 424
+L+QLQ NK I + EL T D+T F SSGFPD ++ RS++ LL N+
Sbjct: 350 -------KLEQLQHNKGIIRVGELSTTIGDSTVFPASSGFPDTKMTSSRSSSSLLVAANS 402
Query: 425 PLFLEGHPQEAHSNKMFGNQ-SLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSL 483
PL L+GH QE NQ S LN+ S PDHGRCNDNWS+AVQ S IQ +SF L
Sbjct: 403 PLMLQGHSQENQRRGGLRNQNSATLLNAELPSSFPDHGRCNDNWSTAVQPSAIQSSSFPL 462
Query: 484 GGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCR 543
+KQ TLHP +LRDN+S++ L G + DVS + + D + DL+ QA+ +
Sbjct: 463 SDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTDLECQAMTISSNS 522
Query: 544 SNVM-FSP--------------------LNSAVSINGDVGPLGQCLDTNKTFFHRSNEFD 582
+M +SP NS + G +G Q LD T R+ +F+
Sbjct: 523 VKIMNYSPKVWDDHKHKLSHHSSLGCSSANSLIPAPGVMGTFDQGLDLKNTISDRNMDFN 582
Query: 583 SLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSM 642
+G+SNFV+ M+ N V+ S+ + LK+G +GQ+K Q SY S +V SLEDL +S+M
Sbjct: 583 LMGESNFVNPLPMQQNAVEESASDTALQLKQGCTLGQRKPQSSYASNNVGSLEDL-VSAM 641
Query: 643 VKEEQDKVLVPEGNFGCSSYS 663
+K+EQDK + EG+ G +YS
Sbjct: 642 MKQEQDKTTLMEGDLGYDAYS 662
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/709 (53%), Positives = 474/709 (66%), Gaps = 48/709 (6%)
Query: 1 MTVEHVNG---------DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITAL 51
MTVE G D FP G+RVLAVDDDPTCL+LL+ LLRRCQY VTTT+QAITAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 52 KLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGAC 111
K+LRENKN FDLVISDV MPDMDGFKLLELVGLEMDLPVIMLS + DPKLVM+GITHGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 112 DYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQA-EG---MGNSDQNG 167
DYLLKPVRIEELKNIWQHV+RRKKID+KDQN S +QD + G+ EG N+DQNG
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGGEGPPSSSNADQNG 180
Query: 168 KLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
KLN+KRKDQNEDE++E +E+ +EDP++QKKPRVVWSVELHRKFVAAVNQLGI+KAVPK
Sbjct: 181 KLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPK 240
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGL 287
+ILDLMNVE LTRENVASHLQKYRLYLKRISCVA QQANMVAA G+ D SY+RM S++G
Sbjct: 241 RILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGF 300
Query: 288 GNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTND 347
G++ + GPG+ ++ S+P SGMLGRLN+PAGL + GL SSG+I HAQNS N+ N
Sbjct: 301 GDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSGLIQTGHAQNSSNSVNT 360
Query: 348 QGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNI-TSISELPNTKDNTTFHVSSGFPD 406
GK P +LP + S ++ QG+PTSLELDQLQ K I T E + + T F ++GFPD
Sbjct: 361 HGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFPD 420
Query: 407 ARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQS---LMSLN--------SGSSS 455
+R+ S+N L + +NPL L+ +PQ+ NQS ++LN SGSS+
Sbjct: 421 SRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSSN 480
Query: 456 RLPDHGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDV 515
L DHGRCN+NW SA+Q S NS L L +LR+++S+ I SP D
Sbjct: 481 FL-DHGRCNENWQSALQLSKFPSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDF 539
Query: 516 SSLHPLSNRFQDPKADLQFQA---------------------VQDAPCRSNVMFSPLNSA 554
S+ L+ +D + ++ Q+ QD SN +F LNS
Sbjct: 540 SATSVLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQDYTQSSNHVFGTLNSI 599
Query: 555 VSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEG 614
+ N +GPL LD N +R + + QSN ++ +EV++S+M E
Sbjct: 600 IPANNVMGPLNHSLDQNNAACNRKMDMPLISQSNASSSSLVQHSEVEKSAMDTKMVSNED 659
Query: 615 YLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
YL+ Q K+Q I S +SL+DL MS+M+K E D+ ++ G FG +YS
Sbjct: 660 YLLEQTKSQDGLIHNSYESLDDL-MSAMIKREHDETMLMNGEFGFDAYS 707
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/707 (52%), Positives = 464/707 (65%), Gaps = 64/707 (9%)
Query: 1 MTVEHVNG---------DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYH----------- 40
MTVE G D FP G+RVLAVDDDPTCL+LL+ LLRRCQY
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLL 60
Query: 41 -----VTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSG 95
VTTT+QAITALK+LRENKN FDLVISDV MPDMDGFKLLELVGLEMDLPVIMLS
Sbjct: 61 LYMNFVTTTNQAITALKMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSS 120
Query: 96 NGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSG 155
+ D KLVM+GITHGACDYLLKPVRIEELKNIWQHV+RRKKID+KDQN S +QD + G
Sbjct: 121 HSDQKLVMRGITHGACDYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADG 180
Query: 156 QA-EG---MGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRK 211
+ EG N+DQNGKLN+KRKDQNEDE++E +E+ +EDP++QKKPRVVWSVELHRK
Sbjct: 181 EGGEGPPSSSNADQNGKLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRK 240
Query: 212 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAAL 271
FVAAVNQLGI+KAVPK+ILDLMNVE LTRENVASHLQKYRLYLKRISCVA QQAN VAA
Sbjct: 241 FVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANXVAAF 300
Query: 272 GSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSG 331
G+ D SY+RM S++G G++ + GPG+ ++ S+P SGMLGRLN+PAGL + GL SSG
Sbjct: 301 GAKDSSYMRMGSLDGFGDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSG 360
Query: 332 MIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNI-TSISELP 390
+I HAQNS N+ N GK P +LP + S ++ QG+PTSLELDQLQ K I T I E
Sbjct: 361 LIQTGHAQNSSNSVNTHGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQIGEFS 420
Query: 391 NTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQS---LM 447
+ + T F ++GFPD+R+ S+N L + +NPL L+ +PQ+ NQS +
Sbjct: 421 SVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAV 480
Query: 448 SLN--------SGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRD 499
+LN SGSS+ L DHGRCN+NW SA+Q S NS L + L +LR+
Sbjct: 481 TLNPEPYTMGVSGSSNFL-DHGRCNENWQSALQLSKFPSNSLPLSEPLNRDPLTTNNLRE 539
Query: 500 NLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQA---------------------VQ 538
++S+ I SP D S+ L+ +D + ++ Q+ Q
Sbjct: 540 HISSTGSHIRRSPIDFSATSXLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQ 599
Query: 539 DAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKIN 598
D SN +F LNS + N +GPL LD N T +R + + QSN ++ +
Sbjct: 600 DYTQSSNHVFGTLNSIIPANNVMGPLNHSLDRNNTACNRKMDMPLISQSNASSSSLVQHS 659
Query: 599 EVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKE 645
EV++S+M E YL+ Q K+Q I S +SL+DL MS+M+K
Sbjct: 660 EVEKSAMDTKMVXNEDYLLEQTKSQDGLIHNSYESLDDL-MSAMIKR 705
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/688 (58%), Positives = 457/688 (66%), Gaps = 130/688 (18%)
Query: 1 MTVEH----VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRE 56
MTVE N DQFP G+RVLAVDDDPTCLLLLETLLRRCQY VTTTSQAITAL +LRE
Sbjct: 1 MTVEQGIGDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRE 60
Query: 57 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLK 116
NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS NGDPKLVMKGITHGACDYLLK
Sbjct: 61 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLK 120
Query: 117 PVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQ 176
PVRIEELKNIWQHV+RR+K D KD+N+SDN+DKP+ GS +A DQ KLNKKRKDQ
Sbjct: 121 PVRIEELKNIWQHVIRRRKYDNKDRNSSDNRDKPNQGSSEAI----PDQ--KLNKKRKDQ 174
Query: 177 NEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
NEDED++ DE++H +EDP TQKKPRV LHRKFVAAVNQLGIDKAVPKKILDLMNVE
Sbjct: 175 NEDEDEDRDENEHENEDPATQKKPRV-----LHRKFVAAVNQLGIDKAVPKKILDLMNVE 229
Query: 237 KLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGP 296
KLTREN KYRLYLKRIS VANQQANMVAALGSSD SYL+M+S+NG+G H + G
Sbjct: 230 KLTREN------KYRLYLKRISTVANQQANMVAALGSSDASYLQMNSMNGMG-LHNLAGS 282
Query: 297 GQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALL 356
GQF N+ FRS P+SGML RLN+PA LG+ GLPS G+I + H Q++ ++ N F P
Sbjct: 283 GQFHNTPFRSLPSSGMLSRLNSPAVLGIRGLPSPGVIRLGHVQSAPHSANGLSHFQPVGH 342
Query: 357 PGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTN 416
PG ++GNILQGMP SLELDQ+Q NK D +I G S +
Sbjct: 343 PG-NNGNILQGMPMSLELDQIQSNK------------------------DMKIIAGSSNS 377
Query: 417 PLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGI 476
P + V+ PL LEGH G SS PDHGRCNDNWS+AVQS+G
Sbjct: 378 PFVGVSGKPLMLEGH--------------------GYSSHFPDHGRCNDNWSNAVQSNG- 416
Query: 477 QPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQA 536
Q TLHP +RD++STMAL N+ CD D KADLQ Q
Sbjct: 417 ------------QSTLHPSSIRDSMSTMALQSRNNHCD------------DSKADLQCQV 452
Query: 537 V---------------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFF 575
QD P +N + + +NSA+ ING+ +GQ LD N F
Sbjct: 453 ATMSSDAGQIINNGQLGWDDHRQDDPYHANGISNSINSAIPINGNGSLVGQSLDPNNMIF 512
Query: 576 HRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLE 635
R+ F S GQSNFVD MK NE +GYL+GQQK Q SY+S + SLE
Sbjct: 513 QRTRSFSSAGQSNFVDTSLMKHNE-------------DGYLLGQQKQQDSYVSNNFGSLE 559
Query: 636 DLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
DL +S M EQDKV +PEG+FGC YS
Sbjct: 560 DL-VSVM---EQDKVKLPEGDFGCGGYS 583
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 367/696 (52%), Positives = 462/696 (66%), Gaps = 54/696 (7%)
Query: 1 MTVEHV---NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN 57
MTVE +GD+FP G+RVLAVDDDPTCLL+LETLLRRCQYH TTT+QAI AL LLRE+
Sbjct: 1 MTVEKKMNDSGDEFPVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREH 60
Query: 58 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKP 117
K+KFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS NGD KLVMKGI+HGACDYLLKP
Sbjct: 61 KDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKP 120
Query: 118 VRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP---HNGSGQAEGMGNSDQNGKLNKKRK 174
VR+EELKNIWQHV+RRKK D+K++N + N DKP + + G GNSD N KL KKRK
Sbjct: 121 VRMEELKNIWQHVIRRKKFDSKEKNKTRNIDKPTSNSSNGLGSSGTGNSDHNEKLTKKRK 180
Query: 175 DQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
++++DE+ E+DH+++DP+ QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN
Sbjct: 181 -DQDEDEDEEQENDHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 239
Query: 235 VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVG 294
VEKLTRENVASHLQKYRLYLKRISCVANQQ NMV ALG +DPSYLRM+SV+G+G+ ++
Sbjct: 240 VEKLTRENVASHLQKYRLYLKRISCVANQQTNMVVALGGADPSYLRMNSVSGVGHIQSIS 299
Query: 295 GPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPA 354
G GQ N+ FRSFP SG++ RLN PAGL +HG P SG++ + +QN N TND KF A
Sbjct: 300 GSGQLHNNAFRSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLKN-TNDNLKFQSA 357
Query: 355 LLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKD-NTTFHVSSGFPDAR--IGF 411
++P + +G + GM S+ LDQLQ NK + S+ L D TTF +S+ PD R I
Sbjct: 358 IVPANQNG--VHGMTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPISNKLPDPRPKITN 415
Query: 412 GRSTNPLLDVNNNPLFLEGHPQEAHSNKMFG--NQSLMSLNSGSSSRLPDHGRCNDNWSS 469
S P + +NN L LE PQ + + S+ S +S S L D GR +DNW+S
Sbjct: 416 SGSHTPDVSFSNNALMLEPRPQGTQGSVRIETLSSSVASQHSEFSLSLLDQGRYSDNWAS 475
Query: 470 AVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPK 529
VQ S IQ NS+ + Q + P DN++++ L GN +S+ LS + D
Sbjct: 476 TVQPSVIQTNSYPPSECFGQTNIPP---TDNMASVPLQGGN--LSGASITSLSRQSYDSM 530
Query: 530 ADLQFQAV----------------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQC 567
D+ + V QDA SN++ +NS +NG P G
Sbjct: 531 TDMHSEGVTFTNRPGHISSNVPYQGWHDNNQDATHHSNIL--SINSLTPVNGAAVPAGHA 588
Query: 568 LDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYI 627
+ HR+ +F N+ D MK + +A S +G +M K+Q S+
Sbjct: 589 --AMNSALHRNLDF------NYCDPLQMKHEGFVELTDEALSKQHQGNIMNLPKSQQSHF 640
Query: 628 STSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
S ++ SLEDL +SSM+K+E DK+ + +GN C++YS
Sbjct: 641 SNNLGSLEDL-VSSMMKQENDKMKLLDGNLICNNYS 675
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 367/675 (54%), Positives = 455/675 (67%), Gaps = 50/675 (7%)
Query: 1 MTVEHV---NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN 57
MTVE +GD+FP G+RVLAVDDDPTCLL+L+TLL+RCQYHVTTT+QAI AL LLRE+
Sbjct: 1 MTVEKKRNDSGDEFPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREH 60
Query: 58 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKP 117
K+KFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS NGD K+VMKGI+HGACDYLLKP
Sbjct: 61 KDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGACDYLLKP 120
Query: 118 VRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQ---AEGMGNSDQNGKLNKKRK 174
VR+EELKNIWQHV+RRKK D+K++N + N DKP + SG + G GNSDQN KL KKRK
Sbjct: 121 VRMEELKNIWQHVIRRKKFDSKEKNKTSNLDKPTSNSGNGLGSSGTGNSDQNEKLTKKRK 180
Query: 175 DQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
DQ+EDED++ + D N EDP+ QKKPRVVWSV+LHRKFVAAVNQLGIDKAVPKKILDLMN
Sbjct: 181 DQDEDEDEDQENDLDN-EDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPKKILDLMN 239
Query: 235 VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVG 294
VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALG +DPSYLRMSSV+G+G+ T+
Sbjct: 240 VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGVADPSYLRMSSVSGVGHVQTLS 299
Query: 295 GPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPA 354
G GQ N+ FRSFP SG++ RLN PAGL +HG P SG++ + +QN +N ND KF
Sbjct: 300 GSGQLHNNNFRSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLNN-ANDHHKFQSV 357
Query: 355 LLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKD-NTTFHVSSGFPDARIGFGR 413
++P + +G +QGM S+ LDQLQ NK + S+ L D TTF + + PD R
Sbjct: 358 IVPVNQNG--VQGMTVSVGLDQLQNNKVVMSVQNLTTVFDAKTTFPIPNKLPDPRPKITN 415
Query: 414 STNPLLDVN--NNPLFLEGHPQEAHSNKMFG--NQSLMSLNSGSSSRLPDHGRCNDNWSS 469
S + DV+ NN L LE PQ + + G + S+ S +S S L D GR +DNW+S
Sbjct: 416 SVSHTSDVHFSNNALMLEPRPQGSQGSVRIGTLSSSVASQHSEFSLSLLDQGRYSDNWTS 475
Query: 470 AVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGN-SPCDVSSLH--------- 519
AVQ S IQ N F ++Q + P DN++++ L GN S ++SL
Sbjct: 476 AVQPSVIQTNFFPPSECFRQTNIPPA---DNMASVPLQGGNLSGPSITSLSRQSHDSMTE 532
Query: 520 ------PLSNRFQDPKADLQFQAV----QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLD 569
+NR +++ FQ QDA SN+M +NS +NG G
Sbjct: 533 MHSEGMTFTNRPGHTSSNVPFQGWDDHNQDATHHSNIM--SINSLTPVNGAAVQAGHA-- 588
Query: 570 TNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYIST 629
+ HR+ +F N+ D MK + + +G M QQK+Q ++ S
Sbjct: 589 ATNSVLHRNLDF------NYCDPLQMKHEGFVELTDETLLKQHQGNTMDQQKSQENHFSN 642
Query: 630 SVDSLEDLFMSSMVK 644
++ SLEDL +SSM+K
Sbjct: 643 NLGSLEDL-VSSMMK 656
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 361/665 (54%), Positives = 463/665 (69%), Gaps = 37/665 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL++LETLLRRCQYHVTTT AITALKLLRENK FDLVISDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDV 73
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS N DPK+VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 129 HVVRRKKIDAKDQNNSDNQDKPH--NGSGQ-AEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+RRKKID+K++N + + DKP+ NG+G+ + G GNSDQNGK +KKRK +++D+E++
Sbjct: 134 HVIRRKKIDSKERNKTSDHDKPNADNGNGRVSAGTGNSDQNGKPSKKRK-DQDEDDEEEN 192
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
ED H++ED +T KKPRVVWSVELHRKFV+AVNQLGIDKAVPKKILDLMNVEKLTRENVAS
Sbjct: 193 EDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 252
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRISCVAN+QAN+VAALG++D SYLRM S++G+G+ T+ GP QF N+ FR
Sbjct: 253 HLQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGPQQFHNNAFR 312
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
FP GM+GRLNA GL MHG+ SS + + HAQN + + ND KF A+ G+ +G +
Sbjct: 313 PFPPGGMIGRLNASVGLNMHGISSSEALQLSHAQNLNKSINDPLKFQSAIACGNQNG--I 370
Query: 366 QGMPTSLELDQLQLNKNITSISELPNTK----DNTTFHVSSGFPD--ARIGFGRSTNPLL 419
QGMP S+ LDQLQ NK + S+ + N D TF VS D ++ G S +P+L
Sbjct: 371 QGMPMSIGLDQLQHNKGV-SVGPIQNMSSLIDDRPTFGVSKKLSDQTQKVTIGCSPSPVL 429
Query: 420 DVNNNPLFLEGHPQEAHSNKMFGN-QSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQP 478
D++NN L L+ + ++ N S+ S +S S L DHGRC+D WSS +QSSG
Sbjct: 430 DISNNDLVLKADSENTQGGGVYENLTSVASQHSQFSLPLLDHGRCSDIWSSPMQSSGT-- 487
Query: 479 NSFSLGGDYKQPTLHPGHLRDNLSTMAL--PIGNSPCDVSSLHPL-SNRFQDPKADLQFQ 535
NS+ TL G+L S +L +SP D+ S + +N ++ FQ
Sbjct: 488 NSYP-----PSETLQGGNLSGQSSITSLFNQSHDSPTDMHSQGLIFTNNLGQMSNNVPFQ 542
Query: 536 AVQDAPCRSNVMFSPLNSAVSINGDVGPLGQC-LDTNKTFFHRSNEFDSLGQSNFVDHFS 594
D SN + + + SI+ + P G +++N ++R+ +F NF +
Sbjct: 543 GWDDNNHDSNYDANVIGN--SIDTLIDPEGHTSINSN---YNRNLDF------NFCNPLQ 591
Query: 595 MKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPE 654
MK + + S + S + GY+M +QK+Q S + ++ SLED F SSM+K++QDKV +
Sbjct: 592 MKHDGIMGLSEENSLKQQYGYIMNRQKSQNSSATNNLGSLED-FASSMMKQKQDKVKFLD 650
Query: 655 GNFGC 659
G++ C
Sbjct: 651 GSYLC 655
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 357/674 (52%), Positives = 441/674 (65%), Gaps = 54/674 (8%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+GD+FP G+RVLAVDDDPTCLL+LETLLRRCQYHVTTTSQAITAL +LRENK+KFDLVIS
Sbjct: 4 SGDRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVIS 63
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLELVGLEMDLPVIMLS GD KLVMKGI+HGACDYLLKPVR+EELKNI
Sbjct: 64 DVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNI 123
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSG---QAEGMGNSDQNGKLNKKRKDQNEDEDDE 183
WQHV+R+KK D K++N + DK + SG ++ G NSD+NGKL KKRKDQ+EDED++
Sbjct: 124 WQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDED 183
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+ + N EDP+ QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD+MNVE +TRENV
Sbjct: 184 KENGNDN-EDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENV 242
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNST 303
ASHLQKYRLYLKRISCVANQQA+MVAALGS+D SYLRM GG G F N+
Sbjct: 243 ASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRM------------GGSGHFHNNA 290
Query: 304 FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGN 363
FRSF SG++G LN P L HG SG++ + ++N +N+ NDQ KF A+ P + N
Sbjct: 291 FRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSCNDQLKFQSAITPVNQ--N 348
Query: 364 ILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTN--PLLDV 421
ILQGMP S+ D LQ +K + S+ L NT TTF + + FPD R F S++ P L +
Sbjct: 349 ILQGMPMSIGFDHLQNSKGVISVQNL-NTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGI 407
Query: 422 NNNPLFLEGHPQEAH----SNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQ 477
+NN L L+ HP+ H + S+ S +S S + D GR NWSS V SGIQ
Sbjct: 408 SNNGLMLDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGGNWSSDVPISGIQ 467
Query: 478 PNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHP----LSNRFQDPKADLQ 533
NSFS ++Q + P DN++++ L G S + +H +N + +L
Sbjct: 468 TNSFSSSECFRQTAVPPS---DNMASLPLQAGYSGGSLPDMHSQGMIFTNSPEYINGNLP 524
Query: 534 FQAV----QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNF 589
FQ QDA SNV +NS +NG V P GQ +S + F
Sbjct: 525 FQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVVPPGQTAT------------ESTLDTKF 572
Query: 590 VDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDK 649
+ MK + +SS ++ QQK S ++ SLE L SSM+ +EQDK
Sbjct: 573 FNPIQMKHAGFAELTECSSSRQSPANIISQQK-----FSNNLGSLEYL-ASSMMGQEQDK 626
Query: 650 VLVPEGNFGCSSYS 663
+ + G+F C +YS
Sbjct: 627 MKLLGGDFICDNYS 640
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 364/678 (53%), Positives = 451/678 (66%), Gaps = 61/678 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL++LETLLRRCQYHVTTT AITAL LLRENK FDLVISDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDV 73
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS N DPK+VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG---MGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+RRKKID+K+QN + + DK ++ SG G GNSDQNGK +KKRKDQ+ED+D+E+D
Sbjct: 134 HVIRRKKIDSKEQNKTSDYDKTNSDSGNGRGSAATGNSDQNGKPSKKRKDQDEDDDEEND 193
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
D N EDP+TQKKPRVVWSVELHRKFV+AVN LGIDKAVPKKILDLMN EKLTRENVAS
Sbjct: 194 TDHDN-EDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRENVAS 252
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRISC AN+QANMVAALG++D SYLRM S++G+G+ T+ GP QF N+ FR
Sbjct: 253 HLQKYRLYLKRISCGANRQANMVAALGTADSSYLRMGSLSGVGHLQTLTGPQQFHNNAFR 312
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
FP GM+GRLN GL HGL SS + + HAQN +N+ ND KF ++ G+ N +
Sbjct: 313 PFPPGGMIGRLNTSVGLNNHGLSSSEALQLSHAQNLNNSINDPLKFQSSIACGNQ--NAI 370
Query: 366 QGMPTSLELDQLQLNKNIT-SISELPNTK----DNTTFHVSSGFPDA--RIGFGRSTNPL 418
QGMP S+ LDQLQ NK ++ S+ + N TF VS+ D ++ G S +P+
Sbjct: 371 QGMPMSIGLDQLQHNKGVSVSVGPIQNMSPLIDARPTFAVSNRLSDQIPKVTMGCSPSPV 430
Query: 419 LDVNNNPLFLEGHPQEAHSNKMFGN-QSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQ 477
LDV+NN L L+ + ++ N S+ S +S S L HGRC+D WSS ++SSG
Sbjct: 431 LDVSNNALVLKADSENTQGRGVYENLTSVASQHSQFSLPLLGHGRCSDIWSSPMRSSGT- 489
Query: 478 PNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAV 537
NS+ TL G+L SS+ LSN+ D + D+ Q +
Sbjct: 490 -NSYP-----PSETLQGGNL---------------SGASSITSLSNQSHDSQTDMHSQGL 528
Query: 538 ----QDAPCRSNVMF---------SPLNSAV---SINGDVGPLGQCLDTNKTFFHRSNEF 581
+NV F S +S V SI+ + P G N T ++R+ +F
Sbjct: 529 IFTNNSGQISNNVPFLGWDDHNHDSSYHSNVIGNSIDSLIDPEGHT-SINST-YNRNLDF 586
Query: 582 DSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSS 641
NF D MK + + S + S + Y+M QQK+Q S ++ SLED F+SS
Sbjct: 587 ------NFCDPLQMKHDGIMGLSDENSLKQQHRYIMNQQKSQNSRAPNNIGSLED-FVSS 639
Query: 642 MVKEEQDKVLVPEGNFGC 659
M+K++QDKV +G++ C
Sbjct: 640 MMKQKQDKVKFLDGSYLC 657
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 344/694 (49%), Positives = 454/694 (65%), Gaps = 64/694 (9%)
Query: 1 MTVEHVNG---DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN 57
MTVE D+FP G+RVLAVDDDP CL +L+TLL++CQY VTTT+QAI ALK+LREN
Sbjct: 1 MTVEDKRSSSEDKFPVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLREN 60
Query: 58 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKP 117
+NK+DLVISDV+MPDMDGFKLLELVGLEMDLPVIMLS + D +LV KG+THGA DYLLKP
Sbjct: 61 RNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKP 120
Query: 118 VRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNS----DQNGKLNKKR 173
VRIEELKNIWQHV+RRKK+ KDQ+ S NQDKP +G+G+ +S DQNGK+N+KR
Sbjct: 121 VRIEELKNIWQHVIRRKKLQPKDQSRSQNQDKPLDGAGEGGQGMSSSGSEDQNGKVNRKR 180
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM 233
KDQ+EDE++E +++ ++ ++P QKKPRVVWSVELHRKFVAAVNQLG+DKAVPKKILDLM
Sbjct: 181 KDQDEDEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLM 240
Query: 234 NVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTV 293
NVE LTRENVASHLQKYRLYLKRIS A+QQANMVAA G D SYLRM+S++G G + T+
Sbjct: 241 NVEGLTRENVASHLQKYRLYLKRISSTASQQANMVAAFGIKDSSYLRMASLDGFGEFRTL 300
Query: 294 GGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHP 353
GPG+ +++ S+ SGMLGRLN+P+GL + G+ SSG++ +Q+ ++ N GK P
Sbjct: 301 SGPGRLSSTSISSYHPSGMLGRLNSPSGLTLRGIASSGLLQPGQSQSLSSSVNTLGKLQP 360
Query: 354 ALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGR 413
LL S N+ QG+P+SLE +QLQ +K+ E D++ F +++ F DAR+ G
Sbjct: 361 TLLHSSQGVNLFQGIPSSLEPNQLQ-SKSSAHFGEFNRNDDSSGFSLTNSFSDARVTIGS 419
Query: 414 STNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNS-----------GSSSRLPDHGR 462
+N ++NP+ L+ HPQ+ + +F QS +S+ S GSS+ L DH R
Sbjct: 420 LSNTATGPSSNPMMLQAHPQQNQNTGVFATQSSLSVPSLNQESFDVGVRGSSNFL-DHSR 478
Query: 463 CNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLS 522
CN++W AVQ S + L + L + RDN+S+ + NSP D SS L+
Sbjct: 479 CNESWQGAVQLSKFS-TTLPLSEPFSHDALSTSNFRDNMSSTNSRMVNSPTDYSSSAVLA 537
Query: 523 NRFQDPKADLQFQ------AVQDA----------------PCRSNVMFSPLNSAVSINGD 560
+ D + D+Q Q VQ P SN FS +N VS NG
Sbjct: 538 SPL-DTRVDMQGQTGFAGNVVQSTSYNSRQRWEEHGQDYNPNLSN-SFSTINPLVSGNGV 595
Query: 561 VGPLGQCLDTNKTFFHRSNEFDS--LGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMG 618
+G L C+D RS +FD+ +GQS S + EV++S ++ E YL+
Sbjct: 596 LGSLSHCID-------RSKKFDAPLVGQS----PSSFQQAEVEKSPLEPKMRSNEDYLLE 644
Query: 619 QQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLV 652
Q K+Q Y +SL+D+ M++M+K V +
Sbjct: 645 QTKSQNGY-----ESLDDI-MNAMIKRVWSNVFL 672
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 338/689 (49%), Positives = 448/689 (65%), Gaps = 45/689 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDDDP CL +LE LLR+CQYHVTTT+QA+ ALK+LREN+NKFDLVISDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDV 72
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPD+DGFKLLELVGLEMDLPVIMLS +GD KLVMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQ-AEGM---GNSDQNGKLNKKRKDQNEDEDDED 184
HVVRRK D++DQN + N++K N +G+ ++G+ ++DQN +L KKRKDQ+E+E+++
Sbjct: 133 HVVRRKNFDSRDQNKASNEEKAPNIAGEGSQGLRSENSADQNKRLGKKRKDQSEEEEEDG 192
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
+E+ EDP+ QKKPRVVWSVELHRKFVAAVNQLG+DKAVPKKILDLMNVE LTRENVA
Sbjct: 193 EENGD-DEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVA 251
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTF 304
SHLQKYRLYLK+ A QQANMVAALG SD SYLRM S++G G++ T G G+ N+T
Sbjct: 252 SHLQKYRLYLKK----AAQQANMVAALGGSD-SYLRMGSIDGYGDFCTSSGSGRITNTTS 306
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNI 364
S+ ++G+ RLN+PA L M + SS +I +QN + + N G P++ P +HS ++
Sbjct: 307 PSYASTGIFSRLNSPAALNMRAISSSALIRPVQSQNINCSLNTLGNIQPSVFPANHSSSL 366
Query: 365 LQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNN 424
LQG+PTS+EL+Q + + T IS+L D++ F V+SGFPD+R N L V+NN
Sbjct: 367 LQGIPTSIELNQSKQSNCTTGISQLSQV-DSSGFAVASGFPDSRATVNGPNNSLPCVSNN 425
Query: 425 PLFLEGHPQEAHSNKMFGNQSLM--------SLNSG--SSSRLPDHGRCNDNWSSAVQSS 474
+ L+G+PQ+ H F NQS + S ++G SSS L D+ RCN+NW +A Q S
Sbjct: 426 HIMLQGNPQQMHGPGAFRNQSSVRAASLCAESFDAGLCSSSNLLDYNRCNENWQNAAQLS 485
Query: 475 GIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQF 534
+S L + L P R N+S I NSP D SS +S +D + +L
Sbjct: 486 KFPAHSLPLCEAFSNDQLPP--TRINVSNSRTHIVNSPVDFSSRMGISVPLEDTRNELAC 543
Query: 535 QA-------------------VQDAPCRSNV--MFSPLNSAVSINGDVGPLGQCLDTNKT 573
Q NV F+P+NS S +G +G L+ N T
Sbjct: 544 QEGLIGNIVKPSSYTPQQRWEEHKLDYNQNVGHSFNPVNSHASSSGVKSSMGHGLNQNNT 603
Query: 574 FFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDS 633
+ +GQ N + EV++ S E Y++ Q K+Q ++ + +
Sbjct: 604 ICSNRVDASLVGQLNGASPSISRCTEVEKFSSDIRLKPNEAYILEQMKSQDGFMQNTFGT 663
Query: 634 LEDLFMSSMVKEEQDKVLVPEGNFGCSSY 662
L+D+ M +MVK EQ+++ + +G G +Y
Sbjct: 664 LDDI-MGAMVKREQNELTLLDGEMGFDAY 691
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 337/712 (47%), Positives = 450/712 (63%), Gaps = 59/712 (8%)
Query: 1 MTVE------HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLL 54
MTVE VN FP G+RVLAVDDDP CL +LE LLR+CQY VTTT+QA+TAL++L
Sbjct: 1 MTVEDQRGCNSVNEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML 60
Query: 55 RENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYL 114
REN+NK+DLVISDV+MPDMDGFKLLELVGLEMDLPVIMLS +GD + V KGITHGA DYL
Sbjct: 61 RENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAVDYL 120
Query: 115 LKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGM---GNSDQNGKLNK 171
LKPVR+EELKNIWQHV+RRKK +DQN S +QDK +G+G+ E + G++DQNGK+N+
Sbjct: 121 LKPVRLEELKNIWQHVIRRKKWYPQDQNGSPDQDKGGDGAGEGEQVTSTGSADQNGKVNR 180
Query: 172 KRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD 231
KRKDQ+E+E+ E ++ + N E QKKPRVVWSVELH+KFV+AVNQLG+DKAVPKKILD
Sbjct: 181 KRKDQDEEEEGEGEDGNDNEES-GNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILD 239
Query: 232 LMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYH 291
LMNV+ LTRENVASHLQK+RLYLKR+SC ANQQ NMVAA G+ D SYLRM S++G G++
Sbjct: 240 LMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFR 299
Query: 292 TVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF 351
+V GPGQ ++ S+P +LGRLN+P GL + G+ S G++ H+++ +N N GK
Sbjct: 300 SVHGPGQLSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSLNNPLNTLGKL 359
Query: 352 HPALLPGSH-SGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIG 410
P LL + S N+ QG+ ++L+ Q QL K++ + + D T+F ++ FPD ++
Sbjct: 360 QPGLLQTNRGSTNLFQGISSALDPKQFQL-KSMNHSGDFNHKGDATSFTLAGCFPDVKVT 418
Query: 411 FGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNS-----------GSSSRLPD 459
G N + NNP L +PQ+ + + QS +S+ S GSS+ L D
Sbjct: 419 IGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPSLNQESFDVGVRGSSNFL-D 477
Query: 460 HGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLH 519
H RC+DNW VQ S NS LG ++ L RDN+S+ I N+P D SS
Sbjct: 478 HSRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPTSTRRDNISSTTSHIVNNPLDFSSSG 537
Query: 520 PLSNRFQDPKADLQFQA----------------------VQDAPCRSNVMFSPLNSAVSI 557
L+ +D + D+Q QA PC N F +NS VS
Sbjct: 538 SLTAPLEDSRLDMQGQADLVGNIFHNTNYTSKNRWGENSQNFNPCL-NGSFGAMNSLVSG 596
Query: 558 NGDVGPLGQCLDTNKTFFHRSNEFDSLGQSN-----FVDHFSMKINEVQRSSMQASS-NL 611
NG + PL Q +D K F + LGQSN H + + + M+
Sbjct: 597 NGSMNPLSQSMDQRKRF-----DASVLGQSNSGTLSMFQHLEAGNSALDPTGMRIPKMRS 651
Query: 612 KEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
E +L+ Q K+ ++ + DSL+D+ +++M+K +Q+ ++ +G FG SYS
Sbjct: 652 NEDFLLEQTKSPNGFVQNNYDSLDDI-VNAMIKRDQNDGVLMDGEFGFESYS 702
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/705 (47%), Positives = 414/705 (58%), Gaps = 125/705 (17%)
Query: 1 MTVEHVNG---------DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITAL 51
MTVE G D FP G+RVLAVDDDPTCL+LL+ LLRRCQY VTTT+QAITAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 52 KLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGAC 111
K+LRENKN FDLVISDV MPDMDGFKLLELVGLEMDLPVIMLS + DPKLVM+GITHGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 112 DYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNK 171
DYLLKPVRIEELKNIWQHV+RRKKID+KDQN S +QD + G+
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADGE--------------- 165
Query: 172 KRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD 231
+EDP++QKKPRVVWSVELHRKFVAAVNQLGI+KAVPK+ILD
Sbjct: 166 ------------------ENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILD 207
Query: 232 LMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYH 291
LMNVE LTRENVASHLQKYRLYLKRISCVA QQANMVAA G+ D SY+RM S++G G
Sbjct: 208 LMNVEGLTRENVASHLQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFG--- 264
Query: 292 TVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF 351
HAQNS N+ N GK
Sbjct: 265 ---------------------------------------------HAQNSSNSVNTHGKL 279
Query: 352 HPALLPGSHSGNILQGMPTSLELDQLQLNKNI-TSISELPNTKDNTTFHVSSGFPDARIG 410
P +LP + S ++ QG+PTSLELDQLQ K I T E + + T F ++GFPD+R+
Sbjct: 280 QPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFPDSRMT 339
Query: 411 FGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQS---LMSLN--------SGSSSRLPD 459
S+N L + +NPL L+ +PQ+ NQS ++LN SGSS+ L D
Sbjct: 340 VHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSSNFL-D 398
Query: 460 HGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLH 519
HGRCN+NW SA+Q S NS L L +LR+++S+ I SP D S+
Sbjct: 399 HGRCNENWQSALQLSKFPSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDFSATS 458
Query: 520 PLSNRFQDPKADLQFQA---------------------VQDAPCRSNVMFSPLNSAVSIN 558
L+ +D + ++ Q+ QD SN +F LNS + N
Sbjct: 459 VLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQDYTQSSNHVFGTLNSIIPAN 518
Query: 559 GDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMG 618
+GPL LD N +R + + QSN ++ +EV++S+M E YL+
Sbjct: 519 NVMGPLNHSLDQNNAACNRKMDMPLISQSNASSSSLVQHSEVEKSAMDTKMVSNEDYLLE 578
Query: 619 QQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
Q K+Q I S +SL+DL MS+M+K E D+ ++ G FG +YS
Sbjct: 579 QTKSQDGLIHNSYESLDDL-MSAMIKREHDETMLMNGEFGFDAYS 622
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/693 (47%), Positives = 438/693 (63%), Gaps = 57/693 (8%)
Query: 1 MTVE------HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLL 54
MTVE VN FP G+RVLAVDDDP CL +LE LLR+CQY VTTT+QA+TAL++L
Sbjct: 1 MTVEDQRGCNSVNEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML 60
Query: 55 RENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYL 114
REN+NK+DLVISDV+MPDMDGFKLLELVGLEMDLPVIMLS +GD + V KGITHGA DYL
Sbjct: 61 RENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAVDYL 120
Query: 115 LKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGM---GNSDQNGKLNK 171
LKPVR+EELKNIWQHV+RRKK +DQN S NQDK +G+G+ E + G+ DQNGK+N+
Sbjct: 121 LKPVRLEELKNIWQHVIRRKKWYPQDQNGSPNQDKGGDGAGEGEQVTSTGSGDQNGKVNR 180
Query: 172 KRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD 231
KRKDQ+E+E+ E ++ + N E QKKPRVVWSVELH+KFV+AVNQLG+DKAVPKKILD
Sbjct: 181 KRKDQDEEEEGEGEDGNDNEES-GNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILD 239
Query: 232 LMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYH 291
LMNV+ LTRENVASHLQK+RLYLKR+SC ANQQ NMVAA G+ D SYLRM S++G G++
Sbjct: 240 LMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFR 299
Query: 292 TVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF 351
+V GPGQ ++ S+P +LGRLN+P GL + G+ S G++ H+++ +N N GK
Sbjct: 300 SVHGPGQLSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSLNNPLNTLGKL 359
Query: 352 HPALLPGSH-SGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIG 410
P LL + S N+ QG+ ++L+ + QL K++ I + + D T+F ++ FPD ++
Sbjct: 360 QPCLLQTNRGSTNLFQGISSALDPKEFQL-KSMNHIGDFNHKGDATSFTLAGCFPDVKVT 418
Query: 411 FGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMS---LNSGS-------SSRLPDH 460
G N + NNP L +PQ+ + + QS +S LN S SS DH
Sbjct: 419 IGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPALNQESFDVGVRGSSNFLDH 478
Query: 461 GRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHP 520
RC+DNW VQ S NS LG ++ L P RDN+S+ I N+P D SS
Sbjct: 479 SRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPPSTRRDNISSTTSHIVNNPLDFSSSGS 538
Query: 521 LSNRFQDPKADLQFQA--VQDA--------------------PCRSNVMFSPLNSAVSIN 558
L+ +D + D+Q QA V + PC N F NS VS +
Sbjct: 539 LTAPLEDSRLDMQGQADLVGNIFHNTNYTSKNRWGENSQNFNPCL-NGSFGATNSLVSGS 597
Query: 559 GDVGPLGQCLDTNKTFFHRSNEFDSLGQSN-----FVDHFSMKINEVQRSSMQASS-NLK 612
G + PL Q +D K F + LGQSN H + + + M+
Sbjct: 598 GSMNPLSQSMDQRKRF-----DASVLGQSNSGTLSMFQHLEAGNSALDPTGMRIPKMRSN 652
Query: 613 EGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKE 645
E +L+ Q K+ ++ + DSL+D+ +++M+K
Sbjct: 653 EDFLLEQTKSPNGFVQNNYDSLDDI-VNAMIKR 684
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/675 (49%), Positives = 435/675 (64%), Gaps = 50/675 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDDDP CL +LE LLR+CQYHVTTT+QA+ AL +LREN+NKFDLVISDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPD+DGFKLLELVGLEMDLPVIMLS +GD KLVMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 129 HVVRRKKIDAKDQNNSDNQDK-PHNGSGQAEGM---GNSDQNGKLNKKRKDQNEDEDDED 184
HVVRRK D++DQN + N++K P+ G ++G+ ++DQN +L KKRKDQ+++E++
Sbjct: 133 HVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSDEEEEGG 192
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
+E++ EDP+ QKK RVVWSVELHRKFVAAVNQLG+DKAVPKKILDLMNVE LTRENVA
Sbjct: 193 EENED-DEDPSAQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVA 251
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTF 304
SHLQKYRLYLK+ A QQANMVAALG SD SYLR+ S++G G++ T G G+ N+T
Sbjct: 252 SHLQKYRLYLKK----AAQQANMVAALGGSD-SYLRIGSIDGYGDFCTSSGSGRITNATL 306
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNI 364
S+ ++G+ RLN+PA L M G+ SS +I +QN +++ N G P++ P + S ++
Sbjct: 307 PSYASTGIFSRLNSPAALNMRGISSSALIRPVQSQNINSSLNTLGNIQPSIFPANQSSSL 366
Query: 365 LQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNN 424
LQG+PTS+EL+Q + T IS+L D++ F V+SGFPD R N L V+NN
Sbjct: 367 LQGIPTSIELNQSKQRNCTTGISQLSQV-DSSGFTVASGFPDHRATVNGPNNSLPCVSNN 425
Query: 425 PLFLEGHPQEAHSNKMFGNQSLM--------SLNSG--SSSRLPDHGRCNDNWSSAVQSS 474
+ L+G+PQ H F NQS + S + G SS L DH RCNDNW +A Q S
Sbjct: 426 HIMLQGNPQ-THGPGAFSNQSSVRAASLCAESFDVGLCGSSNLLDHNRCNDNWQNAAQLS 484
Query: 475 GIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQF 534
NS L + L P + D+ S+ + NSP D SS +S +D + +L+
Sbjct: 485 KFPANSLPLCEAFSNDQLPPTSINDSNSSTHIG-NNSPVDFSSRMGISVPLEDTRNELRC 543
Query: 535 Q------AVQ---------------DAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKT 573
Q VQ D + F+ +NS S +G +G L+ N T
Sbjct: 544 QEGLIGNIVQPSSYTPRQRWEEHKLDYNQNMSCPFNSVNSHASSSGVTSSMGHVLNQNNT 603
Query: 574 FFHRSNEFDS---LGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTS 630
SN D+ +GQ N + EV++ S E Y++ Q K+Q ++ +
Sbjct: 604 IC--SNRVDASSLVGQLNGASPSISRCTEVEKFSSDIRLKPNEAYILEQMKSQDGFMQNT 661
Query: 631 VDSLEDLFMSSMVKE 645
+L+D+ M MVK
Sbjct: 662 FGTLDDI-MGVMVKR 675
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 325/692 (46%), Positives = 428/692 (61%), Gaps = 54/692 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP G+RVLAVDDDP CL +LE+LLR+CQYHVTTT Q+I AL++LREN+NKFDLVISDV
Sbjct: 18 DHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLVISDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLELVGLEMDLPVIMLS + D +LVMKGI HGACDYLLKPVRIEELKNIWQ
Sbjct: 78 NMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQ 137
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG----MGNSDQNGKLNKKRKDQNEDEDDED 184
HV+RRKK++ K +N +Q+K NG + E N+D + K N+KRKDQ++D+DDE
Sbjct: 138 HVIRRKKLEPKAKNKFPSQNKVQNGGNEVEQGFSPTSNAD-SAKFNRKRKDQDDDDDDEG 196
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
E+ + +DP+ QKKPRVVWSVELHRKFV+AVNQLG++KAVPKKILDLMNVE LTRENVA
Sbjct: 197 KENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVEGLTRENVA 256
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTF 304
SHLQKYRLYLKRIS VA+QQANMVA GS D +Y+RM S++G G+ H G G+ NS+
Sbjct: 257 SHLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSLDGYGDLHGFAGSGRLPNSSL 316
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHP-ALLPGSHSGN 363
S+ GMLGRLN+PAG+ + G+ SSG+I +++QN + N+ GK P +L + + N
Sbjct: 317 SSYSPVGMLGRLNSPAGMSLRGITSSGLI-QQNSQNLNCAINNLGKLQPTTMLSPNQTTN 375
Query: 364 ILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNN 423
+LQG+PTSLE+ QLQ +K+ TSI + D + F V + FP+ R G ST V+
Sbjct: 376 LLQGIPTSLEIGQLQHSKSTTSIGDFNTMNDTSGFGVPNSFPETRANIGNST---YSVSP 432
Query: 424 NPLFLEGHPQEAHSNKMFGNQSLMSLN-----------SGSSSRLPDHGRCNDNWSSAVQ 472
PL L+G + +GNQ+ + ++ GS+ PD N NW A
Sbjct: 433 APLMLQG------TIPTYGNQTSLRVDPLNGETFDIDVGGSNFLDPD--PSNGNWQGAAH 484
Query: 473 SSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADL 532
S S + Y LH + +S+ IGN D SS S D + D+
Sbjct: 485 LSRFSATSLTTNEAYPSDQLH--SMNSVISSTPSTIGNISVDFSSRSAGSASLLDSR-DV 541
Query: 533 Q---------FQAVQDAPCRS----------NVM--FSPLNSAVSINGDVGPLGQCLDTN 571
Q Q++ P +S NV +NS V+ +G+ PL Q + N
Sbjct: 542 QCQTGVVGSVIQSMNTMPKQSWEEHKHDFGRNVQHNLGAINSLVASDGNPTPLNQSFNQN 601
Query: 572 KTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSV 631
R + SN + V++ +N+ YL+ Q K+ I S
Sbjct: 602 GVVRDRKVGSSLIVPSNVASLSFPQHGVVEKLGPNTKTNVDGNYLLNQMKSHDGSIQGSF 661
Query: 632 DSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
+SL+D+ M+S++K EQ+++ G FG +S
Sbjct: 662 ESLDDI-MNSIIKREQNEIPEMNGEFGFDHFS 692
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/434 (56%), Positives = 316/434 (72%), Gaps = 24/434 (5%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
VN +FP G+R+LAVDDDP CL +LE LLR+CQY VTTT+QA+TAL++LREN+NK+DLVI
Sbjct: 12 VNEKKFPVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVI 71
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDV+MPDMDGFKLLELVGLEMDLPVIMLS +GD + V KG+THGA DYLLKPVR+EELKN
Sbjct: 72 SDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKN 131
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAE----GMGNSDQNGKLNKKRKDQNEDED 181
IWQHV+RRKK +DQN S NQDK +G+G+ E G++DQNGKLN+KRKDQ+++++
Sbjct: 132 IWQHVIRRKKWYPEDQNRSPNQDKGDDGAGEGEQGVTSTGSADQNGKLNRKRKDQDDEDE 191
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
+E ++ D N QKKPRVVWSV+LH+KFVAAVNQ+G+DKAVPKKILDLMNV+ LTRE
Sbjct: 192 EEGEDGDDNEVS-GNQKKPRVVWSVDLHQKFVAAVNQMGLDKAVPKKILDLMNVDGLTRE 250
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQK+RLYLKR+S NQQ NMV+A G+ D SYL+MSSV+G G++ ++ GPG+
Sbjct: 251 NVASHLQKFRLYLKRLSSGGNQQGNMVSAFGAKDSSYLQMSSVDGFGDFRSMHGPGRLST 310
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
++ S+P+ LGRLN+P GL + G+ SSG+ P LLP +
Sbjct: 311 TSLSSYPSGTFLGRLNSPGGLTLQGIASSGL------------------HQPGLLPTNQG 352
Query: 362 GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDV 421
N+ QG+ ++LE QLQ+ K+I I E D F ++S FPD ++ G +N +
Sbjct: 353 TNLFQGISSALEPKQLQM-KSINHIGEFNQKGDTAGFTLASCFPDVKVTIGSLSNTISGA 411
Query: 422 NNNPLFLEGHPQEA 435
+ L + QE+
Sbjct: 412 TQSSLSMPSLNQES 425
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 322/671 (47%), Positives = 402/671 (59%), Gaps = 107/671 (15%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +LE+LLR CQYHVTTT+QA AL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ-NGKLNKKRKDQNEDEDDEDDED 187
HVV R + D K++ +++N DK +GSG EG+GNSDQ NGK N+KRKDQ +++DED +D
Sbjct: 131 HVV-RSRFD-KNRGSNNNGDK-RDGSGN-EGVGNSDQNNGKGNRKRKDQYNEDEDEDRDD 186
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ +D QKK RVVW+VELH+KFVAAVNQLG +KA+PKKILDLMNVEKLTRENVASHL
Sbjct: 187 N---DDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 243
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS--TFR 305
QK+RLYLKRIS VANQQA M +S+ +++M+ ++G + G GQ+ R
Sbjct: 244 QKFRLYLKRISGVANQQAIM----ANSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMR 299
Query: 306 SFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKF-HPALLPGSHS- 361
SFP +G+LGRLN P+G+G+ L P +GM QN D GKF H + LP +HS
Sbjct: 300 SFPPNGILGRLNTPSGIGVRSLSSPPAGMF----LQNQ----TDIGKFHHVSSLPLNHSD 351
Query: 362 -GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFH-VSSGFPDARIGFGRSTNPLL 419
GNILQG+P LE DQLQ N N + N N + S FP F N L+
Sbjct: 352 GGNILQGLPMPLEFDQLQTNNNKSR-----NMNSNKSIAGTSMAFPS----FSTQQNSLI 402
Query: 420 DV-NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDH--GRCNDNWSSAVQSSGI 476
NNN + LEGHPQ + P H + ++WS+AV SS
Sbjct: 403 SAPNNNVVVLEGHPQ------------------ATPPGFPGHQINKRLEHWSNAVSSSTH 444
Query: 477 QPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQA 536
P P H +++ N DVS PL + DP +
Sbjct: 445 PP--------------PPAHNSNSI--------NHQFDVS---PLPHSRPDPLEWNNVSS 479
Query: 537 VQDAP-CRS-NVMFSPLNSAVSINGDVGPLGQCLD-TNKTFFHRSNEFDSLGQSNFVDHF 593
P C S N + SP LD TN F R+ +FDS + V
Sbjct: 480 SYSIPFCDSANTLSSP----------------ALDTTNPRAFCRNTDFDS---NTNVQPG 520
Query: 594 SMKINEVQRSSMQASSNLKEGYLMGQQKTQ-GSYISTSVDSLEDLFMSSMVKEEQDKVLV 652
++ +SSN KEG+++GQQK Q G ++ SL+D+ S+M K+EQ + +
Sbjct: 521 VFYGPSTDAMALLSSSNPKEGFVVGQQKLQSGGFMVADAGSLDDIVNSTM-KQEQSQGDL 579
Query: 653 PEGNFGCSSYS 663
G+ G +S
Sbjct: 580 SGGDLGYGGFS 590
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 396/678 (58%), Gaps = 106/678 (15%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +LETLLR CQYHVTTT++A AL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ-NGKLNKKRKDQNEDEDDEDDED 187
HVVR + + NN D +D GSG EG+G SDQ NG+ N+KRKDQ ++DDE+ +D
Sbjct: 131 HVVRSRFDKNRGSNNGDKRD----GSGN-EGVGYSDQNNGRANRKRKDQYNEDDDEEKDD 185
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ + + QKK RVVW+VELH+KFVAAVNQLG +KA+PKKILDLMNVEKLTRENVASHL
Sbjct: 186 NDDS---SAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 242
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRM-SSVNGLGNYH---TVGGPGQFQNS- 302
QK+RLYLKRIS VANQQA M +SD +L+M SS+NGL ++ G GQF
Sbjct: 243 QKFRLYLKRISGVANQQAIM----ANSDLHFLQMSSSLNGLDGFNHRPIPVGSGQFHGGA 298
Query: 303 -TFRSFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKF-HPALLPG 358
RSF + +LGRLN P+G+G+ L P +GM QN D GKF H + LP
Sbjct: 299 PAMRSFTPNEILGRLNTPSGIGVRNLSSPPAGMF----LQNQ----TDLGKFHHVSSLPL 350
Query: 359 SHS--GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTN 416
+HS GNIL G+P LE DQLQ N N + + + + S FP F N
Sbjct: 351 NHSDGGNILPGLPLPLEFDQLQTNNNNNNNNIRNMNNNKSIAGTSMAFPS----FSTQQN 406
Query: 417 PLLDV-NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDH--GRCNDNWSSAVQS 473
++ NNN + LEGHPQ S P H + ++WS+AV S
Sbjct: 407 SIIGAPNNNLVVLEGHPQS------------------SPPGFPGHQINKRLEHWSNAVSS 448
Query: 474 SGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQ 533
S + P P + + LP S D + +S+ + P
Sbjct: 449 STLPP-----------PAQNSNSINRQFDVSPLP--QSRPDTLEWNNVSSSYSIPF---- 491
Query: 534 FQAVQDAPCRSNVMFSPLNSAVSINGDVGPLGQCLD-TNKTFFHRSNEFDSLGQSN---F 589
C S SP LD TN F R+ +FDS + F
Sbjct: 492 --------CDSATTLSP---------------PALDTTNPRAFCRNMDFDSSTNAQPGCF 528
Query: 590 VDHFSMKIN---EVQRSSMQASSNLKEGYLMGQQKTQ-GSYISTSVDSLEDLFMSSMVKE 645
D + + +M +SSN KEG+++GQQK Q G ++S SL+D+ S+M K+
Sbjct: 529 YDTLQTRQSGNYGPTTDAMLSSSNPKEGFVVGQQKLQSGGFMSAEAGSLDDIVNSTM-KQ 587
Query: 646 EQDKVLVPEGNFGCSSYS 663
EQ + + G+ G +S
Sbjct: 588 EQSQGDLSGGDLGYGGFS 605
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/470 (52%), Positives = 317/470 (67%), Gaps = 49/470 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDPTCL +LE LL RCQYHVTTT QA TALKLLRENK++FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVR+E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNG-SGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HV+RRK DAK++ N D+ + G + + E +G +++N + ++K +D+N D+ D+ DE+
Sbjct: 143 HVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIG-ANRNKRQSRKSRDENGDDGDDSDEN 201
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ + D +TQKKPRVVWSVELHRKFVAAVNQLGI+KAVPKKILDLMNVE +TRENVASHL
Sbjct: 202 SNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHL 261
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSV---NGLGNYHTVGGPGQFQNSTF 304
QKYRLYLKR+S A++QAN+ AA G +P+Y+ M+S N G Y TV G Q
Sbjct: 262 QKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYNAYGRYRTVPTAGHTQ---- 317
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTT-NDQGKFHPALLPGSHSGN 363
A+ +L R+N+P+ G+HGL S I + HAQN+ +T+ ND G G ++GN
Sbjct: 318 ----ANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLG--------GLNNGN 365
Query: 364 ILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNN 423
+++G S + L N+ ++S+G P A RS PL N
Sbjct: 366 MIRGAQMS---------------TILTGPSGNSFPNISNGAPLATA--NRSLQPLESSN- 407
Query: 424 NPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQS 473
+ H HS+ +L+ G S + PD GR + W +AV S
Sbjct: 408 -----QQHLSRVHSSSADPFSTLV----GESPQFPDLGRTTNTWQTAVPS 448
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/470 (52%), Positives = 317/470 (67%), Gaps = 49/470 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDPTCL +LE LL RCQYHVTTT QA TALKLLRENK++FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVR+E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNG-SGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HV+RRK DAK++ N D+ + G + + E +G +++N + ++K +D+N D+ D+ DE+
Sbjct: 143 HVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIG-ANRNKRQSRKSRDENGDDGDDSDEN 201
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ + D +TQKKPRVVWSVELHRKFVAAVNQLGI+KAVPKKILDLMNVE +TRENVASHL
Sbjct: 202 SNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHL 261
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSV---NGLGNYHTVGGPGQFQNSTF 304
QKYRLYLKR+S A++QAN+ AA G +P+Y+ M+S N G Y TV G Q
Sbjct: 262 QKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYNAYGRYRTVPTAGHTQ---- 317
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTT-NDQGKFHPALLPGSHSGN 363
A+ +L R+N+P+ G+HGL S I + HAQN+ +T+ ND G G ++GN
Sbjct: 318 ----ANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLG--------GLNNGN 365
Query: 364 ILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNN 423
+++G S + L N+ ++S+G P A RS PL +
Sbjct: 366 MIRGAQMS---------------TILTGPSGNSFPNISNGAPLATA--NRSLQPLESSS- 407
Query: 424 NPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQS 473
+ H HS+ +L+ G S + PD GR + W +AV S
Sbjct: 408 -----QQHLSRVHSSSADPFSTLV----GESPQFPDLGRTTNTWQTAVPS 448
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 314/650 (48%), Positives = 390/650 (60%), Gaps = 106/650 (16%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +LE+LLR CQYHVTTT+QA AL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD-QNGKLNKKRKDQNEDEDDEDDED 187
HVV R + D K++ +++N DK +GSG EG+GNSD NGK N+KRKDQ +++DED +D
Sbjct: 131 HVV-RSRFD-KNRGSNNNGDK-RDGSGN-EGVGNSDPNNGKGNRKRKDQYNEDEDEDRDD 186
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ +D QKK RVVW+VELH+KFVAAVNQLG +KA+PKKILDLMNVEKLTRENVASHL
Sbjct: 187 N---DDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 243
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS--TFR 305
QK+RLYLKRIS VANQQA M +S+ +++M+ ++G + G GQ+ R
Sbjct: 244 QKFRLYLKRISGVANQQAIM----ANSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMR 299
Query: 306 SFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKF-HPALLPGSHS- 361
SFP +G+LGRLN+ +G+G+ L P +GM QN D GKF H + LP +HS
Sbjct: 300 SFPPNGILGRLNSSSGIGVRSLSSPPAGMF----LQNQ----TDIGKFHHVSSLPLNHSD 351
Query: 362 -GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFH-VSSGFPDARIGFGRSTNPLL 419
GNILQG+P LE DQLQ N N + N N + S FP F N L+
Sbjct: 352 GGNILQGLPMPLEFDQLQTNNNKSR-----NMNSNKSIAGTSMAFPS----FSTQQNSLI 402
Query: 420 DV-NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDH--GRCNDNWSSAVQSSGI 476
NNN + LEGHPQ + P H + ++WS+AV SS
Sbjct: 403 SAPNNNVVVLEGHPQ------------------ATPPGFPGHQINKRLEHWSNAVSSSTH 444
Query: 477 QPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQA 536
P P H +++ N DVS PL + DP +
Sbjct: 445 PP--------------PPAHNSNSI--------NHQFDVS---PLPHSRPDPLEWNNVSS 479
Query: 537 VQDAP-CRS-NVMFSPLNSAVSINGDVGPLGQCLD-TNKTFFHRSNEFDSLGQSNFVDHF 593
P C S N + SP LD TN F R+ +FDS + V
Sbjct: 480 SYSIPFCDSANTLSSP----------------ALDTTNPRAFCRNTDFDS---NTNVQPG 520
Query: 594 SMKINEVQRSSMQASSNLKEGYLMGQQKTQ-GSYISTSVDSLEDLFMSSM 642
++ +SSN KEG+++GQQK Q G ++ SL+D+ S+M
Sbjct: 521 VFYGPSTDAMALLSSSNPKEGFVVGQQKLQSGGFMVADAGSLDDIVNSTM 570
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/387 (59%), Positives = 272/387 (70%), Gaps = 35/387 (9%)
Query: 1 MTVEHVNGDQ-----FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLR 55
MTVE + GD FP G+RVLAVDDDP CL LL+TLLR+CQYHV+TTSQA ALK+LR
Sbjct: 1 MTVEKIKGDNENCENFPVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLR 60
Query: 56 ENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLL 115
ENK++FDLVISDVHMPDMDGFKLL+ VGLEMDLPVIMLS N DPKLVMKG+THGACDYL+
Sbjct: 61 ENKDRFDLVISDVHMPDMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLV 120
Query: 116 KPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHN-GSGQAEGMG------NSDQNGK 168
KPVRIEEL+NIWQHV+RR+K +++N S +Q KP+ SG+ +G N+DQNGK
Sbjct: 121 KPVRIEELRNIWQHVIRRRKSVTRNENKSADQAKPNQIASGEGGQLGGTIPGENADQNGK 180
Query: 169 LNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
N +++ EDE ED + +EDP TQKKPRVVWS+ELHRKFVAAVNQLGI+KAVPK+
Sbjct: 181 TNIRKRKDEEDE----SEDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKR 236
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLG 288
ILDLMNVE LTRENVASHLQKYRLYLKRIS VA QQANM AA G D ++RM GL
Sbjct: 237 ILDLMNVEGLTRENVASHLQKYRLYLKRISTVATQQANMAAAFGVKDSPFMRMGPFGGL- 295
Query: 289 NYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQ 348
N+ F + MLGR+N P + + + S I N+ +
Sbjct: 296 -----------PNAAFPHYSPGAMLGRINPPPNMNLRNISPSAFI-------QPNSFSAL 337
Query: 349 GKFHPALLPGSHSGNILQGMPTSLELD 375
K HP L + N+ G+ SLELD
Sbjct: 338 NKMHPGLANPNPGQNLFPGIQLSLELD 364
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/700 (41%), Positives = 411/700 (58%), Gaps = 80/700 (11%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
V GD+FP G+RVLAVDDD TCL +LE LLR+CQY+VTTT+QAI AL++LR+N+NKFDLVI
Sbjct: 2 VVGDRFPVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVI 61
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDV+MPDMDGFKLLELVGLEMDLPVIMLSG GD + VM+G+ GACDYL KPVRIEEL+N
Sbjct: 62 SDVNMPDMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQN 121
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQ--------------AEGMG---NSDQNGK 168
IWQHV+RR +ID+KD+N + ++ K + +G+ ++ M N+DQN K
Sbjct: 122 IWQHVLRR-RIDSKDKNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIK 180
Query: 169 LNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
L +KRK+ +EDE++E+ + ++ + QKKPR+VW ELHRKF+AAVN LGIDKA PK+
Sbjct: 181 LGQKRKELSEDEEEEEYDKENEEH--SNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKR 238
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLG 288
ILDLMNVE LTRENVASHLQKYRL L++ QQ +MVAALGSSDP YL+M SV G
Sbjct: 239 ILDLMNVEGLTRENVASHLQKYRLGLRK----PTQQPSMVAALGSSDP-YLQMDSVEG-- 291
Query: 289 NYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQ 348
+ T+ G ++T S+ + G+ RLN P+GL G+ S+ P+ +QN+ +
Sbjct: 292 -FRTLSGSVGMLSTTLPSYASGGVFCRLNPPSGL--RGVNSALFQPVL-SQNNSMSAKAF 347
Query: 349 GKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDAR 408
G ++ + + ++LQG+PTS++ ++ Q N++ I +L D++ F VSSGF D R
Sbjct: 348 GNMQLSMFSANQTSSLLQGIPTSIDANKFQQNRS-PGIRKLSPLDDSSGFKVSSGFSDTR 406
Query: 409 IGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLP------DHGR 462
N + D++NN L L+ + A ++ F N S + S ++ DH R
Sbjct: 407 ATVINPNNFVHDLSNNHLLLQRNSPPAQNSGAFRNHSSLGAASVNTQSFDPGICELDHNR 466
Query: 463 CNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLS 522
N +W Q S N+ ++ + L +L+ + ST GNSP D SS ++
Sbjct: 467 HNKSWQGTTQISKFPTNTSAVSKVFTHDQLAQNNLKFSSSTFC--SGNSPVDFSSTRAIA 524
Query: 523 NRFQDPKADLQFQA-----VQDAPCRS-------------NVMFSPLNS--AVSINGDVG 562
+D + LQ Q + A C + M NS +VS NGD
Sbjct: 525 PPLEDARGKLQSQEGLLENILLASCYTQHQSWESDKRGCNKDMSQTFNSTKSVSPNGDTS 584
Query: 563 PLGQCLDTNKTF----FHRSNEFDSLGQSNFVDHF-SMKINEVQRSSMQASSNLKEGYLM 617
LG LD N + S S+ QSN + F SMK N + ++
Sbjct: 585 SLGHSLDQNNSVSSEGIGASLVNPSITQSNEGEKFYSMKSN--------------DACIL 630
Query: 618 GQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNF 657
++Q + + SL D+ MS + ++EQ+ +++ +G
Sbjct: 631 RSMESQEGLMQNTFGSLNDI-MSEITEQEQNTIMLMDGEL 669
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 289/688 (42%), Positives = 393/688 (57%), Gaps = 45/688 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+QFP G+RVLAVDDDP CL +LE LLR+CQYHVTTT+QA+ ALK+LRENKN+FDLVISDV
Sbjct: 18 EQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLELVGLEMDLPVIMLS + + +LV KG+ HGACDYLLKPVRIEELKNIWQ
Sbjct: 78 NMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQ 137
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGM--GNSDQNGKLNKKRKDQNEDEDDEDDE 186
HV+RRKK K+QN S + A+G S N K K++KDQ++DE+ +++
Sbjct: 138 HVLRRKKPSVKNQNKSIIGNNTSQSVEVAKGCPPAVSTDNEKSGKRQKDQDDDEEGGEED 197
Query: 187 DDHNHEDPTTQKKPRVVW---SVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+ ++D +TQKKPRV W LHRKFVAAVN LG +KAVPKKILDLMNVE LTRENV
Sbjct: 198 STYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAVPKKILDLMNVEGLTRENV 257
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNST 303
ASHLQKYR YLK++ ++Q N + A G + S+ M+S++G ++ G G+ N+T
Sbjct: 258 ASHLQKYRQYLKKLCSEESEQCNKMGAFGGTHTSFRPMASLDGF----SMTGTGRLSNAT 313
Query: 304 FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGN 363
F +P+ ++G+LN+ AGL ++ + SSGMI NS + GK HP + +
Sbjct: 314 FSQYPSREIVGQLNSTAGLSLNDIASSGMIQSHKLSNSLSFI---GKPHPPFFHTNQPPH 370
Query: 364 ILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNN 423
G+ SL+ QL +K S E D ++F VS+ FPDA G S+N V++
Sbjct: 371 TFNGISMSLDHIQLHRDKRTLSFKESNLINDASSFTVSTSFPDAGRAVGSSSNYDFGVSS 430
Query: 424 NPLFLEGHPQEAHSNKMFGNQSLMS--------LNSGSS-SRLPDHGRCNDNWSSAVQSS 474
+ L L H Q+ H + FG QS + L+SG+S S + H + N NW ++Q
Sbjct: 431 HSLMLREHKQQIHGDGEFGGQSSLKITLDNREPLDSGTSVSNILGHSQSNKNWPGSIQLP 490
Query: 475 GIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQF 534
N S+ G Y P PG +S+ N P S S+ D + D Q
Sbjct: 491 KFSSN-VSVTGIYP-PDGMPGTYL-TISSAQPDNDNFPVGFPSTSGDSSSHLDLRGDTQC 547
Query: 535 ------QAVQDAPCRSNVMFSPL-------------NSAVSINGDVGPLGQCLDTNKTFF 575
V+ RS + +S VS N PL Q + N
Sbjct: 548 YEELIGSVVEATNGRSKQQWEAAKQDYYGNHSSVVRDSFVSGNSVADPLIQSANQNNAIC 607
Query: 576 HRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLE 635
+ S Q N + + + V+ S+M N M Q K Q + S+S +SL+
Sbjct: 608 LGNMSSSSTNQLN-IGAPTFIHDGVEISTMNTWMNYDGKIPMDQTKLQHGFSSSSFNSLD 666
Query: 636 DLFMSSMVKEEQDKVLVPEGNFGCSSYS 663
+L ++++ K++QD+ + G FG + S
Sbjct: 667 EL-VNALSKQDQDQSIQINGEFGFDAQS 693
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/379 (60%), Positives = 277/379 (73%), Gaps = 17/379 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLL RCQYHVTTT+QA ALK+LREN++ FDLVISDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K V+KGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 129 HVVRRKKIDAKDQNNSDNQDK----PHNGSGQAEG---MGNSDQNGKLNKKRKDQNEDED 181
HV+RR K +D+ N D ++ P+ S G G+ DQ+G+ +KKRK+ +E+
Sbjct: 138 HVIRR-KFSTRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
DE + + + +DP+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQKYRLYLKR+S VA+QQ ++VAALG DP +L M GL Y +
Sbjct: 257 NVASHLQKYRLYLKRLSAVASQQVSIVAALGGRDP-FLHMGGFEGLQGYQAF-----TSS 310
Query: 302 STFRSFPASGMLGR-LNAPAGLGMHGLPSSGMI-PMRHAQNSDNTTNDQGKFHPALLPGS 359
+ SF G+L N PA LG G+P+S I M + ++ ND K+H + LPG+
Sbjct: 311 AALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMSGSHTLSHSINDANKYHLS-LPGN 369
Query: 360 HSGNILQGMPTSLELDQLQ 378
GN+ QG+ TSL Q+Q
Sbjct: 370 QKGNLGQGLATSLGQTQMQ 388
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/379 (60%), Positives = 276/379 (72%), Gaps = 17/379 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLL RCQYHVTTT+QA ALK+LREN++ FDLVISDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K V+KGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 129 HVVRRKKIDAKDQNNSDNQDK----PHNGSGQAEG---MGNSDQNGKLNKKRKDQNEDED 181
HV+RR K +D+ N D ++ P+ S G G+ DQ+G+ +KKRK+ +E+
Sbjct: 138 HVIRR-KFSTRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
DE + + + +DP+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQKYRLYLKR+S VA+QQ ++VAALG DP +L M GL Y +
Sbjct: 257 NVASHLQKYRLYLKRLSAVASQQVSIVAALGGRDP-FLHMGGFEGLQGYQAF-----TSS 310
Query: 302 STFRSFPASGMLGR-LNAPAGLGMHGLPSSGMI-PMRHAQNSDNTTNDQGKFHPALLPGS 359
+ SF G+L N PA LG G+P+S I M + ++ ND K+H + LPG+
Sbjct: 311 AALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMSGSHTLSHSINDANKYHLS-LPGN 369
Query: 360 HSGNILQGMPTSLELDQLQ 378
GN+ QG+ SL Q+Q
Sbjct: 370 QKGNLGQGLAASLGQTQMQ 388
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/383 (59%), Positives = 274/383 (71%), Gaps = 24/383 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVT T+QAI AL++LREN++ FDLVISDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMFDLVISDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVRIEELKNIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELKNIWQ 137
Query: 129 HVVRRKKIDAKDQNNSDNQD---KPHNGSG----QAEGMGNSDQNGKLNKKRKDQNEDED 181
HVVRR K +D N+D + KP + G+S Q+G+ NKKRK+ + +E+
Sbjct: 138 HVVRR-KFSTRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQSGRPNKKRKEYHSEEE 196
Query: 182 DED-DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
DED D +++DP+ K+PRVVWSVELHRKFV AVN LGIDKAVPK+IL+LMNVEKLTR
Sbjct: 197 DEDGDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKAVPKRILELMNVEKLTR 256
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYR+YL+R+S VA+QQA +VAALG DP +LRM + GL Y P
Sbjct: 257 ENVASHLQKYRVYLRRLSAVASQQAGIVAALGGRDP-FLRMDAFEGLQGYQAFTSPAAL- 314
Query: 301 NSTFRSFPASGMLGRLNAP----AGLGMHGLPSSGMIPMRHAQNSDN-TTNDQGKFHPAL 355
STF G G LN+P + + G+ +S IP + + N D +H +
Sbjct: 315 -STF------GAHGLLNSPRNNQTAVVIQGVATSRSIPTGSSSCTTNPLIGDAANYHLS- 366
Query: 356 LPGSHSGNILQGMPTSLELDQLQ 378
PG+ GN+ QG+ TSL QL+
Sbjct: 367 PPGNRHGNLAQGLVTSLGQTQLE 389
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/505 (49%), Positives = 320/505 (63%), Gaps = 61/505 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDDDPTCL +LE+LL RC YHVTTT QA TAL++LRENK++FDLVISDV
Sbjct: 15 DRFPVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDV 74
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVR+E+LK IWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQ 134
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVRR + +N D K NG G+ N N + R+D+N D+ D+ DE+
Sbjct: 135 HVVRR-NTKTRGNDNDDAGQKVQNGDGE-----NGGANRNKRQSRRDENGDDGDDSDENS 188
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+ + D ++QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENVASHLQ
Sbjct: 189 NENADASSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQ 248
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFP 308
KYRLYLKR+S A++QAN+VAALG +P+Y M+S++ +Y+ G +T S
Sbjct: 249 KYRLYLKRMSMDASRQANLVAALGGRNPAYGNMNSLDVFRHYNNAYGRYPPVPTTTHS-Q 307
Query: 309 ASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTT-NDQGKFHPALLPGSHSGNILQG 367
++ ++ R+N+P+ GMHGL SS + HAQ + T+ ND G ++GN+++
Sbjct: 308 SNNLVARMNSPSAFGMHGLLSSQPLQHGHAQTNMGTSLNDL---------GVNNGNMIRA 358
Query: 368 --MPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNP 425
MPT + T N+ ++S+G P A RS PL
Sbjct: 359 AQMPTMVT-----------------GTSCNSFTNISNGAPLAPA--NRSVQPL------- 392
Query: 426 LFLEGHPQEAHSNKMFGNQSLMSLNS-----GSSSRLPDHGRCNDNWSSAVQSSGIQPNS 480
E+ + + G L S +S G S PD GR ++ W +AV S+ IQ
Sbjct: 393 --------ESSNRQHLGQIHLSSTDSFSSFVGESHHFPDLGRTSNTWQTAVPSN-IQ--E 441
Query: 481 FSLGGDYKQPTLHPGHLRDNLSTMA 505
G Q TLH R+ +S+
Sbjct: 442 LGHNGSMSQATLHVNGPRNPVSSFT 466
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/383 (60%), Positives = 277/383 (72%), Gaps = 24/383 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVT T+QA+ AL++LREN++ FDLVISDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDV 74
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLSGNG+ K VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 134
Query: 129 HVVRRKKIDAKDQNNSDNQDK----PHNGSGQAEG---MGNSDQNGKLNKKRKD-QNEDE 180
HVVRR K D N D ++ P+ SG G+ DQNG+ NKKRKD +E+E
Sbjct: 135 HVVRR-KFSTPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKRKDYHSEEE 193
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
++++ + + +DP+ K+PRVVWSVELHRKFVAAVN LGIDKAVPK+IL+LMNVEKLTR
Sbjct: 194 GEDEESNGQDDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLTR 253
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYRLYL+R+S VA+QQA +VA+LG D +LRM + GL Y P
Sbjct: 254 ENVASHLQKYRLYLRRLSAVASQQAGIVASLGGKD-HFLRMGAFEGLQGYQAFTSP---- 308
Query: 301 NSTFRSFPASGMLGRLNAP----AGLGMHGLPSSGMIPMRHAQNSDN-TTNDQGKFHPAL 355
+ SF A G+ LN+P L + GL SS I ++ N + D K+H +L
Sbjct: 309 -TALPSFSAHGL---LNSPRNNQTALVIQGLASSRSIQTASGSSTTNHSIVDANKYHLSL 364
Query: 356 LPGSHSGNILQGMPTSLELDQLQ 378
G+ GN+ QG+ TSL QLQ
Sbjct: 365 R-GNQQGNLAQGLVTSLGPAQLQ 386
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/368 (58%), Positives = 274/368 (74%), Gaps = 23/368 (6%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP G+RVLAVDDDPTCL +LE LLRRC YHVTTT QA TAL++LRENK++FDLVISDVHM
Sbjct: 18 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 77
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVR+E+LK IWQHV
Sbjct: 78 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGM-GNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+RR + N+ +Q P+ AEG G +++N + +++ +D+N D+ D+ DE+ +
Sbjct: 138 IRRNTKNRGSDNDDASQKGPN-----AEGENGGANRNKRQSRRDRDENGDDGDDSDENSN 192
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
++ D ++QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENVASHLQK
Sbjct: 193 DNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQK 252
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKR+S A++QAN+VAALG +P+Y M+S++ +Y+ G +R P
Sbjct: 253 YRLYLKRMSMDASRQANLVAALGGRNPAYSNMNSMDVFRHYNNAYG-------RYRPVPT 305
Query: 310 S------GMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSD--NTTNDQGKFHPALLPGS 359
S ++ R+N+P+ GMHGL P S + + HAQN++ + ND G + L+ +
Sbjct: 306 STHSQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQNNNLGTSLNDLGVNNGNLIRTA 365
Query: 360 HSGNILQG 367
H ++ G
Sbjct: 366 HMSTMVTG 373
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/384 (59%), Positives = 271/384 (70%), Gaps = 26/384 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVTTT+QAITALK+LREN++ +DLVISDV
Sbjct: 14 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDV 73
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 133
Query: 129 HVVRRK-------KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDED 181
HVVRRK +D N P +G Q G SDQ+G+++KKRK+ + DE+
Sbjct: 134 HVVRRKFSKRERSNLDIYKDFNKLPSADPCHGHNQITA-GASDQSGRISKKRKEMHSDEE 192
Query: 182 DEDDEDDHNHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
D+ +E+D D P+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTR
Sbjct: 193 DDGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 252
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYRLYLKR+S VA+QQA++VAA G DP++L M + GL +Y
Sbjct: 253 ENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRDPAFLHMGAFEGLQSYQPFA-----P 307
Query: 301 NSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDN------TTNDQGKFHPA 354
+ SF G+LGR +A G+P + P Q + N D F +
Sbjct: 308 CAALSSFSPHGLLGRTSA----ATFGVPE--LAPAMTVQTATNNGIISHCAGDANDFQLS 361
Query: 355 LLPGSHSGNILQGMPTSLELDQLQ 378
L + N+ QG TSL L QLQ
Sbjct: 362 GLQENQQANLGQGSATSLGLPQLQ 385
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/417 (56%), Positives = 288/417 (69%), Gaps = 37/417 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVT+T+QAITALKLLREN++ FDLVISDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 129 HVVRRKKIDAKDQNNSD---NQDKPHNGSGQ----AEGMGNSDQNGKLNKKRKDQNEDED 181
HVVRR K +++NN D +KP + G+SDQNG+ ++KRK+ + ++D
Sbjct: 140 HVVRR-KFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 182 DEDDEDDHNHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
DE D++D+ D P+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYRLYLKR+ VA+QQA++VAA G DPS+L + + GL +Y
Sbjct: 259 ENVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFA-----P 313
Query: 301 NSTFRSFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKFHPALLPG 358
++ SF G+L R +A A G+ L PSS + +T + H L
Sbjct: 314 SAALPSFNPHGLLTRTSAAAAFGLQELAAPSSTI---------QTSTGNVTVGH--CLEE 362
Query: 359 SHSGNILQGMPTSLELDQLQLN---------KNITSISELPNTKDNTTFHV-SSGFP 405
+ N+ QG+ ++ QLQ N ++ S S L NT +T V SS P
Sbjct: 363 NQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFSGSSLTNTLSSTLQRVPSSSLP 419
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/417 (56%), Positives = 288/417 (69%), Gaps = 37/417 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVT+T+QAITALKLLREN++ FDLVISDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 129 HVVRRKKIDAKDQNNSD---NQDKPHNGSGQ----AEGMGNSDQNGKLNKKRKDQNEDED 181
HVVRR K +++NN D +KP + G+SDQNG+ ++KRK+ + ++D
Sbjct: 140 HVVRR-KFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 182 DEDDEDDHNHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
DE D++D+ D P+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYRLYLKR+ VA+QQA++VAA G DPS+L + + GL +Y
Sbjct: 259 ENVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFA-----P 313
Query: 301 NSTFRSFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKFHPALLPG 358
++ SF G+L R +A A G+ L PSS + +T + H L
Sbjct: 314 SAALPSFNPHGLLTRTSAAAAFGLQELAAPSSTI---------QTSTGNVTVGH--CLEE 362
Query: 359 SHSGNILQGMPTSLELDQLQLN---------KNITSISELPNTKDNTTFHV-SSGFP 405
+ N+ QG+ ++ QLQ N ++ S S L NT +T V SS P
Sbjct: 363 NQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFSGSSLTNTLSSTLQRVPSSSLP 419
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 295/680 (43%), Positives = 372/680 (54%), Gaps = 166/680 (24%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
MTVE + DQFP G+RVLAVDDD TCL +LETLL RCQYHVTTT QA TALKLLRENKNK
Sbjct: 1 MTVEQ-DLDQFPVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNK 59
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FDLVISDV MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+ HGACDYLLKPVRI
Sbjct: 60 FDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRI 119
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNG-KLNKKRKDQNED 179
EELKNIWQHVVR+ K + S+ G++E GNSDQNG K N+KRKDQ E+
Sbjct: 120 EELKNIWQHVVRKGKFKKMKSSLSN---------GESE--GNSDQNGVKANRKRKDQFEE 168
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
E+++++ N +DPT QKKPRV+W+ ELH K +AAV+ LG++KAVPKKILDLMNVEKLT
Sbjct: 169 EEEDEERGIEN-DDPTAQKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLT 227
Query: 240 RENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYH----TVGG 295
RENVASHLQK+R LK+I+ NQQANM A D +++MSS+ GLG +H G
Sbjct: 228 RENVASHLQKFRSALKKITNETNQQANMAAM----DSHFMQMSSLKGLGGFHHHRPIPLG 283
Query: 296 PGQFQN--STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHP 353
GQF +T R +P++ LGRLN+ AG+ H S +P H ND G
Sbjct: 284 SGQFHGGAATMRQYPSNRTLGRLNSLAGMFPH---VSSSLPRNH--------NDGG---- 328
Query: 354 ALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGR 413
G ILQG+P L L + N T FP
Sbjct: 329 --------GYILQGLPIP-PLQGLHIENNKT-------------------FPS------- 353
Query: 414 STNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQS 473
++P+ LEGH Q + + + G + +N RL D WS+AV S
Sbjct: 354 ----FTSQQSSPVVLEGHLQSSSPSSIPGFSPHLEMN----KRLED-------WSNAVLS 398
Query: 474 SGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQ 533
S P S G + +P D L N CD +S PL N
Sbjct: 399 STNIPQS----GAHSKP--------DALE------WNQFCDSAS--PLMN---------- 428
Query: 534 FQAVQDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSN----- 588
+NV DTN T F R+ +F GQSN
Sbjct: 429 ----------TNV----------------------DTNPTSFCRNTDF---GQSNSAQTE 453
Query: 589 ------FVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSM 642
++ + + + S+N KEG +MGQQK + ++++ SL+D+ ++SM
Sbjct: 454 IFNPLQIKQQYANNLGPMTDAQQLTSNNTKEGLVMGQQKVESGFMASDAGSLDDI-VNSM 512
Query: 643 VKEEQDKVLVPEGNFGCSSY 662
+ +EQ + EG+ G +
Sbjct: 513 MTQEQSQADFGEGDLGFGWF 532
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/379 (58%), Positives = 279/379 (73%), Gaps = 19/379 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LE LLRRCQY VTTT+QA+ AL++LR+N++ FDLVISDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVISDV 74
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVR+EEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQ 134
Query: 129 HVVRRKKIDAKDQNNSDNQD--KPHNGS-----GQAEGMGNSDQNGKLNKKRKD-QNEDE 180
HVVRRK + + N ++ +P N Q G G DQ+G+ +KKRK+ +E+E
Sbjct: 135 HVVRRKFSNCERANIDGYEECTRPSNADFDHVHSQITG-GTPDQSGRSSKKRKEYHSEEE 193
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
D+ ++ + ++DP+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVE+LTR
Sbjct: 194 DEGEESNGQENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLTR 253
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQKYRLYLKR+S VA+QQA++VAA G +DP ++RM + GL Y +
Sbjct: 254 ENVASHLQKYRLYLKRLSAVASQQASIVAAFGGNDP-FMRMGAFEGLQGYQSFA-----S 307
Query: 301 NSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSH 360
++ SF G+L R N+P + G+ +S I + ++ +D K+H + LPG+
Sbjct: 308 SAALPSFTPQGLLNR-NSPTSFALQGMSASRPIQIASNSTISHSISDPNKYHLS-LPGTS 365
Query: 361 S--GNILQGMPTSLELDQL 377
S GN+ QG+ TS+ QL
Sbjct: 366 SRQGNLAQGLTTSVGQVQL 384
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/382 (58%), Positives = 282/382 (73%), Gaps = 23/382 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LE LLRRCQYHVTTT+QA+ AL +LR+N++ FDLVISDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVISDV 74
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVR+EEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQ 134
Query: 129 HVVRRKKIDAKDQNNSDNQD--KPHNG----SGQAEGMGNSDQNGKLNKKRKD-QNEDED 181
HVVRRK + NN ++ +P N + G DQ+G+ +KKRK+ +E+ED
Sbjct: 135 HVVRRKFSNCDRANNDGYEECNRPSNADFDLAHSQITAGPPDQSGRPSKKRKEYHSEEED 194
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
+ ++ + +++DP+ KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVE+LTRE
Sbjct: 195 EGEESNGQDNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLTRE 254
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQKYRLYLKR+S VA+QQA++VAALG +DP ++RMS+ GL Y + +
Sbjct: 255 NVASHLQKYRLYLKRLSAVASQQASIVAALGGNDP-FMRMSAFEGLHGYQSF-----VSS 308
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG----KFHPALLP 357
+ SF G+L R N PA + G+ +S P++ A + ++ G K+H + LP
Sbjct: 309 AALPSFSPQGLLNR-NNPASFAIQGVSASR--PIQIATGNTTMSHSIGDPNDKYHLS-LP 364
Query: 358 GSHS--GNILQGMPTSLELDQL 377
G+ GN+ QG+PT + QL
Sbjct: 365 GTSCLQGNLAQGLPTPVGQVQL 386
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/390 (60%), Positives = 273/390 (70%), Gaps = 34/390 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHV TT+QAITALKLLREN++ FDLVISDV
Sbjct: 22 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDV 81
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 82 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 141
Query: 129 HVVRRK-------KIDA-KDQNNSDNQDKPHN---GSGQAEGMGNSDQNGKLNKKRKDQN 177
HVVRRK +D KD N D H+ G GQ G SDQ+G++ +KRK+ +
Sbjct: 142 HVVRRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTA-GASDQSGRIGRKRKEMH 200
Query: 178 EDEDDEDDEDDHNHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
DE+D+ +E+D D P+ KKPRVVWS+ELHRKFVAAVNQLGIDKAVPK+IL+LMNVE
Sbjct: 201 SDEEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVE 260
Query: 237 KLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGP 296
KLTRENVASHLQKYRLYLKR+S VA+QQA++VAA G DP +L M + GL +Y
Sbjct: 261 KLTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRDP-FLHMGAFEGLQSYQPFAPC 319
Query: 297 GQFQNSTFRSFPASGMLGRLNAPA--------GLGMHGLPSSGMIPMRHAQNSDNTTNDQ 348
S+F P G LGR A A + + S+GMI + D
Sbjct: 320 AAL--SSF--IPHHGSLGRTTAAAFGVPELAPAITVQAAASNGMI--------SHCAGDA 367
Query: 349 GKFHPALLPGSHSGNILQGMPTSLELDQLQ 378
KF + + + N+ QG TSL L QLQ
Sbjct: 368 SKFQLSGIQENQQPNLGQGSATSLGLPQLQ 397
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/482 (51%), Positives = 309/482 (64%), Gaps = 49/482 (10%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
H DQFP G+RVLAVDDDPTCL LLE LL+ CQYHVTTT QA TALKLLRE K++FDLV
Sbjct: 18 HGAKDQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKDQFDLV 77
Query: 65 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
ISDVHMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVRIE+L+
Sbjct: 78 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLR 137
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG-MGNSDQNGKLNKKRKDQNEDEDDE 183
IWQHVVRR+ DAK+ N ++ AEG G ++N + +++ +D N D+ D+
Sbjct: 138 TIWQHVVRRRSCDAKNNGNDNDDSGKKLQVVSAEGDNGGGNRNKRTSRRGRDDNGDDGDD 197
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
DE+ + + D +TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENV
Sbjct: 198 SDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENV 257
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ--N 301
ASHLQKYRLYLKR+S A++QAN+ AA G +P+Y+ M GL + G+++
Sbjct: 258 ASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNM----GLDAFRQYNAYGRYRPVP 313
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTT--NDQGKFHPALLPGS 359
+T S P + +L R+N+PA GMHGL S + + H QN+ +T+ N G + L+ G+
Sbjct: 314 TTNHSQP-NNLLARMNSPA-FGMHGLLPSQPLQIGHTQNNMSTSVGNVGGMNNGNLIRGA 371
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIG--FGRSTNP 417
H MP LQ S FP G F +N
Sbjct: 372 H-------MP-------LQ--------------------DTSKCFPTGPSGNSFANISNS 397
Query: 418 --LLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSG 475
L+ NN PL + H ++ + + G S + PD GRCN W +AV SS
Sbjct: 398 IQLVTTNNLPLQSLEPSNQQHLGRLQSSADPFNSFVGESPQFPDLGRCNTTWPTAVSSSN 457
Query: 476 IQ 477
+Q
Sbjct: 458 VQ 459
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/477 (50%), Positives = 304/477 (63%), Gaps = 39/477 (8%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
H DQFP G+RVLAVDDDPTCL +LE LL RCQYHVTTT QA TALKLLRE K++FDLV
Sbjct: 16 HGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLV 75
Query: 65 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
ISDVHMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVRIE+L+
Sbjct: 76 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLR 135
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG-MGNSDQNGKLNKKRKDQNEDEDDE 183
IWQHVVRR+ DAK+ N ++ AEG G ++N ++++K +D N D+ D+
Sbjct: 136 TIWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDD 195
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D++ + + D ++QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENV
Sbjct: 196 SDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENV 255
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ--N 301
ASHLQKYRLYLKR+S A++QAN+ AA G +P+Y+ M GL + G+++
Sbjct: 256 ASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNM----GLDAFRQYNAYGRYRPVP 311
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
+T S P + +L R+N+PA GMHGL S + + H QN+
Sbjct: 312 TTNHSQP-NNLLARMNSPA-FGMHGLLPSQPLQIGHNQNN-------------------- 349
Query: 362 GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVS-SGFPDARIGFGRSTNPLLD 420
+ TSL N N+ + +P + F SG A I ++ L+
Sbjct: 350 ------LSTSLGNVGGMNNGNLIRGAHMPLQDTSKCFPTGPSGNSFANIS---NSTQLVT 400
Query: 421 VNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQ 477
NN PL + H ++ + + G + D GRCN W +AV SS +Q
Sbjct: 401 TNNLPLQSLEPSNQQHLGRLHSSADPFNSFVGEPPQFADLGRCNTTWPTAVSSSNVQ 457
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/477 (50%), Positives = 304/477 (63%), Gaps = 39/477 (8%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
H DQFP G+RVLAVDDDPTCL +LE LL RCQYHVTTT QA TALKLLRE K++FDLV
Sbjct: 16 HGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLV 75
Query: 65 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
ISDVHMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVRIE+L+
Sbjct: 76 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLR 135
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG-MGNSDQNGKLNKKRKDQNEDEDDE 183
IWQHVVRR+ DAK+ N ++ AEG G ++N ++++K +D N D+ D+
Sbjct: 136 TIWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDD 195
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D++ + + D ++QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENV
Sbjct: 196 SDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENV 255
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ--N 301
ASHLQKYRLYLKR+S A++QAN+ AA G +P+Y+ M GL + G+++
Sbjct: 256 ASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNM----GLDAFRQYNAYGRYRPVP 311
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
+T S P + +L R+N+PA GMHGL S + + H QN+
Sbjct: 312 TTNHSQP-NNLLARMNSPA-FGMHGLLPSQPLQIGHNQNN-------------------- 349
Query: 362 GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVS-SGFPDARIGFGRSTNPLLD 420
+ TSL N N+ + +P + F SG A I ++ L+
Sbjct: 350 ------LSTSLGNVGGMNNGNLIRGAHMPLQDTSKCFPTGPSGNSFANIS---NSTQLVT 400
Query: 421 VNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQ 477
NN PL + H ++ + + G + D GRCN W +AV SS +Q
Sbjct: 401 TNNLPLQSLEPSNQQHLGRLHSSADPFNSFVGEPPQFADLGRCNTTWPTAVSSSNVQ 457
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/482 (51%), Positives = 307/482 (63%), Gaps = 49/482 (10%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
H DQFP G+RVLAVDDDPTCL +LE LL RCQYHVTTT QA TALKLLRE K++FDLV
Sbjct: 16 HGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLV 75
Query: 65 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
ISDVHMPDMDGFKLLELVGLEMDLPVIMLS NG+ + VMKGITHGACDYLLKPVRIE+L+
Sbjct: 76 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLR 135
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG-MGNSDQNGKLNKKRKDQNEDEDDE 183
IWQHVVRR+ DAK+ N ++ EG G ++N ++++K +D N D+ D+
Sbjct: 136 TIWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSVEGDNGGVNRNKRISRKGRDDNGDDGDD 195
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D++ + + D ++QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE +TRENV
Sbjct: 196 SDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENV 255
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ--N 301
ASHLQKYRLYLKR+S A++QAN+ AA G +P+Y+ M GL + G+++
Sbjct: 256 ASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNM----GLDAFRQYNAYGRYRPVP 311
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTT--NDQGKFHPALLPGS 359
+T S P + +L R+N+PA GMHGL S + + H QN+ NT+ N G + L+ G+
Sbjct: 312 TTNHSQP-NNLLARMNSPA-FGMHGLLPSQPLQIGHNQNNLNTSLGNVGGMNNGNLIRGA 369
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIG--FGRSTNP 417
H MP LQ S FP G F +N
Sbjct: 370 H-------MP-------LQ--------------------DTSKCFPTGPSGNSFANISNS 395
Query: 418 --LLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSG 475
L+ NN PL + H ++ + + G + D GRCN W +AV SS
Sbjct: 396 TQLVTTNNLPLQSLEPSNQQHLGRLHSSADPFNSFVGEPPQFADLGRCNTTWPTAVSSSN 455
Query: 476 IQ 477
+Q
Sbjct: 456 VQ 457
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 233/413 (56%), Positives = 282/413 (68%), Gaps = 28/413 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDDP CL +LETLLRRCQYHVT T+QAITALKLLRENK+ FDLVISDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDMFDLVISDV 79
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIMLS NG+ K V+KGITHGACDYLLKPVRIEEL+N+WQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNVWQ 139
Query: 129 HVVRRKKIDAKDQNNSD---NQDKP-----HNGSGQAEGMGNSDQNGKLNKKRKD-QNED 179
HVVRR K ++ +N D KP ++G Q G+SDQ+ + KKRK+ +E+
Sbjct: 140 HVVRR-KFSNREPSNLDFCKEFSKPPSADSYHGLNQVT-CGSSDQSSRACKKRKELHSEE 197
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
ED+ +D D +++P+ K+PRVVWSVELHRKFVAAVN LGIDKAVPK+IL+LMNVEKLT
Sbjct: 198 EDEGEDNDAQENDEPSASKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLT 257
Query: 240 RENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQF 299
RENVASHLQKYRLYL+R+S VA+QQA++ AA G DP +L M + GL +Y T
Sbjct: 258 RENVASHLQKYRLYLRRLSAVASQQASIAAAFGGRDP-FLHMGAFEGLHSYQTFA----- 311
Query: 300 QNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNS-DNTTNDQGKFHPALLPG 358
+ SF G+L A A G+ L S I + + + D KFH L
Sbjct: 312 PSVALSSFNPHGLLSGAGATA-FGLQELAPSKAIQCATSNGAVGHCAGDTNKFHIVSLQE 370
Query: 359 SHSGNILQGMPTSLELDQLQLN---------KNITSISELPNTKDNTTFHVSS 402
+ ++ QG+ TSL L QLQ ++ S S L NT T V+S
Sbjct: 371 NQPASLTQGLTTSLGLPQLQQKWIHQETNDLSSVFSGSALANTMSGTLQRVAS 423
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 282/664 (42%), Positives = 365/664 (54%), Gaps = 160/664 (24%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +L+TLL+RCQYHVTTT+QA TAL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+ HGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR+ K+ N S NGSG + K N+KRK+Q E+E++E+ +D
Sbjct: 131 HVVRKSKLKKNKSNVS-------NGSGNCD---------KANRKRKEQYEEEEEEERGND 174
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
++DPT QKKPRV+W+ ELH KF+AAV+ LG+++AVPKKILDLMNV+KLTRENVASHLQ
Sbjct: 175 --NDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNY--HTVG---GPGQFQNST 303
K+R+ LK++S A QQAN A D +++M+S GLG + H G G GQF T
Sbjct: 233 KFRVALKKVSDDAIQQANRAAI----DSHFMQMNSQKGLGGFYHHHRGIPVGSGQFHGGT 288
Query: 304 --FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
R + ++ LGRLN+ G GM P S P H ND
Sbjct: 289 TMMRHYSSNRNLGRLNS-LGAGMFQ-PVSSSFPRNH--------ND-------------G 325
Query: 362 GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDV 421
GNILQG+P L++LQ+N NI + FP F N +
Sbjct: 326 GNILQGLP----LEELQINNNI-----------------NRAFP----SFTSQQNSPMVA 360
Query: 422 NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSF 481
+N L LEG+PQ S + N G S R ++WS+A S+ I
Sbjct: 361 PSNLLLLEGNPQS----------SSLPSNPGFSPHFEISKRL-EHWSNAALSTNI----- 404
Query: 482 SLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAP 541
P S+ P L++ A D+
Sbjct: 405 --------------------------------------PQSDVHSKPDT-LEWNAFCDSA 425
Query: 542 CRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINE-- 599
SPL V+ N D P C +T F +N Q++F + +++N+
Sbjct: 426 -------SPL---VNPNLDTNPASLCRNTG---FGSTNA----AQTDFF--YPLQMNQQP 466
Query: 600 ------VQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVP 653
V + + SSN EG LMGQQK Q +++ SL+D+ ++S++ +EQ +
Sbjct: 467 ANNSGPVTEAQLFRSSNPNEGLLMGQQKLQSGLMASDAGSLDDI-VNSLMTQEQSQSDFS 525
Query: 654 EGNF 657
EG++
Sbjct: 526 EGDW 529
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/433 (54%), Positives = 283/433 (65%), Gaps = 73/433 (16%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +L+TLL RCQYHVTTT+QA TAL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+ HGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR+ K+ + S+ G NSD K N+KRK+Q E+E++E+ ++
Sbjct: 131 HVVRKSKLKKNKSSVSN-------------GAANSD---KANRKRKEQYEEEEEEERGNE 174
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
++DPT QKKPRV+W+ ELH KF+AAV+ LG++KAVPKKILDLMNV+KLTRENVASHLQ
Sbjct: 175 --NDDPTAQKKPRVLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKLTRENVASHLQ 232
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGN-YHTVG---GPGQFQN--S 302
K+R+ LK++S ANQQA AAL S ++MSS GLG YH G G GQF +
Sbjct: 233 KFRVALKKMSDKANQQATR-AALES---HLMQMSSHKGLGGFYHHRGIPVGTGQFHGGAT 288
Query: 303 TFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSG 362
R +P++ LGRLN+ AG GM P S P H ND G
Sbjct: 289 MMRHYPSNRNLGRLNSLAG-GMFQ-PVSSSFPRNH--------ND-------------GG 325
Query: 363 NILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVN 422
NILQG+P L++LQ+N NI + FP F N L+
Sbjct: 326 NILQGLPLP-PLEELQINNNI-----------------NKAFP----SFTSQQNSLMVAP 363
Query: 423 NNPLFLEGHPQEA 435
NN L LEGH Q +
Sbjct: 364 NNLLLLEGHQQSS 376
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 564 LGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINE--------VQRSSMQASSNLKEGY 615
+ Q LDTN T F R+ +F S + + +++N+ + + + SSN EG
Sbjct: 427 INQNLDTNTTSFCRNTDFRSTNAAQTDFFYPLQMNQQPTNNSGPMTEAQLFRSSNPNEGL 486
Query: 616 LMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNF 657
LMGQQK + ++++ SL+D+ ++S++ +EQ++ EG++
Sbjct: 487 LMGQQKIKSGFMASDAGSLDDI-VNSLMTQEQNQSDFSEGDW 527
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/373 (52%), Positives = 252/373 (67%), Gaps = 22/373 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C+Y VT S+A AL LLR+NKN FD+V+SDV
Sbjct: 18 DQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDV 77
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVR+E LKNIWQ
Sbjct: 78 HMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQ 137
Query: 129 HVVRRKKIDAKD--QNNSDNQDKPHNGSGQAEGMGNSDQNGKLN-KKRKDQNEDEDDEDD 185
HVVR++K + KD Q D+ D+ + A+ ++++ N K+RKD ED ++ DD
Sbjct: 138 HVVRKRKNEWKDLEQTCVDDVDRQQKTNEDADYSSSANEGSWRNSKRRKDDVEDPEERDD 197
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRENVAS
Sbjct: 198 S--------STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVAS 249
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYL+R+S + Q+N+ S+ ++ +NGL + T+ GQ Q +
Sbjct: 250 HLQKYRLYLRRLSGITQHQSNLNNTFMSAQDAF--GPPLNGL-DLQTLAAAGQLQPQSLA 306
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMR-HAQNSDNTTNDQGKFHPALLPGSHSGNI 364
+ A+G GR A +G+ M ++ R H + +N G L GS N+
Sbjct: 307 TLQAAG-FGRSTAKSGMPM------PLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPMNL 359
Query: 365 LQGMPTSLELDQL 377
L G+PT++E QL
Sbjct: 360 LHGIPTTMEPKQL 372
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 264/389 (67%), Gaps = 26/389 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A TAL LLRENKN FD+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HVVR++K + KD S + D+ S +A+ ++++ N K++ E+E ++ D
Sbjct: 147 HVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRD 206
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+ +T KKPRVVWSVELH++FVAAV+QLGIDKAVPKKIL+LMNV LTRENVAS
Sbjct: 207 DT-------STLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVAS 259
Query: 246 HLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTF 304
HLQKYRLYL+R+S V+ Q N+ + LG + ++ +SS+NG+ + T+ GQ +
Sbjct: 260 HLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGI-DLQTLAVAGQLPAQSL 318
Query: 305 RSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF---HPALLPGSHS 361
+ A+G LGR A AG+ IP+ +N + N + +F P L S
Sbjct: 319 ATLQAAG-LGRSTAKAGVP---------IPLMDQRNLFSFENPRLRFGEGQPQHLSTSKP 368
Query: 362 GNILQGMPTSLELDQLQ-LNKNITSISEL 389
N+L G+PT++E QL L+++ SI L
Sbjct: 369 MNLLHGIPTNMEPKQLANLHQSTQSIGGL 397
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 210/444 (47%), Positives = 295/444 (66%), Gaps = 29/444 (6%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
+ VE+V + FP G+RVLAVDDD TCL LLE L C+Y+VTTT++ + AL+LLRE ++
Sbjct: 7 LEVENVFREDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDM 66
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FDLVISDV MP+MDGFKLLE VGLE+DLP IMLSGN D + VMKG+ GACDYL+KP+R+
Sbjct: 67 FDLVISDVSMPEMDGFKLLEQVGLEIDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRL 126
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
EELKNIWQHVV RKKI++KD+N D + +E + N +N +K K+Q+EDE
Sbjct: 127 EELKNIWQHVV-RKKIESKDRNKGIITDGICSQDTSSENIAN--RNKTRGQKIKEQSEDE 183
Query: 181 DDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
++E++E + ++++ +T+KKPR+VW ELH+KFV+ V+QL +A PKKI DLMNVE LT
Sbjct: 184 EEEEEEAEEDNDEERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLT 240
Query: 240 RENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQF 299
RENVASHLQKY+L LKR S +QA + AAL DP +L+ +SV G G++ T+ G +
Sbjct: 241 RENVASHLQKYKLSLKRPS----KQARVDAAL---DP-HLQKNSVAGYGDFCTLPGSRRI 292
Query: 300 QNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGS 359
+ST ++ +S M RLNAP+GL + G+ SS ++P +QN + + L S
Sbjct: 293 LSSTLPTYASSNMFCRLNAPSGLNLRGMSSSALVPPLQSQNIPS-------YKQPLFFAS 345
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLL 419
S + L+G+ TS+E++Q Q N +L D++ F SSGF D R + + L
Sbjct: 346 ESSSALKGVRTSVEINQFQQNIYPPGNMKLSPIDDSSAFTDSSGFQDIRANVNNANSFLS 405
Query: 420 DVNNNPLFLEGHPQEAHSNKMFGN 443
+++N L + H+++ F N
Sbjct: 406 CISSNHL-------QTHNSRAFIN 422
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 200/377 (53%), Positives = 252/377 (66%), Gaps = 27/377 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A TAL LLRENKN +D+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNS----DQNGKLNKKRKDQNEDEDDED 184
HVVR+K+ + KD S + ++ Q+E S + N + +KKRKD+ E+ D+ D
Sbjct: 147 HVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWRNSKKRKDEEEEGDERD 206
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRENVA
Sbjct: 207 DT--------STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVA 258
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGS-SDPSYLRMSSVNGLGNYHTVGGPGQFQNST 303
SHLQKYRLYL+R+S V+ Q N+ A S + +Y +SS NG+ + T+ GQ +
Sbjct: 259 SHLQKYRLYLRRLSGVSQHQNNLGNAFISPQEATYGPLSSFNGI-DLQTLAATGQLPAQS 317
Query: 304 FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF---HPALLPGSH 360
+ A AGLG + S IP+ +N + N + +F L S
Sbjct: 318 LATLQA----------AGLGRSAVKSRMPIPIVDQRNLFSFENPKLRFGEGQQQQLNNSK 367
Query: 361 SGNILQGMPTSLELDQL 377
N+L G+PTS+E QL
Sbjct: 368 QMNLLHGIPTSMEPKQL 384
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/383 (51%), Positives = 261/383 (68%), Gaps = 14/383 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A TAL LLRENKN FD+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR++K + KD S + ++ G Q + +D + N+ +N + +++E+
Sbjct: 147 HVVRKRKNEWKDAEQSGSAEE---GDRQPKASDEADYSSSANEGSW-RNSKKRRDEEEEA 202
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+ +D +T KKPRVVWSVELH++FVAAV+QLGIDKAVPKKIL+LMNV LTRENVASHLQ
Sbjct: 203 EDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQ 262
Query: 249 KYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSF 307
KYRLYL+R+S V+ Q NM + L + ++ +SS+NG+ + T+ GQ + +
Sbjct: 263 KYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGI-DLQTLAVAGQLPAQSLATL 321
Query: 308 PASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQG 367
A+G LGR AG+ M ++ R+ + +N G+ L S N+L G
Sbjct: 322 QAAG-LGRPTGKAGVPMP------LMDQRNLFSFENPRLRFGEGQQQHLSTSKPMNLLHG 374
Query: 368 MPTSLELDQLQ-LNKNITSISEL 389
+PT++E QL L+++ SI L
Sbjct: 375 IPTNMEPKQLANLHQSTQSIGSL 397
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 254/375 (67%), Gaps = 26/375 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT +A AL LLRENKN FD+V+SDV
Sbjct: 23 DQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDV 82
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 83 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQ 142
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV+R++K +D S + D+P S + +S + +KKR+D++E+ D++DD
Sbjct: 143 HVIRKRKNGLRDVEQSGSVEEGDQPPKVSDDGD-YSSSVNEARSSKKRRDEDEEGDEKDD 201
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+T KKPRVVWSVELH++F+AAVNQLGIDKAVPKKIL+LMNV LTRENVAS
Sbjct: 202 S--------STLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVAS 253
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYL+R+S V+ QQ N+ + SS + +S+NG+ + T+ GQF + +
Sbjct: 254 HLQKYRLYLRRLSGVSQQQGNLNNSFMSSQEATFGGTSINGI-DLQTLSAAGQFPSQSLA 312
Query: 306 SFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPAL---LPGSHSG 362
A+G LGR A AG+ M P+ +N + N + +F L S
Sbjct: 313 KLQATG-LGRTTAKAGVPM---------PLSDQKNLFSFENPRLRFGEGSLQHLSNSKPI 362
Query: 363 NILQGMPTSLELDQL 377
N+L G+PT++E QL
Sbjct: 363 NLLHGIPTNMEPKQL 377
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/374 (51%), Positives = 252/374 (67%), Gaps = 20/374 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLREN+N +D+VISDV
Sbjct: 11 DQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLEL+GLEMDLPVIM+S + +VMKG+THGACDYL+KP+RIE LKNIWQ
Sbjct: 71 HMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNS----DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
HVVR++K + KD S + D+P S A+ ++++ N KR+ E+E DE
Sbjct: 131 HVVRKRKNEWKDLEQSGSVEEGGDRPQKQSEDADYSSSANEGSWKNSKRRKDEEEEADER 190
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D+ +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRENVA
Sbjct: 191 DDT-------STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVA 243
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGS-SDPSYLRMSSVNGLGNYHTVGGPGQFQNST 303
SHLQKYRLYL+R+S V+ Q+ M + S + +Y +SS+NGL + T+ GQ +
Sbjct: 244 SHLQKYRLYLRRLSGVSQHQSGMGNSFISPQEATYGPLSSLNGL-DLQTLAAAGQIPAQS 302
Query: 304 FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGN 363
+ A+G LGR A + M ++ R+ + +N G+ L N
Sbjct: 303 LATLQAAG-LGRSTAKPRMPMP------IVDQRNLFSFENPKLRFGEGQQQHLNNGKQIN 355
Query: 364 ILQGMPTSLELDQL 377
+L G+PT++E QL
Sbjct: 356 LLHGIPTTMEPKQL 369
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/378 (53%), Positives = 252/378 (66%), Gaps = 30/378 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLRENKN FD+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS------DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
HVVR+KK + KD S D Q KP S A+ ++++ N KR+ E+E D
Sbjct: 147 HVVRKKKNEWKDVEQSGSVEEGDRQQKP---SEDADYSSSANEGTWKNSKRRKDEEEETD 203
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
E D+ +T KKPRVVWSVELH++FV AVNQLGIDKAVPKKIL+LMNV LTREN
Sbjct: 204 ERDDS-------STLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKILELMNVPGLTREN 256
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGS-SDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
VASHLQKYRLYL+R+S V+ Q N+ + S + S+ MSS++GL + T+ GQ
Sbjct: 257 VASHLQKYRLYLRRLSGVSQHQNNLGNSFMSPQEASFGAMSSLSGL-DLQTLAVTGQLPA 315
Query: 302 STFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPAL--LPGS 359
+ + A+G LGR +G+ M P+ +N + N + +F L S
Sbjct: 316 QSLATLQAAG-LGRSTIKSGVPM---------PLVDQRNLFSFENPKLRFAEGQHHLSSS 365
Query: 360 HSGNILQGMPTSLELDQL 377
N+L G+PT++E QL
Sbjct: 366 KPMNLLHGIPTTMEAKQL 383
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/319 (57%), Positives = 229/319 (71%), Gaps = 14/319 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT +A AL LLRENKN FD+V+SDV
Sbjct: 23 DQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 82
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + ++VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 83 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQ 142
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HVVR +K +D S + D+P GS +G +S N + K++ ++E DE D
Sbjct: 143 HVVRMRKNGLRDVEQSGSMEEGDRPPKGSD--DGNYSSSVNEAKSSKKRRDEDEEGDERD 200
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+ +T KKPRVVWSVELH++F+A VNQLGIDKAVPKKIL+LMNV LTRENVAS
Sbjct: 201 DS-------STLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKILELMNVPGLTRENVAS 253
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYL+R+S V+ QQ N+ + SS + +S+NG+ + T+ GQF + +
Sbjct: 254 HLQKYRLYLRRLSGVSQQQGNLSNSFMSSQEATFGGTSINGI-DLQTLSAAGQFPSQSLA 312
Query: 306 SFPASGMLGRLNAPAGLGM 324
F A+G LGR A AG+ M
Sbjct: 313 KFQAAG-LGRTTAKAGMPM 330
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 256/402 (63%), Gaps = 25/402 (6%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
++ DQFP+GLRVL VDDDPTCL +LE +L+ C Y VT ++A AL +LRENKN FD+V+
Sbjct: 28 MSSDQFPAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVL 87
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDVHMPDMDGFKLLE VGLEMDLPVIM+S + +VMKG+ HGACDYL+KPVRIE L+N
Sbjct: 88 SDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRN 147
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG--MGNSDQNGKLN--KKRKDQNEDED 181
+WQHVVR++K + KD S + D+ +EG +S G N K+R+D E+ +
Sbjct: 148 LWQHVVRKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPE 207
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
+ DD +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRE
Sbjct: 208 ERDDT--------STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRE 259
Query: 242 NVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
NVASHLQKYRLYL+R+S V+ Q+N+ + + DP + M S NG+ + T+ GQ
Sbjct: 260 NVASHLQKYRLYLRRLSGVSPHQSNLNNSFINPQDPPFGSMGSFNGI-DLQTLSVTGQLS 318
Query: 301 NSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSH 360
+ + A+G L R A +G+ M L + + + + DQ + L S
Sbjct: 319 PQSLAALQATG-LRRPTAKSGISM-ALDQNNIFSFENPK--LRFVEDQTQH----LNNSK 370
Query: 361 SGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSS 402
N+ G+PT +E QL NI S P N ++ S
Sbjct: 371 PVNLFHGIPTKMEPKQL---ANIQHPSVQPQGNINMQLNIKS 409
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 272/424 (64%), Gaps = 22/424 (5%)
Query: 4 EHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
E V + FP G+RVLAVDDD T L +LE L C+Y+VTTT++++ AL+LLRE ++ FDL
Sbjct: 10 EDVTEEGFPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDL 69
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+ISDV+MP+MDGFKLLE VGLEMDLP IMLSG+ D + VMKG+ GACDYL+KP+R+EEL
Sbjct: 70 IISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEEL 129
Query: 124 KNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN-KKRKDQNEDEDD 182
KNIWQHVV RKKI++KDQN D SGQ N + K + +KRK+Q+E+E+
Sbjct: 130 KNIWQHVV-RKKIESKDQNQGIISD---GVSGQDTSSENIPKKNKTHGRKRKEQSEEEEA 185
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+ DE++ +T+KKPR VW ELH+KFV+ VN LG+DKA PKKI DLMNVE LTREN
Sbjct: 186 DTDEENDEEH--STRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTREN 243
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS 302
VASHLQKYRL LKR S +QA + AAL DP + SV G G++ T+ G + +S
Sbjct: 244 VASHLQKYRLSLKRPS----KQAKVDAAL---DP-LQQKGSVRGYGDFCTLPGSRRILSS 295
Query: 303 TFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSG 362
T ++ +SGM RLNAP+ L + S +P +QN + F + S S
Sbjct: 296 TLPTYASSGMFCRLNAPSSLNFRRMSPSAPVPPLQSQNILS-------FKQPMFSASESL 348
Query: 363 NILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVN 422
+ QG+ TS E++Q Q N L + F VSSGF D R + + L ++
Sbjct: 349 SFSQGVRTSAEINQFQRNIYPLGNKNLNPIDYTSAFTVSSGFQDIRDTVNNANSSLSCIS 408
Query: 423 NNPL 426
+N L
Sbjct: 409 SNNL 412
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 220/313 (70%), Gaps = 6/313 (1%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
V DQFP+GLRVL VDDD TCL +LE +LRRC YHVTT SQA AL +LRE K FD+V+
Sbjct: 24 VVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVL 83
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDVHMPDMDG+KLLE VGLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EELKN
Sbjct: 84 SDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKN 143
Query: 126 IWQHVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
IWQHVVR+K + K+ +S ++ D+ G AE + ++ + K + + D D
Sbjct: 144 IWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKD 203
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
EDD + N EDP+T KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTREN
Sbjct: 204 EDDGELEN-EDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 262
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS 302
VASHLQK+RLYLKR+S VA QQ + + +++ S+ G + + GQ
Sbjct: 263 VASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSL-GRFDIQALAASGQIPPQ 321
Query: 303 TFRSFPASGMLGR 315
T + A +LGR
Sbjct: 322 TLAALQAE-LLGR 333
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/374 (51%), Positives = 251/374 (67%), Gaps = 20/374 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLREN+N +D+VISDV
Sbjct: 21 DQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDV 80
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLEL+GLEMDLPVIM+S + +VMKG+THGACDYL+KP+RIE LKNIWQ
Sbjct: 81 HMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQ 140
Query: 129 HVVRRKKIDAKDQNNS----DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
HVVR++K + KD S + D+ S A+ ++++ N KR+ E+E DE
Sbjct: 141 HVVRKRKNEWKDLEQSGSVEEGGDRQQKQSEDADYSSSANEGSWKNSKRRKDEEEEADER 200
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D+ +T KKPRVVWSVELH++FVAAV+QLGIDKAVPKKIL+LMNV LTRENVA
Sbjct: 201 DDT-------STLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILELMNVPGLTRENVA 253
Query: 245 SHLQKYRLYLKRISCVANQQANMV-AALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNST 303
SHLQKYRLYL+R+S V+ Q+ M + + + +Y +SS+NGL + T+ GQ +
Sbjct: 254 SHLQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGL-DLQTLAAAGQIPAQS 312
Query: 304 FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGN 363
+ A+G LGR A + M ++ R+ + +N G+ L N
Sbjct: 313 LATLQAAG-LGRSTAKPRMPMP------IVDQRNLFSFENPKLRFGEGQQQHLNNGKQIN 365
Query: 364 ILQGMPTSLELDQL 377
+L G+PT++E QL
Sbjct: 366 LLHGIPTTMEPKQL 379
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 188/370 (50%), Positives = 251/370 (67%), Gaps = 12/370 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C+Y VT ++A AL LLRENKN +D+VISDV
Sbjct: 28 DQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDV 87
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KP+RIE LKNIWQ
Sbjct: 88 HMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQ 147
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR++K + KD S + ++ G Q + ++D + N+ +N +++E+
Sbjct: 148 HVVRKRKNEWKDLEQSGSVEE--GGDRQQKQPEDADYSSSANEGSW-KNSKRRKDEEEEA 204
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+D + KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRENVASHLQ
Sbjct: 205 EERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQ 264
Query: 249 KYRLYLKRISCVANQQANMVAALGS-SDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSF 307
KYRLYL+R+S V+ Q M ++ S + +Y +SS+NGL + T+ GQ + +
Sbjct: 265 KYRLYLRRLSGVSQHQNGMGSSFISPQEATYGPLSSLNGL-DLQTLATAGQLPAQSLATL 323
Query: 308 PASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQG 367
A+G LGR A + M ++ R+ + +N G+ L N+L G
Sbjct: 324 QAAG-LGRSTAKPRMPMP------IVDQRNLFSFENPKLRFGEGQQQHLNNGKQTNLLHG 376
Query: 368 MPTSLELDQL 377
+PT++E +QL
Sbjct: 377 IPTTMEPNQL 386
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 179/339 (52%), Positives = 225/339 (66%), Gaps = 34/339 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP+GLRVLAVDDDPTCL +L +LR+C Y VT ++A AL LLRENK++FDL+ISDV
Sbjct: 19 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 78
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDGFKLLE VGLEMDLPVIM S NG+ +VMKG+ HGACDYL+KPVR EEL+NIWQH
Sbjct: 79 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 138
Query: 130 VVRRKKIDAKDQNNSDNQD--------------------------KPHNGSGQAEGMGNS 163
VVR+K+ +A+D S + + G ++G G
Sbjct: 139 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 198
Query: 164 DQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDK 223
D N KL K+RK DD D+ +H+++D +T KK RVVWSVELH++FV AVNQLGIDK
Sbjct: 199 DPNWKLAKRRK------DDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDK 252
Query: 224 AVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMS 282
AVPKKIL+ M+V LTRENVASHLQKYRLYL+R+S V Q + A+ P+ +
Sbjct: 253 AVPKKILESMSVHGLTRENVASHLQKYRLYLRRLSGVQPQGSGANGHAVTFCSPAEASFA 312
Query: 283 SVNGLGNYHTVGGPGQFQNSTFRSFPA-SGMLGRLNAPA 320
++N LG T+ QFQNS+ + + G LGR A A
Sbjct: 313 ALNALGEMRTLPPSAQFQNSSPTALASIQGNLGRTGAAA 351
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 192/389 (49%), Positives = 245/389 (62%), Gaps = 39/389 (10%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VDDDPTCL++LE +L C Y VT ++A AL LLR+NKN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVIS 79
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVRIE LKNI
Sbjct: 80 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139
Query: 127 WQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
WQHVVR+K+ D +D+ +D +N S EG N + +
Sbjct: 140 WQHVVRKKRNDWNVSEHSGGSIEDTGGDRDRQQQQREDADNNSSSINEG------NWRSS 193
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKIL 230
+KRK++ DE +D ED ++ KKPRVVWSVELH++FVAAVNQLG+DKAVPKKIL
Sbjct: 194 RKRKEEEVDEQGDDKEDT------SSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 231 DLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMV-AALGSSDPSYLRMSSVNGLGN 289
++MNV LTRENVASHLQKYR+YL+R+ V+ Q NM + + D S+ +SS+NG
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGHLSSLNGF-- 305
Query: 290 YHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 349
+ GQ + F A+G LGR L GL S ++ R N +N G
Sbjct: 306 --DLAVAGQLPAQSLAQFQAAG-LGR----PTLTKPGLSVSPLVDQRTIFNFENPKIRFG 358
Query: 350 KFH-PALLPGSHSGNILQGMPTSLELDQL 377
H P + G+ N+L G+PT +E Q
Sbjct: 359 DGHGPMMNNGNKQMNLLHGVPTGMEPKQF 387
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/370 (50%), Positives = 249/370 (67%), Gaps = 12/370 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C+Y VT ++A AL LLRENKN +D+VISDV
Sbjct: 28 DQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDV 87
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KP+RIE LKNIWQ
Sbjct: 88 HMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQ 147
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR++K + +D S + ++ G Q + ++D + N+ +N +++E+
Sbjct: 148 HVVRKRKNEWRDLEQSGSVEE--GGDRQQKQPEDADYSSSANEGSW-KNSKRRKDEEEET 204
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+D + KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTRENVASHLQ
Sbjct: 205 EERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQ 264
Query: 249 KYRLYLKRISCVANQQANMVAALGS-SDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSF 307
KYRLYL+R+S V+ Q M + S + +Y +SS+NGL + T+ GQ + +
Sbjct: 265 KYRLYLRRVSGVSQHQNGMGSTFISPQEATYGPLSSLNGL-DLQTLATAGQLPAQSLATL 323
Query: 308 PASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQG 367
A+G LGR A + M ++ R+ + +N G+ L N+L G
Sbjct: 324 QAAG-LGRSTAKPRMPMP------IVDQRNLFSFENPKLRFGEGQQQHLNNGKQTNLLHG 376
Query: 368 MPTSLELDQL 377
+PT++E QL
Sbjct: 377 IPTTMEPKQL 386
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 220/313 (70%), Gaps = 6/313 (1%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
V DQFP+GLRVL VDDD TCL +LE +LRRC YHVTT SQA AL +LRE K FD+V+
Sbjct: 24 VVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVL 83
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDVHMPDMDG+KLLE VGLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EELKN
Sbjct: 84 SDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKN 143
Query: 126 IWQHVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
IWQHVVR+K + K+ +S ++ D+ G AE + ++ + K + + D D
Sbjct: 144 IWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKD 203
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
EDD + N EDP+T KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTREN
Sbjct: 204 EDDGELEN-EDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 262
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS 302
VASHLQK+RLYLKR+S VA QQ + + +++ S+ G + + GQ
Sbjct: 263 VASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSL-GRFDIQALAASGQIPPQ 321
Query: 303 TFRSFPASGMLGR 315
T + A +LGR
Sbjct: 322 TLAALQAE-LLGR 333
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 226/331 (68%), Gaps = 28/331 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDD TCL LLE + RRC YHVTT SQA ALKLLRE K FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIM+S +G VM+GI+HGACDYL+KP+R EELKNIWQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQ 151
Query: 129 HVVRRKKIDAKDQNNS-----DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE 183
HV+R+K + K+Q +S +++ K N + A + + +K++ +DEDD
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDEDDA 211
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+ E+D DP+ +KPRVVWSVELH++FV+AVN LGIDKAVPK+IL+LMNV LTRENV
Sbjct: 212 ELEND----DPSASRKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENV 267
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSS---VNGLGNY--HTVGGPGQ 298
ASHLQK+RLYLKR+S VA Q G S+P + S +N LG + + GQ
Sbjct: 268 ASHLQKFRLYLKRLSGVAQQG-------GISNPFCGLLDSNVKLNPLGRFDIQVLAASGQ 320
Query: 299 FQNSTFRS-------FPASGMLGRLNAPAGL 322
T + PA GM+ ++ PA L
Sbjct: 321 IPPQTLAAPHAELFGHPAGGMVTTVDQPALL 351
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/339 (52%), Positives = 225/339 (66%), Gaps = 34/339 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP+GLRVLAVDDDPTCL +L +LR+C Y VT ++A AL LLRENK++FDL+ISDV
Sbjct: 9 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 68
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDGFKLLE VGLEMDLPVIM S NG+ +VMKG+ HGACDYL+KPVR EEL+NIWQH
Sbjct: 69 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 128
Query: 130 VVRRKKIDAKDQNNSDNQD--------------------------KPHNGSGQAEGMGNS 163
VVR+K+ +A+D S + + G ++G G
Sbjct: 129 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 188
Query: 164 DQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDK 223
D N KL K+RK DD D+ +H+++D +T KK RVVWSVELH++FV AVNQLGIDK
Sbjct: 189 DPNWKLAKRRK------DDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDK 242
Query: 224 AVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMS 282
AVPKKIL+ M+V LTRENVASHLQKYRLYL+R+S V Q + A+ P+ +
Sbjct: 243 AVPKKILESMSVHGLTRENVASHLQKYRLYLRRLSGVQPQGSGANGHAVTFCSPADASFA 302
Query: 283 SVNGLGNYHTVGGPGQFQNSTFRSFPA-SGMLGRLNAPA 320
++N LG T+ QFQNS+ + + G LGR A A
Sbjct: 303 ALNALGEMRTLPPSAQFQNSSPTALASIQGNLGRTGAAA 341
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 219/314 (69%), Gaps = 14/314 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP GLRVL VDDD CL +LE +LR+C+Y VTT +QA AL LLRE + FD+V+SDV
Sbjct: 17 DTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGSFDVVLSDV 76
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLP+IM+SG+G LVM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 77 HMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRDEELKNIWQ 136
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGN----SDQNGKLNKKRKDQNEDED 181
HVVR+K +K+ S D+ D+ G+ AE + +D+ K KK++D
Sbjct: 137 HVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRVLKPQKKKRDAK---- 192
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
E+DE + ++DPTT KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRE
Sbjct: 193 -EEDETEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 251
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQK+RLYLKR+S VA QQ + ++ S+ G + + GQ
Sbjct: 252 NVASHLQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQNPKLGSL-GRFDIQALAASGQIPP 310
Query: 302 STFRSFPASGMLGR 315
T + A +LGR
Sbjct: 311 ETLTALHAE-LLGR 323
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 199/385 (51%), Positives = 249/385 (64%), Gaps = 40/385 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A TAL LLR NK+ FD+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS------DNQDKPHN----GSGQAEGMGNSDQNGKLNKKRKDQNE 178
HVVR++K + KD S D Q KP S EG N K +K+RKD+ +
Sbjct: 147 HVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSANEG------NWKNSKRRKDEED 200
Query: 179 DEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL 238
D ++ DD +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV L
Sbjct: 201 DAEERDDT--------STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGL 252
Query: 239 TRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYHTVGGPG 297
TRENVASHLQKYRLYL+R+S V+ Q + + +G + ++ +SS+NGL + T+ G
Sbjct: 253 TRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQTLAVAG 311
Query: 298 QFQNSTFRSFPASGMLGRLNAPAGLGM-----HGLPSSGMIPMRHAQNSDNTTNDQGKFH 352
Q + + A+G LGR +GL M L S R+ +
Sbjct: 312 QLPAQSLATLQAAG-LGRSTGKSGLPMPLVDQRNLFSFEAPKFRYGEGQQQQQ------- 363
Query: 353 PALLPGSHSGNILQGMPTSLELDQL 377
L S N+L G+PT++E QL
Sbjct: 364 -QLSNSSKQMNLLHGIPTTMEPKQL 387
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 204/415 (49%), Positives = 261/415 (62%), Gaps = 38/415 (9%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT ++A TAL LLR NK+ FD+VISDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS------DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
HVVR++K + KD S D Q KP + ++ N K +K+RKD+ +D ++
Sbjct: 147 HVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSA--NEGNWKNSKRRKDEEDDAEE 204
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+D +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV LTREN
Sbjct: 205 R--------DDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTREN 256
Query: 243 VASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
VASHLQKYRLYL+R+S V+ Q + + +G + ++ +SS+NGL + T+ GQ
Sbjct: 257 VASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQTLAVAGQLPA 315
Query: 302 STFRSFPASGMLGRLNAPAGLGM-----HGLPSSGMIPMRHAQNSDNTTNDQGKFHPALL 356
+ + A+G LGR +GL M L S R+ + L
Sbjct: 316 QSLATLQAAG-LGRSTGKSGLPMPLVDQRNLFSFEAPKFRYGEGQQQQQ--------QLS 366
Query: 357 PGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGF 411
S N+L G+PT++E QL ++ L N T VSS +R GF
Sbjct: 367 NSSKQMNLLHGIPTTMEPKQLATLRHSAQAQIL-----NETTEVSSEIKGSR-GF 415
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 180/313 (57%), Positives = 221/313 (70%), Gaps = 13/313 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDD TCL +LE +LRRC YHVTT SQA AL LLRE K FD+V+SDV
Sbjct: 37 DQFPAGLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDV 96
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 97 HMPDMDGFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 156
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMG--NSDQNGKLN-KKRKDQNEDEDD 182
HVVR+K + K+ +S ++ D+ G+ AE N G L +KR+ ++DEDD
Sbjct: 157 HVVRKKWHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDD 216
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+ + D DP+T KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTREN
Sbjct: 217 GEPDSD----DPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 272
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS 302
VASHLQK+RLYLKR+S VA Q G D S ++++S+ G + + GQ
Sbjct: 273 VASHLQKFRLYLKRLSGVAQQGGISSTFCGPMD-SNVKLNSL-GRFDIQALAASGQIPPQ 330
Query: 303 TFRSFPASGMLGR 315
T + A + GR
Sbjct: 331 TLAALHAE-LFGR 342
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 226/325 (69%), Gaps = 35/325 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVL VDDD T L +LE +LRRC+Y+VTT +A TAL LLRE+KN FDLVISDV
Sbjct: 29 DQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDV 88
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLELVGLEMDLPVIM+S +GD VMKGITHGACDYLLKPVR+EEL+NIWQ
Sbjct: 89 YMPDMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQ 148
Query: 129 HVVRRKKIDAKDQN--NSDNQDKPHNGSG-QAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
H+VR++K +A++ DK G G E + ++ +KKRKD E ED+
Sbjct: 149 HLVRKRKNEARETETLTPAEADKLKGGGGDDVEHLSSA-----CSKKRKDVKE----EDE 199
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
DH+ EDP++ KKPRVVWSVELH++FV AVN+L IDKAVPKKIL+LM+V LTRENVAS
Sbjct: 200 GVDHDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVAS 259
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRIS Q + + G+ P V G G+ G F + +
Sbjct: 260 HLQKYRLYLKRISAQQPQNSAGFSFGGADGP-------VEGRGH-------GSF---SLQ 302
Query: 306 SFPA--SGMLGRL----NAPAGLGM 324
+ PA G++GR+ N PA +
Sbjct: 303 AVPAVQQGVIGRIGTTNNLPASTAL 327
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/396 (48%), Positives = 255/396 (64%), Gaps = 39/396 (9%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VDDDPTCL++LE +L C Y VT ++A +AL LLR+NKN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVIS 79
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVRIE LKNI
Sbjct: 80 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139
Query: 127 WQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
WQHVVR+K+ + +D+ +D +N S EG NG+ +
Sbjct: 140 WQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG------NGRSS 193
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKIL 230
+KRK+ E+ DD+ D+ ED ++ KKPRVVWSVELH++FVAAVNQLG+DKAVPKKIL
Sbjct: 194 RKRKE--EEVDDQGDD----KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 231 DLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGN 289
++MNV LTRENVASHLQKYR+YL+R+ V+ Q NM + + D S+ +SS+NG +
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGF-D 306
Query: 290 YHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 349
++ GQ + A+G LGR L G+ S ++ R N +N G
Sbjct: 307 LQSLAVTGQLPPQSLAQLQAAG-LGR----PTLAKPGMSVSPLVDQRSIFNFENPKIRFG 361
Query: 350 KFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITS 385
H + ++GN+L G+PT + +L+ +N+ S
Sbjct: 362 DGHGQTM---NNGNLLHGVPTGSHM-RLRPGQNVQS 393
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 218/311 (70%), Gaps = 21/311 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDD TCL LLE +LRRC YHVTT SQA ALKLLRE K FD+V+SDV
Sbjct: 3 DQFPAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDV 62
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIM+S +G VM+GI+HGACDYL+KP+R EELKNIWQ
Sbjct: 63 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQ 122
Query: 129 HVVRRKKIDAKDQNNS-----DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE 183
HV+R+K + K+Q +S +++ K N + A + + +K++ +DEDD
Sbjct: 123 HVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDEDDA 182
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+ E+D DP+ KKPRVVWSVELH++FV+AVN LGIDKAVPK+IL+LMNV LTRENV
Sbjct: 183 ELEND----DPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENV 238
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSS---VNGLGNY--HTVGGPGQ 298
ASHLQK+RLYLKR+S VA Q G S+P + S +N LG + + GQ
Sbjct: 239 ASHLQKFRLYLKRLSGVAQQG-------GISNPFCGLLDSNVKLNPLGRFDIQVLAASGQ 291
Query: 299 FQNSTFRSFPA 309
T + A
Sbjct: 292 IPPQTLAALHA 302
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/298 (59%), Positives = 210/298 (70%), Gaps = 18/298 (6%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
GDQFP+GLRVL VDDD TCL +L+ +L RC Y VTT A AL +LRENK +FD+V+SD
Sbjct: 11 GDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSD 70
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
V MPDMDGFKLLELVGLEMDLPVIM+S NG+ LVMKGI HGACDYLLKP+RI+ELKNIW
Sbjct: 71 VCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIW 130
Query: 128 QHVVRRKKIDAKDQNNSDN---QDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
QHV RRK+ KD + +D+ + KP G + K K+ K+ +DE+ E
Sbjct: 131 QHVFRRKRNILKDADGADHDRQKRKPDEGDSMPAAGSAAAAGSKKRKEIKE--DDEEFEL 188
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D DD N T KKPRVVWSVELH++FV AVNQLGIDKAVPK+IL+LMNV+ LTRENVA
Sbjct: 189 DMDDSN-----TLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVA 243
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNY--HTVGGPGQFQ 300
SHLQKYRLYLKR+S Q A ++ SDPSY N + N H + PG Q
Sbjct: 244 SHLQKYRLYLKRLSVAQQQNAVTMSMPLGSDPSY------NAIDNLQPHPIITPGSSQ 295
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/318 (55%), Positives = 224/318 (70%), Gaps = 13/318 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT +A AL LLRENKN FD+V+SDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HVVR++K KD S D +D+ S A +S GK +KKR+D+ ++ DD
Sbjct: 147 HVVRKRKNSWKDLRQSGGLDERDREKKASTDAN-YSSSTNEGKSSKKRRDEEDEADDR-- 203
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+D +T KKPRVVWS+ELH++F+A VNQLG+DKAVPKKI+++MNV LTRENVAS
Sbjct: 204 ------DDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVAS 257
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYL+R+S V+ QQ+N+ + S+ S +SVN + + T+ GQF +
Sbjct: 258 HLQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEI-DLQTLSASGQFSAQSLA 316
Query: 306 SFPASGMLGRLNAPAGLG 323
A+G+ N+ G
Sbjct: 317 KLQAAGLYSPENSKLRFG 334
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 178/298 (59%), Positives = 210/298 (70%), Gaps = 18/298 (6%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
GDQFP+GLRVL VDDD TCL +L+ +L RC Y VTT A AL +LRENK +FD+V+SD
Sbjct: 11 GDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSD 70
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
V MPDMDGFKLLELVGLEMDLPVIM+S NG+ LVMKGI HGACDYLLKP+RI+ELKNIW
Sbjct: 71 VCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIW 130
Query: 128 QHVVRRKKIDAKDQNNSDN---QDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
QHV RRK+ KD + +D+ + KP G +KKRK+ ED D
Sbjct: 131 QHVFRRKRNILKDADGADHDRQKRKPDEGDSMPA---AGSAAAAGSKKRKEIKED----D 183
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
DE + + +D T KKPRVVWSVELH++FV AVNQLGIDKAVPK+IL+LMNV+ LTRENVA
Sbjct: 184 DEFELDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVA 243
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNY--HTVGGPGQFQ 300
SHLQKYRLYLKR+S Q A ++ SDPSY N + N H + PG Q
Sbjct: 244 SHLQKYRLYLKRLSVAQQQNAVTMSMPLGSDPSY------NAIDNLQPHPIITPGSSQ 295
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/396 (47%), Positives = 254/396 (64%), Gaps = 39/396 (9%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VD DPTCL++LE +L C Y VT ++A +AL LLR+NKN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVIS 79
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVRIE LKNI
Sbjct: 80 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139
Query: 127 WQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
WQHVVR+K+ + +D+ +D +N S EG NG+ +
Sbjct: 140 WQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG------NGRSS 193
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKIL 230
+KRK+ E+ DD+ D+ ED ++ KKPRVVWSVELH++FVAAVNQLG+DKAVPKKIL
Sbjct: 194 RKRKE--EEVDDQGDD----KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 231 DLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMV-AALGSSDPSYLRMSSVNGLGN 289
++MNV LTRENVASHLQKYR+YL+R+ V+ Q NM + + D S+ +SS+NG +
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGF-D 306
Query: 290 YHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 349
++ GQ + A+G LGR L G+ S ++ R N +N G
Sbjct: 307 LQSLAVTGQLPPQSLAQLQAAG-LGR----PTLAKPGMSVSPLVDQRSIFNFENPKIRFG 361
Query: 350 KFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITS 385
H + ++GN+L G+PT + +L+ +N+ S
Sbjct: 362 DGHGQTM---NNGNLLHGVPTGSHM-RLRPGQNVQS 393
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/386 (47%), Positives = 245/386 (63%), Gaps = 43/386 (11%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL +LE +L+ C Y VT ++A ALKLLR+N+N +D+VISDV
Sbjct: 30 DQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGYDIVISDV 89
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 90 HMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 149
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR+ K + K +K + SG E ++++ NED D ++
Sbjct: 150 HVVRKGKHEWK--------EKDYEQSGSVED----------GERQQKPNEDVDYSSSANE 191
Query: 189 HNHED----------------PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDL 232
N ++ +T KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+L
Sbjct: 192 GNWKNSKKRKDDEEDQEEKDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILEL 251
Query: 233 MNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGNYH 291
MNV LTRENVASHLQKYRLYL+R+S V+ Q + + +G+ D ++ MSS+NGL ++
Sbjct: 252 MNVPGLTRENVASHLQKYRLYLRRVSGVSQHQNGLNNSFMGTPDATFGSMSSINGL-DFQ 310
Query: 292 TVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF 351
+ GQ + S A+ +GR + + M ++ R+ + + G+
Sbjct: 311 ALAATGQIPAQSLASLQAAA-IGRPTSKPTISMP------VVDQRNLFSFEPHKLRFGEG 363
Query: 352 HPALLPGSHSGNILQGMPTSLELDQL 377
L + ++L G+PT++E QL
Sbjct: 364 QQQLNGSTKQISLLHGIPTNMEPKQL 389
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/381 (49%), Positives = 245/381 (64%), Gaps = 38/381 (9%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VDDDPTCL++LE +L C Y VT ++A AL LLR+NKN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVIS 79
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVRIE LKNI
Sbjct: 80 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139
Query: 127 WQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
WQHVVR+K+ + +D+ +D +N S EG NG+ +
Sbjct: 140 WQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG------NGRSS 193
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKIL 230
+KRK+ E+ DD+ D+ ED ++ KKPRVVWSVELH++FVAAVNQLG+DKAVPKKIL
Sbjct: 194 RKRKE--EEVDDQGDD----KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 231 DLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGLGN 289
++MNV LTRENVASHLQKYR+YL+R+ V+ Q M + + D S+ +SS+NG +
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGIMNHSFMTGQDQSFGPLSSLNGF-D 306
Query: 290 YHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 349
++ GQ + A+G LGR L G+ S ++ R N +N G
Sbjct: 307 LQSLAVTGQLPPQSLAQLQAAG-LGR----PTLAKPGMSVSPLVDQRSIFNFENPKIRFG 361
Query: 350 KFHPALLPGSHSGNILQGMPT 370
H + ++GN+L G+PT
Sbjct: 362 DGHGQTM---NNGNLLHGVPT 379
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 199/262 (75%), Gaps = 12/262 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDD TCL LLE +L RC Y+VTT SQA ALKLLRE K FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 151
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNG----KLNKKRKDQNEDED 181
HV+R+K + K+Q +S ++ D G+ E + ++ K KKR E++D
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDD 211
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
+E + D DP+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRE
Sbjct: 212 NELEID-----DPSASKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 266
Query: 242 NVASHLQKYRLYLKRISCVANQ 263
NVASHLQK+RLYLKR+S VA Q
Sbjct: 267 NVASHLQKFRLYLKRLSGVAQQ 288
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/262 (62%), Positives = 199/262 (75%), Gaps = 12/262 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDD TCL LLE +L RC Y+VTT SQA ALKLLRE K FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLELVGLEMDLPVIM+S +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQ 151
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNG----KLNKKRKDQNEDED 181
HV+R+K + K+Q +S ++ D G+ E + ++ K KKR E++D
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDD 211
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
+E + D DP+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRE
Sbjct: 212 NELEID-----DPSASKKPRVVWSVELHQQFVSAVNQLGIDEAVPKRILELMNVPGLTRE 266
Query: 242 NVASHLQKYRLYLKRISCVANQ 263
NVASHLQK+RLYLKR+S VA Q
Sbjct: 267 NVASHLQKFRLYLKRLSGVAQQ 288
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 13/306 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL++LE +LR C Y VT +A AL LLRENKN FD+V+SDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE +GLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HVVR++K KD S D +D+ S A +S GK +KKR+D+ ++ DD
Sbjct: 147 HVVRKRKNSWKDLRQSGGLDERDREKKASTDAN-YSSSTNEGKSSKKRRDEEDEADDR-- 203
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
+D +T KKPRVVWS+ELH++F+A VNQLG+DKAVPKKI+++MNV LTRENVAS
Sbjct: 204 ------DDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVAS 257
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
LQKYRLYL+R+S V+ QQ+N+ + S+ S +SVN + + T+ GQF +
Sbjct: 258 RLQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEI-DLQTLSASGQFSAQSLA 316
Query: 306 SFPASG 311
A+G
Sbjct: 317 KLQAAG 322
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 198/286 (69%), Gaps = 18/286 (6%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G FP G++VL VDDDPTCL++L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAEARGADFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 120
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKD 175
EELKNIWQHVVR+K KD +S + D +P N + N +G K
Sbjct: 121 EELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW----KS 176
Query: 176 QNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNV 235
Q + + EDDE D DP+T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMNV
Sbjct: 177 QKKKREKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNV 236
Query: 236 EKLTRENVASHLQKYRLYLKRIS---------CVANQQANMVAALG 272
LTRENVASHLQK+RLYLKRI+ VA+ + VA LG
Sbjct: 237 PGLTRENVASHLQKFRLYLKRIAQHHAGIPHPFVASASSAKVAPLG 282
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 263/411 (63%), Gaps = 29/411 (7%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
V +V G+ FP+G+RVLAVDDDPT L +LE L C Y+VTTT++ + AL+LLRE K+ FD
Sbjct: 12 VVNVLGEGFPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFD 71
Query: 63 LVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
LVISDV MPDMDGFKLLE VGLEMDLP IMLS N D + VMK + HGAC+YL+KP+R+EE
Sbjct: 72 LVISDVSMPDMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEE 131
Query: 123 LKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
LK+IWQHVV RKKI++KDQN D + +E + N +N +KRK+Q E+E+
Sbjct: 132 LKSIWQHVV-RKKIESKDQNQGIISDGVYGQDTSSENIAN--KNKMHGRKRKEQTEEEEA 188
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-------KAVPKKILDLMNV 235
E D D E +T+KKPR+VW ELHRKFV+AVN +G+D +A PKKILDLMNV
Sbjct: 189 EQDND----EKCSTRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNV 244
Query: 236 EKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGG 295
E LTRENV+SHLQ+YR+ +K +S +Q AL DP Y + SV G G++ T+ G
Sbjct: 245 EGLTRENVSSHLQRYRIDIKWLS----KQDRGDDAL---DP-YQQKGSVGGYGDFCTLSG 296
Query: 296 PGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPAL 355
+ +S ++ ++ M RLNAP+ L + G+ SS ++P + N N F +
Sbjct: 297 STRVLSSILPAYASNDMFCRLNAPSSLNLEGMSSSALVPPLQSHNIPN-------FETPM 349
Query: 356 LPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPD 406
S S + + G+ TS++++Q Q N + L D+ SS F D
Sbjct: 350 FSESESSSSVHGIQTSMDINQFQQNIYLPDNINLSPIDDSNAVTDSSSFQD 400
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 198/286 (69%), Gaps = 18/286 (6%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G FP G++VL VDDDPTCL++L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAEARGADFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 120
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKD 175
EELKNIWQHVVR+K KD +S + D +P N + N +G K
Sbjct: 121 EELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW----KS 176
Query: 176 QNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNV 235
Q + + EDDE D DP+T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMNV
Sbjct: 177 QKKKREKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNV 236
Query: 236 EKLTRENVASHLQKYRLYLKRIS---------CVANQQANMVAALG 272
LTRENVASHLQK+RLYLKRI+ VA+ + VA LG
Sbjct: 237 PGLTRENVASHLQKFRLYLKRIAQHHAGIPHPFVASASSAKVAPLG 282
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 247/390 (63%), Gaps = 35/390 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 91 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 150
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMGNS-----DQNGKLN------ 170
HVVR+++ + + + Q + H G G + D + +N
Sbjct: 151 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 210
Query: 171 ---KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
+KRKD+ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG++KAVPK
Sbjct: 211 SSSRKRKDE-EGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPK 265
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNG 286
KIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 266 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 325
Query: 287 LGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN 346
+ + GQ + A+G LGR PA + GLP S ++ R + DNT
Sbjct: 326 F-DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKT 380
Query: 347 DQGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 381 RFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 410
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 247/390 (63%), Gaps = 35/390 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 91 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 150
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMGNS-----DQNGKLN------ 170
HVVR+++ + + + Q + H G G + D + +N
Sbjct: 151 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 210
Query: 171 ---KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
+KRKD+ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG++KAVPK
Sbjct: 211 SSSRKRKDE-EGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPK 265
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNG 286
KIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 266 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 325
Query: 287 LGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN 346
+ + GQ + A+G LGR PA + GLP S ++ R + DNT
Sbjct: 326 F-DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKT 380
Query: 347 DQGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 381 RFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 410
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 247/390 (63%), Gaps = 35/390 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 91 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 150
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMGNS-----DQNGKLN------ 170
HVVR+++ + + + Q + H G G + D + +N
Sbjct: 151 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 210
Query: 171 ---KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
+KRKD+ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG++KAVPK
Sbjct: 211 SSSRKRKDE-EGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPK 265
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNG 286
KIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 266 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 325
Query: 287 LGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN 346
+ + GQ + A+G LGR PA + GLP S ++ R + DNT
Sbjct: 326 F-DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKT 380
Query: 347 DQGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 381 RFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 410
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 244/389 (62%), Gaps = 33/389 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 91 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 150
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMG-------------NSDQNGK 168
HVVR+++ + + + Q + H G G + N N +
Sbjct: 151 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 210
Query: 169 LNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
+ +++ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG++KAVPKK
Sbjct: 211 SSSRKRKDEEGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNGL 287
IL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 267 ILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGF 326
Query: 288 GNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTND 347
+ + GQ + A+G LGR PA + GLP S ++ R + DNT
Sbjct: 327 -DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKTR 381
Query: 348 QGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 382 FGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 410
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 200/287 (69%), Gaps = 19/287 (6%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G +FP G++VL VDDDPTCLL+L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAEARGGEFPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 120
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKD 175
EELKNIWQHVVR+K + KD +S + D +P N + N +G K
Sbjct: 121 EELKNIWQHVVRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW----KS 176
Query: 176 QNEDEDDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
Q + + EDDE D + DP +T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMN
Sbjct: 177 QKKKREKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMN 236
Query: 235 VEKLTRENVASHLQKYRLYLKRIS---------CVANQQANMVAALG 272
V LTRENVASHLQK+RLYLKRI+ VA + VA LG
Sbjct: 237 VPGLTRENVASHLQKFRLYLKRIAQHHAGIPHPFVAPASSAKVAPLG 283
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/319 (56%), Positives = 219/319 (68%), Gaps = 35/319 (10%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL VDDD T L +LE +LRRC+Y+VTT +A TAL LLRE+KN FDLVISDV+MPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
GFKLLELVGLEMDLPVIM+S +GD VMKGITHGACDYLLKPVR+EEL+NIWQH+VR++
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 135 KIDAKDQN--NSDNQDKPHNGSG-QAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNH 191
K +A++ DK G G E + ++ +KKRKD E ED+ DH+
Sbjct: 121 KNEARETETLTPAEADKLKGGGGDDVEHLSSA-----CSKKRKDVKE----EDEGVDHDS 171
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
EDP++ KKPRVVWSVELH++FV AVN+L IDKAVPKKIL+LM+V LTRENVASHLQKYR
Sbjct: 172 EDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASHLQKYR 231
Query: 252 LYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA-- 309
LYLKRIS Q + + G P+ R G G F + ++ PA
Sbjct: 232 LYLKRISAQQPQNSAGFSFGGVDGPAEGR--------------GHGSF---SLQAVPAVQ 274
Query: 310 SGMLGRL----NAPAGLGM 324
G+LGR+ N PA +
Sbjct: 275 QGVLGRIGTTNNLPASTAL 293
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 283/499 (56%), Gaps = 61/499 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDD+PTCL LE LL RC+YHVT T ++ AL++LREN N FDLVISDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPD DGFKLLE +GLEMDLPVIMLS + D VMKGI HGACDYL+KPV ++EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 129 HVVRRK-KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HVV++ K AK S++ P + + + +S +++ D E D D
Sbjct: 131 HVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSG 190
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
T+KKPRVVWS ELH+KFV+AV QLG+DKAVPKKILDLM++E LTRENVASHL
Sbjct: 191 --------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHL 242
Query: 248 QKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRS 306
QKYRLYLK+I QQ NM A G+ D SY +M+ ++GL ++ + R
Sbjct: 243 QKYRLYLKKID--EGQQQNMTPDAFGTRDSSYFQMAQLDGLRDF-----------TAARQ 289
Query: 307 FPASGMLGR-----LNAP--AGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGS 359
P+SG+L R L P + + + G+ SS I H QNS N+ N G +H L P
Sbjct: 290 IPSSGLLSRSHLTKLQPPMYSSINLQGMNSSSFIQQGHHQNSSNSANPFGTYHSTLSPRI 349
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLL 419
+ N+ Q TS L+ LQ ++ + I + D + F D + FG S+ L
Sbjct: 350 QNVNLFQR--TSSPLEPLQFPRSKSYIGDFKGLGDRA---IGGSFLDTCMPFGSSSTSLP 404
Query: 420 DVNNNPLFLEG-HPQEAH--------------SNKMFGNQSLMSLNSGSSSRLPDHGRCN 464
+ NPL L+ + Q H SN N S L SR P H
Sbjct: 405 SASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGL-----SRFPGH---- 455
Query: 465 DNWSSAVQSSGIQPNSFSL 483
+W + ++ P+S L
Sbjct: 456 -SWQGNLNTTRFPPSSLPL 473
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/264 (59%), Positives = 193/264 (73%), Gaps = 10/264 (3%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G +FP G++VL VDDDPTCL++L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAEARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VM G+ HGACDYL+KPVR+
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKPVRM 120
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKD 175
EELKNIWQHV+R+K + KD +S + D +P N + N +G +RK
Sbjct: 121 EELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK 180
Query: 176 QNEDEDDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
+ + EDDE D + DP +T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMN
Sbjct: 181 R----EKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMN 236
Query: 235 VEKLTRENVASHLQKYRLYLKRIS 258
V LTRENVASHLQK+RLYLKRI+
Sbjct: 237 VPGLTRENVASHLQKFRLYLKRIA 260
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 193/264 (73%), Gaps = 10/264 (3%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G +FP G++VL VDDDPTCL++L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAKARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VM GI HGACDYL+KPVR+
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRM 120
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKD 175
EELKNIWQHV+R+K + KD +S + D +P N + N +G +RK
Sbjct: 121 EELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK 180
Query: 176 QNEDEDDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
+ + EDDE D + DP +T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMN
Sbjct: 181 R----EKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMN 236
Query: 235 VEKLTRENVASHLQKYRLYLKRIS 258
V LTRENVASHLQK+RLYLKRI+
Sbjct: 237 VPGLTRENVASHLQKFRLYLKRIA 260
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 227/539 (42%), Positives = 301/539 (55%), Gaps = 69/539 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDD+PTCL LE LL RC+YHVT T ++ AL+LLREN N FDLVISDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPD DGFKLLE +GLEMDLPVIMLS + D VMKGI HGACDYL+KPV ++EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE-- 186
HVV++ N + K S Q S+ +KKRK++ D DEDD
Sbjct: 131 HVVKK---------NIKSYAKNIGPSRQLLPPSESNLVPSASKKRKEKANDSGDEDDSDR 181
Query: 187 -------DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
+ + ++ T+KKPRVVWS ELH+KFV+AV QLG+DKAVPKKILDLM++E LT
Sbjct: 182 EEDDGEGSEQDGDEAGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLT 241
Query: 240 RENVASHLQKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMSSVNGLGNYHTVGGPGQ 298
RENVASHLQKYRLYLK+I QQ NM A G+ D SY +M+ ++GL ++
Sbjct: 242 RENVASHLQKYRLYLKKID--EGQQQNMTPDAFGTRDSSYFQMAQLDGLRDF-------- 291
Query: 299 FQNSTFRSFPASGMLGR-----LNAP--AGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF 351
+ R P+SG+L R L P + + + G+ SS I H NS N+ N G +
Sbjct: 292 ---TATRQIPSSGLLSRSHLTKLQPPMYSSINLQGMNSSSFIQQGHHHNSSNSANPFGTY 348
Query: 352 HPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGF 411
H L P + N+ Q TS L+ LQ ++ + I + D V F D+ + F
Sbjct: 349 HTTLSPRIQNVNLFQR--TSSPLETLQFPRSKSYIGDFKGIGDRA---VGGSFLDSCMPF 403
Query: 412 GRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMS---LNSGSS-------SRLPDHG 461
G S+ L + N L L+ + + GNQ + NS S SR P H
Sbjct: 404 GSSSTSLPSASTNTLMLQANYTQPLHISSDGNQPCIEGTPSNSASPNISFQGLSRFPSH- 462
Query: 462 RCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHP 520
+W + ++ P+S L+P L D ++ +G+ VS+ +P
Sbjct: 463 ----SWQGNLNTTRFPPSSLP---------LNPAFLPDQVTCAGNNLGDCTSLVSAGNP 508
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/312 (58%), Positives = 214/312 (68%), Gaps = 39/312 (12%)
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDGFKLLE VGLEMDLPVIMLS N DPKLVMKG+THGACDYL+KPVRIEEL+NIWQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMG---NSDQNGKLN-KKRKDQNEDEDDEDD 185
V+RRKK +K++N S +Q KP+ SG+ +G N DQNGK N +KRKD D+
Sbjct: 61 VIRRKKFVSKNENKSADQSKPNQASGEGQGGAIPDNGDQNGKTNVRKRKD-----DENVS 115
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
ED + +EDP TQKKPRVVWS+ELHRKFVAAVNQLGI+KAVPK+ILDLMNV LTRENVAS
Sbjct: 116 EDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENVAS 175
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFR 305
HLQKYRLYLKRIS VA QQANM AA G D ++RM +GL N+ F
Sbjct: 176 HLQKYRLYLKRISSVAAQQANMAAAFGVKDSPFIRMGPFSGL------------PNAAFP 223
Query: 306 SFPASGMLGRLNAPAGLGM-HGLPSSGMIPMRHAQNSDNTTNDQGKF-HPALLPGSHSGN 363
+ + GMLGR+N P + + + S IP N+ N GK +P L P
Sbjct: 224 HYSSGGMLGRINPPTNMNLIRDISPSAFIPT-------NSLNALGKMPNPNLFP------ 270
Query: 364 ILQGMPTSLELD 375
G+ SLELD
Sbjct: 271 ---GIQLSLELD 279
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 238/397 (59%), Gaps = 41/397 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 29 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 88
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 89 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 148
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED- 187
HVVR+++ S+ H+GS + G Q ED D++
Sbjct: 149 HVVRKRR--------SEWSVPEHSGSVEDTGERQQQQQRGGGGAAVSGGEDAADDNSSSV 200
Query: 188 ------------------------DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDK 223
+ ED + KKPRVVWSVELH++FVAAVNQLG++K
Sbjct: 201 NEGNNWRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEK 260
Query: 224 AVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMS 282
AVPKKIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S
Sbjct: 261 AVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 320
Query: 283 SVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSD 342
++NG + + GQ + A+G LGR PA + GLP S ++ R + D
Sbjct: 321 TLNGF-DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFD 375
Query: 343 N--TTNDQGKFHPALLPGSHSGNILQGMPTSLELDQL 377
N T G H + N+L G+PT +E QL
Sbjct: 376 NPKTRFGDGLGHHGQQQQTQQMNLLHGVPTGMEPRQL 412
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/390 (47%), Positives = 244/390 (62%), Gaps = 36/390 (9%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 29 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 88
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 89 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 148
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMGNS-----DQNGKLN------ 170
HVVR+++ + + + Q + H G G + D + +N
Sbjct: 149 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 208
Query: 171 ---KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
+KRKD+ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG + AVPK
Sbjct: 209 SSSRKRKDE-EGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGAE-AVPK 262
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNG 286
KIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 263 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 322
Query: 287 LGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN 346
+ + GQ + +G LGR PA + GLP S ++ R + DNT
Sbjct: 323 F-DLQALAVTGQLPAQSLAQLQVAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKT 377
Query: 347 DQGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 378 RFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 407
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/307 (54%), Positives = 208/307 (67%), Gaps = 25/307 (8%)
Query: 4 EHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
E GDQFP G++VL VDDD TCL +L+ +L +C+Y TT SQA AL +LREN+ FD+
Sbjct: 6 EAGGGDQFPVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDV 65
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + LVMKGI HGACDYL+KPVR+EEL
Sbjct: 66 IISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEEL 125
Query: 124 KNIWQHVVRRK-----------KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKK 172
KNIWQHVVR+K +D D+N N D + S ++ + K KK
Sbjct: 126 KNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSAN----DGAEDSWKSQKK 181
Query: 173 RKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDL 232
++D+ ED+ + + D N+ KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+L
Sbjct: 182 KRDKEEDDSELESGDPSNNS-----KKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILEL 236
Query: 233 MNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHT 292
MNV LTRENVASHLQK+RLYLKRI A A M G S +++S+ GL ++
Sbjct: 237 MNVPGLTRENVASHLQKFRLYLKRI---AQHHAGMGNPYGVP-ASSAQVASLGGL-DFQA 291
Query: 293 VGGPGQF 299
+ GQ
Sbjct: 292 LAASGQI 298
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/374 (48%), Positives = 242/374 (64%), Gaps = 18/374 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+QFP+GLRVL VDDDPTCL +LE +L C Y VT +++A +AL LLREN+N FD+VISDV
Sbjct: 27 NQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDV 86
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HV+R+KK + KD+ + D G Q + + D + N+ ++ E++++
Sbjct: 147 HVIRKKKHEWKDK-DFDQSATAEAGDRQQKPPEDVDYSSSANEGGNWKSSKRRKEEEDET 205
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+D ++ KKPRVVWSVELH++FV AVNQLGIDKAVPKKIL+LMNV LTRENVASHLQ
Sbjct: 206 EERDDSSSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQ 265
Query: 249 KYRLYLKRISCVANQQANMV--AALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRS 306
KYRLYL+R+S V+ Q N + + +G + + + GL ++ + Q + +
Sbjct: 266 KYRLYLRRLSGVS-QHPNGLNNSFMGHPESNIWNVFFSMGL-SFQALAATSQLPAQSLAT 323
Query: 307 FPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKF---HPALLPGSHSGN 363
A+ LGR A + M P+ +N + N + +F L + N
Sbjct: 324 LQAAA-LGRSATKAAISM---------PLVDQRNLFSFENPKLRFPEGQQQLNNSNKQIN 373
Query: 364 ILQGMPTSLELDQL 377
+L G+PT++E QL
Sbjct: 374 LLHGIPTTMEPKQL 387
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 164/296 (55%), Positives = 204/296 (68%), Gaps = 23/296 (7%)
Query: 4 EHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
E G +FP G++VL VDDDPTCL +L+ +L +C+Y TT SQ+ AL +LREN+ FD+
Sbjct: 5 EEAGGGEFPVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDV 64
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+EEL
Sbjct: 65 IISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEEL 124
Query: 124 KNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGN--SDQNGKLNKKRKDQ 176
KNIWQHVVR+K K+ +S + D +P N + N +D + K KK++D+
Sbjct: 125 KNIWQHVVRKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDGADDSWKSQKKKRDK 184
Query: 177 NEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
ED+ + + D N + KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMNV
Sbjct: 185 EEDDSELESGDPSN-----SSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVP 239
Query: 237 KLTRENVASHLQKYRLYLKRIS----------CVANQQANMVAALGSSDPSYLRMS 282
LTRENVASHLQK+RLYLKRI+ C A VA+LG D L S
Sbjct: 240 GLTRENVASHLQKFRLYLKRIAQHHAGITNPYCTPASSAQ-VASLGGLDFQALAAS 294
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/266 (60%), Positives = 204/266 (76%), Gaps = 14/266 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVL VDDDPTCL+LLE +L C Y VTT +A AL LLRE+ KFDLVISDV
Sbjct: 6 DEFPVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDV 65
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIM+SGNG+ VM+G+ HGACDYL+KPV I+EL+N+WQ
Sbjct: 66 DMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQ 125
Query: 129 HVVRRKKIDAK-------DQNNSDNQDKPHNGSGQAE----GMGNSDQNGKLNKKRKDQN 177
HVVR+K+ + K ++ + K G+ A+ +D N KL+K+RK +
Sbjct: 126 HVVRKKRQEVKAVSMKSIEEAGGCERQKRAGGADDADYTSSATDTTDGNWKLSKRRKGEF 185
Query: 178 EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEK 237
+ +E+++D+ ++DP+T KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LM V+
Sbjct: 186 K---EENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQG 242
Query: 238 LTRENVASHLQKYRLYLKRISCVANQ 263
LTRENVASHLQKYRLYLKR+S V NQ
Sbjct: 243 LTRENVASHLQKYRLYLKRLSGVTNQ 268
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 195/262 (74%), Gaps = 8/262 (3%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVL VDDD T L ++E + RC+Y VTT ++A AL LLRE K FD+V+SDVH
Sbjct: 7 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 66
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDG+KLLE VGLEMDLPVIM+SG+ VMKGI HGACDYL+KPVR EEL+NIWQH
Sbjct: 67 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 126
Query: 130 VVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
VVR+ D+K+Q+NS ++ D+ G+ AE +D K++ ++ED E +
Sbjct: 127 VVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVKAPKKRSSLKEEDIELES 186
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D DP KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASH
Sbjct: 187 D-----DPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASH 241
Query: 247 LQKYRLYLKRISCVANQQANMV 268
LQK+RLYLKR++ VA QQ M+
Sbjct: 242 LQKFRLYLKRLTGVAQQQNGML 263
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/256 (59%), Positives = 196/256 (76%), Gaps = 17/256 (6%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP+GLRVL VDDDPTCL +LE +L+ C Y VTT ++A ALK LR+ +N +D+VISDV
Sbjct: 25 DQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDV 84
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPV M+S + +VMKG+THGACDYL+KP+R+E LKNIWQ
Sbjct: 85 HMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQ 144
Query: 129 HVVRRKKIDAKDQN------NSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD 182
H+VR+++ + K+++ + D Q P + + S++N +KKRKD+ ++ D
Sbjct: 145 HLVRKRQHEWKEKDLDQHLGSVDEQKLPEDLD---YSLSVSEENWNTSKKRKDEEDEAVD 201
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+DD ++ KKPRVVWSVELH++FVAAVNQLGIDKAVPKKIL+LMNV L+REN
Sbjct: 202 KDDT--------SSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSREN 253
Query: 243 VASHLQKYRLYLKRIS 258
VASHLQKYRLYL+R+S
Sbjct: 254 VASHLQKYRLYLRRLS 269
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/276 (59%), Positives = 201/276 (72%), Gaps = 12/276 (4%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVL VDDD T L ++E + RC+Y VTT ++A AL LLRE K FD+V+SDVH
Sbjct: 9 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 68
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDG+KLLE VGLEMDLPVIM+SG+ VMKGI HGACDYL+KPVR EEL+NIWQH
Sbjct: 69 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 128
Query: 130 VVRRKKIDAKDQNNS---DNQDKPHNGSGQAE---GMGNSDQNGKLNKKRKDQNEDEDDE 183
VVR+ D K+ +NS ++ D+ G+ AE + ++ + K KKR E ED E
Sbjct: 129 VVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKE-EDIE 187
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+ D DP T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENV
Sbjct: 188 LESD-----DPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENV 242
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYL 279
ASHLQK+RLYLKR+S VA QQ M+ A+ + S L
Sbjct: 243 ASHLQKFRLYLKRLSGVAQQQNGMLNAIPGTIESKL 278
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 278/493 (56%), Gaps = 61/493 (12%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVLAVDD+PTCL LE LL RC+YHVT T ++ AL++LREN N FDLVISDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
GFKLLE +GLEMDLPVIMLS + D VMKGI HGACDYL+KPV ++EL+NIW HVV++
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 135 -KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHED 193
K AK S++ P + + + +S +++ D E D D
Sbjct: 120 IKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSG------ 173
Query: 194 PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 253
T+KKPRVVWS ELH+KFV+AV QLG+DKAVPKKILDLM++E LTRENVASHLQKYRLY
Sbjct: 174 --TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLY 231
Query: 254 LKRISCVANQQANMVA-ALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGM 312
LK+I QQ NM A G+ D SY +M+ ++GL ++ + R P+SG+
Sbjct: 232 LKKID--EGQQQNMTPDAFGTRDSSYFQMAQLDGLRDF-----------TAARQIPSSGL 278
Query: 313 LGR-----LNAP--AGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNIL 365
L R L P + + + G+ SS I H QNS N+ N G +H L P + N+
Sbjct: 279 LSRSHLTKLQPPMYSSINLQGMNSSSFIQQGHHQNSSNSANPFGTYHSTLSPRIQNVNLF 338
Query: 366 QGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNP 425
Q TS L+ LQ ++ + I + D + F D + FG S+ L + NP
Sbjct: 339 QR--TSSPLEPLQFPRSKSYIGDFKGLGDRA---IGGSFLDTCMPFGSSSTSLPSASTNP 393
Query: 426 LFLEG-HPQEAH--------------SNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSA 470
L L+ + Q H SN N S L SR P H +W
Sbjct: 394 LMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGL-----SRFPGH-----SWQGN 443
Query: 471 VQSSGIQPNSFSL 483
+ ++ P+S L
Sbjct: 444 LNTTRFPPSSLPL 456
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 215/499 (43%), Positives = 280/499 (56%), Gaps = 64/499 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDD+PTCL LE LL RC+YHVT T ++ AL++LREN N FDLVISDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPD DGFKLLE +GLEMDLPVI S D VMKGI HGACDYL+KPV ++EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVITHS---DYDSVMKGIIHGACDYLVKPVGLKELQNIWH 127
Query: 129 HVVRRK-KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HVV++ K AK S++ P + + + +S +++ D E D D
Sbjct: 128 HVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSG 187
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
T+KKPRVVWS ELH+KFV+AV QLG+DKAVPKKILDLM++E LTRENVASHL
Sbjct: 188 --------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHL 239
Query: 248 QKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRS 306
QKYRLYLK+I QQ NM A G+ D SY +M+ ++GL ++ + R
Sbjct: 240 QKYRLYLKKID--EGQQQNMTPDAFGTRDSSYFQMAQLDGLRDF-----------TAARQ 286
Query: 307 FPASGMLGR-----LNAP--AGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGS 359
P+SG+L R L P + + + G+ SS I H QNS N+ N G +H L P
Sbjct: 287 IPSSGLLSRSHLTKLQPPMYSSINLQGMNSSSFIQQGHHQNSSNSANPFGTYHSTLSPRI 346
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLL 419
+ N+ Q TS L+ LQ ++ + I + D + F D + FG S+ L
Sbjct: 347 QNVNLFQR--TSSPLEPLQFPRSKSYIGDFKGLGDRA---IGGSFLDTCMPFGSSSTSLP 401
Query: 420 DVNNNPLFLEG-HPQEAH--------------SNKMFGNQSLMSLNSGSSSRLPDHGRCN 464
+ NPL L+ + Q H SN N S L SR P H
Sbjct: 402 SASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGL-----SRFPGH---- 452
Query: 465 DNWSSAVQSSGIQPNSFSL 483
+W + ++ P+S L
Sbjct: 453 -SWQGNLNTTRFPPSSLPL 470
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/303 (54%), Positives = 209/303 (68%), Gaps = 15/303 (4%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
VE G +FP G++VL VDDDPTCL +L+ +L C+Y TT SQA AL +LREN+ FD
Sbjct: 4 VEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFD 63
Query: 63 LVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+EE
Sbjct: 64 VIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEE 123
Query: 123 LKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKDQN 177
LKNIWQHV+R+K + K+ +S + D +P N + N G ++K ++
Sbjct: 124 LKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRD 183
Query: 178 EDEDDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
+D+DD + E DP +T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMNV
Sbjct: 184 KDDDDGELESG----DPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVP 239
Query: 237 KLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGP 296
LTRENVASHLQK+RLYLKRI+ AN SS ++ S+ GL ++ +
Sbjct: 240 GLTRENVASHLQKFRLYLKRIAQHHAGIANPFCPPASSG----KVGSLGGL-DFQALAAS 294
Query: 297 GQF 299
GQ
Sbjct: 295 GQI 297
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/303 (54%), Positives = 209/303 (68%), Gaps = 15/303 (4%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
VE G +FP G++VL VDDDPTCL +L+ +L C+Y TT SQA AL +LREN+ FD
Sbjct: 4 VEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFD 63
Query: 63 LVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
++ISDVHMPDMDGF+LLELVGLEMDLPVIM+S + +VMKGI HGACDYL+KPVR+EE
Sbjct: 64 VIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEE 123
Query: 123 LKNIWQHVVRRKKIDAKDQNNSDNQD-----KPHNGSGQAEGMGNSDQNGKLNKKRKDQN 177
LKNIWQHV+R+K + K+ +S + D +P N + N G ++K ++
Sbjct: 124 LKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRD 183
Query: 178 EDEDDEDDEDDHNHEDP-TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
+D+DD + E DP +T KKPRVVWSVELH++FV AVN LGIDKAVPKKIL+LMNV
Sbjct: 184 KDDDDGELESG----DPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVP 239
Query: 237 KLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGP 296
LTRENVASHLQK+RLYLKRI+ AN SS ++ S+ GL ++ +
Sbjct: 240 GLTRENVASHLQKFRLYLKRIAQHHAGIANPFCPPASSG----KVGSLGGL-DFQALAAS 294
Query: 297 GQF 299
GQ
Sbjct: 295 GQI 297
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/251 (60%), Positives = 192/251 (76%), Gaps = 13/251 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVL VDD+PTCL++LE +L RC Y VTT +A AL +LRE+ KFD+VISDV
Sbjct: 48 DEFPVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDV 107
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIM+SGNG+ VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 108 DMPDMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQ 167
Query: 129 HVVRRKK-----IDAKDQNNSDNQDKPHNGSGQ------AEGMGNSDQNGKLNKKRKDQN 177
HVVR+K+ + K + ++P G G + +D N KL K+RK
Sbjct: 168 HVVRKKRREVKAVATKSVEEAGGCERPKRGGGADDADYTSSATDTTDSNWKLTKRRK--G 225
Query: 178 EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEK 237
E +D+ +++++ ++DP+T K+PRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LM V+
Sbjct: 226 EFKDENEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQG 285
Query: 238 LTRENVASHLQ 248
LTRENVASHLQ
Sbjct: 286 LTRENVASHLQ 296
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 190/255 (74%), Gaps = 13/255 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDD+P L++LE +L C Y VTT +A AL LLRE+ +KFDLVISDV
Sbjct: 44 DAFPAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDV 103
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLELVGLEMDLPVIM+SGNG+ VMKGITHGACDYLLKPVR +EL+NIWQ
Sbjct: 104 NMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQ 163
Query: 129 HVVRRKKIDAKDQNNSDNQDK-----------PHNGSGQAEGMGNSDQNGKLNKKRKDQN 177
HVVR+++ D K + + ++ P + + G++ +G KKRK +N
Sbjct: 164 HVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTG-DGNWRKKRKGEN 222
Query: 178 EDEDDEDDED-DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
+ DE +ED + ++DP+T KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LM V
Sbjct: 223 QTFKDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILELMGVH 282
Query: 237 KLTRENVASHLQKYR 251
LTRENVASHLQ R
Sbjct: 283 GLTRENVASHLQVIR 297
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 213/336 (63%), Gaps = 34/336 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVLAVDD P CL+LLE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
M DMDGFKLLEL+GLEMDLPVIM S NG+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V R++K+D ++ N +N G+ G + KRK + +D D+ ++
Sbjct: 131 VWRKRKLDIRNHNGG------YNDGGELVGATRT--------KRKYTRKMRNDGDNYGEN 176
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+T K+ RVVW+ ELHR FV AV++LG+D+AVP+KIL +M V+ +TREN+ASHLQK
Sbjct: 177 KENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKRIS + + M+ ++ L NY +N +R PA
Sbjct: 237 YRLYLKRISTQTGMDPDQFPE------KWKYMNELDALKNY--------CENGRYRLTPA 282
Query: 310 ------SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
S R+N+ + L +G + + ++++Q
Sbjct: 283 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQ 318
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/264 (58%), Positives = 187/264 (70%), Gaps = 11/264 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL VDDDPT L +LE +LR+C Y VTT A A+++LRE +NKFD+VISDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLEL+GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDEDDEDDE 186
R+K + K+ +D+ D EG D + +KRKD N+D D+D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQDSS 188
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASH
Sbjct: 189 DG------ATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH 242
Query: 247 LQKYRLYLKRISCVANQQANMVAA 270
LQKYRLYL R+ N++ M AA
Sbjct: 243 LQKYRLYLSRLQ-KQNEERIMGAA 265
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/264 (58%), Positives = 187/264 (70%), Gaps = 11/264 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL VDDDPT L +LE +LR+C Y VTT A A+++LRE +NKFD+VISDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLEL+GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDEDDEDDE 186
R+K + K+ +D+ D EG D + +KRKD N+D D+D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQDSS 188
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASH
Sbjct: 189 DG------ATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH 242
Query: 247 LQKYRLYLKRISCVANQQANMVAA 270
LQKYRLYL R+ N++ M AA
Sbjct: 243 LQKYRLYLSRLQ-KQNEERIMGAA 265
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 213/336 (63%), Gaps = 34/336 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVLAVDD P CL+LLE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 26 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 85
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
M DMDGFKLLEL+GLEMDLPVIM S NG+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 86 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 145
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V R++K+D ++ N +N G+ G + KRK + +D D+ ++
Sbjct: 146 VWRKRKLDIRNHNGG------YNDGGELVGATRT--------KRKYTRKMRNDGDNYGEN 191
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+T K+ RVVW+ ELHR FV AV++LG+D+AVP+KIL +M V+ +TREN+ASHLQK
Sbjct: 192 KENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 251
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKRIS + + M+ ++ L NY +N +R PA
Sbjct: 252 YRLYLKRISTQTGMDPDQFPE------KWKYMNELDALKNY--------CENGRYRLTPA 297
Query: 310 ------SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
S R+N+ + L +G + + ++++Q
Sbjct: 298 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQ 333
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 213/336 (63%), Gaps = 34/336 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVLAVDD P CL+LLE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
M DMDGFKLLEL+GLEMDLPVIM S NG+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V R++K+D ++ N +N G+ G + KRK + +D D+ ++
Sbjct: 131 VWRKRKLDIRNHNGG------YNDGGELVGATRT--------KRKYTRKMRNDGDNYGEN 176
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+T K+ RVVW+ ELHR FV AV++LG+D+AVP+KIL +M V+ +TREN+ASHLQK
Sbjct: 177 KENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKRIS + + M+ ++ L NY +N +R PA
Sbjct: 237 YRLYLKRISTQTGMDPDQFPE------KWKYMNELDALKNY--------CENGRYRLTPA 282
Query: 310 ------SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
S R+N+ + L +G + + ++++Q
Sbjct: 283 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQ 318
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 213/336 (63%), Gaps = 34/336 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVLAVDD P CL+LLE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
M DMDGFKLLEL+GLEMDLPVIM S NG+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V R++K+D ++ N +N G+ G + KRK + +D D+ ++
Sbjct: 131 VWRKRKLDIRNHNGG------YNDGGELVGATRT--------KRKYTRKMRNDGDNYGEN 176
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+T K+ RVVW+ ELHR FV AV++LG+D+AVP+KIL +M V+ +TREN+ASHLQK
Sbjct: 177 KENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKRIS + + M+ ++ L NY +N +R PA
Sbjct: 237 YRLYLKRISTQTGMDPDQFPE------KWKYMNELDALKNY--------CENGRYRLTPA 282
Query: 310 ------SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
S R+N+ + L +G + + ++++Q
Sbjct: 283 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQ 318
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 213/336 (63%), Gaps = 34/336 (10%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
+FP GLRVLAVDD P CL+LLE LLRRC+Y T T A TAL++LRE FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
M DMDGFKLLEL+GLEMDLPVIM S NG+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V R++K+D ++ N +N G+ G + KRK + +D D+ ++
Sbjct: 131 VWRKRKLDIRNHNGG------YNDGGELVGATRT--------KRKYTRKMRNDGDNYGEN 176
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+T K+ RVVW+ ELHR FV AV++LG+D+AVP+KIL +M V+ +TREN+ASHLQK
Sbjct: 177 KENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 250 YRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 309
YRLYLKRIS + + ++ ++ L NY +N +R PA
Sbjct: 237 YRLYLKRISTQTGMDPDQFPE------KWKYINELDALKNY--------CENGRYRLTPA 282
Query: 310 ------SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
S R+N+ + L +G + + ++++Q
Sbjct: 283 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQ 318
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/261 (58%), Positives = 184/261 (70%), Gaps = 5/261 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL++LRE +NKFD+VISDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNM 68
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLEL+GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED-DEDDH 189
R+K + K+ +D+ D EG D+ G + D D D D D
Sbjct: 129 YRKKMHEVKEIEGNDSCDDLQIFRNGVEGF---DERGLFMRADSDTMRKRKDMDKDHADQ 185
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+ D T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLM+V LTRENVASHLQK
Sbjct: 186 DSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGLTRENVASHLQK 245
Query: 250 YRLYLKRISCVANQQANMVAA 270
YRLYL R+ N++ M AA
Sbjct: 246 YRLYLSRLQ-KQNEERIMGAA 265
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 209/312 (66%), Gaps = 20/312 (6%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGN--SDQNGKLNKKRKDQNEDEDDEDDEDD 188
R+K +AK+ + ++ NGS ++ GN + ++ +KKRKD + DD++
Sbjct: 133 FRKKIHEAKEFESFESIHLMRNGSELSDD-GNLFAVEDVTSSKKRKDADSKHDDKE---- 187
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
DP++ KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 188 --CLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 245
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDP-----------SYLRMSSVNGLGNYHTVGGPG 297
KYRLYL RI +Q+++ S P S ++ + + NY+ G
Sbjct: 246 KYRLYLSRIQKENDQRSSSSGMKHSDFPSKDMGSFGFQNSVIKQQNDVAIDNYNHSDGSL 305
Query: 298 QFQNSTFRSFPA 309
Q QN +S A
Sbjct: 306 QLQNVETKSHEA 317
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/279 (55%), Positives = 187/279 (67%), Gaps = 32/279 (11%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL VDDDP CL ++E +L+RCQY VTT S+ ALK LRE K+ FD+V+SDVHM
Sbjct: 10 FPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHM 69
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE + LE+D+PV+M+S N +V++GI HGA DYLLKPVRIEEL+NIWQHV
Sbjct: 70 PDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 129
Query: 131 VRRKKIDAKDQNNSDNQDKPHNG----------SGQAEGMGNSDQNGKLNKK-------- 172
VRRK+ Q N + + NG G + G+S+Q+G K
Sbjct: 130 VRRKR--ESSQGNLRSGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDKTGSAGGSG 187
Query: 173 -----------RKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGI 221
+ D+ DE + D N ED + KKPRVVWS ELH++FV AVNQLGI
Sbjct: 188 GSSKRKKGSGKKGDEGTDEVKDGSGGDEN-EDSSALKKPRVVWSAELHQQFVTAVNQLGI 246
Query: 222 DKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
DKAVPK+ILDLM V+ LTRENVASHLQKYRLYLKR+ V
Sbjct: 247 DKAVPKRILDLMGVQGLTRENVASHLQKYRLYLKRLQGV 285
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 184/252 (73%), Gaps = 9/252 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L++C Y VT A AL LLRE K+ +D+VISDV
Sbjct: 11 DVFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLELVGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
HV R+K + +D + ++ D NG Q++ + KKRKD E+
Sbjct: 131 HVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVSGDPTSVKKRKDT------ENK 184
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
DD +H DP++ KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVAS
Sbjct: 185 HDDRDHCDPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 244
Query: 246 HLQKYRLYLKRI 257
HLQKYRLYL R+
Sbjct: 245 HLQKYRLYLSRL 256
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 184/251 (73%), Gaps = 2/251 (0%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFPSGLRVL VDDD +CL +LE +L R Y VT SQA AL +LRE K FDLV+SDV
Sbjct: 5 DQFPSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLSDV 64
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMP M+G+KLL+ VGLEMDLPVIM+S +G VMKGI HGACDYL+KP+R EELKNIWQ
Sbjct: 65 HMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNIWQ 124
Query: 129 HVVRRKKIDAKD-QNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HVVRRK K+ Q NS + N S E + + + + +K RK++ D ED+E+
Sbjct: 125 HVVRRKWTMNKELQRNSQALEDNKNSSSSLETVFSVSECSEESKLRKNKRR-VDREDNEE 183
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + KK RVVWS+ELH++F +AVN LGI+KAVPK+IL+LMNV L+RENVASHL
Sbjct: 184 DDLLDPGNNSKKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSRENVASHL 243
Query: 248 QKYRLYLKRIS 258
QKYRLYL+R+S
Sbjct: 244 QKYRLYLRRLS 254
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 189/273 (69%), Gaps = 15/273 (5%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
++ FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL +LRE KNKFD+VI
Sbjct: 1 MDATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVI 60
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDV+MPDMDGFKLLE +GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+N
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 120
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDED 181
IWQHV R+K + K+ +D+ D EG+ + +KRKD ++D
Sbjct: 121 IWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHA 180
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
D++ D + T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 181 DQESSDGN------TVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRE 234
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSS 274
NVASHLQKYRLYL R+ Q+ N LG++
Sbjct: 235 NVASHLQKYRLYLSRL-----QKQNEERILGAA 262
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 189/273 (69%), Gaps = 15/273 (5%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
++ FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL +LRE KNKFD+VI
Sbjct: 1 MDATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVI 60
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDV+MPDMDGFKLLE +GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+N
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 120
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDED 181
IWQHV R+K + K+ +D+ D EG+ + +KRKD ++D
Sbjct: 121 IWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHA 180
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
D++ D + T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 181 DQESSDGN------TVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRE 234
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSS 274
NVASHLQKYRLYL R+ Q+ N LG++
Sbjct: 235 NVASHLQKYRLYLSRL-----QKQNEERILGAA 262
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 211/304 (69%), Gaps = 34/304 (11%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M+ + +G+ FP G+RVL VDDDP CLLLL+ +L +C+YHVT S+A+ AL+LLRE K +
Sbjct: 1 MSDDTTDGEGFPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQ 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FDLVISDV+MPDMDGFKLLEL+GLEMDLPVIM+SGNG+ +VM+GITHGACDYLLKPVRI
Sbjct: 61 FDLVISDVYMPDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRI 120
Query: 121 EELKNIWQHVVRRK--KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNE 178
EEL+NIWQHVVR++ K AK++++ + D +KKRKD++
Sbjct: 121 EELRNIWQHVVRKRGAKEAAKEESSGEWDDSSEKFPEYT------------SKKRKDKDA 168
Query: 179 DEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL 238
D DD ED + KK RVVWS +LHR FV AVNQLG++KAVPK+IL++M+V+ L
Sbjct: 169 DSSGGDDP----IEDMSGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGL 224
Query: 239 TRENVASHLQKYRLYLKRISCV-------ANQQAN---------MVAALGSSDPSYLRMS 282
TRENVASHLQKYRL LKR+S V A+ QA+ V GSS S R +
Sbjct: 225 TRENVASHLQKYRLGLKRLSGVDMEPHPIASFQADESGSFGGSMFVRPAGSSKSSIARTT 284
Query: 283 SVNG 286
S G
Sbjct: 285 SCAG 288
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 186/253 (73%), Gaps = 3/253 (1%)
Query: 9 DQF-PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
D F P+GL+VL VDDDP CL LLE +LR C+Y VTT S+A AL +LRE K FD+VISD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
VHMPDMDGFKLLEL+GLEM +PVIM+S +G+ VMKG+ +GACDYL+KPVRIEEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 128 QHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
QHVVRR+ D+ ++ + + + S + +D + +L +K+K + D
Sbjct: 122 QHVVRRRTKDSAVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRPSCDFG--GGGG 179
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + + KK RVVWS +LH++FV A+N +GI+KAVPK+IL++MN++ LTRENVASHL
Sbjct: 180 DESMRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVASHL 239
Query: 248 QKYRLYLKRISCV 260
QKYRLYLKR+S V
Sbjct: 240 QKYRLYLKRLSGV 252
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 186/253 (73%), Gaps = 3/253 (1%)
Query: 9 DQF-PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
D F P+GL+VL VDDDP CL LLE +LR C+Y VTT S+A AL +LRE K FD+VISD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
VHMPDMDGFKLLEL+GLEM +PVIM+S +G+ VMKG+ +GACDYL+KPVRIEEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 128 QHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
QHVVRR+ D+ ++ + + + S + +D + +L +K+K + D
Sbjct: 122 QHVVRRRTKDSAVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRPSCDFG--GGGG 179
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + + KK RVVWS +LH++FV A+N +GI+KAVPK+IL++MN++ LTRENVASHL
Sbjct: 180 DESVRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVASHL 239
Query: 248 QKYRLYLKRISCV 260
QKYRLYLKR+S V
Sbjct: 240 QKYRLYLKRLSGV 252
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 222/352 (63%), Gaps = 28/352 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFPSGLR+L VDDD +CL +LE +L R Y VT SQA AL +LRE K+ FDLV+SDV
Sbjct: 5 DQFPSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 69 HMPDMDGFKLLELVGL-EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
HMP M+G+KLL+ VGL E+DLPVIM+S +G VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 128 QHVVRRKKIDAKDQNNSDN-QDKPHNGSGQAEGMGNSDQNGKL--NKKRKDQNEDEDDED 184
QHVVRRK + K+ NS +D ++GS + + G L +K+K + D ED
Sbjct: 125 QHVVRRKCVKKKELRNSQALEDNKNSGSLETVFSVSECSEGSLMKRRKKKKKKRSVDRED 184
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
+E+D + DP KK RVVWS+ELH++FV AVN+L IDKAVPK+IL+LMNV L+RENVA
Sbjct: 185 NENDLDLLDPGNSKKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNVPGLSRENVA 244
Query: 245 SHLQKYRLYLKRISCVANQQANM--------VAALGSS---DPSYLRMSSVNGLGNYHT- 292
SHLQK+R+YLKR+S A+Q + + AL SS P L + N+H+
Sbjct: 245 SHLQKFRMYLKRLSGEASQNNDTESIKRYENIQALVSSGQLHPQTLAALYGQPIDNHHSA 304
Query: 293 ---VGGP-----GQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMR 336
V P G+ QN F +S N P + +HGL SS R
Sbjct: 305 SFGVWIPNDDHLGRSQNEHFSVDVSSAS----NRPVSVAVHGLSSSANFRQR 352
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/304 (54%), Positives = 212/304 (69%), Gaps = 34/304 (11%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M+ + +G+ FP G+RVL VDDDP CLLLL+ +L +C+YHVT S+A+ AL+LLRE K +
Sbjct: 1 MSDDTTDGEGFPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQ 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FDLVISDV+MPDMDGFKLLEL+GLEMDLPVIM+SGNG+ +VM+GITHGACDYLLKPVRI
Sbjct: 61 FDLVISDVYMPDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRI 120
Query: 121 EELKNIWQHVVRRK--KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNE 178
EEL+NIWQHVVR++ + AK++++ + D +KKRK+++
Sbjct: 121 EELRNIWQHVVRKRGAREAAKEESSGEWDDSSEKFPEYT------------SKKRKEKDA 168
Query: 179 DEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL 238
D D++ ED + KK RVVWS +LHR FV AVNQLG++KAVPK+IL++MNV+ L
Sbjct: 169 DSSGGDEQ----IEDISGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGL 224
Query: 239 TRENVASHLQKYRLYLKRISCV-------ANQQAN---------MVAALGSSDPSYLRMS 282
TRENVASHLQKYRL LKR+S V A+ QA+ V GSS S R +
Sbjct: 225 TRENVASHLQKYRLGLKRLSGVDMEPHPIASFQADESGSFGGSMFVRPAGSSKSSIARTT 284
Query: 283 SVNG 286
S G
Sbjct: 285 SCAG 288
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 179/209 (85%), Gaps = 5/209 (2%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDDDP CL +LE LLR+CQYHVTTT+QA+ AL +LREN+NKFDLVISDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPD+DGFKLLELVGLEMDLPVIMLS +GD KLVMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 129 HVVRRKKIDAKDQNNSDNQDK-PHNGSGQAEGM---GNSDQNGKLNKKRKDQNEDEDDED 184
HVVRRK D++DQN + N++K P+ G ++G+ ++DQN +L KKRKDQ++ E++E
Sbjct: 133 HVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSD-EEEEG 191
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFV 213
E++ + EDP+ QKK RVVWSVELHRKFV
Sbjct: 192 GEENEDDEDPSAQKKARVVWSVELHRKFV 220
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 187/271 (69%), Gaps = 21/271 (7%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL++LRE K+KFD+VISDV+M
Sbjct: 8 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDVNM 67
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE +GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+NIWQHV
Sbjct: 68 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 127
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKL-------NKKRKDQNEDEDDE 183
R++ + K+ D+ D EG D+ G +KRKD ++D D+
Sbjct: 128 YRKRMHEVKEIEGHDSCDDLQILRYGFEGF---DEKGIFITADSDTTRKRKDLDKDHADQ 184
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D D T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV +TRENV
Sbjct: 185 DSSDG------ATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGITRENV 238
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSS 274
ASHLQKYRLYL R+ Q+ N LG++
Sbjct: 239 ASHLQKYRLYLGRL-----QKQNEERILGAA 264
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 196/270 (72%), Gaps = 13/270 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 131 VRRKKIDAKDQNNSDNQDKPH---NGSGQAEGMGN--SDQNGKLNKKRKDQNEDEDDEDD 185
+R++ +AK+ + ++ + H NGS ++ GN + ++ KKRKD + DD++
Sbjct: 133 LRKRIHEAKEFESFESFESIHLMRNGSELSDD-GNLFAVEDVTSTKKRKDADNKHDDKE- 190
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
DP++ KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVAS
Sbjct: 191 -----CLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 245
Query: 246 HLQKYRLYLKRISCVANQQANMVAALGSSD 275
HLQKYRLYL RI N Q + + L SD
Sbjct: 246 HLQKYRLYLSRIQ-KENDQRSSSSGLKHSD 274
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 192/276 (69%), Gaps = 14/276 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L++C Y VTT A ALK LRE K+ +D+VISDV
Sbjct: 12 DAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 72 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDKP-----HNGSGQAEGMGNSDQNGKLN--KKRKDQNEDED 181
HV R++ +A+D + + D NGS ++ GN ++ KKRKD + D
Sbjct: 132 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDD-GNLFAVEEITSIKKRKDADNKHD 190
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
D++ D + KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 191 DKE------FGDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 244
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPS 277
NVASHLQKYRLYL R+ +Q+++ S PS
Sbjct: 245 NVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPS 280
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 182/253 (71%), Gaps = 10/253 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L+RC Y VTT A AL LLRE K +D+VISDV
Sbjct: 4 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 63
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 64 YMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 123
Query: 129 HVVRRKKIDAKD---QNNSDNQDKPHNGSGQAE-GMGNSDQNGKLNKKRKDQNEDEDDED 184
HV R+K + +D ++ NGS E G ++ L KKRKD D++D
Sbjct: 124 HVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLCGEDLTLIKKRKDIESKHDEKD 183
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D+ T+ KK RVVWSVELH+KFV AVNQ+G DK PKKILDLMNV +LTRENVA
Sbjct: 184 IGDN------TSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRENVA 237
Query: 245 SHLQKYRLYLKRI 257
SHLQKYRLYL R+
Sbjct: 238 SHLQKYRLYLSRL 250
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 187/257 (72%), Gaps = 6/257 (2%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK--NKFDL 63
++ D FP+GLRVLAVDDD CL +LE L+ C Y+ T + A TAL +LRE K N+FDL
Sbjct: 1 MDADTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDL 60
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
VISDV MP+MDGFKLLEL+GLEMDLPVIMLS N + + +MKGI HGACDY++KPVR+E+L
Sbjct: 61 VISDVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQL 120
Query: 124 KNIWQHVVRRKKIDAKDQNNSDNQD---KPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
+ IW HVV+ K D ++ +S N D K +G G + D+N N+++K +++
Sbjct: 121 RGIWTHVVKNGKTDPRNTISSGNDDDVQKLPSGDELPSGDADKDENIAANRRKKYSKKNK 180
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
+ D+ N E+ + QKK RV W +LHRKFV AV+Q+GID AVPKKIL +MNVE LTR
Sbjct: 181 RIVEVADEDN-ENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVEGLTR 239
Query: 241 ENVASHLQKYRLYLKRI 257
ENVASHLQKYR+YLK++
Sbjct: 240 ENVASHLQKYRIYLKKL 256
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 183/251 (72%), Gaps = 5/251 (1%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL +LRE K+ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++ELKNIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ--NGKLNKKRKDQNEDEDDEDDE 186
HV R+K + KD + + + +++ + Q G+L RK ++ + DD+
Sbjct: 131 HVFRKKIHEGKDVESYECMREIQMIMSRSDEFDDGHQLNGGELGATRKRKDMENRRHDDQ 190
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
+ DP++ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASH
Sbjct: 191 E---LVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
Query: 247 LQKYRLYLKRI 257
LQKYRLYL R+
Sbjct: 248 LQKYRLYLSRL 258
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 193/269 (71%), Gaps = 11/269 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 131 VRRKKIDAKDQNNSDNQDKPH---NGSGQA-EGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
R++ + ++ N ++ + H NGS + EG + ++ KKRKD + DD++
Sbjct: 133 FRKRIHEVREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKE-- 190
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D ++ KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV L+RENVASH
Sbjct: 191 ----FLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH 246
Query: 247 LQKYRLYLKRISCVANQQANMVAALGSSD 275
LQKYRLYL R+ N+Q + + + SD
Sbjct: 247 LQKYRLYLSRLQ-KDNEQKSSSSGMKHSD 274
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 188/277 (67%), Gaps = 19/277 (6%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
++ FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL +LRE KNKFD+VI
Sbjct: 1 MDATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVI 60
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
SDV+MPDMDGFKLLE +GLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++EL+N
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 120
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDED 181
IWQHV R+K + K+ +D+ D EG+ + +KRKD ++D
Sbjct: 121 IWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHA 180
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAV----PKKILDLMNVEK 237
D++ D + T KK RVVWSV+LH+KFV AVNQ+G D PKKILDLMNV
Sbjct: 181 DQESSDGN------TVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVPG 234
Query: 238 LTRENVASHLQKYRLYLKRISCVANQQANMVAALGSS 274
LTRENVASHLQKYRLYL R+ Q+ N LG++
Sbjct: 235 LTRENVASHLQKYRLYLSRL-----QKQNEERILGAA 266
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/286 (53%), Positives = 191/286 (66%), Gaps = 16/286 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV
Sbjct: 11 DVFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD----QNGKLNKKRKDQNEDEDDED 184
HV+R+K + +D D + H A+ +S + +KRKD D
Sbjct: 131 HVLRKKIQEGRDIEGHDVIEGIHILRNVADRYDDSQFLRGEEPFSVRKRKDI-------D 183
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
+D + D ++ KK RVVWSVELH+KFV AVNQ+G DK PKKILDLMNV LTRENVA
Sbjct: 184 KHEDKDFCDTSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 243
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNY 290
SHLQKYRLYL R+ + +A V + D S +G GN+
Sbjct: 244 SHLQKYRLYLSRLQKENDPKACFVVGMKPKD-----SCSKDGDGNF 284
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 193/269 (71%), Gaps = 11/269 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLL VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 PDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 131 VRRKKIDAKDQNNSDNQDKPH---NGSGQA-EGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
R++ +A++ N ++ + H NGS + EG + ++ KKRKD + DD++
Sbjct: 133 FRKRIHEAREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKE-- 190
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D ++ KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV L+RENVASH
Sbjct: 191 ----FLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH 246
Query: 247 LQKYRLYLKRISCVANQQANMVAALGSSD 275
LQKYRLYL R+ N+Q + + + SD
Sbjct: 247 LQKYRLYLSRLQ-KDNEQKSSSSGMKHSD 274
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/313 (51%), Positives = 203/313 (64%), Gaps = 23/313 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K+ +D+VISDV
Sbjct: 11 DAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQA-EGMGNSDQNGKLNKKRKDQNEDEDDED 184
HV R+K + +D + + GS + +G ++ KKRKD DD+D
Sbjct: 131 HVFRKKIHEVRDIEILEGMESIQMARIGSDHSDDGYLFCGEDLTSVKKRKDIENKHDDKD 190
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
E +T KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRENVA
Sbjct: 191 GES-------STTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILDLMNVPWLTRENVA 243
Query: 245 SHLQKYRLYLKRISCVANQQANM------VAALGSSDPSYLRMSSVN------GLGNYHT 292
SHLQKYRLYL R+ + + ++ ++LG S S+ +S+N GNY
Sbjct: 244 SHLQKYRLYLSRLQKENDSKTSIGGIKQSESSLGESAGSFGTQNSINMQQKDVSNGNYGF 303
Query: 293 VGGPGQFQNSTFR 305
G QN+ R
Sbjct: 304 SGNSLFVQNTEPR 316
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/255 (57%), Positives = 181/255 (70%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+GL+VL VDD+P L+++E +L+ CQY VTT + A AL +LREN+N FDLVISDV+MP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE +GLE+DLPVIM+SG+G+ VMKGI HGACDYLLKPVR++EL NIWQHVV
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN---KKRKDQNEDEDDEDDEDD 188
R+ +D P SG+ + N + +KRK+++ED
Sbjct: 121 RKL---------VTPRDIPKEESGEWDEFPKHQDNADFDSTARKRKERSEDV-------A 164
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
ED KK RVVWS ELH++FV AVN LG+DKAVP+KILD+MNV+ LTRENVASHLQ
Sbjct: 165 QLVEDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQ 224
Query: 249 KYRLYLKRISCVANQ 263
KYRLYLKR+ V Q
Sbjct: 225 KYRLYLKRLIGVTPQ 239
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/249 (58%), Positives = 173/249 (69%), Gaps = 31/249 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL +LRE K+ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKPVR++ELKNIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HV R+K + KD +G + +KRKD DD
Sbjct: 131 HVFRKKIHEGKD-------------------LGAT-------RKRKDMENRR-----HDD 159
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
DP++ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 160 QELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 219
Query: 249 KYRLYLKRI 257
KYRLYL R+
Sbjct: 220 KYRLYLSRL 228
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 189/289 (65%), Gaps = 29/289 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L+RC Y VTT A AL LLRE K +D+VISDV
Sbjct: 11 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 FMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 129 HVVRRKKIDAKD---QNNSDNQDKPHNGSGQAE-GMGNSDQNGKLNKKRKDQNEDEDDED 184
HV R+K + +D ++ NGS Q E G ++ L KKRKD D++D
Sbjct: 131 HVFRKKIHEVRDIEILEGIESFQMTRNGSDQYEDGHFLCGEDLTLIKKRKDIESKHDEKD 190
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID------------------KAVP 226
+ D+ T+ KK RVVWSVELH+KFV AVNQ+G D + P
Sbjct: 191 NGDN------TSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCLAEVGP 244
Query: 227 KKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSD 275
KKILDLMNV +LTRENVASHLQKYRLYL R+ N N V + SD
Sbjct: 245 KKILDLMNVPRLTRENVASHLQKYRLYLSRLQ-KGNDFNNPVGMIKQSD 292
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 182/258 (70%), Gaps = 13/258 (5%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GL VL VDDD CL ++E +L+ C+Y VT S A TAL++LR K +FD+V+SDVHM
Sbjct: 1 FPAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHM 60
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGFKLLE++ E+ LPV+M+S N D +V++GI HGA DYLLKPVRIEEL+NIWQHV
Sbjct: 61 PDMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE------- 183
VRR AK + D + + S +A+ G++ ++ ++++ + + + +
Sbjct: 121 VRRDYSSAKSSGSEDVE--ASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKKG 178
Query: 184 ----DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
+ + + D + KKPRVVWS ELH +FV AVNQLGIDKAVPK+ILDLM V+ LT
Sbjct: 179 GKSVKEAEKKDVVDNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQGLT 238
Query: 240 RENVASHLQKYRLYLKRI 257
RENVASHLQKYRLYLKR+
Sbjct: 239 RENVASHLQKYRLYLKRL 256
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 175/365 (47%), Positives = 228/365 (62%), Gaps = 30/365 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFPSGLR+L VDDD +CL +LE +L R Y VT SQA AL +LRE K+ FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 69 HMPDMDGFKLLELVGL-EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
HMP M+G+ LL+ VGL EMDLPVIM+S +G VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 128 QHVVRRKKIDAKDQNNSDN-QDKPHNGSGQAEGMGNSDQNGK-LNKKRKDQNEDEDD--E 183
QHVVRRK + K+ +S +D ++GS + + S+ + + L K R + + +
Sbjct: 125 QHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDR 184
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
DD +D DP KK RVVWS+ELH++FV AVN+LGIDKAVPK+IL+LMNV L+RENV
Sbjct: 185 DDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENV 244
Query: 244 ASHLQKYRLYLKRISCVANQQ---------ANMVAALGSSDPSYLRMSSVNG--LGNYHT 292
ASHLQK+RLYLKR+S A+Q N+ A + S ++++ G + N+H+
Sbjct: 245 ASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPIDNHHS 304
Query: 293 ----VGGP----GQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNT 344
V P G+ QN F +S N P + +HGL SS R N +N
Sbjct: 305 ASFGVWIPNDNLGRSQNEHFSVDVSSAS----NRPVSVAVHGLSSSA--NFRQRGNVNNN 358
Query: 345 TNDQG 349
QG
Sbjct: 359 RIRQG 363
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/255 (54%), Positives = 183/255 (71%), Gaps = 8/255 (3%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK--NKFDL 63
++ D FP GLRVLAVDDD CL +LE L+ C Y+ T + A TAL +LRE K N+FDL
Sbjct: 1 MDADTFPVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDL 60
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
VISDV M MDGFKLLEL+GLEMDLPVIMLS N + + +MKGI HGACDY++KPVR+E+L
Sbjct: 61 VISDVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQL 120
Query: 124 KNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE 183
+ IW HVV+ KID ++ SD+ D Q G+ D+ K+ + R+ + ++ +
Sbjct: 121 RGIWTHVVKNSKIDPRNNIGSDSDDVV-----QKLPSGDGDKGEKVGETRQKKYPKKNKK 175
Query: 184 D-DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
D D ++E + QKK RV W ELH+KFV AV Q+GID+AVPKKIL++M+VE LTREN
Sbjct: 176 TVDVADEDNEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMDVEGLTREN 235
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYR+YL+++
Sbjct: 236 VASHLQKYRIYLRKL 250
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 222/347 (63%), Gaps = 28/347 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFPSGLR+L VDDD +CL +LE +L R Y VT SQA AL +LRE K+ FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 69 HMPDMDGFKLLELVGL-EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
HMP M+G+ LL+ VGL EMDLPVIM+S +G VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 128 QHVVRRKKIDAKDQNNSDN-QDKPHNGSGQAEGMGNSDQNGK-LNKKRKDQNEDEDD--E 183
QHVVRRK + K+ +S +D ++GS + + S+ + + L K R + + +
Sbjct: 125 QHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDR 184
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
DD +D DP KK RVVWS+ELH++FV AVN+LGIDKAVPK+IL+LMNV L+RENV
Sbjct: 185 DDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENV 244
Query: 244 ASHLQKYRLYLKRISCVANQQ---------ANMVAALGSSDPSYLRMSSVNG--LGNYHT 292
ASHLQK+RLYLKR+S A+Q N+ A + S ++++ G + N+H+
Sbjct: 245 ASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPIDNHHS 304
Query: 293 ----VGGP----GQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSG 331
V P G+ QN F +S N P + +HGL SS
Sbjct: 305 ASFGVWIPNDNLGRSQNEHFSVDVSSAS----NRPVSVAVHGLSSSA 347
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 182/257 (70%), Gaps = 12/257 (4%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK--NKFDL 63
++ D FP+GLRVLAVDDD CL +LE L+ C Y+ T S A TAL +LRE K N+FDL
Sbjct: 1 MDADTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDL 60
Query: 64 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
VISDV MP+MDGFKLLEL+GLEMDLPVIMLS N + + +MKGI HGACDY++KPVR+E+L
Sbjct: 61 VISDVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQL 120
Query: 124 KNIWQHVVRRKKIDAKDQNNS---DNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
+ IW HVV+ D ++ NS D+ K G+G ++ K +KK K + D
Sbjct: 121 RGIWTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGMKDGANHRNKYSKKNK-KVVDV 179
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
DED E+ + QKK RV W +LH+KFV AV+Q+GID+A PKKIL +MNVE LTR
Sbjct: 180 ADEDS------ENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTR 233
Query: 241 ENVASHLQKYRLYLKRI 257
ENVASHLQKYR+YL+++
Sbjct: 234 ENVASHLQKYRIYLRKL 250
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 177/249 (71%), Gaps = 25/249 (10%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLR---ENKNKFDLVISDV 68
PSGL+VL VDDDP CL ++ +L+RC Y V T + AL LLR E+ ++FDLV+SDV
Sbjct: 31 PSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE +GLE+DLPVIM+S NGD +V++G+THGA D+L+KPVR+EEL+N+WQ
Sbjct: 91 YMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVWQ 150
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVRR+ + H G SD++ L+ ++ + ++ E
Sbjct: 151 HVVRRRSL--------------HVGRA-------SDEHSGLDLEQHQHHHGVKRKEVEAL 189
Query: 189 H-NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
HE KKPRVVWSVE+H++FV AVNQLG+DKAVPK+ILDLMNVE LTRENVASHL
Sbjct: 190 QVQHETQGANKKPRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENVASHL 249
Query: 248 QKYRLYLKR 256
QKYRLYLKR
Sbjct: 250 QKYRLYLKR 258
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/255 (56%), Positives = 183/255 (71%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+GL+VL VDDD L +LE +LR C+Y VTT + A AL +LREN++ FDLVISDV+MP
Sbjct: 12 PAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMP 71
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE +GLE+DLPVIM+S +G+ VM+GI HGACDYLLKPVR+EEL+NIWQHVV
Sbjct: 72 DMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHVV 131
Query: 132 RR---KKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
R+ + +K+++ ++ H N+D + ++KRK++ EDE
Sbjct: 132 RKLVSPILVSKEESGELDEYPKHQ--------DNADFDAT-SRKRKERLEDE-------T 175
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
ED KK R+VWS ELH++FV AVN LG+DKAVP+KILD+MNV+ LTRENVASHLQ
Sbjct: 176 QLVEDVNNLKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQ 235
Query: 249 KYRLYLKRISCVANQ 263
KYR YLKR+ V Q
Sbjct: 236 KYRSYLKRLIGVTPQ 250
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 178/271 (65%), Gaps = 28/271 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K +D+VISDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 129 HVVRRKKIDAKDQNNSDNQDK---PHNGSGQAE-GMGNSDQNGKLNKKRKDQNEDEDDED 184
HV R+K + +D + + NGS Q E G ++ KKRK D++D
Sbjct: 132 HVFRKKIHEVRDIETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHFESKHDEKD 191
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID------------------KAVP 226
D + KK RVVWSV+LH+KFV AVNQ+G D + P
Sbjct: 192 TGDS------ISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGP 245
Query: 227 KKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KKILD+MNV LTRENVASHLQKYRLYL R+
Sbjct: 246 KKILDMMNVPWLTRENVASHLQKYRLYLSRL 276
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 194/303 (64%), Gaps = 27/303 (8%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M+V QFP G+RVLAVDDD TCL ++ +L RC Y VT A AL LLRE+ ++
Sbjct: 10 MSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSR 69
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD+V+SD+HMPD+ G KLLE++GLEMD+PV+M+S + + +MKGI HGACDY +KPVR+
Sbjct: 70 FDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRM 129
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
+ ++ +WQHV+R+++ K+ ++ D EG GN + + + +K+
Sbjct: 130 DAIQLVWQHVIRKRRNGLKEMEHAMEDD--------VEG-GNEEGSRSMKRKK------- 173
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
D +DE + + PTT KKPR+VW+ LH++FVAAVNQLG KAVPKKIL+ MN+ LTR
Sbjct: 174 -DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTR 232
Query: 241 ENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQ 300
ENVASHLQK+RLYL R+S ++ + +Y+ +S+NG V G Q
Sbjct: 233 ENVASHLQKFRLYLSRVSEISQ----------GPEKTYMNPASLNGCNPQLNVVGEVPLQ 282
Query: 301 NST 303
T
Sbjct: 283 GLT 285
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/288 (52%), Positives = 185/288 (64%), Gaps = 46/288 (15%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYH------------------VTTTSQAITALK 52
FP GLRVL VDDDPT L +LE +LR+C Y VTT A AL+
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQ 68
Query: 53 LLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVI----------MLSGNGDPKLV 102
+LRE +NKFD+VISDV+MPDMDGFKLLEL+GLEMDLPVI ++S +G+ V
Sbjct: 69 ILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDGETSRV 128
Query: 103 MKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGN 162
MKG+ HGACDYLLKPVR++EL+NIWQHV R+K + K+ +G +
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKE---------IEDGLDERGLFMR 179
Query: 163 SDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID 222
+D + +KRK+ ++D D+D D T KK RVVWSV+LH+KFV AVNQ+G D
Sbjct: 180 ADTDTM--RKRKEVDKDHADQDSSDG------ATAKKARVVWSVDLHQKFVNAVNQIGFD 231
Query: 223 KAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAA 270
K PKKILDLMNV LTRENVASHLQKYRLYL R+ N++ M AA
Sbjct: 232 KVGPKKILDLMNVHGLTRENVASHLQKYRLYLSRLQ-KQNEERIMGAA 278
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 180/254 (70%), Gaps = 17/254 (6%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GLRVL VDDDPT L +LE +L++C Y VTT A AL+LLRE K+ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE VGLE+DLPVIM+S +G+ VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSG-------QAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
R+K + +D + G G +A +G ++ KKRKD + ++
Sbjct: 128 RKKLQEVRDIEGCG-----YEGGGDWITRYDEAHFLGGG-EDVSFGKKRKDFDFEKKLLQ 181
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTRENV 243
DE D + ++ KK RVVWS ELH+KFV AVNQ+G D KA PKKILDLMNV LTRENV
Sbjct: 182 DESDPSS---SSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENV 238
Query: 244 ASHLQKYRLYLKRI 257
ASHLQKYRLYL R+
Sbjct: 239 ASHLQKYRLYLSRL 252
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/345 (46%), Positives = 209/345 (60%), Gaps = 27/345 (7%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDD + L + L VTT A ALK LRE K +D+VISDV
Sbjct: 13 DAFPAGLRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLRERKEAYDIVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKP-----HNGSGQAEGMGN--SDQNGKLNKKRKDQNEDED 181
HV R++ +A+D + + D NGS ++ GN + + KKRKD + D
Sbjct: 131 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDD-GNLFAVEETTSIKKRKDADNKHD 189
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
D++ D PT KK RVVWSV+LH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 190 DKEFGDHF----PT--KKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 243
Query: 242 NVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQN 301
NVASHLQKYRLYL R+ +Q+++ S PS LG++ + + QN
Sbjct: 244 NVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPS-------KDLGSFSFLNTANKQQN 296
Query: 302 STFR---SFPASGMLGRLNAPAGLG-MHGLPSSGMIPMRHAQNSD 342
S+ +L +++A + G + G+ S R A S+
Sbjct: 297 DIATDSFSYSDGTLLIQMDATSYEGDLKGIVSEPTTEKRRASTSE 341
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 174/245 (71%), Gaps = 17/245 (6%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+ + FP+GL+VL VDDDP CL ++E +LRRC Y VTT AL+ LR+ FDLV+S
Sbjct: 46 SWEMFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKLRDRSVHFDLVLS 105
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DV+MPDMDGFKLLE +GLE+DLPVIM+S NG+ +V++G+THGA D+L+KPVR+EEL+N+
Sbjct: 106 DVYMPDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLRGVTHGAVDFLIKPVRVEELRNV 165
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDD---E 183
WQHVVRRK+ A Q D++D SD+ G + K +D+ E
Sbjct: 166 WQHVVRRKRDQAVSQAR-DSRDI-------------SDEEGTDDGKPRDKKRKEVILVLW 211
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D + +D + KK RVVWSVE+H++FV AVNQLGIDKAVPK+ILDLMNV+ LTRENV
Sbjct: 212 WDMQRRDSDDGVSAKKARVVWSVEMHQQFVQAVNQLGIDKAVPKRILDLMNVDGLTRENV 271
Query: 244 ASHLQ 248
ASHLQ
Sbjct: 272 ASHLQ 276
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/239 (56%), Positives = 168/239 (70%), Gaps = 4/239 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLR+L VDDDP CL ++E +LR+C Y VT S A TAL +LR+ ++DLV+SDV+M
Sbjct: 1 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYM 60
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
PDMDGF+LLELVGLEMDLPVIM+S NGD V++G+THGACDYL+KPVR+EEL+N+WQHV
Sbjct: 61 PDMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHN 190
VRR++ D + G G N Q KLN+ + N
Sbjct: 121 VRRRRQRKADAAGQRERRVGPLGGGACVRRVNRAQPSKLNQGHVQRERGRGRVGKAPLLN 180
Query: 191 HEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+ KK RVVWSVE+H++FV AVNQLGIDKAVPKKIL++M V+ LTRENVASHLQK
Sbjct: 181 ----GSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTRENVASHLQK 235
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 178/255 (69%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GLRVL VDDDPT L +LE +L++C Y VTT A AL+LLRE K+ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE VGLE+DLPVIM+S +G+ VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD--------QNGKLNKKRKDQNEDEDDE 183
R+K + +D + G A+ + D ++ KKRKD + ++
Sbjct: 128 RKKLQEVRDIEGCGYE-------GGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTREN 242
DE D + ++ KK RVVWS ELH KFV AVNQ+G D KA PKKILDLMNV LTREN
Sbjct: 181 QDESDPSS---SSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTREN 237
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYL R+
Sbjct: 238 VASHLQKYRLYLSRL 252
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 178/255 (69%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GLRVL VDDDPT L +LE +L++C Y VTT A AL+LLRE K+ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE VGLE+DLPVIM+S +G+ VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD--------QNGKLNKKRKDQNEDEDDE 183
R+K + +D + G A+ + D ++ KKRKD + ++
Sbjct: 128 RKKLQEVRDIEGCGYE-------GGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTREN 242
DE D + ++ KK RVVWS ELH KFV AVNQ+G D KA PKKILDLMNV LTREN
Sbjct: 181 QDESDPSS---SSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTREN 237
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYL R+
Sbjct: 238 VASHLQKYRLYLSRL 252
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 216/367 (58%), Gaps = 50/367 (13%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
++FP+GLRVL VDDD TCLL+LE +LR C Y VT +A AL +LRE+KNKFD+V+ D
Sbjct: 28 SNEFPAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVID 87
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
+HMPDMDGF+LLE+ EM LPV+M+S + D +++ KG+ HGACDYL+KPVR+E LK IW
Sbjct: 88 LHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIW 147
Query: 128 QHVVRRKKIDAKD--------QNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNED 179
QHV+R+KK AKD +++ KP + G N+ +N K ++R ++ +D
Sbjct: 148 QHVIRKKKNTAKDELEQLIGLEDDILLLTKPDSDDDMIHGNLNNTRNSK--RRRNNEYDD 205
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDL---MNVE 236
E DP K R++W+ ELH KFV A N LG + AVP KIL+ MNV
Sbjct: 206 EP----------SDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKILECLQRMNVH 255
Query: 237 KLTRENVASHLQKYRLYLKRISCVAN-QQANMVAALGSSDPSYLRMSSVNGLGNYHTVGG 295
+TRE++ASHLQKYR+YL++ + +Q +++ PS RM+ + L H
Sbjct: 256 SITREHIASHLQKYRMYLRKQDDIPQLKQEHLL-------PS--RMNKTSILEQPHPSDN 306
Query: 296 PGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGM-IPMRHAQNSDNTTNDQGK-FHP 353
QF +TF P L H P + + P+ NSD T +DQGK +P
Sbjct: 307 -LQFCTNTF--------------PFPLPCHTTPQARLRAPLSTITNSDWTYDDQGKLLYP 351
Query: 354 ALLPGSH 360
++ S+
Sbjct: 352 GMVESSY 358
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/255 (56%), Positives = 177/255 (69%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GLRVL VDDDPT L +LE +L++C Y VTT A AL+LLRE K+ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE VGLE+DLPVIM+S +G+ VMKG+ GACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD--------QNGKLNKKRKDQNEDEDDE 183
R+K + +D + G A+ + D ++ KKRKD + ++
Sbjct: 128 RKKLQEVRDIEGCGYE-------GGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTREN 242
DE D + ++ KK RVVWS ELH KFV AVNQ+G D KA PKKILDLMNV LTREN
Sbjct: 181 QDESDPSS---SSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTREN 237
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYL R+
Sbjct: 238 VASHLQKYRLYLSRL 252
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 167/241 (69%), Gaps = 13/241 (5%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD--- 67
FP+GLR+L VDDDP CL ++E +LR+C Y VTT + A AL LLR+ ++DLV+SD
Sbjct: 24 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFL 83
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
V DMDGFKLLE+VGLEMDLPVIM+S NGD V++G+THGACDYL+KPVR+EEL+N+W
Sbjct: 84 VSSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLW 143
Query: 128 QHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
QHVVRR++ + SG A G+G++ G + DE
Sbjct: 144 QHVVRRRR---------QLRMMGAGCSGGANGLGSTGNLGAVATGSAGLGLGLGTAADEL 194
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + KK RVVWSVE+H++FV AVNQLGIDKAVPKKIL++MNV+ LTRENVASHL
Sbjct: 195 GLGL-DNGSSKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNVDGLTRENVASHL 253
Query: 248 Q 248
Q
Sbjct: 254 Q 254
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 177/260 (68%), Gaps = 18/260 (6%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M+V QFP G+RVLAVDDD TCL ++ +L RC Y VT A AL LLRE+ ++
Sbjct: 10 MSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSR 69
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD+V+SD+HMPD+ G KLLE++GLEMD+PV+M+S + + +MKGI HGACDY +KPVR+
Sbjct: 70 FDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRM 129
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
+ ++ +WQHV+R+++ K+ ++ D EG GN + + + +K+
Sbjct: 130 DAIQLVWQHVIRKRRNGLKEMEHAMEDD--------VEG-GNEEGSRSMKRKK------- 173
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
D +DE + + PTT KKPR+VW+ LH++FVAAVNQLG KAVPKKIL+ MN+ LTR
Sbjct: 174 -DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTR 232
Query: 241 ENVASHLQKY-RLYLKRISC 259
ENVASHLQ +++ ++I C
Sbjct: 233 ENVASHLQVMEKIFSRKIYC 252
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 138/258 (53%), Positives = 173/258 (67%), Gaps = 25/258 (9%)
Query: 53 LLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACD 112
+LREN+ FD++ISDVHMPDM+GF+LLELVGLEMDLPVIM+S + LVMKGI HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 113 YLLKPVRIEELKNIWQHVVRRK-----------KIDAKDQNNSDNQDKPHNGSGQAEGMG 161
YL+KPVR+EELKNIWQHVVR+K +D D+N N D + S
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSAN----D 116
Query: 162 NSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGI 221
++ + K KK++D+ ED+ + + D N+ KK RVVWSVELH++FV AVN LGI
Sbjct: 117 GAEDSWKSQKKKRDKEEDDSELESGDPSNNS-----KKLRVVWSVELHQQFVNAVNHLGI 171
Query: 222 DKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRM 281
DKAVPKKIL+LMNV LTRENVASHLQK+RLYLKRI A A M G S ++
Sbjct: 172 DKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRI---AQHHAGMANPYGVP-ASSAQV 227
Query: 282 SSVNGLGNYHTVGGPGQF 299
+S+ GL ++ + GQ
Sbjct: 228 ASLGGL-DFQALAASGQI 244
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 185/248 (74%), Gaps = 10/248 (4%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
GD+FP GL V+A+DDD CL +LE L+ +C Y+VTTT+QAI L +LR+N NKFDL+ISD
Sbjct: 73 GDRFPVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISD 132
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGN--GDPKLVMKGITHGACDYLLKPVRIEELKN 125
V++PDMDGFKLLELVGL+MDLP I + + + GAC+YL KP+RIEEL+N
Sbjct: 133 VNIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQN 192
Query: 126 IWQHVVRRKKIDAKDQNNS-DNQDKPHNGSGQ-AEGMG---NSDQNGKLNKKRKDQNEDE 180
IW+HV+R +ID+KD+N + N++K +G+ ++ M N+DQN KL +KRK+Q+EDE
Sbjct: 193 IWKHVLRM-RIDSKDKNKTFANEEKASYMAGECSQAMAPKNNTDQNIKLGQKRKEQSEDE 251
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
++E+ ++ Q KPR+VW VELHRKF+ AV+ LGIDKA PK+ILDLMNVE LTR
Sbjct: 252 EEEEYHKENEEH--LNQNKPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEGLTR 309
Query: 241 ENVASHLQ 248
ENVASHLQ
Sbjct: 310 ENVASHLQ 317
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 179/271 (66%), Gaps = 57/271 (21%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+ D+FP G+RVLAVD D T L LET LR CQYHVTTTSQA TAL +LRENK+KFDLVI+
Sbjct: 4 SSDRFPIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIA 63
Query: 67 DVHMPDMDGFKLLELVGLEMDLP-VIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
DVH+PDMDG KLLELV LE DLP V+MLS + D +LVMK + HGA D+L+KPVR++ELK
Sbjct: 64 DVHLPDMDGLKLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKT 123
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
IWQHV+R+KK DN+
Sbjct: 124 IWQHVIRKKK---------DNE-------------------------------------- 136
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
D + QKK + VWSVELH KFVAAVNQLGIDKAVP+KIL LMNVE +TRE+VAS
Sbjct: 137 -------DLSAQKKSQSVWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDVAS 189
Query: 246 HLQKYRL--YLKRISCVANQQANMVAALGSS 274
HL+KYRL Y+K++S VANQ A+ + A S
Sbjct: 190 HLRKYRLIDYVKKVSSVANQHASSLVAASRS 220
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 230/406 (56%), Gaps = 58/406 (14%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VDDDPTCL++LE +L C Y Q L R KN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDDDPTCLMILERMLMTCLYR----EQRAHCLCFGR-TKNGFDIVIS 74
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVI----------MLSGNGDPKLVMKGITHGACDYLLK 116
DVHMPDMDGFKLLE VGLEMDLPVI ++S + +V+KG+THGA DYL+K
Sbjct: 75 DVHMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADDSKSVVLKGVTHGAVDYLIK 134
Query: 117 PVRIEELKNIWQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGM 160
PVRIE LKNIWQHVVR+K+ + +D+ +D +N S EG
Sbjct: 135 PVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG- 193
Query: 161 GNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG 220
NG+ ++KRK+ E+ DD+ D+ ED ++ KKPRVVWSVELH++FVAAVNQLG
Sbjct: 194 -----NGRSSRKRKE--EEVDDQGDDK----EDSSSLKKPRVVWSVELHQQFVAAVNQLG 242
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYL 279
+D + +L + V + N+ QKYR+YL+R+ V+ Q NM + + D S+
Sbjct: 243 VDSELKTCLLMHLCV---SIGNIV-EFQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFG 298
Query: 280 RMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQ 339
+SS+NG + ++ GQ + A+G LGR L G+ S ++ R
Sbjct: 299 PLSSLNGF-DLQSLAVTGQLPPQSLAQLQAAG-LGR----PTLAKPGMSVSPLVDQRSIF 352
Query: 340 NSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITS 385
N +N G H + ++GN+L G+PT + +L+ +N+ S
Sbjct: 353 NFENPKIRFGDGHGQTM---NNGNLLHGVPTGSHM-RLRPGQNVQS 394
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 175/259 (67%), Gaps = 17/259 (6%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+G QFP GLRVLAVDD+ CL +L TLL +C+Y VT T++A AL++LREN+ FD+VI+
Sbjct: 140 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVIT 199
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DV MPDMDGF LL+++GLEMD+PVIM S N D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 200 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 259
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
WQHVVR+ D+ KP G + + M K + +++ ED E
Sbjct: 260 WQHVVRKNLFDS---------GKP--GVKEEKAMEMEKSKEKGGGEEEEEEEDHPKE--- 305
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVAS 245
H+ ED + +KK R+ W+ ELH KF+ A++QL DKAVPKKIL++MN L+RENVAS
Sbjct: 306 --HSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRENVAS 363
Query: 246 HLQKYRLYLKRISCVANQQ 264
HLQKYR L++ +QQ
Sbjct: 364 HLQKYRKMLRKNCAKVSQQ 382
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/319 (45%), Positives = 178/319 (55%), Gaps = 76/319 (23%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRVL VDDDPT L +LE +L++C Y VTT A AL LLRE K +D+VISDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVI------------------------------------- 91
+MPDMDGFKLLE VGLEMDLPVI
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGILI 131
Query: 92 -----------MLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKD 140
++S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV R+K + +D
Sbjct: 132 QLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD 191
Query: 141 QNNSDNQDK---PHNGSGQAE-GMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTT 196
+ + NGS Q E G ++ KKRK D++D D +
Sbjct: 192 IETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHIESKHDEKDTGDS------IS 245
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGID------------------KAVPKKILDLMNVEKL 238
KK RVVWSV+LH+KFV AVNQ+G D + PKKILD+MNV L
Sbjct: 246 TKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKKILDMMNVPWL 305
Query: 239 TRENVASHLQKYRLYLKRI 257
TRENVASHLQKYRLYL R+
Sbjct: 306 TRENVASHLQKYRLYLSRL 324
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 174/259 (67%), Gaps = 18/259 (6%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+G QFP GLRVLAVDD+ CL +L TLL +C+Y VT T++A AL++LREN+ FD+VI+
Sbjct: 148 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIVIT 207
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DV MPDMDGF LL+++GLEMD+PVIM S N D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 208 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 267
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
WQHVVR+ D+ KP +A M S + ++ + ED
Sbjct: 268 WQHVVRKNLFDS---------GKPGVKEEKAMEMEKSKEKEGGGEEEE--------EDHP 310
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVAS 245
+H+ ED + +KK R+ W+ ELH KF+ A++QL DKAVPKKIL++MN L+RENVAS
Sbjct: 311 KEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRENVAS 370
Query: 246 HLQKYRLYLKRISCVANQQ 264
HLQKYR L++ +QQ
Sbjct: 371 HLQKYRKMLRKNCAKVSQQ 389
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 172/274 (62%), Gaps = 45/274 (16%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK---NKFDLV 64
D FP+GLRVLAV+ D C +LE L+ C Y+ T + A TAL +LRE K N+FDLV
Sbjct: 3 ADTFPAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLV 62
Query: 65 ISDVHMP--DMDGFKLLELVGLEMDLPVI------------------MLSGNGDPKLVMK 104
IS+V MP +MDGFKLLEL+GLEMDLPVI +LS N + + +MK
Sbjct: 63 ISNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMK 122
Query: 105 GITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD 164
GI HGAC+Y++KPVR+E+L+ IW HVV+ K D + K G G
Sbjct: 123 GIKHGACEYMVKPVRLEQLRGIWTHVVKNSKTDHAIR-------KLPCGDGD-------- 167
Query: 165 QNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKA 224
K K+ + D D + ++ +TQKK RV W ELH+KFV A+NQ+G+D+A
Sbjct: 168 -------KVKNYSRKNKMVVDVADDDKDNTSTQKKQRVQWCGELHQKFVQAINQIGMDRA 220
Query: 225 VPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
VPKKIL++MNVE LT+ENVASHLQKYR+YL+++S
Sbjct: 221 VPKKILEVMNVEGLTKENVASHLQKYRIYLRKLS 254
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 154/225 (68%), Gaps = 9/225 (4%)
Query: 33 LLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIM 92
+L++C Y +TT A AL +L+E KN FD++ISDV+MPDMDGF+LLE + +EMDLPVI+
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHN 152
+S +G+ VMKG+ GACDYLLKPVR+EELKNIWQHV+R+K + K+ ++
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNEL 120
Query: 153 GSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKF 212
GQ G +KRKD + DD +P+T KK RVVWS++LH+KF
Sbjct: 121 DDGQQLNGGEVSA----TRKRKDM-----ENRRHDDQKSVEPSTSKKARVVWSIDLHQKF 171
Query: 213 VAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V V Q+G DKA PKKILDLMNV LTRENVASHLQKYR YL ++
Sbjct: 172 VDVVTQIGYDKARPKKILDLMNVPWLTRENVASHLQKYRFYLSKL 216
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/278 (48%), Positives = 169/278 (60%), Gaps = 39/278 (14%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRR--------CQY-------HVTTTSQAITALKL 53
D FP+GLRVLAVDDDP L +L + R+ C+ VTT A AL +
Sbjct: 8 DAFPAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSM 67
Query: 54 LRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDY 113
L+E KN FD++ISDV+MPDMDGF+LLE + +EMDLPVI++S +G+ VMKGI GACDY
Sbjct: 68 LQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRVMKGIQSGACDY 127
Query: 114 LLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKR 173
LLKPVR+EELKNIWQHV+R+K + K+ ++ GQ G +KR
Sbjct: 128 LLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNELDDGQQLNGGEVSA----TRKR 183
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDK---------- 223
KD DD +P+T KK RVVWS++LH+KFV V Q+G D+
Sbjct: 184 KDMENRR-----HDDQKSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDRFCIDGVLMVI 238
Query: 224 ----AVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
A PKKILDLMNV LTRENVASHLQ YR YL ++
Sbjct: 239 HLTEARPKKILDLMNVPWLTRENVASHLQ-YRFYLSKL 275
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 183/294 (62%), Gaps = 22/294 (7%)
Query: 8 GDQF-PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
GD F P+ LRVLA+D + CL L +L++CQY VT+T+ A ALK+LRENKN + +VI+
Sbjct: 19 GDMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVIT 78
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DV DMDGFKLLE++GLEMDLPVI++S +MKGI HGA DYLLKPVRI+E++NI
Sbjct: 79 DVKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQNI 138
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGS-GQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
WQHVVR++ D+ D+++S ++ S E M ++ G E +
Sbjct: 139 WQHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEPMAEAEVTGV-------------KEKE 185
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGI--DKAVPKKILDLMNVEKLTRENV 243
+ + D + KKPRV WS ELH KFV V +L ++ PK+I ++MNVE L+REN+
Sbjct: 186 IIGNPNGDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGLSRENI 245
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSV-NGLGNYHTVGGP 296
ASHLQKYR LK+ NQQ N G+ Y R+S+ NGL N + P
Sbjct: 246 ASHLQKYRNLLKKHKDKMNQQDNA----GTDLNRYGRISATKNGLWNTYGDSTP 295
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 161/233 (69%), Gaps = 19/233 (8%)
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMDGFKLLE VGLEMDLPVIM+S + +VMKG+THGACDYL+KPVR+E LKNIWQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 130 VVRRKKIDA------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE 183
VVR+KK + + + D + +P N N K +K+RK+ E ED E
Sbjct: 61 VVRKKKYEWKEKEQEQSGSVEDGERQPKQEDVDYSSSANEGNNWKSSKRRKEDEEGEDKE 120
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
D +T KKPRVVWSVELH++FV AVNQLGIDKAVPKKIL+LM+V L+RENV
Sbjct: 121 DT---------STLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPGLSRENV 171
Query: 244 ASHLQKYRLYLKRISCVANQQANMVAALGSSDPSY--LRMSSVNGLGNYHTVG 294
ASHLQKYRLYLKR+S +Q + +G +DPS+ L +VNGL ++HT+
Sbjct: 172 ASHLQKYRLYLKRLSG-QHQNGLGNSYMGPTDPSFGPLNPLNVNGL-DFHTLA 222
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 158/248 (63%), Gaps = 22/248 (8%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP+GLRVL VD+DPT +LE +L++C Y V T AL +LR K+++D+VI DV
Sbjct: 14 FPAGLRVLVVDNDPTWSRILEKMLKKCSYQVATCGSR-DALNMLRGRKDEYDIVICDVTT 72
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
DMDGF+LLE +GL+MD PVI S + KG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 SDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQA-EGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ + ++ GS QA +G ++ KKRK ++
Sbjct: 133 FRKRIHEVRECEIL--------GSDQACDGPLLRGEDLASVKKRKYADQ----------- 173
Query: 190 NHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
D ++ K R+VW+V+LH+KFV AV+Q+G DK PKKILD MNV LTRENVA HLQK
Sbjct: 174 -KADISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGHLQK 232
Query: 250 YRLYLKRI 257
YRLYL R+
Sbjct: 233 YRLYLSRL 240
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 135/198 (68%), Gaps = 10/198 (5%)
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPD+DGFKLLE++ E++LPV+M+S N D +V++GI HGA DYLLKPVRIEEL+NIWQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 130 VVRR----KKIDAKDQNNSDNQDKPHNGSG------QAEGMGNSDQNGKLNKKRKDQNED 179
VVRR + ++D N + K SG + E N + K KK +
Sbjct: 61 VVRRDYSARNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAANEAGSSKARKKPAGKKGA 120
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
+ ++ E + + + KKPRVVWS ELH +FV AVNQLGIDKAVPK+ILDLM ++ LT
Sbjct: 121 KGSKEKEAERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILDLMGIQGLT 180
Query: 240 RENVASHLQKYRLYLKRI 257
RENVASHLQKYRLYLKR+
Sbjct: 181 RENVASHLQKYRLYLKRL 198
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 150/249 (60%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTKSTATEALLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D +K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 149/249 (59%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 149/249 (59%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 197 bits (502), Expect = 1e-47, Method: Composition-based stats.
Identities = 107/213 (50%), Positives = 142/213 (66%), Gaps = 16/213 (7%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+G QFP GLRVLAVDD+ CL +L TLL +C+Y VT T++A AL++LREN+ FD+VI+
Sbjct: 11 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVIT 70
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DV MPDMDGF LL+++GLEMD+PVIM S N D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 71 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 130
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
WQHVVR+ D+ KP G + + M K + +++ ED E
Sbjct: 131 WQHVVRKNLFDS---------GKP--GVKEEKAMEMEKSKEKGGGEEEEEEEDHPKE--- 176
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL 219
H+ ED + +KK R+ W+ ELH KF+ A++QL
Sbjct: 177 --HSFEDGSVRKKQRLNWTSELHIKFLNAIHQL 207
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 152/252 (60%), Gaps = 15/252 (5%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
GL ++ VDDD CL ++ +L+ +Y V T + A AL LR N F L+++DVHMP+M
Sbjct: 20 GLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEM 79
Query: 74 DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
DGF+ LV E LPV+M+S + +++G+ GA Y++KPV ++LKN+WQ+ V
Sbjct: 80 DGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVGX 139
Query: 134 KKIDA--------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
KK + + Q S + +N + E + N +++ K + KRK + +
Sbjct: 140 KKGKSHIVMQEIERTQGASXLEKTSNN---EVESLMNEEKHNKRDSKRKTLKKTNEGNGK 196
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
E + KK +V+W+ LH +F+ A ++G+++AVPK+IL++MNV LTRENVAS
Sbjct: 197 EKS----ETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVAS 252
Query: 246 HLQKYRLYLKRI 257
HLQKYR++LKR+
Sbjct: 253 HLQKYRIFLKRV 264
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 148/249 (59%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D K R+ W+ +LHR+F+AAVN L DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/127 (77%), Positives = 115/127 (90%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDDDPT LLLLETLLR CQYHVTTTS+AITAL +L+EN + FDLVI++V
Sbjct: 6 DRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEV 65
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDG KLLELVGLEMDLPVIMLS +G+ +LVMK I+HGA D+LLKPVR+EEL+NIWQ
Sbjct: 66 HMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQ 125
Query: 129 HVVRRKK 135
HV+R K+
Sbjct: 126 HVIRNKE 132
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 73/125 (58%), Gaps = 36/125 (28%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K+ + VWSVELHRKF+ VNQLG+DKAVPKKI DLMNVE +TRE+VA+HLQKYRL+LKR+
Sbjct: 131 KESQFVWSVELHRKFLETVNQLGVDKAVPKKIFDLMNVENITREDVATHLQKYRLFLKRM 190
Query: 258 SCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLN 317
G F N+T RSF +G++G LN
Sbjct: 191 D------------------------------------SSGHFHNNTIRSFSPAGIVGNLN 214
Query: 318 APAGL 322
PAGL
Sbjct: 215 TPAGL 219
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 151/251 (60%), Gaps = 12/251 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+++L VDDD L ++ ++L+ C V T + AL L+ + FDLVI+D+HMP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
G +L + + E +PV+++S +G +++ + GA Y++KPV + +LKN+WQ+ + K
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 135 KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD-------ED 187
K K+ + ++P N G+A D N NE+ +++ +
Sbjct: 141 K--GKEVVVA---EEPENNDGEASASTEKDSCEDNNSASVSANEESNNKKKKGKKRARDH 195
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + P+ KK +VVW+ LH +F+ A+N +G+DKAVPK+IL+ MNV LTRENVASHL
Sbjct: 196 DQGEDAPSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENVASHL 255
Query: 248 QKYRLYLKRIS 258
QKYRL+LK+++
Sbjct: 256 QKYRLFLKKVA 266
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 153/267 (57%), Gaps = 19/267 (7%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M E QF GL V+AVDDD T L +++ + +C Y V T S A AL + ENK++
Sbjct: 1 MATEQNVSFQF-EGLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDR 59
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
D+++ DVH+P+MDG++ L+ + E+D+PVI++S +G V K ITHGACDY KP
Sbjct: 60 IDVILVDVHLPNMDGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSE 119
Query: 121 EELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
+ K +W+HV + + N+ K D N K ++K N E
Sbjct: 120 NQFKIMWKHVAMK----------AWNEKKLQKKDFSEFASSVLDANLK-DQKEISSNSKE 168
Query: 181 DDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 240
D DD D KKPR+ W ELH +FV AV +G+DKA PKKIL++MN+ LT+
Sbjct: 169 SDVDDCD-------AQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTK 221
Query: 241 ENVASHLQKYRLYLKRISCVANQQANM 267
++VASHLQKYR LK+ + VA QQ M
Sbjct: 222 DHVASHLQKYRFDLKKSNEVAVQQNEM 248
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 109/140 (77%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
MT E FP+GLRVL VDDDP CL ++E +L+RCQY VTT S+ AL+ LR ++
Sbjct: 1 MTAEKKELKVFPAGLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALETLRARRDD 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
FD+V+SDVHMPDMDGFKLLE + LE+D+PV+M+S N +V++GI HGA DYLLKPVR+
Sbjct: 61 FDIVLSDVHMPDMDGFKLLEHIALELDVPVMMMSANCATDVVLRGIIHGAVDYLLKPVRL 120
Query: 121 EELKNIWQHVVRRKKIDAKD 140
EEL+NIWQHVVRR++ +KD
Sbjct: 121 EELRNIWQHVVRRQREPSKD 140
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 156/239 (65%), Gaps = 4/239 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLR+L D+D + L +LET L++ QY VT ++ A+ LR ++N+FD+ I +
Sbjct: 35 FPEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQGNN 94
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
D D F+ L +G EMDLP+I++S + + VMK + +GA DYL+KP++ EEL+ I++H+
Sbjct: 95 SDGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIFKHL 154
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHN 190
V++ + + + + ++K G ++ +G+S +KR + E +E+D DHN
Sbjct: 155 VKKVR-ERRSVVTGEAEEKA--GGEKSSSVGDSTIRNPNKRKRSMCLDAEVNEEDRHDHN 211
Query: 191 HED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+ KK RVVW+ ELH+KFV AV LG+DKAVPKKIL+LMNVE L+RENVASHLQ
Sbjct: 212 DRACAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSRENVASHLQ 270
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 151/266 (56%), Gaps = 31/266 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH--------VTTTSQAITALKLLRENKNKFDLVIS 66
+++L VDDD T L ++ +L+ C Y V T AL LR K FDLV++
Sbjct: 18 IKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLVVT 77
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
D+HMP+M+G +L + V E LPVI++S + K++++ + GA Y++KP+ ++LKN+
Sbjct: 78 DLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDLKNV 137
Query: 127 WQHVVRRK----KIDAKDQNNSDNQDKP----------HNGSGQAEGMGNSDQNGKLNKK 172
WQ+ V K + K+ S S ++ + ++ ++NK
Sbjct: 138 WQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSAKSTNIKICNEKDRINKN 197
Query: 173 RKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDL 232
RK ED++ + KKP+VVW+ LH +F+ A+N +G+DKAVPK+IL+
Sbjct: 198 RKRTKEDQEVDSQ---------LAPKKPKVVWTNSLHSRFLQAINHIGLDKAVPKRILEF 248
Query: 233 MNVEKLTRENVASHLQKYRLYLKRIS 258
M+V L+RENVASHLQKYR++LK+++
Sbjct: 249 MSVPGLSRENVASHLQKYRIFLKKVA 274
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 153/240 (63%), Gaps = 7/240 (2%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL D+DP+ LL+LE L++ QY VT ++ A+ LR ++N+FDL + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+ D F+ L +G EMDLP+I++S + K V K + +GA DYL+KP+R E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQ-AEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V++ + + S + +G+ + +G+S KR E E +E+D DH
Sbjct: 158 VKKMR-----ERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDH 212
Query: 190 NHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
N ++ KK RVVW ELH+ F+ AV+ LG+++AVPKKILD+M V+ ++RENVASHLQ
Sbjct: 213 NDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 147/242 (60%), Gaps = 5/242 (2%)
Query: 26 CLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLE 85
CL ++ +LR +Y V T + AL LR + F LV++DVHMP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 86 MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK---IDAKDQN 142
LPV+M+S + ++KG+ GA Y++KPV ++LKNIWQ+ V +K +D +D
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 143 NSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD-HNHEDPTTQKKP 200
+ ++ P + + ++N+ ++D + ED + D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSPKRT 212
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
+VVW+ LH +F+ AV ++G+++AVPK+IL+LMN+ LTRENVASHLQKYR++L+R++
Sbjct: 213 KVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRVAEA 272
Query: 261 AN 262
+N
Sbjct: 273 SN 274
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 147/242 (60%), Gaps = 5/242 (2%)
Query: 26 CLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLE 85
CL ++ +LR +Y V T + AL LR + F LV++DVHMP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 86 MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK---IDAKDQN 142
LPV+M+S + ++KG+ GA Y++KPV ++LKNIWQ+ V +K +D +D
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 143 NSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD-HNHEDPTTQKKP 200
+ ++ P + + ++N+ ++D + ED + D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSPKRT 212
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
+VVW+ LH +F+ AV ++G+++AVPK+IL+LMN+ LTRENVASHLQKYR++L+R++
Sbjct: 213 KVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRVAEA 272
Query: 261 AN 262
+N
Sbjct: 273 SN 274
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N FP G+R+L V+ DPTCL ++ +L+ Y VTT ++A AL++LRE +++ +L++
Sbjct: 15 NAGSFPIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILI 74
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
+ +PDM+ +++LE +G LP+++ S + + ++ + GA YL+KP+ ++KN+
Sbjct: 75 ETRLPDMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYLMKPIIKNDVKNL 134
Query: 127 WQHVVRRK---KIDAKDQNNSDNQDKPHNGSGQAEG-----MGNSDQNGKLNKKRKDQNE 178
WQ R K + K N+ S G MG +DQ G KRK
Sbjct: 135 WQLTYRTKIKTAVSGKGSNSFHGGSSEEKASSVTAGNPSSTMGMTDQKG----KRK---- 186
Query: 179 DEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL 238
E +E + DD ++ + T KK ++VW+ ELH +F+ A+ LGID A PKKIL MNV L
Sbjct: 187 -ELEETNNDDEDNNNLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPKKILQHMNVPGL 245
Query: 239 TRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQ 298
+ENV+SHLQKYRLYLKR Q A + + PS ++ GG Q
Sbjct: 246 KKENVSSHLQKYRLYLKR-----EQDAMLKTMIRDCHPS----------STFNLQGGFSQ 290
Query: 299 FQNSTF 304
+ NS F
Sbjct: 291 YTNSQF 296
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 145/256 (56%), Gaps = 12/256 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH--------VTTTSQAITALKLLRENKNKFDLVIS 66
+ +L VDDD T L ++ L+ Y V T + AL +LR K FDLV+S
Sbjct: 17 IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVS 76
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
D+HMP+M+G +L + V E LPVI++S + ++ + + GA Y++KP +LKN+
Sbjct: 77 DLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDLKNV 136
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN----KKRKDQNEDEDD 182
W + V K ++ + +P S E + D N + K+ + E+
Sbjct: 137 WHYAVAIKTGNSLSIKEIEGSREPSYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEER 196
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+ +DD + KKP+VVW+ LH +F+ A+N +G+DKAVPK+IL+ M+V L+REN
Sbjct: 197 KSTKDDQEVDSQPASKKPKVVWTNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSREN 256
Query: 243 VASHLQKYRLYLKRIS 258
+ASHLQKYR++LK+++
Sbjct: 257 IASHLQKYRIFLKKVA 272
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 125/186 (67%), Gaps = 17/186 (9%)
Query: 92 MLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 151
++S NGD +VMKGITHGACDY +KP+RIEEL+NIWQHVVRR+ ++
Sbjct: 14 VMSTNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRR-----------GRESLK 62
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRK 211
+ G+ E SD +KKRKD + D D +D ++ K+ RV W+V+LH++
Sbjct: 63 DDLGECEDREASDSPETTSKKRKDTSSG-----DFSDEVIDDISSLKRARVHWTVQLHQQ 117
Query: 212 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAAL 271
FV AVNQLGIDKAVPKKI+++M V+ L+RENVASHLQKYRLYLKR+S A + VA+
Sbjct: 118 FVVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASHLQKYRLYLKRLSG-AISEPYPVASF 176
Query: 272 GSSDPS 277
++D S
Sbjct: 177 QAADDS 182
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 181/325 (55%), Gaps = 39/325 (12%)
Query: 157 AEG-MGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAA 215
AEG G ++N ++++K +D N D+ D+ D++ + + D ++QKKPRVVWSVELHRKFVAA
Sbjct: 82 AEGDNGGVNRNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAA 141
Query: 216 VNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSD 275
VNQLGIDKAVPKKILDLMNVE +TRENVASHLQKYRLYLKR+S A++QAN+ AA G +
Sbjct: 142 VNQLGIDKAVPKKILDLMNVENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRN 201
Query: 276 PSYLRMSSVNGLGNYHTVGGPGQFQ--NSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMI 333
P+Y+ M GL + G+++ +T S P + +L R+N+PA GMHGL S +
Sbjct: 202 PAYVNM----GLDAFRQYNAYGRYRPVPTTNHSQP-NNLLARMNSPA-FGMHGLLPSQPL 255
Query: 334 PMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTK 393
+ H QN+ + TSL N N+ + +P
Sbjct: 256 QIGHNQNN--------------------------LSTSLGNVGGMNNGNLIRGAHMPLQD 289
Query: 394 DNTTFHVS-SGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSG 452
+ F SG A I ++ L+ NN PL + H ++ + + G
Sbjct: 290 TSKCFPTGPSGNSFANIS---NSTQLVTTNNLPLQSLEPSNQQHLGRLHSSADPFNSFVG 346
Query: 453 SSSRLPDHGRCNDNWSSAVQSSGIQ 477
+ D GRCN W +AV SS +Q
Sbjct: 347 EPPQFADLGRCNTTWPTAVSSSNVQ 371
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYH 40
H DQFP G+RVLAVDDDPTCL +LE LL RCQYH
Sbjct: 16 HGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYH 51
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 142/252 (56%), Gaps = 22/252 (8%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ +L VDDD T L ++ +LR C+Y V T + AL LR K FDLV++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
G +L + V E LPVIM+S + P +++K + G Y++KP+ ++++K++WQ+ + K
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 135 KID--------AKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
+ + Q + D + E + + ++ K + QN
Sbjct: 129 NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSIN------ 182
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
+K +V+W+ LH +F+ A+ +G+ KAVPKKIL+ MNV LTRENVASH
Sbjct: 183 --------IPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 247 LQKYRLYLKRIS 258
LQKYR++LKR++
Sbjct: 235 LQKYRIFLKRVA 246
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 142/252 (56%), Gaps = 22/252 (8%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ +L VDDD T L ++ +LR C+Y V T + AL LR K FDLV++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
G +L + V E LPVIM+S + P +++K + G Y++KP+ ++++K++WQ+ + K
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 135 KID--------AKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
+ + Q + D + E + + ++ K + QN
Sbjct: 129 NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSIN------ 182
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
+K +V+W+ LH +F+ A+ +G+ KAVPKKIL+ MNV LTRENVASH
Sbjct: 183 --------IPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 247 LQKYRLYLKRIS 258
LQKYR++LKR++
Sbjct: 235 LQKYRIFLKRVA 246
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 155/261 (59%), Gaps = 20/261 (7%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N F G+R+L V+ DPTCL ++ +L+ Y VTT ++A AL +LRE +++ +L++
Sbjct: 15 NASSFAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILI 74
Query: 67 DVHMPDMDGFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
+ H+PDMD ++++E V + LP+++ S + + ++ + GA YL+KP+ ++KN
Sbjct: 75 ETHLPDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKN 134
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDK---PHNGSGQAEGM-------GNSDQNGKLNKKRKD 175
+WQ R+KK A S++ N S G+ G SDQ GK RK+
Sbjct: 135 LWQLTYRKKKKTAVSSVGSNSFHAGLAEENASSVTAGIPSLLSTTGQSDQMGK----RKE 190
Query: 176 QNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNV 235
E ++D++D ++ T KKP +VW+ ELH +F+ A+ LG+D A PKKIL MNV
Sbjct: 191 LEETDNDDEDN-----DNLTVLKKPELVWTNELHNRFLQAIRILGVDGAHPKKILQHMNV 245
Query: 236 EKLTRENVASHLQKYRLYLKR 256
L +ENV+SHLQKYRL LKR
Sbjct: 246 SGLKKENVSSHLQKYRLSLKR 266
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 18/249 (7%)
Query: 9 DQFPS-GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
++FP+ +RVL VD D LL ++ L+ + Y VT A+ L +NK + DLVI D
Sbjct: 34 EEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVIWD 93
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
HMPD++G L +G EMDLPV+++S + + VM+ I +GACD+L+KPV E + +W
Sbjct: 94 FHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAVLW 153
Query: 128 QHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
+HV R++ + DKP SG E + D+ L + Q+ +E+ +
Sbjct: 154 RHVYRKRM-------SKSGLDKP-GESGTVE--SDPDEYDDLGQDNLYQS-NEEGSKNSS 202
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDL----MNVEKLTREN 242
D E P T KKPR+ W+ ELH KF AV +LG ++KA PK IL MNV+ LTR N
Sbjct: 203 DQKGEKPAT-KKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKYMQEEMNVQGLTRNN 261
Query: 243 VASHLQKYR 251
VASHLQKYR
Sbjct: 262 VASHLQKYR 270
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 122/195 (62%), Gaps = 21/195 (10%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
++P+ KKPRVVWS+ELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTRENVASHLQKYR
Sbjct: 18 DEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYR 77
Query: 252 LYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASG 311
LYLKR+S VA+QQA++VAA G DP +L M + GL +Y S+F P G
Sbjct: 78 LYLKRLSAVASQQASIVAAFGGRDP-FLHMGAFEGLQSYQPFAPCAAL--SSF--IPHHG 132
Query: 312 MLGRLNAPA--------GLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGN 363
LGR A A + + S+GMI + D KF + + + N
Sbjct: 133 SLGRTTAAAFGVPELAPAITVQAAASNGMI--------SHCAGDASKFQLSGIQENQQPN 184
Query: 364 ILQGMPTSLELDQLQ 378
+ QG TSL L QLQ
Sbjct: 185 LGQGSATSLGLPQLQ 199
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 138/237 (58%), Gaps = 7/237 (2%)
Query: 29 LLETLL---RRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLE 85
+L +LL R + V T + AL +LR K FDLV+SD+HMP+M+G +L + V E
Sbjct: 1 MLSSLLTDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEE 60
Query: 86 MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSD 145
LPVI++S + ++ + + GA Y++KP +LKN+W + V K ++ +
Sbjct: 61 FKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTGNSLSIKEIE 120
Query: 146 NQDKPHNGSGQAEGMGNSDQNGKLN----KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPR 201
+P S E + D N + K+ + E+ + +DD + KKP+
Sbjct: 121 GSREPSYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPASKKPK 180
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
VVW+ LH +F+ A+N +G+DKAVPK+IL+ M+V L+REN+ASHLQKYR++LK+++
Sbjct: 181 VVWTNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSRENIASHLQKYRIFLKKVA 237
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 146/251 (58%), Gaps = 13/251 (5%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
+G+ +L VD D CL ++ +L Y V T +A AL +LRE + + DL++++VH+PD
Sbjct: 17 AGVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPD 76
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV- 131
MD ++LLE + LP+++LS + D ++ + GA YLLKP+ + ++K++WQ
Sbjct: 77 MDKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCV 136
Query: 132 --RRKKIDAKDQNNSDNQDKPHNGSGQAEG----MGNSDQNGKLNKKRKDQNEDEDDEDD 185
R+ + + ++ P S +A + S QN + ++ ++ Q D+D+E
Sbjct: 137 KNRKNNVATEGSHSYHGHSTPEIASNEASECLSVLDTSQQNAQKSEGKELQEMDKDEEAT 196
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
T KKP+++W+ ELH +F+ A+ LGID A PKKIL MNV L +EN++S
Sbjct: 197 ------VTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENISS 250
Query: 246 HLQKYRLYLKR 256
HLQKYRL LKR
Sbjct: 251 HLQKYRLSLKR 261
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 115/163 (70%), Gaps = 3/163 (1%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL VDDD CL ++ +L++C Y VT+T+ ++TAL+ LR K +FD+V+SDVHMPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
GFKLLE + L++D+PV+M+S N D +V++GI HGA DYLLKPVRI ELKNIWQHVVR+
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRKN 131
Query: 135 KIDAKDQNNSDNQDKPHNGSGQAE---GMGNSDQNGKLNKKRK 174
D+ ++ S + +G G E GM + +NKK +
Sbjct: 132 GPDSLQRSGSMSMSPARSGRGSPEKDSGMNATSNGTHMNKKLR 174
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 68/88 (77%), Gaps = 8/88 (9%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KKPRVVWS ELH++FV AVNQLGIDKAVPK+ILDLMNV+ LTRENVASHLQKYRLYLKR+
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASHLQKYRLYLKRL 399
Query: 258 SCVANQQ------ANMVA--ALGSSDPS 277
N +N +A A G+S PS
Sbjct: 400 QGGPNNPSGPGFLSNKIAGGATGASKPS 427
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 143/278 (51%), Gaps = 57/278 (20%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYH--------------------------------- 40
+RV+ VDDD CL ++ +L+ +Y
Sbjct: 20 AIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSS 79
Query: 41 VTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPK 100
V + A AL LR N F LV++DVHMP MDGF+ + V E +LPV+M+S +
Sbjct: 80 VVSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKES 139
Query: 101 LVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGM 160
+++G+ GA Y++KPV ++LK++WQ+ + +K G
Sbjct: 140 SILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPRK-------------------GSVSVX 180
Query: 161 GNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG 220
QN + +KK+ + +E +E ++ + +K +VVW+ LH F+ A+ ++G
Sbjct: 181 HEEMQNKRDSKKKAGKKVNEGNEQEKSE-----AIVPRKSKVVWTTALHNDFLEAIRKIG 235
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
+++AVPK+IL+ MN LTRENVASHLQKYR++LKR++
Sbjct: 236 LERAVPKRILEHMNEPGLTRENVASHLQKYRIFLKRVT 273
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 125/188 (66%), Gaps = 23/188 (12%)
Query: 101 LVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKI--------DAKDQNNSDNQDKPHN 152
+VMKG+THGACDYL+KPVR+E LKNIWQHV+R+KK + S+ Q KP +
Sbjct: 2 VVMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKKYEWKEKEQEQSGSVEESERQPKPED 61
Query: 153 GSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKF 212
D + N+ ++ + +DD++ +D +T KKPRVVWSVELH++F
Sbjct: 62 ----------LDYSSSANEGNNWKSSKKRKDDDDEGDERDDTSTLKKPRVVWSVELHQQF 111
Query: 213 VAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVA--A 270
V AVNQLGIDKAVPKKIL+LM++ LTRENVASHLQKYRLYLKR+S Q N +
Sbjct: 112 VTAVNQLGIDKAVPKKILELMSIPGLTRENVASHLQKYRLYLKRLS---GQHHNGLGNPF 168
Query: 271 LGSSDPSY 278
+G +DPS+
Sbjct: 169 MGPTDPSF 176
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 117/170 (68%), Gaps = 10/170 (5%)
Query: 92 MLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAK----DQNNSDNQ 147
+LS N + + +MKGI HGACDY++KPVR+E+L+ IW HVV+ + D + D + D+
Sbjct: 15 VLSANSETRTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVKNSRTDPRTSIIDSGSDDDV 74
Query: 148 DKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVE 207
K +G G G D+ G +K+K +++ D H+ E+ + QKKPRV W +
Sbjct: 75 QKLPSGDG-----GEGDKVGANRRKKKCSKKNKPAVDVAGGHS-ENTSAQKKPRVQWCGQ 128
Query: 208 LHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
LHRKFV AV+Q+GIDKAVPKKIL+ MNVE +TRENVASHLQKYR+YL+++
Sbjct: 129 LHRKFVEAVHQIGIDKAVPKKILEAMNVEGITRENVASHLQKYRIYLRKL 178
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 148/262 (56%), Gaps = 29/262 (11%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VD DPT L+ + +LR Y V T + AL ++ E K++ DLV++++HMPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 77 KLLELVGLEMDLPVI----MLSGNGDPKL--------VMKGITHGACDYLLKPVRIEELK 124
+LL+ + LPV+ L GNG+P + +++ + GA Y+ KPV + +K
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ----------NGKLNKKRK 174
N+WQ+V ++ + Q G Q E +G ++ NGK +
Sbjct: 143 NLWQYVFLNRR-------DKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGYQEP 195
Query: 175 DQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
+ E D+DD+D+ + +KK ++ W+ ELH KF+ A+ +LG+D A PKKIL LM
Sbjct: 196 TTDTVETDKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHLMG 255
Query: 235 VEKLTRENVASHLQKYRLYLKR 256
VE LT+E+++SHLQKYRL +KR
Sbjct: 256 VEGLTKEHISSHLQKYRLSVKR 277
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 77/119 (64%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VD DPTCL+++ +LR Y V T +A+ AL + E DLV++++HMPDM G
Sbjct: 523 VLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAMTLEGGCGVDLVMTELHMPDMYGL 582
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
LL+ + LPV+++S + + +++K + GA YL+KPV +E++ N WQ+V +R++
Sbjct: 583 DLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMEDVTNFWQYVFKRRR 641
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 48/313 (15%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y V+ + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ + ++DLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 130 VVRRKKIDAKD-----------------QNN---SDNQDKPHNGSGQAEGMGNSDQNGKL 169
+VR++ I D Q++ +D D+ H S G GN QN +
Sbjct: 149 IVRKRLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITING-GNGIQNMEK 207
Query: 170 NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKK 228
+ +K +KPR+ W+ ELH+KF+ A+ + GI+KA PK
Sbjct: 208 KQGKKP----------------------RKPRMTWTEELHQKFLEAIEIIGGIEKANPKV 245
Query: 229 ILDL---MNVEKLTRENVASHLQKYRLYLKRISCVANQQAN-MVAALGSSDPSYLRMSSV 284
+++ M +E +TR NVASHLQK+R+ L+ Q N A G+ PS +V
Sbjct: 246 LVECLQEMRIEGITRSNVASHLQKHRINLEENQIPQQTQGNGWATAYGTLAPSLQGSDNV 305
Query: 285 NGLGNYHTVGGPG 297
N + + GP
Sbjct: 306 NTTIPSYLMNGPA 318
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 152/282 (53%), Gaps = 21/282 (7%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL V D L + L+ + Y VT A+ L +NK++ DLVI D HMPD++G
Sbjct: 42 RVLLVGADSNSSL--KNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
L ++G +MDLPV+++S + VM+ I +GACD+L+KPV E + +W+HV R++
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 136 IDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPT 195
+ DKP SG E + D+ L + ++ +E ++ D + PT
Sbjct: 160 -------SKSGLDKP-GESGTVE--SDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPT 209
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLM----NVEKLTRENVASHLQKY 250
KKPR+ W+ ELH KF AV ++G ++KA PK IL M NV+ LTR NVASHLQKY
Sbjct: 210 --KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKY 267
Query: 251 RLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHT 292
R K+ Q + V G++ P +S L ++ T
Sbjct: 268 RQSSKKTCTPQEPQEDFV--WGNAGPDVTLAASKTLLSSHAT 307
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 126/219 (57%), Gaps = 24/219 (10%)
Query: 51 LKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGA 110
+ + N DL+ISDV P D +L+ V + D+P +++S NGD +VMK IT GA
Sbjct: 1 MSFIYGNIQIVDLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGA 60
Query: 111 CDYLLKPVRIEELKNIWQHVVRRKKI-DAKDQNNS----DNQDKP------HNGSGQAEG 159
D+L+KPVRIE LKNIWQHV R++ I + + +NS D P + + G
Sbjct: 61 SDFLIKPVRIEVLKNIWQHVFRKQLIGENRSCSNSAQHLDQVSYPPTIAPASTCATRTTG 120
Query: 160 MGNSDQNGKL-NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQ 218
+ L + R+ N D D +K R+ W+ +LHR+F+AAVN
Sbjct: 121 IITEAATATLESATRETTNGTVTDIQD-----------LRKSRLSWTTQLHRQFIAAVNS 169
Query: 219 LGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
LG +KAVPKKIL+ M V+ LTRE VASHLQKYRL+L+++
Sbjct: 170 LG-EKAVPKKILETMKVKHLTREQVASHLQKYRLHLRKL 207
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 126/197 (63%), Gaps = 16/197 (8%)
Query: 191 HEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKY 250
H+D + KKPRVVWSVELHRKFVAAVNQLGIDKAVPK+IL+LMNVEKLTRENVASHLQKY
Sbjct: 23 HDDASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKY 82
Query: 251 RLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPAS 310
RLYL+R+S VA+QQA++ AA G DP +L M + GL +YH P +++ SF
Sbjct: 83 RLYLRRLSAVASQQASIAAAFGGRDP-FLHMGAFEGLHSYHQPFAP----SASLPSFNPH 137
Query: 311 GMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDN-----TTNDQGKFHPALLPGSHSGNIL 365
G+L +A A G+ L S P +S N D KFH L + ++
Sbjct: 138 GLLSGASA-AAFGIQDLAS----PKASQCSSSNGAGSHCAGDTNKFHIVSLQDNQQADLS 192
Query: 366 QGMPTSLELDQLQLNKN 382
QG+ T+ L Q QL +N
Sbjct: 193 QGL-TASSLVQPQLQQN 208
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 131/263 (49%), Gaps = 69/263 (26%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQY-----------------HVTTTSQAITALKLL 54
P G+RVL +D+ T L ++ LL C Y VT + A A++ L
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEEL 81
Query: 55 RENKNKFDLVISDVHMP-DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDY 113
EN +D+V+++VH P +DGF LL+ G +MDLPV++ S + D + V+K + GACDY
Sbjct: 82 HENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDY 141
Query: 114 LLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKR 173
L+KP+R EELKNIWQHV RRK +G +A GNS +
Sbjct: 142 LVKPLRHEELKNIWQHVYRRKL---------------RSGGRRAAAAGNSSKG------- 179
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM 233
+ K R W ELH +FV+ V QLG+DKA P +IL L+
Sbjct: 180 -----------------------EIKKRFRWPKELHERFVSVVLQLGVDKATPNQILPLL 216
Query: 234 NVEKLTRENVASHLQKYRLYLKR 256
N E LTR+ Q++R+ L +
Sbjct: 217 NREDLTRD------QRFRIALTK 233
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 138/247 (55%), Gaps = 19/247 (7%)
Query: 51 LKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGA 110
+ L +NK++ DLVI D HMPD++G L ++G +MDLPV+++S + VM+ I +GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 111 CDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
CD+L+KPV E + +W+HV R++ + DKP SG E + D+ L
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKRM-------SKSGLDKP-GESGTVE--SDPDEYDDLE 110
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKI 229
+ ++ +E ++ D + PT KKPR+ W+ ELH KF AV ++G ++KA PK I
Sbjct: 111 QDNLYESNEEGSKNTCDHKEEKSPT--KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTI 168
Query: 230 LDLM----NVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVN 285
L M NV+ LTR NVASHLQKYR K+ Q + V G++ P +S
Sbjct: 169 LKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFV--WGNAGPDVTLAASKT 226
Query: 286 GLGNYHT 292
L ++ T
Sbjct: 227 LLSSHAT 233
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 118/196 (60%), Gaps = 15/196 (7%)
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP+MDGF+ LV E LPV+M+S + +++G+ GA Y++KPV ++LKN+WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 130 VVRRKKIDA--------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDED 181
V KK + + Q S + +N + E + N +++ K + KRK + +
Sbjct: 61 AVGPKKGKSHIVMQEIERTQGASQLEKTSNN---EVESLMNEEKHNKRDSKRKTLKKANE 117
Query: 182 DEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 241
E + KK +V+W+ LH +F+ A ++G+++AVPK+IL++MNV LTRE
Sbjct: 118 GNGKEKS----ETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRE 173
Query: 242 NVASHLQKYRLYLKRI 257
NVASHLQKYR++LKR+
Sbjct: 174 NVASHLQKYRIFLKRV 189
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 127/225 (56%), Gaps = 24/225 (10%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D FP+GLRV+ VDDDPT L +LE +L+RC VTT A L LLREN+ +D+VISDV
Sbjct: 11 DAFPAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDV 70
Query: 69 HMPDMDGFKLLELVG----LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
MP MD F L +G E ++S +G+ VM+GI GAC+YLLKP+R++EL+
Sbjct: 71 IMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEYLLKPIRMKELR 130
Query: 125 NIWQHVVRR---KKIDAKDQNNSDNQDKPHNGSGQAEG----MGNSDQNGKLNKKRKDQN 177
NI QHV RR K+ID + + NG ++ G G + + K+ K+ ++++
Sbjct: 131 NICQHVFRRKIQKEIDIESIEGTIQVQMAINGLDKSNGGHLLCGENLTSVKIGKEVQNKH 190
Query: 178 EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID 222
DD + KK V++ H+KF AVNQ+G D
Sbjct: 191 ---------DDKGPGGNFSTKKSAVIF----HQKFDKAVNQIGPD 222
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 30/227 (13%)
Query: 38 QYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNG 97
Q V T A AL L+EN+ FDLVI++ H+ M+G + + + + +P+IM+S +
Sbjct: 14 QTIVVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDN 73
Query: 98 DPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK----IDAKDQNNSDNQ--DKPH 151
P L+ K + +GA Y++KP E+ K+IW++V+ KK I++ N + + +P
Sbjct: 74 RPSLISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGKKEKLFIESLFVRNEEEETSSEPK 133
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRK 211
N + Q K D KK ++VW+ LH+
Sbjct: 134 NKKKHCKRKSKESQGEK------------------------DIQVVKKQKLVWTPYLHKM 169
Query: 212 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
F+ AVNQ+G++KAVPKKIL++MN+ LTRENVASHLQKYR++L+ ++
Sbjct: 170 FLLAVNQIGLEKAVPKKILEIMNIPNLTRENVASHLQKYRIFLRDVA 216
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 134/262 (51%), Gaps = 30/262 (11%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISD 67
G+ FP+ ++VL +D D L +E L + Y VTT +A+ L+ + K FDLV+ +
Sbjct: 6 GNVFPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLE 64
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIM-LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
MPDMD F L+ + ++D+PVIM + G ++ I +GACD +KP ++K +
Sbjct: 65 TQMPDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYM 124
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED-- 184
W H VR+ K Q + E +G G + R D N +DED
Sbjct: 125 WHHAVRKMMKGNKKQKIN-------------EQLG---VEGSQIRARDDSNLCLNDEDIP 168
Query: 185 ----DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL------GIDKAVPKKILDLMN 234
+ + KK RVVWS+ELH +F+ AV +L KAVPK IL+ M
Sbjct: 169 EPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKAVPKTILEHMK 228
Query: 235 VEKLTRENVASHLQKYRLYLKR 256
V LTRE V SHLQKYRLYL +
Sbjct: 229 VPGLTREQVGSHLQKYRLYLNK 250
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 105/157 (66%), Gaps = 8/157 (5%)
Query: 100 KLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG 159
+ + K I HGAC Y++KPVR E +KNIW HVVR+ K + +++ N+ N N S +
Sbjct: 2 ETMAKAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVNNRND----NPSQIGQP 57
Query: 160 MGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL 219
+ + + K +K +N + D ++D E +TQKK RV W+ +LH KF+ A+N +
Sbjct: 58 VDDEKDDAKHTRKHCKKNRKDGDGSEKD----EVISTQKKQRVEWTRQLHSKFLEAINHI 113
Query: 220 GIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
G+D AVPKKIL++MNV+ +T+ENVASHLQK+R+YLK+
Sbjct: 114 GMDNAVPKKILEVMNVDGITKENVASHLQKFRMYLKK 150
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 176/404 (43%), Gaps = 74/404 (18%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +++D +++ L Y V+ AL + + F + I +V
Sbjct: 14 FPKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESFHVAIVEVST 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ +G FK LE DLP IM S +MK I GA ++L KP+ E+L+NIWQH
Sbjct: 74 SNSNGNFKFLETAK---DLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSG--------QAEGMGNSDQNGKLNKKRKDQNEDED 181
VV K +A SD+ KP N SG + E N + N +NE E
Sbjct: 131 VVH-KAFNAGGNVVSDSL-KPVNDSGASIPQLKVETEERKNKNLERTENVSPAHENEYEQ 188
Query: 182 D---------------EDDEDDHNHEDP-------------TTQKKPRVVWSVELHRKFV 213
+ D + E+P +KK +V W+ ELH+KFV
Sbjct: 189 SPLSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYGTKVNRKKMKVDWTPELHKKFV 248
Query: 214 AAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVAN-----QQANMV 268
AV QLG+D+A+P +IL++M VE LTR NVASHLQK+R++ + I N QQ + +
Sbjct: 249 QAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHILPKENDRRWSQQRDQI 308
Query: 269 AALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNA-PAGLGMHGL 327
+Y V YHT N TF P M G + PAG+ M
Sbjct: 309 QR------NYYAHKPVMAYPPYHT--------NHTFPMSPVYPMWGATGSHPAGVPMWAS 354
Query: 328 PSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTS 371
P G P ++ +H PG H+ G P +
Sbjct: 355 P--GYPPWVPTES----------WHWKPYPGMHAHADAWGCPVA 386
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D +K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLRKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D +K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 107/179 (59%), Gaps = 4/179 (2%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR-ISCVANQQANM 267
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+ I + Q A +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKQGATL 179
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSMLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKA+PKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEIMDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRVQLKK 167
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R + D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D ++ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R + D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N + D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGQITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN+LG DKAVPKK+L +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN L DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M + LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASHLQKYRMQLKK 167
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ + N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNSMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ +++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S + + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILSMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL ++ V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEE NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILATARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTAQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIE L NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPV IEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKA PKK+L +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASHLQKYRMQLKK 167
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 170/394 (43%), Gaps = 70/394 (17%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL+VL ++ D + L Y+V+T + AL + F + I +V
Sbjct: 14 FPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESFHIAIVEVSS 73
Query: 71 PD-MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK LE DLP IM S N +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SSGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 130 VVRR-----------------KKIDAKDQNNSDNQDKPHNGSGQAEGM------------ 160
VV + + + + Q +D++ S E +
Sbjct: 131 VVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRFVDNDHELSS 190
Query: 161 GNSDQNGKLNKKRKDQNEDEDDEDDEDDHN--------HEDPT----TQKKPRVVWSVEL 208
GN + + DD D ++ N H D QKK +V W+ EL
Sbjct: 191 GNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSDSCEIRGNQKKIKVDWTPEL 250
Query: 209 HRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMV 268
H+ FV AV QLGID+A+P +IL+LM VE LTR NVASHLQKYR++ ++I ++
Sbjct: 251 HKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILPKEERK---- 306
Query: 269 AALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAP-AGLGMHGL 327
L + SY + YH+ N T P M G+ +P AG+ + G
Sbjct: 307 -WLNLRERSYCVKRPIMAFPPYHS--------NHTLPLPPVYPMWGQSGSPTAGMQIWGS 357
Query: 328 PSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
P P H TT + + P PG H+
Sbjct: 358 PG---YPFWH------TTAENWHWKP--FPGMHA 380
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN L DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN L DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 38/278 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQY--------HVTTTSQAITALKLLRENKNKFDLVIS 66
+ V+ VDDD L +L +L R +Y V AL L+ ++ DL+I+
Sbjct: 16 INVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLIIT 75
Query: 67 DVHMPDMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
D +MP M+G +L + + E +LPV+++S DP + ++ GA ++ KP+ +L
Sbjct: 76 DYYMPSMNGLQLKKQITQEFGNLPVLVMSS--DPNKEQESLSCGAMGFIPKPIEPADLTK 133
Query: 126 IWQHVVRRK---------KIDAKDQNNSDNQD-------------KPHNGSGQAEGMGNS 163
I+Q + K + + KD N S Q K N S +++ +
Sbjct: 134 IYQFALTYKMNGKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSDSRTVN 193
Query: 164 DQNGKL---NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG 220
NG + RK++ + +D + P KK ++ W+ LH F+ A+ +G
Sbjct: 194 STNGSCVSTDGSRKNRKRKPNGGPSDDGESLLQPA--KKKKITWTDSLHDLFLQAIRHIG 251
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
+DKAVPKKIL MNV LTRENVASHLQKYR++L+R++
Sbjct: 252 LDKAVPKKILAFMNVSYLTRENVASHLQKYRIFLRRVA 289
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NI QH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 102/170 (60%), Gaps = 6/170 (3%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ---KYRLYLKR 256
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ KYR+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQVHIKYRMQLKK 170
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein
[Zea mays]
Length = 114
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
M G FP G++VL VDDDPTCL++L+ +L C+Y VTT QA AL +LREN+
Sbjct: 1 MAAAEARGADFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRG 60
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMDLPVI 91
FD++ISDVHMPDMDGF+LLELVGLEMDLPVI
Sbjct: 61 FDVIISDVHMPDMDGFRLLELVGLEMDLPVI 91
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 142/270 (52%), Gaps = 30/270 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ V+ VDDD L ++ +L+ +Y V AL L+ ++ DL+I+D +MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 75 GFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G +L + + E +LPV+++S + + + + ++ GA ++ KP+ +L I+Q +
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSDTNKE--EESLSCGAMGFIPKPIHPTDLTKIYQFALSN 133
Query: 134 KK----IDAKDQNNSDN------------------QDKPHNGSGQAEGMGNSDQNGKL-- 169
K+ + +QN+ D + K N S +++ + NG
Sbjct: 134 KRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVS 193
Query: 170 -NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
+ RK++ + +D + P KK ++ W+ LH F+ A+ +G+DKAVPKK
Sbjct: 194 TDGSRKNRKRKPNGGPSDDGESMSQPA--KKKKIQWTDSLHDLFLQAIRHIGLDKAVPKK 251
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
IL M+V LTRENVASHLQKYR++L+R++
Sbjct: 252 ILAFMSVPYLTRENVASHLQKYRIFLRRVA 281
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D +K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLRKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P G+RVL +D+ T L ++ LL C Y VT + A A++ L EN +D+V+++VH P
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLTEVHAP 81
Query: 72 -DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+DGF LL+ G +MDLPV++ S + D + V+K + GACDYL+KP+R EELKNIWQHV
Sbjct: 82 AGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHV 141
Query: 131 VRR 133
RR
Sbjct: 142 YRR 144
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D +K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 49/247 (19%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ +L V+DD T L ++ LL++C Y V T I AL LR + FDLV++DVH D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN---IWQHVV 131
GF+L +++ ++PV+++S + ++KG LK V +++ ++ V
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKG---------LKGVSVDDQRDQGPCTALQV 125
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNH 191
+R K KP G KL K+ KD + N
Sbjct: 126 KRGK-------------KPVPGKSAM----------KLGKQGKDNSV-----------NF 151
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
PT K +++W+ LH F+ A++ +G DKAVPKKI + M V L+RENVASH QKYR
Sbjct: 152 VLPT---KSQIIWTDSLHNTFLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASHWQKYR 208
Query: 252 LYLKRIS 258
+YL+R++
Sbjct: 209 IYLRRVT 215
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N + D +K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGKITDIRDLRKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + D ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLSPLENEVRYDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + D ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRYDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 146/281 (51%), Gaps = 44/281 (15%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH-----------VTTTSQAITALKLLRENKNKFDL 63
+ V+ VDDD L ++ +L+ +Y V +A++ LK+ R+N DL
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDN---IDL 72
Query: 64 VISDVHMPDMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+I+D +MP M+G +L + + E +LPV+++S + + + + ++ GA ++ KP+ +
Sbjct: 73 IITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKE--EESLSCGAMGFIPKPIHPTD 130
Query: 123 LKNIWQHVVRRKK----IDAKDQNNSDN------------------QDKPHNGSGQAEGM 160
L I+Q + K+ + +QN+ D + K N S +++
Sbjct: 131 LTKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSR 190
Query: 161 GNSDQNGKL---NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVN 217
+ NG + RK++ + +D + P KK ++ W+ LH F+ A+
Sbjct: 191 TVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMSQPA--KKKKIQWTDSLHDLFLQAIR 248
Query: 218 QLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
+G+DKAVPKKIL M+V LTRENVASHLQKYR++L+R++
Sbjct: 249 HIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVA 289
>gi|345286271|gb|AEN79458.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN L DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV--HMP 71
GL+VLAVDDDP L L LRRC Y VT ALK L +N + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
MDGF LL +G + VI+ SG + +G GAC KP+R ++ IWQHV+
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNH 191
R ++ +A ++ +P + G E +KR D D
Sbjct: 139 RWRRENAAGVVAANANPRPSSEGGHLE---------DTPRKRGRGVNDSGKGKGASDGGG 189
Query: 192 EDPTTQ--KKPRVVWSVELHRKFVAAVNQL---GIDKAVPKKILDLMNVE--KLTRENVA 244
P T KK + W+ E+H FV+AV QL G D P I + + V+ LT V+
Sbjct: 190 VQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGD--TPNNIREFLEVDGIYLTTTQVS 247
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGL 287
SHLQKYR C Q+ M SS PS+ +S N L
Sbjct: 248 SHLQKYRR-----DCRTGGQSTMP----SSRPSHSNSTSKNYL 281
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 126/251 (50%), Gaps = 57/251 (22%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
++ FP GL V+A+D D T L +E + RC Y VT + A AL LL E K+ FD+++
Sbjct: 5 IDNPSFPDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVML 63
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
D HMP+MD + ++ ++++PVI S V K IT+GAC+Y KP+ E+ K
Sbjct: 64 IDAHMPNMDAYDFVQHATGQLNIPVISNS-------VTKSITYGACEYWTKPLYEEQFKI 116
Query: 126 IWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
+WQHV R+ ++K H + +G+ D G ++R D N
Sbjct: 117 MWQHVARK----------GLRENKKH------KSVGSLDVQGHRKRERDDDNV------- 153
Query: 186 EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 245
P KKPR++ +F KA PK IL +++ L+ +VAS
Sbjct: 154 --------PNV-KKPRLM-------QF----------KAKPKVILKRIDIHGLSAGHVAS 187
Query: 246 HLQKYRLYLKR 256
HLQKYR YLKR
Sbjct: 188 HLQKYRNYLKR 198
>gi|345286267|gb|AEN79456.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 93 LSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP-H 151
++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE--DPTTQKKPRVVWSVELH 209
S A + + + DD ++N E D K R+ W+ +LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 210 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
R+F+AAVN LG DKAVPK IL +M V+ LTRE VA HLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKNILGIMKVKHLTREQVACHLQ 159
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTT---TSQAITALKLLRENKNKFDLVI 65
DQFP G+RVLAVDDDPTCL +LE LL RCQYH T+ +LLRE K++FD VI
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVI 91
S+VHMPDMDGFKLLELVGLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 34/199 (17%)
Query: 57 NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLK 116
K FD+++ D MP+MD ++ V L++ +P IM++ + +MK I GAC+Y K
Sbjct: 35 KKCCFDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTK 94
Query: 117 PVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQ 176
P+ ++ K +WQHV R+ +N++ GS + N+KR +
Sbjct: 95 PLIEKKFKTMWQHVARK--------GMPENKEYAIVGSSMVQA----------NRKRGRE 136
Query: 177 NEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
+ D E T K R WS ELH++F+ AVNQLG+DKA PKKI +M+V
Sbjct: 137 DADASKE-----------THAKTARFSWSPELHQRFLWAVNQLGLDKATPKKIQKIMDVP 185
Query: 237 KLTRENVASHLQKYRLYLK 255
+T+E+V KYR Y+K
Sbjct: 186 NMTKEHV-----KYRNYIK 199
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTT---TSQAITALKLLRENKNKFDLVI 65
DQFP G+RVLAVDDDPTCL +LE LL RCQYH T+ +LLRE K++FD VI
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVI 91
S+VHMPDMDGFKLLELVGLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHMP 71
+ V+ VDD+ L + +L + +Y V AL L+ ++ DL+I+D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 72 DMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
M+G +L + + E +L V+++S DP + ++ GA ++ KP+ +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSS--DPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKD--------------- 175
+ K+ + K +++ K N S + M +Q L K+K+
Sbjct: 134 LTYKR-NGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNV 192
Query: 176 ---------QNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVP 226
+N + D KK ++ W+ L F+ A+ +G DK VP
Sbjct: 193 SHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKKKIWWTNPLQDLFLQAIQHIGYDKVVP 252
Query: 227 KKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KKIL +MNV LTRENVASHLQKYRL++KR+
Sbjct: 253 KKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 43/277 (15%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHMP 71
+ V+ VDD+ L + +L + +Y V AL L+ ++ DL+I+D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 72 DMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
M+G +L + + E +L V+++S DP + ++ GA ++ KP+ +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSS--DPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 131 VRRKK---------IDAKDQNNSDNQD-------------KPHNGSGQAE-------GMG 161
+ K+ + KD N S Q K N S +++ +
Sbjct: 134 LTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVS 193
Query: 162 NSDQNG-KLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG 220
+ NG + N+KRK + DD + + P KK ++ W+ L F+ A+ +G
Sbjct: 194 HVSTNGSRKNRKRKPKGGPSDDGESLS----QPP---KKKKIWWTNPLQDLFLQAIQHIG 246
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
DK VPKKIL +MNV LTRENVASHLQKYRL++KR+
Sbjct: 247 YDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 82/124 (66%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y VT + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ +G +MDLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQH 148
Query: 130 VVRR 133
+VR+
Sbjct: 149 IVRK 152
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDL---MNVEKLTRENVASHLQKYRLY 253
+KPR+ W+ +LH+KF+ A+ +G I+KA PK +LD M VE +TR NVASHLQK+R+
Sbjct: 333 RKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGITRSNVASHLQKHRIN 392
Query: 254 LKR 256
L+
Sbjct: 393 LEE 395
>gi|255570679|ref|XP_002526294.1| hypothetical protein RCOM_0577360 [Ricinus communis]
gi|223534375|gb|EEF36083.1| hypothetical protein RCOM_0577360 [Ricinus communis]
Length = 549
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 63/266 (23%)
Query: 53 LLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACD 112
+++E K +F L +++ +MPDMD +LL + L+ D+PVI++S K I GA
Sbjct: 1 MVQEQKGRFKLAMANANMPDMDSLELLHAL-LDKDIPVILISSETSVFAARKAIAEGASF 59
Query: 113 YLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSG----------------Q 156
L +P+ I++L+ +WQH R ++ +A DQ ++ + NGS +
Sbjct: 60 ILHEPISIDDLRYVWQHAYRNRR-NAADQTQNETCQEKENGSNISQYPVIQETTENACKE 118
Query: 157 AEGMGNSDQNGKL---------------------NKKR-----KDQNEDEDDEDDE---- 186
E GN+ + L N+K+ K +NE +E E
Sbjct: 119 DEVEGNAKETYALIEKDCSKTLENTITEHSMTDSNEKQGVEKIKRRNEVRHEEQREKRVK 178
Query: 187 ---DDHNHE------------DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD 231
++ NH+ ++ ++ RV+W+ ELH KF AA++ LG KA PK IL+
Sbjct: 179 IIFEEENHKWKKTIIEEEIEEKSSSDRRSRVLWTPELHLKFTAAISALGDKKARPKPILE 238
Query: 232 LMNVEKLTRENVASHLQKYRLYLKRI 257
+MNV LT+ VASHLQKY+ ++RI
Sbjct: 239 MMNVPHLTQRQVASHLQKYKSQVRRI 264
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 84/131 (64%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y V+ + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ + ++DLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 130 VVRRKKIDAKD 140
+VR++ I D
Sbjct: 149 IVRKRLIFKPD 159
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
+KPR+ W+ ELH+KF+ A+ +G + V + L M +E +TR NVASHLQK+R+ L+
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEEN 478
Query: 258 SCVANQQAN-MVAALGSSDPSYLRMSSVNGLGNYHTVGGPG 297
Q N A G+ PS +VN + + GP
Sbjct: 479 QIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPA 519
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 84/131 (64%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y V+ + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ + ++DLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 130 VVRRKKIDAKD 140
+VR++ I D
Sbjct: 149 IVRKRLIFKPD 159
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 198 KKPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDL---MNVEKLTRENVASHLQ----- 248
+KPR+ W+ ELH+KF+ A+ + GI+KA PK +++ M +E +TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQVKKKT 478
Query: 249 -----KYRLYLKRISCVANQQAN-MVAALGSSDPSYLRMSSVNGLGNYHTVGGPG 297
K+R+ L+ Q N A G+ PS +VN + + GP
Sbjct: 479 HTLNIKHRINLEENQIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPA 533
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 84/131 (64%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y V+ + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ + ++DLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 130 VVRRKKIDAKD 140
+VR++ I D
Sbjct: 149 IVRKRLIFKPD 159
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDL---MNVEKLTRENVASHLQKYRLY 253
+KPR+ W+ ELH+KF+ A+ +G I+KA PK +++ M +E +TR NVASHLQK+R+
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 254 LKRISCVANQQAN-MVAALGSSDPSYLRMSSVNGLGNYHTVGGPG 297
L+ Q N A G+ PS +VN + + GP
Sbjct: 479 LEENQIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPA 523
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 88/135 (65%), Gaps = 7/135 (5%)
Query: 6 VNGDQFPSGLRV--LAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
VN ++F G+RV L V+ D + ++ LLR+C Y V++ S + A K L+E+ N DL
Sbjct: 20 VNWEKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDL 79
Query: 64 VISDVHMPDMDGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVR 119
V+++V +P++ G+ LL ++ +E D +PVIM+S K+V + + GA D+L+KP+R
Sbjct: 80 VLTEVELPNVSGYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIR 138
Query: 120 IEELKNIWQHVVRRK 134
EL+N+WQHV RR+
Sbjct: 139 KNELRNLWQHVWRRQ 153
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C YHV S + A ++L+E DLV+++V +P M
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E + +PVIM+S N +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 99 GFLLLSTI-MEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 157
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ-NGKLNKKRKDQNEDEDD 182
R++ + ++ +DK GQ G+ ++ + KRK+ +E E D
Sbjct: 158 WRKQLSNGGLVQHTQQEDKLTEWQGQKTGVTKAEHLIENVAHKRKECSEQESD 210
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A ++L+E + DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL LV +E + +PVIM+S K+V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 131 VRR 133
RR
Sbjct: 156 WRR 158
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 15/145 (10%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LR+L V+ D + ++ LLR+C Y V S + A + L+ + DLV+++V +P +
Sbjct: 38 ALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPSI 97
Query: 74 DGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GF LL L+ +E D +PVIM+S N V+K + GA D+L+KPVR EL+N+WQH
Sbjct: 98 SGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQH 156
Query: 130 VVRR----------KKIDAKDQNNS 144
V RR +KI+A +NN+
Sbjct: 157 VWRRQTLTGGGYVCQKIEASSENNA 181
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D ++ LLR+C YHV + I A ++ E FD+++S+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 75 GFKLL-ELVGLEMD--LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++G E+ +PVIM+S +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
RR N ++N D N +E M N++ G K K +E DD DD+
Sbjct: 193 RR-HCSIPYANGTENGD---NTQSASENMSNNNGAGNDVKDTK-MDEGCDDNDDQ 242
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 109 bits (273), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKN---KFDLVISD 67
FP+GLRVL VDDD CL +LE L+ C Y+V + A TAL++LRE K+ +FDLVISD
Sbjct: 6 FPAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDLVISD 65
Query: 68 VHMPDMDGFKLLELVGLEMDLPVI 91
V MP+MDGF+LLEL+G+EMDLPVI
Sbjct: 66 VVMPNMDGFELLELIGVEMDLPVI 89
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A ++L+E + DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL LV +E + +PVIM+S K+V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 131 VRR 133
RR
Sbjct: 156 WRR 158
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C YHV + + I A +++E FD+++S+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++G E+ +PVIM+S +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDE 186
RR + N ++N N +E M N++ G K + E DD DD+
Sbjct: 177 RR-HCSTRYPNGAENGA---NNPSASENMSNNNGAGNEMKDSR-MAEGCDDNDDQ 226
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A ++L+E DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 75 GFKLLELV-GLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
GF LL L+ G E ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 132 RRKK-------IDAKDQNNSDNQDKPHNGSGQAEGMGNSDQN 166
RR+ I K + S+N+ ++ +G G+ +++N
Sbjct: 181 RRQASSNVRADIQEKVEVTSENETASNHSTGYVAGVQRNNKN 222
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A ++L+E DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 75 GFKLLELV-GLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
GF LL L+ G E ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 132 RRKK-------IDAKDQNNSDNQDKPHNGSGQAEGMGNSDQN 166
RR+ I K + S+N+ ++ +G G+ +++N
Sbjct: 181 RRQASSNVRADIQEKVEVTSENETASNHSTGYVAGVQRNNKN 222
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 11/166 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A + L+E + DL+++++ +P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 75 GFKLLELVGLE----MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL LV +E ++PVIM+S LV+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQ 176
RR + D + H+ G + + ++D+ ++ DQ
Sbjct: 160 WRRHSL------RDDPTARAHSLPGSQQNLEDTDETCADSRYHSDQ 199
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 121 EELKNIWQHVVRRKKIDA-KDQNNSDNQDKPHNGSGQAEGMGNSDQN-GKLNKKRKDQNE 178
EEL + Q+++ A K +S + P G G Q G KR + E
Sbjct: 18 EELMPLTQNLITPDLAAAFKIHPSSASASAPTESGSVFPGSGQQQQRPGVEPPKRIELEE 77
Query: 179 DEDDEDDEDDHNHEDPT-TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEK 237
+E ++ E+P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LMNVE
Sbjct: 78 EESSVGGVTENVGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVEG 137
Query: 238 LTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP--------------SYLRMS- 282
LTRENVASHLQKYRLYLKR+ ++++ + L +S P + M
Sbjct: 138 LTRENVASHLQKYRLYLKRMQGLSSEGPSSCDQLFASTPVPPSHFLHRDDMVVPLVPMGM 197
Query: 283 SVNGLGNYHTVGGPGQF 299
V GLG+ H V GP +
Sbjct: 198 GVPGLGHGHMVPGPPHY 214
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 108 bits (271), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
V V DQF +GL+VL VDDD T L +LE +LR YHVTT SQA AL +LRE K+ FD
Sbjct: 28 VNVVVSDQFSTGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFD 84
Query: 63 LVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGAC 111
+V+SD +P M +KLLE VGLE DLP+IM+S +G VM+ +H C
Sbjct: 85 IVLSDARVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMRD-SHSWC 132
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Query: 156 QAEGMGNSDQNGKLNKK-RKDQNEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKF 212
+ E G+ D +G ++K RK +E D +++++DP+ T K+PR+VW+ +LH++F
Sbjct: 152 EPEETGDRDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRF 211
Query: 213 VAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALG 272
V V LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+ ++N+ + L
Sbjct: 212 VDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLF 271
Query: 273 SSDP 276
+S P
Sbjct: 272 ASTP 275
>gi|255635672|gb|ACU18185.1| unknown [Glycine max]
Length = 328
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 153/323 (47%), Gaps = 43/323 (13%)
Query: 368 MPTSLELDQLQLNKNITSISELPNTKD-NTTFHVSSGFPDAR--IGFGRSTNPLLDVNNN 424
M S+ LDQLQ NK + S+ L D TTF +S+ PD R I S P + +NN
Sbjct: 1 MTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPISNKLPDPRPKITNSGSHTPDVSFSNN 60
Query: 425 PLFLEGHPQEAHSNKMFG--NQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFS 482
L LE PQ + + S+ S +S S L D GR +DNW+S VQ S IQ NS+
Sbjct: 61 ALMLEPRPQGTQGSVRIETLSSSVASQHSEFSLSLLDQGRYSDNWASTVQPSVIQTNSYP 120
Query: 483 LGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAV----- 537
+ Q + P DN++++ L GN +S+ LS + D D+ + V
Sbjct: 121 PSECFGQTNIPP---TDNMASVPLQGGN--LSGASITSLSRQSYDSMTDMHSEGVTFTNR 175
Query: 538 -----------------QDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNE 580
QDA SN++ +NS +NG P G + HR+ +
Sbjct: 176 PGHISSNVPYQGWHDNNQDATHHSNIL--SINSLTPVNGAAVPAGHA--AMNSALHRNLD 231
Query: 581 FDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMS 640
F N+ D MK + +A S +G +M K+Q S+ S ++ SLEDL +S
Sbjct: 232 F------NYCDPLQMKHEGFVELTDEALSKQHQGNIMNLPKSQQSHFSNNLGSLEDL-VS 284
Query: 641 SMVKEEQDKVLVPEGNFGCSSYS 663
SM+K+E DK+ + +GN C++YS
Sbjct: 285 SMMKQENDKMKLLDGNLICNNYS 307
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A +++RE FDLV+++V MP +
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLTEVAMPSLS 112
Query: 75 GFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G +LL + + +PVIM+S V+K + GA D+L+KPVR EL N+WQHV
Sbjct: 113 GIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELGNLWQHVW 172
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQN 166
RR ++ + + +N H + A G + N
Sbjct: 173 RRHAMNCQTNGSENNAASNHVSTNVANGSKTGENN 207
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 108 bits (270), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 63/81 (77%)
Query: 23 DPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELV 82
DPT L +LE +L++C Y VT A AL LLRE K+ +D+VISDV+MPDMDGFKLLELV
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 83 GLEMDLPVIMLSGNGDPKLVM 103
GLEMDLPVIM+S +G+ VM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Query: 156 QAEGMGNSDQNGKLNKK-RKDQNEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKF 212
+ E G+ D +G ++K RK +E D +++++DP+ T K+PR+VW+ +LH++F
Sbjct: 101 EPEETGDRDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRF 160
Query: 213 VAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALG 272
V V LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+ ++N+ + L
Sbjct: 161 VDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLF 220
Query: 273 SSDP 276
+S P
Sbjct: 221 ASTP 224
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A ++L+ + DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
GF LL LV + ++PVIM+S +G V K + GA D+L+KPVR ELKN+WQHV
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 132 RRK 134
RR+
Sbjct: 160 RRQ 162
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A ++L+ + DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
GF LL LV + ++PVIM+S +G V K + GA D+L+KPVR ELKN+WQHV
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 132 RRK 134
RR+
Sbjct: 160 RRQ 162
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 11/145 (7%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D ++ LLR+C Y V + + A ++L+ DL++++V +P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL L+ +E D+ PVIM+S V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 131 VRRKKIDAKD------QNNSDNQDK 149
RR+ A Q+ SD Q K
Sbjct: 175 WRRQTQSAATAGINGPQDESDTQQK 199
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+ + VL VDDD C L+ +L++C Y VTT S A+ LL E +F+L+++DV MP
Sbjct: 6 PADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMMP 64
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
D+DG LL V ++PV+M+S N VM I GA DYLLKPV + +K++W
Sbjct: 65 DVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWA 124
Query: 129 HVVRRKK 135
HV RRK+
Sbjct: 125 HVWRRKQ 131
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 41 VTTTSQAITALKLLRENKNKFDLVISDVHMP-DMDGFKLLELVGLEMDLPVIMLSGNGDP 99
VT + A A++ L EN +D+V+++VH P +DGF LL+ G +MDLPV++ S + D
Sbjct: 6 VTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDK 65
Query: 100 KLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ V+K + GACDYL+KP+R EELKNIWQHV RRK
Sbjct: 66 RTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRK 100
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 90 VIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+++ S D +VM+ + +GACDY++KP+ E +K IW+HV+R +
Sbjct: 143 LLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWR 187
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V++ S + A K L+E N DLV+++V +P++
Sbjct: 31 LRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEVELPNVS 90
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL ++ +E + +PVIM+S N K+V + + GA D+L+KP+R EL+N+WQHV
Sbjct: 91 GYALLSMM-MEHETCKSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 131 VRRK 134
RR+
Sbjct: 150 WRRQ 153
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A + L++ N DL++++V +P +
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLIS 100
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL LV +E D +PVIM+S + V+K + GA D+L+KPVR ELKN+WQHV
Sbjct: 101 GYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHV 159
Query: 131 VRRKKIDA 138
RR+ + A
Sbjct: 160 WRRQTLTA 167
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 163 SDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLG 220
S N K + +++ E D +++++DP+ T K+PR+VW+ +LH++FV V LG
Sbjct: 193 SSNNFKSFNEERNREPAEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLG 252
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
I AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+ ++N+ + L +S P
Sbjct: 253 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTP 308
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A +++R FDLV+++V+MP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 75 GFKLL-ELVGLE--MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +V + ++PVIM+S V+K + +GA D+L+KPVR EL+N+WQHV
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 132 RR----KKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ 165
RR +++A + N + N ++G+G G NSD+
Sbjct: 158 RRHSMNSQLNASENNAASNHISVNSGTGSKTG-ENSDE 194
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+ D + ++ LL++C Y V S + A + L+E N+ DL+++++ +P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL LV +E + +PVIM+S +V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 86 GFALLALV-MEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 131 VRR 133
RR
Sbjct: 145 WRR 147
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 5/134 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A + L++ + DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + + +K + GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 131 VRRKKIDAKDQNNS 144
RR I QN +
Sbjct: 148 WRRHAISTPTQNTT 161
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 5/134 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A + L++ + DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + + +K + GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 131 VRRKKIDAKDQNNS 144
RR I QN +
Sbjct: 148 WRRHAISTPTQNTT 161
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D ++ LLR+C Y V + + A ++L+ FDL++++V +P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL L+ +E D +PVIM+S V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 131 VRRK 134
RR+
Sbjct: 164 WRRQ 167
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 21/152 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH-VTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V T S + A ++L+E + DL++++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 74 DGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL L+ + ++PVIM+S K V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 125 SGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQHV 184
Query: 131 VRRK-----------------KIDAKDQNNSD 145
R++ K +A +NN+D
Sbjct: 185 WRKQSSLGGGNGPHDESVGQDKTEATSENNAD 216
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D ++ LLR+C Y V + + A ++L+ FDL++++V +P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ LL L+ +E D +PVIM+S V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 131 VRRK 134
RR+
Sbjct: 139 WRRQ 142
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 105 bits (262), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 59/64 (92%)
Query: 195 TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYL 254
T QKKPRV+W+ ELH KF+AAV+ LG+++AVPKKILDLMNV+KLTRENVASHLQK+R+ L
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVAL 60
Query: 255 KRIS 258
K++S
Sbjct: 61 KKVS 64
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
E EDDH H K+PR+VW+ LH++FV AV+ LGI AVPK I+ LMNVE LTREN
Sbjct: 231 EGSEDDHAH----ALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTREN 286
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYLKR+
Sbjct: 287 VASHLQKYRLYLKRL 301
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
KK+K E +E D ED + T K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 101 KKQKKSGGGEAAVAEEGDSGTEDASGRTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKT 160
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQ 264
I+ LMNVE LTRENVASHLQKYRLYLKRI + ++
Sbjct: 161 IMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEE 196
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 7/152 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A ++RE FDLV+++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 75 GFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G +LL + ++PVIM+S V++ + GA D+L+KPVR EL+N+WQHV
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 132 RR----KKIDAKDQNNSDNQDKPHNGSGQAEG 159
RR + +A + N + N + G+G G
Sbjct: 164 RRHAMNSQTNASENNAASNHLSANGGNGSKTG 195
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V + A ++L+ DL++++V +P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 74 DGFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+ LL L+ +E D+ PVIM+S V K + GA DYL+KP+R EL+N+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 130 VVRRKKIDAKDQ---NNSDNQDKPHNGSGQAEGMGNSDQNGK 168
V RR+ A D N S Q K AEG ++ NGK
Sbjct: 168 VWRRQTSLAPDSFPWNESVGQQK-------AEGASANNSNGK 202
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 180 EDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEK 237
ED +E D ED + T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE
Sbjct: 120 EDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEG 179
Query: 238 LTRENVASHLQKYRLYLKRISCVANQQ 264
LTRENVASHLQKYRLYLKRI + ++
Sbjct: 180 LTRENVASHLQKYRLYLKRIQGLTTEE 206
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 171 KKRKDQNED---EDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAV 225
+K+ D E ED +E D ED + T K+PR+VW+ +LH++FV V LGI AV
Sbjct: 108 QKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAV 167
Query: 226 PKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQ 264
PK I+ LMNVE LTRENVASHLQKYRLYLKRI + ++
Sbjct: 168 PKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEE 206
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V + A ++L+ DL++++V +P +
Sbjct: 158 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 217
Query: 74 DGFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+ LL L+ +E D+ PVIM+S V K + GA DYL+KP+R EL+N+WQH
Sbjct: 218 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 276
Query: 130 VVRRKKIDAKDQNNSDNQDKPHN---GSGQAEGMGNSDQNGK 168
V RR+ A D P N G +AEG ++ NGK
Sbjct: 277 VWRRQTSLAPDSF-------PWNESVGQQKAEGASANNSNGK 311
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL VDD+ C + +LR+C Y VTT A++LLR +F+L+++DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLRRG-TEFNLLLTDVMMPDID 109
Query: 75 GFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G KLL+ V LPVIM+S N ++V + + GA DYLLKPV ++++K +WQHV
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 132 RRK 134
R++
Sbjct: 170 RKQ 172
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D ++ LLR+C Y V + + A + L + +N+ DLV+++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQH+
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 132 RR 133
RR
Sbjct: 202 RR 203
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A + L+ DL++++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 131 VRR 133
RR
Sbjct: 122 WRR 124
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A +++R FDLV+++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 75 GFKLL-ELVGLE--MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G +LL +V + ++PVIM+S V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEG 159
RR ++ + + +N H + A G
Sbjct: 175 RRHAMNCQTNGSENNAASNHISANVANG 202
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 132 RR 133
RR
Sbjct: 203 RR 204
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 5/95 (5%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK--- 58
T E + D FP+GLRVLAV+ D C +LE L+ C Y+ T + A TAL +LRE K
Sbjct: 20 TGEEMAADTFPAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERKEYG 79
Query: 59 NKFDLVISDVHM--PDMDGFKLLELVGLEMDLPVI 91
N+FDLVIS+V M P+MDGFKLLEL+GLEMDLPVI
Sbjct: 80 NQFDLVISNVAMPKPNMDGFKLLELIGLEMDLPVI 114
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
+ ++VL VDDD + ++ LLR C Y VT S + A K L + N+ DLV+++V MP
Sbjct: 84 TSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPF 143
Query: 73 MDGF----KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+ G K++ + L+ ++PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQ
Sbjct: 144 VSGIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQ 202
Query: 129 HVVRR 133
HV RR
Sbjct: 203 HVWRR 207
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
+ ++VL VDDD + ++ LLR C Y VT S + A K L + N+ DLV+++V MP
Sbjct: 72 TSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPF 131
Query: 73 MDGF----KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+ G K++ + L+ ++PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQ
Sbjct: 132 VSGIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQ 190
Query: 129 HVVRR 133
HV RR
Sbjct: 191 HVWRR 195
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A + L+ DL++++V +P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 131 VRRKKIDAKDQN 142
RR I QN
Sbjct: 152 WRRHAISRPPQN 163
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A + L+ DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 131 VRR 133
RR
Sbjct: 170 WRR 172
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 88/150 (58%), Gaps = 17/150 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V+ + A + L+E + DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+ L LV +E D +PVIM+S + +V+K + G+ D+L+KPVR EL+N+WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 131 VRRK------------KIDAKDQNNSDNQD 148
RR+ +++A +NN+ + D
Sbjct: 163 WRRQTQTAGKIPRNSNRVEASSENNAASSD 192
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DPT L LLR+C Y VT S A + +L + DL++++V +P
Sbjct: 19 SFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPK 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + L P++M+S + +VMK + GA DYL+KP+RI EL N+W H
Sbjct: 79 SKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMH 138
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
+ RR+++ N +++ H+ + +S+ N N DD +D+
Sbjct: 139 MWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTN--------STNLFSDDTNDKKVR 190
Query: 190 NHEDP--TTQKKP 200
+H P +TQ P
Sbjct: 191 SHAGPEISTQVTP 203
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 179 DEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
D D +E D ED + T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE
Sbjct: 123 DPDAAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVE 182
Query: 237 KLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
LTRENVASHLQKYRLYLKR+ + N+ + L SS P
Sbjct: 183 GLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTP 222
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V + A ++L+ N DL++++V +P +
Sbjct: 54 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDLILAEVDLPSI 113
Query: 74 DGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+ LL L+ +E D +PVIM+S + V K + GA DYL+KP+R EL+N+WQH
Sbjct: 114 SGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 172
Query: 130 VVRRKK 135
V RR++
Sbjct: 173 VWRRRQ 178
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL V+DD + ++ LLR C Y VT S + A K+L + +N DLV+++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 150 GIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVW 209
Query: 132 RR 133
RR
Sbjct: 210 RR 211
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 177 NEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
E+E D +++ E+P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LMN
Sbjct: 84 EEEEADSGGGPENSGEEPAARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMN 143
Query: 235 VEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
VE LTRENVASHLQKYRLYLKR+ ++++ + L +S P
Sbjct: 144 VEGLTRENVASHLQKYRLYLKRMQGLSSEGPSASDHLFASTP 185
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 53/63 (84%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KKPR+VW+ ELH +F+ AVN LGI AVPK IL LMNVE +TRENVASHLQKYRLYLKR+
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRL 117
Query: 258 SCV 260
+ V
Sbjct: 118 AGV 120
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 172 KRKDQNEDEDDEDDEDDHNHEDPTTQ---KKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
+R D E+ D ++ EDP T K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 125 RRIDSGEEADSALRTENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKT 184
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
I+ LMNVE LTRENVASHLQKYRLYLKR+ ++++
Sbjct: 185 IMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSSE 219
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A ++L+ + DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G+ LL L+ + ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 104 GYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHVW 163
Query: 132 RRKKIDAKD---QNNSDNQD 148
RR+ A++ Q S QD
Sbjct: 164 RRQSSLARENCPQEESVGQD 183
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D + ++ LLR C Y V S + A K+L + +N+ DLV+++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PV+M+S + LV K ++ GA D+L+KP+R ELKN+WQH+
Sbjct: 144 GIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHLW 203
Query: 132 RR--------------------KKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ-NGKLN 170
RR K AK NNS + D+ +NGS SD +G +
Sbjct: 204 RRCHSSCGSGSESGTQTQKSVKSKNAAKSGNNSGSNDEEYNGSPALNLEDGSDHGSGTQS 263
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPT 195
RK ED+ D H +E P
Sbjct: 264 SWRKQAAEDQVDSPRLVSHLNEVPA 288
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 153 GSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNH-EDPTTQKKPRVVWSVELHRK 211
G+G A N K + ED + D+ + E K+ R+VW+ +LH++
Sbjct: 89 GNGHAGTHANGGSFPSFPGKGEAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKR 148
Query: 212 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY+KR+ C++N+
Sbjct: 149 FVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQCLSNE 200
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP L VL VD D L + C Y VTT S+A A KLL E K D+V+ +
Sbjct: 13 QFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQ 72
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMD + + V ++++ VIM+ +G VMK +T+GAC++ +KP ++KN+WQ
Sbjct: 73 MPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQC 132
Query: 130 VVRR 133
V R+
Sbjct: 133 VARK 136
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
K RK +E D D++ +DP+ T K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 127 KLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKT 186
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
I+ LMNVE LTRENVASHLQKYRLYLKR+ +N+
Sbjct: 187 IMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNE 221
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 185 DEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+E D ED + T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTREN
Sbjct: 128 EEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTREN 187
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
VASHLQKYRLYLKR+ + N+ + L SS P
Sbjct: 188 VASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTP 221
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+G S + VL VDD+ C + +LLRRC Y VT AL+LLR +F ++++
Sbjct: 22 DGPVTTSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLRRG-TEFHMLLT 80
Query: 67 DVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
DV MP +DG LL++V + D+PV+M+S N V + I HGA DYLLKPV +
Sbjct: 81 DVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAV 140
Query: 124 KNIWQHVVRRKKID 137
K++W HV R+ +++
Sbjct: 141 KHMWTHVWRKSQVN 154
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 102 bits (255), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 4/132 (3%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
+G S + VL VDD+ C + +LLR+C Y VTT AL+LLR +F L+++
Sbjct: 15 DGPTATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLRRG-TEFHLLLT 73
Query: 67 DVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
DV MP +DG LL++V + D+PVIM+S N V + I +GA DYLLKPV + +
Sbjct: 74 DVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAV 133
Query: 124 KNIWQHVVRRKK 135
K++WQHV R+ +
Sbjct: 134 KHMWQHVWRKSQ 145
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP L VL VD D L + C Y VTT S+A A KLL E K D+V+ +
Sbjct: 13 QFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQ 72
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MPDMD + + V ++++ VIM+ +G VMK +T+GAC++ +KP ++KN+WQ
Sbjct: 73 MPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQC 132
Query: 130 VVRR 133
V R+
Sbjct: 133 VARK 136
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 164 DQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQ--KKPRVVWSVELHRKFVAAVNQLGI 221
D++G + RK + D E+ E + + TT+ K+PR+VW+ +LH++FV V LGI
Sbjct: 94 DRDGSGSDSRKHRKIDSVIEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGI 153
Query: 222 DKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+ ++N + L +S P
Sbjct: 154 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTP 208
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 185 DEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+E D ED + T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTREN
Sbjct: 128 EEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTREN 187
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
VASHLQKYRLYLKR+ + N+ + L SS P
Sbjct: 188 VASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTP 221
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+DD ++ LLR C Y VT + A LL E + FDLV++DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++ E +P++++S +V + ++ GACDYL+KPVR ELKN+WQHV
Sbjct: 366 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 425
Query: 132 RR 133
R+
Sbjct: 426 RK 427
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 75/102 (73%), Gaps = 3/102 (2%)
Query: 53 LLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACD 112
+LRE+KN+FD++ +D+ M +MDG +LL+++ EMDLPV+++S + + +LV+KG+ GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 113 YLLKPVRIEELKNIWQHVVRRK---KIDAKDQNNSDNQDKPH 151
L+KPV++E LK WQHVVR+K ++ +Q +DK H
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKKINNTLERLEQPIRKEEDKLH 102
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 6/157 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A +++R FDLV+++V MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 75 GFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + +PVIM+S V++ + +GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 132 RRKKIDAKDQNNSDNQDKPH---NGSGQAEGMGNSDQ 165
RR ++ + + +N H N +++ NSD+
Sbjct: 138 RRHSMNTQTNASENNAASNHISANSGNRSKTGDNSDE 174
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A +LL+ + DL++++V +P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G+ LL L+ + ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 110 GYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVW 169
Query: 132 RRK 134
RR+
Sbjct: 170 RRQ 172
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + A +LL+ + DL++++V +P +
Sbjct: 49 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHNVDLILTEVDLPSIS 108
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G+ LL L+ + ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 109 GYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVW 168
Query: 132 RRK 134
RR+
Sbjct: 169 RRQ 171
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+DD ++ LLR C Y VT + A LL E + FDLV++DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++ E +P++++S +V + ++ GACDYL+KPVR ELKN+WQHV
Sbjct: 246 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 305
Query: 132 RR 133
R+
Sbjct: 306 RK 307
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT + + A K L N D+V+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVVMPSLT 136
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL+ + M L PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 132 RR 133
RR
Sbjct: 197 RR 198
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A + L+ DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + +V+K + GA D+L+KPVR EL N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 131 VRR 133
RR
Sbjct: 170 WRR 172
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S + VL VDD LLRRCQY VTT S A+ LL E +F+L+++DV MPD
Sbjct: 8 STVHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDVMMPD 58
Query: 73 MDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+DG LL V L ++PV+M+S N +VM I GA DY++KPV + +K++W H
Sbjct: 59 VDGPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAH 118
Query: 130 VVRRKK----IDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDD 185
V RRK+ + + ++++ + E G D + + + D E D
Sbjct: 119 VWRRKQRYQMVPRFENGREVDEEREFEAAAMEELRGGVDLEAGMLPVPETEEYSSDGESD 178
Query: 186 EDDHNHEDPTTQ 197
+D+ D +
Sbjct: 179 DDEARRGDAAAE 190
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L VL V+ D + ++ LLR+C Y V + A + L+ + DL++++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G+ LL LV + ++PVIM+S +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 104 GYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHVW 163
Query: 132 RRKKIDA 138
RR+ + A
Sbjct: 164 RRQTLSA 170
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 185 DEDDHNHEDPT--TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
+E D ED + T K+PR+VW+ +LH++FV V LGI AVPK I+ +MNVE LTREN
Sbjct: 128 EEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTREN 187
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
VASHLQKYRLYLKR+ + N+ + L SS P
Sbjct: 188 VASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTP 221
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 144/324 (44%), Gaps = 77/324 (23%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQY-----HVTTTSQAITALKLLRENKNKFDLVI 65
F L VL VD DP L L +LL + Y H+TTT A AL +++E ++FDLV+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLS------------GNGDPKLVMKGITHGACDY 113
++V MPDMD F L ++ L+M++ VI +S G + K I+ G Y
Sbjct: 75 ANVSMPDMDSFSFLHVL-LKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 114 LLKPVR---------------IEELK--------NIWQHVVRRKKIDAKDQNNS------ 144
+ + V IE K I VV + A NN+
Sbjct: 134 MWQHVYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYK 193
Query: 145 --DNQDKPHNGS-GQAEGMGNSDQNGKL----------NKKRKDQNE---------DEDD 182
+N++K + G + + S GK K+ K +E DED
Sbjct: 194 PMENKEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPTKFGFSRIDEDH 253
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
E ++ + D T RVVW+ E RKF A+N+LG DK+ PK IL +MN LT
Sbjct: 254 ERRKEYYIASDSRT----RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQ 308
Query: 243 VASHLQKYRLYLKRISCVANQQAN 266
VA+HLQKY+ ++ C ++ N
Sbjct: 309 VANHLQKYK---AQVECFKRRREN 329
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 169 LNKKRKDQNEDEDDEDDEDDHNHEDPT---TQKKPRVVWSVELHRKFVAAVNQLGIDKAV 225
L K+RKD +D + N + T T K+PR+VW+ +LH++FV AV LGI AV
Sbjct: 73 LFKERKDAGNAKDTDSGGGPVNSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 132
Query: 226 PKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
PK I+ LMNVE LTRENVASHLQKYRLYLKR+ +++ L SS P
Sbjct: 133 PKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSSDGPPANDQLFSSTP 183
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LL +C Y V + A + L+ + DL++++V +P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 131 VRRKKI 136
RR +
Sbjct: 154 WRRHAV 159
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + L+ LLR C Y V + + A K+L + N DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 132 RR 133
RR
Sbjct: 209 RR 210
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D ++ LLR+C Y V + + A + L + +N+ DLV+++V MP +
Sbjct: 83 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 142
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + +PVIM+S N V K ++ GA D+L+KP+R ELK +WQH+
Sbjct: 143 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 202
Query: 132 RR 133
RR
Sbjct: 203 RR 204
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL V+DD + ++ LL+ C Y VT S + A K+L + +N DLV+++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 133 GIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVW 192
Query: 132 RR 133
RR
Sbjct: 193 RR 194
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT + + A K+L N D+V+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVVMPSLS 136
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL+ + + L PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 132 RR 133
RR
Sbjct: 197 RR 198
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL V++D + ++ LLR C Y VT TS + A ++L++ N DLV+++V++P + G
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSG 118
Query: 76 FKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
LL + ++PVIM+S + LV+K ++ GA D+L+KPVR ELK +WQH+ R
Sbjct: 119 IALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWR 178
Query: 133 RKK 135
R++
Sbjct: 179 RRQ 181
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 132 RR 133
RR
Sbjct: 202 RR 203
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A +L+E DLV+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S N +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 131 VRRK 134
R++
Sbjct: 162 WRKQ 165
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A +L+E DLV+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S N +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 131 VRRK 134
R++
Sbjct: 162 WRKQ 165
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLR-ENKNKFDLVISDVHM 70
P+ + +L VDD+ +++ LLR+C Y VT + AL++LR + F L+++DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 71 PDMDGFKLLELV-GLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
PD+DG +LL V G E +LPVIM+S N + V + I GA DYLLKPV +E++++W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 128 QHVVRRKK 135
QHV RR++
Sbjct: 122 QHVWRRQQ 129
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A LL+E DLV+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEVELPLMS 102
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S + +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 131 VRRK 134
R++
Sbjct: 162 WRKQ 165
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+S+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LLE + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 132 RR 133
RR
Sbjct: 141 RR 142
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 151 HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHR 210
H GSG G G DQ + ED+ K+PR+VW+ +LH+
Sbjct: 92 HAGSG---GGGAEDQKSPSPNSDSNSAEDQSAR------------ALKRPRLVWTPQLHK 136
Query: 211 KFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAA 270
+FV V LGI AVPK I+ LMNVE LTR+NVASHLQKYRLYLKR+S ++N+ ++
Sbjct: 137 RFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASHLQKYRLYLKRMSGLSNEGPSVSDP 196
Query: 271 LGSSDP 276
+ +S P
Sbjct: 197 IFASTP 202
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D D E T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVA
Sbjct: 117 DRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVA 176
Query: 245 SHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
SHLQKYRLYLKR+ ++++ + L +S P
Sbjct: 177 SHLQKYRLYLKRMQGLSSEGPSASDQLFASTP 208
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 6 VNGDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
+N D F L+VL V++D + ++ LLR C Y VT + + A K+L + N D+
Sbjct: 84 INWDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDI 143
Query: 64 VISDVHMPDMDGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
V+++V MP + G LL + ++PVIM+S + +V K ++ GA D+L+KP+R
Sbjct: 144 VLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRK 203
Query: 121 EELKNIWQHVVRR 133
ELKN+WQHV RR
Sbjct: 204 NELKNLWQHVWRR 216
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V S I A K+L + N D+V+++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 132 RR 133
RR
Sbjct: 205 RR 206
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 20 VDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLL 79
++ D + ++ LLR+C Y VT + A ++LR + DL++++V +P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 80 ELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
L+ + ++PVIM+S V K + GA DYL+KP+R ELKN+WQHV R++
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Query: 171 KKRK-DQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKI 229
K+RK D E+ + + T K+PR+VW+ +LH++FV V LGI AVPK I
Sbjct: 115 KQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTI 174
Query: 230 LDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
+ LMNVE LTRENVASHLQKYRLYLKR+ ++N+ + L +S P
Sbjct: 175 MQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSASDQLFASTP 221
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+ D + ++ LLR C Y V + + A K+L + N DLV+++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 75 GFKLL-ELVG--LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++G ++PV+M+S + LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 132 RR 133
RR
Sbjct: 199 RR 200
>gi|226875197|gb|ACO88946.1| cytokinin B-type response regulator 3 [Vitis vinifera]
Length = 76
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 61/76 (80%), Gaps = 6/76 (7%)
Query: 113 YLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMG-----NSDQNG 167
YLLKPVRIEELKNIWQHV+RRKKID+KDQN S +QD + G+ G G N+DQNG
Sbjct: 1 YLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSXDQDNALHADGEG-GEGPPSSSNADQNG 59
Query: 168 KLNKKRKDQNEDEDDE 183
KLN+KRKDQNEDE++E
Sbjct: 60 KLNRKRKDQNEDEEEE 75
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%)
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
D+ ++ T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVA
Sbjct: 123 DDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVA 182
Query: 245 SHLQKYRLYLKRISCVANQ 263
SHLQKYRLYLKR+ ++N+
Sbjct: 183 SHLQKYRLYLKRMQGLSNE 201
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+ D + ++ LLR C Y V + + A K+L + N DL++++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 75 GFKLL-ELVG--LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++G ++PV+M+S + LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V + + A ++L+ + DL++++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILTEVDLPSIS 124
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G+ LL ++ + ++PVIM+S V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 125 GYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHVW 184
Query: 132 RRKKIDAKD---QNNSDNQDK 149
RR+ A Q+ S QDK
Sbjct: 185 RRQSSLAGGNGPQDESVGQDK 205
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 163 SDQNGKLNKKRKDQNED----EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQ 218
+D++G + RK + D E+ + + T K+PR+VW+ +LH++FV V
Sbjct: 103 ADRDGSGSDSRKQRKIDCGVAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDVVAH 162
Query: 219 LGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+ ++N+
Sbjct: 163 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNE 207
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y V + + A ++L + N+ DLV+++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 132 RR 133
RR
Sbjct: 208 RR 209
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
++P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LMNV+ LTRENVASHLQKYR
Sbjct: 107 DEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYR 166
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 167 LYLKRM 172
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV--HM 70
GL+VLAVDDDP L L LRRC Y VT ALK L +N + FD V++
Sbjct: 19 EGLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRG 78
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
MDGF LL +G + VI+ SG + +G GAC KP+R ++ IWQHV
Sbjct: 79 RGMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHV 137
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHN 190
+R ++ +A ++ +P + G E +KR D D
Sbjct: 138 LRWRRENAAGVVAANANPRPSSEGGHLE---------DTPRKRGRGVNDSGKGKGASDGG 188
Query: 191 HEDPT--TQKKPRVVWSVELHRKFVAAVNQL 219
P T KK + W+ E+H FV+AV QL
Sbjct: 189 GVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 6/127 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQY-----HVTTTSQAITALKLLRENKNKFDLVI 65
F L VL VD DP L L +LL + Y H+TTT A AL +++E ++FDLV+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
++V MPDMD F L ++ L+M++ VI +S + + K + GAC +L KP+ +LK
Sbjct: 75 ANVSMPDMDSFSFLHVL-LKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 126 IWQHVVR 132
+WQHV R
Sbjct: 134 MWQHVYR 140
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 179 DEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL 238
DED E ++ + D T RVVW+ E RKF A+N+LG DK+ PK IL +MN L
Sbjct: 250 DEDHERRKEYYIASDSRT----RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCL 304
Query: 239 TRENVASHLQKYRLYLKRISCVANQQAN 266
T VA+HLQKY+ ++ C ++ N
Sbjct: 305 TLRQVANHLQKYK---AQVECFKRRREN 329
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 53/63 (84%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KK R+VW+ ELH +F++AVN LGI AVPK IL LMNVE +TRENVASHLQKYRLYLKR+
Sbjct: 59 KKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRL 118
Query: 258 SCV 260
+ V
Sbjct: 119 AGV 121
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 159 GMGNSDQNGKLNKKRKDQNEDEDDEDD----EDDHNHEDPTTQKKPRVVWSVELHRKFVA 214
G +S G RK + D +D D + + + T K+PR+VW+ +LH++FV
Sbjct: 71 GDDSSKGGGSAKNARKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVD 130
Query: 215 AVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
AV LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+
Sbjct: 131 AVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 173
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+DD + ++ LLR C Y V + + A LL + + DLV++DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 75 GFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + +PV+M+S + +V K +T GA D+L+KPVR ELKN+WQH
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 132 RRKK 135
R+ +
Sbjct: 162 RKAR 165
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 6 VNGDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDL 63
+N D F L+VL V++D + ++ LLR C Y VT + + A K+L + N D+
Sbjct: 84 INWDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDI 143
Query: 64 VISDVHMPDMDGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRI 120
V+++V MP + G LL + ++PVIM+S + +V K ++ GA D+L+KP+R
Sbjct: 144 VLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRK 203
Query: 121 EELKNIWQHVVRR 133
ELKN+WQHV RR
Sbjct: 204 NELKNLWQHVWRR 216
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 167 GKLNKKRKDQNEDEDDEDD----EDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID 222
G RK + D +D D + + + T K+PR+VW+ +LH++FV AV LGI
Sbjct: 75 GSAKNARKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIK 134
Query: 223 KAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+
Sbjct: 135 NAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 169
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 4/132 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK-NKFDLVISDVHM 70
PS VL VDD+ +L +LL +C Y VT+ S + AL+LLR + + F LV++DV M
Sbjct: 45 PSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCM 104
Query: 71 PDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
P+++G +LL V + +L PV+M+S + V + + GA +YL+KPV +E+++IW
Sbjct: 105 PELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIW 164
Query: 128 QHVVRRKKIDAK 139
QHV R++ A+
Sbjct: 165 QHVWRKRCAAAQ 176
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 246
D+ + E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASH
Sbjct: 71 DNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 130
Query: 247 LQKYRLYLKRISCVANQQANMVAALGSSDPSYLRM 281
LQKYRLYLKR+ ++ V + S+DP+ R+
Sbjct: 131 LQKYRLYLKRMQGLS--AGGGVGRVASADPTTDRL 163
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LR+L V+ D ++ LLR C Y VT + A LL + + FDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++ E +P++++S +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 243 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 302
Query: 132 RR 133
R+
Sbjct: 303 RK 304
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V S I A K+L + N D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197
Query: 132 RR 133
RR
Sbjct: 198 RR 199
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LR+L V+ D ++ LLR C Y VT + A LL + + FDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++ E +P++++S +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 243 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 302
Query: 132 RR 133
R+
Sbjct: 303 RK 304
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 132 RR 133
RR
Sbjct: 181 RR 182
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 153 GSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNH-EDPTTQKKPRVVWSVELHRK 211
G+G A N K ED + D+ + E K+ R+VW+ +LH++
Sbjct: 89 GNGHAGTHANGGSFPSFPGKGAAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKR 148
Query: 212 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY+KR+ ++N+
Sbjct: 149 FVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNE 200
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY+K
Sbjct: 111 TSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 170
Query: 256 RISCVANQ 263
R+ ++N+
Sbjct: 171 RMQGLSNE 178
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 23/173 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y VT + A ++L + K+ DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR----------------KKIDAKDQNNSDN----QDKPHNGSGQAEGMGNSD 164
RR K + + S+N D+ N SG + G+ N D
Sbjct: 184 RRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQD 236
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 13/174 (7%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y V + A K+L + N DLV+++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 134 GIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 193
Query: 132 RR----------KKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKD 175
RR K + + ++ N S ++ +G+ NG N+ D
Sbjct: 194 RRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELGDYGSNGPSNRDGSD 247
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A +L+E DLV+++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S + +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQHV 162
Query: 131 VRRK 134
R++
Sbjct: 163 WRKQ 166
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 23/173 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y VT + A ++L + K+ DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR----------------KKIDAKDQNNSDN----QDKPHNGSGQAEGMGNSD 164
RR K + + S+N D+ N SG + G+ N D
Sbjct: 184 RRCHSSSGSGSESGIHDKKSVKPESTEGSENDASISDEHRNESGSSGGLSNQD 236
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LR+L V+ D ++ LLR C Y VT + A LL + + FDLV++DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 75 GFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL +++ E +P++++S +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 132 RR 133
R+
Sbjct: 132 RK 133
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 8/134 (5%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C + + A + L++ ++ DL++++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWETLKKKASELDLILTEVELPAIS 88
Query: 75 GFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL L+ +E D+ PVIM+S + + +K + +GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 131 VRRKKIDAKDQNNS 144
RR I QN +
Sbjct: 148 WRRHTIITPTQNTT 161
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + L+ LL C Y V + + A K+L + N DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 132 RR 133
RR
Sbjct: 209 RR 210
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V + + A K+L + N D+V+++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 144 GISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 203
Query: 132 RR 133
RR
Sbjct: 204 RR 205
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 23/173 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y +T + A ++L + K+ DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR----------------KKIDAKDQNNSDN----QDKPHNGSGQAEGMGNSD 164
RR K + + S+N D+ N SG + G+ N D
Sbjct: 184 RRCHSSSGSGSESGIHDKKSVKPESTEGSENDASISDEHRNESGSSGGLSNQD 236
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A +L+E DLV+++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S + +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQHV 162
Query: 131 VRRK 134
R++
Sbjct: 163 WRKQ 166
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV QLGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 80 EPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 139
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 140 LYLKRM 145
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
D + +D K+PR+VW+ LH++FV AV+ LGI AVPK I+ LMNV+ LTRENVASHL
Sbjct: 242 DGSEDDAQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQLMNVDGLTRENVASHL 301
Query: 248 QKYRLYLKRI 257
QKYRLYLKR+
Sbjct: 302 QKYRLYLKRL 311
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHV-------TTTSQAITALKLLRENKNKFDLVISD 67
LRVL V+ D + ++ LLR+C Y V + A ++LR DL++++
Sbjct: 112 LRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKPESVDLILTE 171
Query: 68 VHMPDMDGFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
V +P + G+ LL L+ +E DL PVIM+S V K + GA DYL+KP+R EL
Sbjct: 172 VDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 230
Query: 124 KNIWQHVVRRKKIDAKDQN----NSDNQDKPHNGSG 155
+N+WQHV RR+ A N S Q KP S
Sbjct: 231 RNLWQHVWRRQSSLAPGSNFPVDESLGQQKPEGASA 266
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y VT + A ++L + K+ DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR 133
RR
Sbjct: 184 RR 185
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT S + A K+L++ N DLV+++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 132 RR 133
R+
Sbjct: 212 RK 213
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT S + A K+L++ N DLV+++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 132 RR 133
R+
Sbjct: 157 RK 158
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY+KR+
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 201
Query: 258 SCVANQ 263
++N+
Sbjct: 202 QGLSNE 207
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL V+ D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 132 RR 133
RR
Sbjct: 181 RR 182
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+ LRVL V+ D + ++ LLR C Y V + A + L+ DLV+++V +P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 72 DMDGFKLLELVGLEMD------LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
+ GF LL + MD +P+IM+S V K + +GA D+L+KPVR EL+N
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 126 IWQHVVRR 133
+WQHV RR
Sbjct: 128 LWQHVWRR 135
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K+ R+VW+ +LH++FV AV LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLKR+
Sbjct: 131 KRARLVWTPQLHKRFVEAVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 190
Query: 258 SCVAN 262
++N
Sbjct: 191 QGLSN 195
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 96.7 bits (239), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
KKPR+VW+ ELH +F+ AV LG+ AVPK IL LMNVE +TRENVASHLQKYRLYLKR
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 59
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LMNV+ LTRENVASHLQKYR
Sbjct: 105 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYR 164
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 165 LYLKRM 170
>gi|240254335|ref|NP_176988.4| pseudo-response regulator 6 [Arabidopsis thaliana]
gi|363548390|sp|Q9C9F6.2|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6;
AltName: Full=Pseudo-response regulator 6
gi|332196644|gb|AEE34765.1| pseudo-response regulator 6 [Arabidopsis thaliana]
Length = 755
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ +L +D D + L ++L++ V + A AL ++ + K + L+I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
L + L+ D+P+I+++ K +T AC L KP+ +++KN+WQHV +K
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 135 KIDAKDQNNSDNQDKPHNG-SGQAEGMGNSDQNGKLN--------------------KKR 173
+ K N +++Q+ + + Q E + + +++ +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRV-----VWSVELHRKFVAAVNQLGIDKAVPKK 228
K E E+ + K V +W+ E H KF+AA++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
IL++MN LT V SHLQKY+ + +IS
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQIDQIS 281
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V + + A K+L + N D+V+++V MP +
Sbjct: 95 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 154
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + L+ K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 155 GVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHVW 214
Query: 132 RR 133
RR
Sbjct: 215 RR 216
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V + + A K+L + N D+V+++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 134 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 193
Query: 132 RR 133
RR
Sbjct: 194 RR 195
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 192 EDPT-TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKY 250
E+P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKY
Sbjct: 82 EEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 141
Query: 251 RLYLKRI 257
RLYLKR+
Sbjct: 142 RLYLKRM 148
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 98 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 157
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 158 LYLKRM 163
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 95 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 154
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 155 LYLKRM 160
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 94 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 153
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 154 LYLKRM 159
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D L + TLL +C Y VT+ A + L D++++++ +P
Sbjct: 30 SKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDIILAELDLPL 89
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G KLL+ + + DL PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 130 VVRRKKIDAKDQNNSDNQD 148
V RR+++ + N N D
Sbjct: 150 VWRRRRMLGLAEKNILNYD 168
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 192 EDPT-TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKY 250
E+P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKY
Sbjct: 103 EEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 162
Query: 251 RLYLKRISCV 260
RLYLKR+ +
Sbjct: 163 RLYLKRMQGI 172
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 21 DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLL- 79
+DD ++ LLR C Y VT+ + A LL E + FDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 80 ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+++ E +P++++S +V + ++ GACDYL+KPVR ELKN+WQHV R+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V+DD + ++ LLR C Y VT + + A ++L + DLV++D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G +LL + + D +PV+M+S +V+K ++ GA D+L+KPVR ELKN+WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 131 VR 132
R
Sbjct: 228 WR 229
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 6/89 (6%)
Query: 174 KDQNEDEDDEDDED----DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKK 228
K QNED+ D +ED +HN + T+ K R VW+VELH+KFV AV QL G+DKA P++
Sbjct: 18 KKQNEDDSDRKEEDGKGNEHNGMESCTRMK-RTVWTVELHQKFVNAVQQLGGVDKASPEQ 76
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRI 257
I LMNVE L NVASHLQKYRLYLK+I
Sbjct: 77 IHALMNVEGLPVINVASHLQKYRLYLKKI 105
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKY 250
E T + RVVWS ELH+KF+ A++QLG DKA+PKKIL +MNVE LTR NVA+HLQKY
Sbjct: 333 ESRTRKNHGRVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQKY 392
Query: 251 RLYLKRISCVANQQANMVA 269
R + QQ NM
Sbjct: 393 R----QCCSTEAQQLNMAT 407
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y T + + A KLL++ N DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V + ++ GA D+L+KP+R ELK +WQHV
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 132 RR 133
RR
Sbjct: 209 RR 210
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y VT + A K+L + + DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVVMPVNS 123
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + L PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR 133
RR
Sbjct: 184 RR 185
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT + + A +L + N DLV+++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+ +KP+R ELKN+WQHV
Sbjct: 154 GIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVW 213
Query: 132 RR 133
R+
Sbjct: 214 RK 215
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 167 GKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVP 226
GK + D N + E + K+ R+VW+ +LH++FV V LGI AVP
Sbjct: 99 GKSSAAGDDNNNNSSAESAGEK---SAAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVP 155
Query: 227 KKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
K I+ LMNVE LTRENVASHLQKYRLY+KR+ ++N+
Sbjct: 156 KTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNE 192
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT + + A +L + N DLV+++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + +V K ++ GA D+ +KP+R ELKN+WQHV
Sbjct: 132 GIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVW 191
Query: 132 RR 133
R+
Sbjct: 192 RK 193
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 55/75 (73%)
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
E D E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTREN
Sbjct: 68 EFAADSAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTREN 127
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYLKR+
Sbjct: 128 VASHLQKYRLYLKRM 142
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 74 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 133
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 134 LYLKRM 139
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LLR C Y VT + A K+L + DLV+++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S +V K ++ GA D+L KP+R ELKN+WQHV
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 132 RR 133
R+
Sbjct: 218 RK 219
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+VE LTRENVASHLQKYR
Sbjct: 98 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 157
Query: 252 LYLKRI 257
LYL+R+
Sbjct: 158 LYLRRM 163
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V + A ++L+ DL++++V +P +
Sbjct: 51 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 110
Query: 74 DGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+ LL L+ +E D +PVI V K + GA DYL+KP+R EL+N+WQH
Sbjct: 111 SGYALLTLI-MEHDICKNIPVI---STDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 166
Query: 130 VVRRKKIDAKDQNNSD-NQDKPHNGSGQAEGMGNSDQNGK 168
V RR+ A D D Q KP EG ++ NGK
Sbjct: 167 VWRRQTSLAPDSFPLDERQQKP-------EGASANNSNGK 199
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 192 EDPT-TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKY 250
E+P T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKY
Sbjct: 83 EEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 142
Query: 251 RLYLKRISCV 260
RLYLKR+ +
Sbjct: 143 RLYLKRMQGI 152
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 97 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 156
Query: 252 LYLKRISCVAN 262
LYLKR+ +++
Sbjct: 157 LYLKRMQGLSS 167
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 82 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 141
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 142 LYLKRM 147
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 90 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 149
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 150 LYLKRM 155
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 103 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 162
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 163 LYLKRM 168
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 21 DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLL- 79
+DD ++ LLR C Y VT+ + A LL E + FDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 80 ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+++ E +P++++S +V + ++ GACDYL+KPVR ELKN+WQHV R+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 73 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 132
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 133 LYLKRM 138
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|302834688|ref|XP_002948906.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300265651|gb|EFJ49841.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 2120
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 53/63 (84%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
++PR++W+ ELH +F+A V QLG++ AVPK IL LM V+ +TRENVASHLQKYRLYL+R+
Sbjct: 1438 RRPRMLWTHELHCRFMAVVAQLGVETAVPKNILQLMAVDGMTRENVASHLQKYRLYLRRL 1497
Query: 258 SCV 260
+ V
Sbjct: 1498 AGV 1500
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+VE LTRENVASHLQKYR
Sbjct: 97 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 156
Query: 252 LYLKRI 257
LYL+R+
Sbjct: 157 LYLRRM 162
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 90 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 149
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 150 LYLKRM 155
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 89 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 148
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 149 LYLKRM 154
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 85 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 144
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 145 LYLKRM 150
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y V S + A ++L + K+ DLV+++V +P
Sbjct: 66 LKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHS 125
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 126 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 185
Query: 132 RR 133
R+
Sbjct: 186 RK 187
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 74 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 133
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 134 LYLKRM 139
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 85 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 144
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 145 LYLKRM 150
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAITALKLLRENKNKFDLVISDVHM 70
P +++L VDD+PT +++ LL + Y V A++L+ EN++ F+LV+ D+HM
Sbjct: 9 PKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI-ENRS-FNLVLCDLHM 66
Query: 71 PDMDGFKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
PD+DG +++ V + D P++M+S D +V K ++ GA DYLLKP++ +KN+W
Sbjct: 67 PDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLW 126
Query: 128 QHVVRRKK 135
Q+V R++K
Sbjct: 127 QNVWRKRK 134
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 8/133 (6%)
Query: 8 GDQFPSG-----LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKF 61
G + P+G L VL VDDD L L+ +L Y VT + A ALK + +N ++ F
Sbjct: 11 GCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYF 70
Query: 62 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E
Sbjct: 71 HIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSE 128
Query: 122 ELKNIWQHVVRRK 134
+K IW+HV+R +
Sbjct: 129 AIKFIWKHVLRWR 141
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 185 DEDDHNHEDPTTQKK--PRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL--TR 240
D +N E T +KK R W+ H FV A QL D+ PKKI LM ++ + T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTK 306
Query: 241 ENVASHLQKYRLYLK 255
V+SHLQKYR +L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYR
Sbjct: 74 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 133
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 134 LYLKRM 139
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
+VL V+ D + ++ LLR+C Y V I A K+L + N+ DLV+++V + G
Sbjct: 97 KVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVVTSGLSG 156
Query: 76 FKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
LL + + PVIM+S + LV+K ++ GA D+L+KP+R ELKN+WQHV R
Sbjct: 157 IGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNLWQHVWR 216
Query: 133 R 133
R
Sbjct: 217 R 217
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
KKPR+ WS ELH +F+ A+ QLGI AVPK IL LMNVE LTRENVASHLQKYR+ LKR
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 1329
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
T K+PR+VW+ +LH++F+ V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY K
Sbjct: 147 TPKRPRLVWTPQLHKRFIEVVAHLGIKGAVPKTIMQLMNVEGLTRENVASHLQKYRLYTK 206
Query: 256 RI 257
R+
Sbjct: 207 RM 208
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%)
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN 242
E+ DD + T K+PR+VW+ +LH++FV V LG+ AVPK I+ MNVE LTREN
Sbjct: 86 ENWVDDPSSAAARTLKRPRLVWTPQLHKRFVDVVGHLGMKNAVPKTIMQWMNVEGLTREN 145
Query: 243 VASHLQKYRLYLKRISCVANQQANMVAALGSSDP 276
VASHLQKYRLYLKR ++++ + L +S P
Sbjct: 146 VASHLQKYRLYLKRKQGLSSEGPSASDQLFASTP 179
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 8/133 (6%)
Query: 8 GDQFPSG-----LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKF 61
G + P+G L VL VDDD L L+ +L Y VT + A ALK + +N ++ F
Sbjct: 11 GCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYF 70
Query: 62 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E
Sbjct: 71 HIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSE 128
Query: 122 ELKNIWQHVVRRK 134
+K IW+HV+R +
Sbjct: 129 AIKFIWKHVLRWR 141
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 8/133 (6%)
Query: 8 GDQFPSG-----LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKF 61
G + P+G L VL VDDD L L+ +L Y VT + A ALK + +N ++ F
Sbjct: 11 GCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYF 70
Query: 62 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E
Sbjct: 71 HIVMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSE 128
Query: 122 ELKNIWQHVVRRK 134
+K IW+HV+R +
Sbjct: 129 AIKFIWKHVLRWR 141
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 185 DEDDHNHEDPTTQKK--PRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKL--TR 240
D +N E T +KK R W+ H FV A QL D+ PKKI LM ++ + T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTK 306
Query: 241 ENVASHLQKYRLYLK 255
V+SHLQKYR +L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 16/135 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH-------------VTTTSQAITALKLLRENKNKF 61
LRVL V++D + ++ LLR+C Y V + A + L + +N
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 62 DLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
DLV+++V MP + G LL + + D+PVIM+S N V K ++ GA D+L+KP+
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 119 RIEELKNIWQHVVRR 133
R ELKN+WQHV RR
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
KKPR+ WS ELH +F+ A+ QLGI AVPK IL LMNVE LTRENVASHLQKYR+ LKR
Sbjct: 855 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 913
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D ++ LL RC Y V+ A +++L +K DLV+S+V +P+
Sbjct: 12 SRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPN 71
Query: 73 MDGFKLLE-LVGLE--MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ +V E +P++M+S + +V+K + GA DYL+KP+RI EL N+W H
Sbjct: 72 GRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTH 131
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 132 MWRRRRM 138
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D ++ LL RC Y V+ A +++L +K DLV+S+V +P+
Sbjct: 12 SRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPN 71
Query: 73 MDGFKLLE-LVGLE--MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ +V E +P++M+S + +V+K + GA DYL+KP+RI EL N+W H
Sbjct: 72 GRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTH 131
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 132 MWRRRRM 138
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+DP L + TLL +C Y VT+ A + L D++++++ +P
Sbjct: 19 SRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPM 78
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L + + DL PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 79 AKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTH 138
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 139 MWRRRRM 145
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V S I A K+L + N D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQH
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
+VL V+ D + ++ LLR C Y V I A K+L + N+ DLV+++V + G
Sbjct: 97 KVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVVTSGLSG 156
Query: 76 FKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
LL + + PVIM+S + LV+K ++ GA D+L+KP+R ELKN+WQHV R
Sbjct: 157 IGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNLWQHVWR 216
Query: 133 R 133
R
Sbjct: 217 R 217
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+ K+ R+VW+ +LH++FV V LG+ AVPK I+ LMNVE LTRENVASHLQKYRLY+K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 256 RISCVANQ 263
R+ ++N+
Sbjct: 175 RMQGLSNE 182
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+ K+ R+VW+ +LH++FV V LG+ AVPK I+ LMNVE LTRENVASHLQKYRLY+K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 256 RISCVANQ 263
R+ ++N+
Sbjct: 175 RMQGLSNE 182
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D T L + TLL C Y VT A + L D+++
Sbjct: 10 GDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIIL 69
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L + + DL PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNE 129
Query: 123 LKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNS 163
L N+W H+ RR+++ + N + D GS Q++ NS
Sbjct: 130 LLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNS 170
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV AV QLGID+A+P +ILDLM VE LTR NVASHLQKYR++ K+
Sbjct: 314 RKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKYRMHRKQ 373
Query: 257 I--SCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHT--VGGPGQFQNSTFRSFPASGM 312
I V + N + S SY + YH+ V GQF +PA
Sbjct: 374 ILPKEVERRWPN-PQPIDSVQRSYYPHKPIMTFPQYHSNHVAPGGQF-------YPA--W 423
Query: 313 LGRLNAPAGLGMHGLP 328
+ + P GL + G P
Sbjct: 424 VTPASYPNGLQVWGSP 439
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL+VL +D+D +++ L + Y V + AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSA 73
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+ DG +L + DLP IM S +MK I GA ++L KP+ ++LKNIWQHV
Sbjct: 74 GNSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 131 VRRKKIDAKDQNNS 144
V + KD + S
Sbjct: 132 VHKAFNTRKDVSKS 145
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRV+ V++D + ++ LLR+C Y V A + L + +N DLV+++V MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 92.8 bits (229), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+ ++PR+VW+ +LH++FV V LGI KAVPK I++LMNVE LTRENVASHLQKYRLY+K
Sbjct: 113 SNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASHLQKYRLYVK 172
Query: 256 RI 257
R+
Sbjct: 173 RM 174
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 92.8 bits (229), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+ ++PR+VW+ +LH++FV V LGI KAVPK I++LMNVE LTRENVASHLQKYRLY+K
Sbjct: 113 SNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNVEGLTRENVASHLQKYRLYVK 172
Query: 256 RI 257
R+
Sbjct: 173 RM 174
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K+ R+VW+ +LH++FV V LG+ AVPK I+ LMNVE LTRENVASHLQKYRLY+KR+
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 176
Query: 258 SCVANQ 263
++N+
Sbjct: 177 QGLSNE 182
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 92.4 bits (228), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+ ++PR+VW+ +LH++FV V LGI KAVPK I++LMNVE LTRENVASHLQKYRLY+K
Sbjct: 89 SNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASHLQKYRLYVK 148
Query: 256 RI 257
R+
Sbjct: 149 RM 150
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KKP+V W+ ELHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 205 LLAREAEAASW 215
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KKP+V W+ ELHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 127 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 186
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 187 LLAREAEAASW 197
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KKP+V W+ ELHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 205 LLAREAEAASW 215
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 30/251 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK---FDLVISDVHMP 71
L L +D DP L + L + + V + A AL ++ K DLV+ +V++
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 72 DMD-----GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
+M L + E+ +P+ + D + + K + GAC +LLKP+ +
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNE----DEDD 182
W + K A Q S + +S +N ++ + E + ++
Sbjct: 125 WHQALEHKSKKAAPQRPS---------------LNDSTKNRMVSPSTEKPKEVLILERNN 169
Query: 183 EDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRE 241
+ +E+P +K+ RV W++ELH KF+ AV LG +K A P+KIL LMNV+ LT +
Sbjct: 170 LSVPQSNGYEEP--KKQNRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVK 227
Query: 242 NVASHLQKYRL 252
++ SHLQK+RL
Sbjct: 228 HIGSHLQKHRL 238
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL V+ D ++ LLR C Y V + A L + +N D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 132 RR 133
RR
Sbjct: 200 RR 201
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKFDLVISDVHMPDMDG 75
VL +DD L ++E LL++C Y VT AL +L+ N K+ FDL+++D+ MP +DG
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 76 FKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
L+ V + LPVI++S + + K T GA DYL+KP+R E+ +W H+ R
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 133 R 133
+
Sbjct: 135 K 135
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVAS LQKYR
Sbjct: 94 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASQLQKYR 153
Query: 252 LYLKRI 257
LYLKR+
Sbjct: 154 LYLKRM 159
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 28/147 (19%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK---NKFDLVISDVHM 70
G V+ V+DD CL ++E LLR+ Y V+T S ALK+L + K +K DL+++D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 71 PDMDGFKLL-ELVGLE--MDLPVI----------------------MLSGNGDPKLVMKG 105
P++ GF L+ E+V E D+PV+ ++S + V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 106 ITHGACDYLLKPVRIEELKNIWQHVVR 132
GA DYL+KP+R EL +WQHV R
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDE 180
RR + +S ++ G+ +NG D N D+
Sbjct: 203 RRCHSVSCLFLSSGSESGIQTQKCAKLNTGDEYENGS------DSNHDD 245
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D L + TLL C Y VT+ A + L D+++
Sbjct: 10 GDGFIDRSRVRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIIL 69
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L + + DL PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNE 129
Query: 123 LKNIWQHVVRRKKI 136
L N+W H+ RR+++
Sbjct: 130 LLNLWTHMWRRRRM 143
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D + TLL RC Y VT+ A + L D+++
Sbjct: 19 GDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIIL 78
Query: 66 SDVHMPDMDGFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L+ + + + +PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 79 AELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNE 138
Query: 123 LKNIWQHVVRRKKI 136
L N+W H+ RR+++
Sbjct: 139 LLNLWTHMWRRRRM 152
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLL---RENKNKFDLVISDVHMP 71
VL V+DD L +E LLR+C Y VT + A+K+L R + K DL+++D+ MP
Sbjct: 3 FHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMP 62
Query: 72 DMDGFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
++ GF L+ E+V + D+PV+++S + V++ GA DYL+KP+R EL +WQ
Sbjct: 63 EVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQ 122
Query: 129 HV 130
HV
Sbjct: 123 HV 124
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L VL V+ D + ++ LLR C Y V + A L + +N DLV+++V MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S + V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 132 RRK 134
R++
Sbjct: 171 RQR 173
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/60 (71%), Positives = 49/60 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KK R+VW+ ELHR+FV AV LG AVPK I+ LMNV+ LTRENVASHLQKYRLYLKR+
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKRL 159
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + TLL +C Y VT+ A + L + D+++S+V +P
Sbjct: 23 SKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPM 82
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + DL PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 130 VVRRKKIDAKDQNNSDNQD 148
+ RR+ + + N N D
Sbjct: 143 MWRRRHMLGLAEKNILNYD 161
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
Query: 192 EDPTTQ--KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+D TT+ K+PR+VW+ +LHRKF +AV +LG DKAVPK I+ MN++ LTRENVASHLQK
Sbjct: 383 DDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQK 442
Query: 250 YRLYLKR 256
YR+ +R
Sbjct: 443 YRMIKRR 449
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
T K+PR+ W+ +LH++FV V+ LG+ A PK I+ +MNVE LTRENVASHLQKYRLYLK
Sbjct: 147 TLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLYLK 206
Query: 256 RISCVANQQANMV 268
R + +V
Sbjct: 207 RTQISSTTDEALV 219
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 54/66 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
+K R+VW+ ELH +F+ A++ LG+ AVPK IL +MNV+ +TRENVASHLQKYRLYL+R+
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASHLQKYRLYLRRL 262
Query: 258 SCVANQ 263
++++
Sbjct: 263 GGLSDK 268
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 47/60 (78%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
+KK R+ W+ ELH +FVAAV LG AVPK I+ LMNVE LTRENVASHLQKYR+YLK
Sbjct: 194 AEKKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVEGLTRENVASHLQKYRIYLK 253
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D + TLL RC Y VT+ A + L D+++
Sbjct: 21 GDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIIL 80
Query: 66 SDVHMPDMDGFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L+ + + + +PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 81 AELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 140
Query: 123 LKNIWQHVVRRKKI 136
L N+W H+ RR+++
Sbjct: 141 LLNLWTHMWRRRRM 154
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 29/149 (19%)
Query: 195 TTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYL 254
+ +KK +V W+ ELH+KFV AV QLGID+A+P +ILD+M VE LTR N+ASHLQKYR++
Sbjct: 312 SNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASHLQKYRMHR 371
Query: 255 KRI----------------------------SCVANQQANMVAALGSSDPSYLRMSSV-N 285
++I +N VA G P+++ +S N
Sbjct: 372 RQILPREVERRWPHPQPRDSVQRNYYPHKPVMTFPPYHSNHVAPAGQCYPAWVPPASYPN 431
Query: 286 GLGNYHTVGGPGQFQNSTFRSFPASGMLG 314
GL + + PG T+ P G+L
Sbjct: 432 GLQVWGSPYYPGWQPAETWHWKPHPGLLA 460
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL+VL +D+D + +++ L + Y V T AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSA 73
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
D DG +L+ + +LP IM S +MK I GA ++L KP+ ++LKNIWQHV
Sbjct: 74 GDNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 131 VRR 133
V +
Sbjct: 132 VHK 134
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L +D+ L L +L C Y VTT AL LR+ +FDLV+ D++MP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 77 KLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+LL L+ + LPV+++S +GD ++ + GA DYL+KPVR +E K + +H+
Sbjct: 69 ELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 7 NGDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
+GD F S +R+L D+D + TLL C Y V + A + L D++
Sbjct: 27 SGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQYIDMI 86
Query: 65 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+++V +P G KLL+ + + +L PVIM+S + +V+K + GA DYL+KP+R
Sbjct: 87 LAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 146
Query: 122 ELKNIWQHVVRRKKIDAKDQNNSDNQD 148
EL N+W H+ RR+++ +NN N D
Sbjct: 147 ELLNLWTHMWRRRRMLGLVENNILNYD 173
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D T + LL C YHVT + +L + D+++++V +P
Sbjct: 22 SKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 81
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + DL P+IM+S + +V+K + GA +YL+KP+R EL N+W H
Sbjct: 82 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 141
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 142 VWRRRRM 148
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D T + LL C YHVT + +L + D+++++V +P
Sbjct: 32 SKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 91
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + DL P+IM+S + +V+K + GA +YL+KP+R EL N+W H
Sbjct: 92 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 151
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 152 VWRRRRM 158
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D T L + TLL C Y VT A + L D+++
Sbjct: 10 GDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIIL 69
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L + + DL PVIM+S + +V+K + GA DYL+KP+ E
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNE 129
Query: 123 LKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNS 163
L N+W H+ RR+++ + N + D GS Q++ NS
Sbjct: 130 LLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNS 170
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 26/197 (13%)
Query: 133 RKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHE 192
R+++D D + ++ PH + + N+D+N K + K ++ + E
Sbjct: 284 REEVDIVDASMGESVASPHTQKRKV--LSNTDRNTKASNKVGVHSD-----------SCE 330
Query: 193 DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 252
+KK +V W+ ELH+KFV AV QLGID+A+P +IL+LM VE LTR NVASHLQKYR+
Sbjct: 331 IRGKRKKIKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVESLTRHNVASHLQKYRM 390
Query: 253 YLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGM 312
+ ++I + ++ + + SY + YH+ N T P M
Sbjct: 391 HKRQI--LPKEEERKWS--NQRERSYSVQRPIMAFPPYHS--------NHTHPLPPVYPM 438
Query: 313 LGRLNAP-AGLGMHGLP 328
G+ P AG+ + G P
Sbjct: 439 WGQSGGPMAGMQIWGSP 455
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL+VL + D + L Y+V+T AL ++ F + I +V
Sbjct: 37 FPKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESFHIAIVEVSS 96
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G FK LE DLP IM S N +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 97 SSAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQH 153
Query: 130 VVRR 133
VV +
Sbjct: 154 VVHK 157
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLY+KR
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKR 200
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D T + LL C YHVT + +L + D+++++V +P
Sbjct: 22 SKVRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 81
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + DL P+IM+S + +V+K + GA +YL+KP+R EL N+W H
Sbjct: 82 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 141
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 142 VWRRRRM 148
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
+ H+N + +++L VDD+P L +LE L Y++T S + ALK+++E+K FD
Sbjct: 876 IAHINSNY---QVKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFD 932
Query: 63 LVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV- 118
+++ DV MP M G+++ + ++LPV+ML+ PK +++G GA DYL KP
Sbjct: 933 IILLDVMMPKMSGYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFS 992
Query: 119 RIEELKNIWQHVV 131
++E L I HV+
Sbjct: 993 KVELLSRIKTHVL 1005
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D T + LL C YHVT + +L + D+++++V +P
Sbjct: 22 SKVRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEIDIILAEVDLPV 81
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + DL P+IM+S + +V+K + GA +YL+KP+R EL N+W H
Sbjct: 82 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 141
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 142 VWRRRRM 148
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
KKPR+ WS ELH +F+ A+ QLGI AVPK IL LMNVE LTRENVASHLQKYR+ LKR
Sbjct: 3 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 61
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + + LL +C Y VT + L D+++S+V +P
Sbjct: 18 SKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDIILSEVDLPM 77
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
GFK+L+ + + DL PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 78 AKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTNELLNLWTH 137
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 138 MWRRRRM 144
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D + + LL C YHVT + +L + D+++++V +P
Sbjct: 26 SKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 85
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + DL P+IM+S + +V+K + GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 145
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 146 VWRRRRM 152
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 7 NGDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
+GD F S +R+L D+D + LL C Y VT+ A + L D++
Sbjct: 27 SGDGFIDRSKVRILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQYIDII 86
Query: 65 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+++V +P G KLL+ + + +L PVIM+S + +V+K + GA DYL+KP+R
Sbjct: 87 LAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 146
Query: 122 ELKNIWQHVVRRKKIDAKDQNN 143
EL N+W H+ RR+++ +NN
Sbjct: 147 ELLNLWTHMWRRRRMLGLVENN 168
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D D + TLL +C Y VT+ + L + D+++S+V +P
Sbjct: 17 SKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDIILSEVDLPM 76
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+K+L+ + + +L PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 77 SKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTNELLNLWTH 136
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 137 MWRRRQM 143
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + LL C Y VT A + L D+++S+V +P
Sbjct: 27 SKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPDIDIILSEVDLPT 86
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + DL PVIM+S + LV+K + GA DYL+KP+R E+ N+W H
Sbjct: 87 KKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNEMLNLWTH 146
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNS 163
+ RR+++ + N N D S ++ NS
Sbjct: 147 MWRRRQMLGLAEKNIVNYDFDLAASDHSDANTNS 180
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP + LLR C Y VT + +L + D+++++V +P
Sbjct: 31 SKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPV 90
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 91 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 150
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 151 VWRRRRM 157
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + TLL +C Y VT+ A + L D+++S+V +P
Sbjct: 20 SKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILSEVDLPM 79
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + +L PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 80 NKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 139
Query: 130 VVRRKKI 136
+ RR+++
Sbjct: 140 MWRRRRM 146
>gi|242072558|ref|XP_002446215.1| hypothetical protein SORBIDRAFT_06g004760 [Sorghum bicolor]
gi|241937398|gb|EES10543.1| hypothetical protein SORBIDRAFT_06g004760 [Sorghum bicolor]
Length = 382
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 38/252 (15%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
V G++ L V+ VD++ +L Q+ V + ALK L++++ D +
Sbjct: 5 VIGERTSGDLSVIVVDENLCHANTTSCMLANLQFQVVVYVSPVDALKFLKDHERDTDFAL 64
Query: 66 SDVHMPDMDGFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
+V+M +M GF+ L+ L +L VIM+S + ++ + + GA + KP+ +
Sbjct: 65 VEVNMKEMHGFQFLDRSRELHKNLQVIMMSADTTWPMMKRSVELGARFLIKKPLDANTID 124
Query: 125 NIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
N+WQH +D K Q +D G+ MGN+ G
Sbjct: 125 NLWQH------LDLKFQRTDKIKDLFPGIEGK---MGNAFGEG----------------- 158
Query: 185 DEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVA 244
T K ++W+ L RKF+ AV LG + A PKKI LMNV + R+ ++
Sbjct: 159 ----------TKHKASHLMWTPFLQRKFLQAVELLG-EAATPKKIQFLMNVNSVGRKQIS 207
Query: 245 SHLQKYRLYLKR 256
+HLQK+R +++
Sbjct: 208 AHLQKHRKKIEK 219
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP+ + LL C Y VT + +L + D+++++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 146 VWRRRRM 152
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP+ + LL C Y VT + +L + D+++++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 146 VWRRRRM 152
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP+ + LL C Y VT + +L + D+++++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 146 VWRRRRM 152
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENK--NKFDLVIS 66
D FP GL VLAV+DD C +LE L+ Y+ A L +LRE K N FDLVIS
Sbjct: 4 DTFPIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVIS 63
Query: 67 DVHMPDMDGFKLLELVGLEMDLPV 90
+V +P+MDGF LL+L+GLEMDLPV
Sbjct: 64 NVIIPNMDGFNLLKLIGLEMDLPV 87
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ +LHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 142 KKKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 201
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 202 LLAREAEAASW 212
>gi|356543865|ref|XP_003540379.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 441
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 158 EGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVN 217
E + SD++ +N RK+ + + +N +P ++K +V W+ ELHR+FV AV
Sbjct: 131 EIVSKSDESVVMNPSRKESEKGRKSSNHAARNN--NPQGKRKVKVDWTPELHRRFVQAVE 188
Query: 218 QLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 189 QLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHL 228
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 49/59 (83%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
K+ R+VW+ +LH +F+AAV +LG+ AVPK I+ +MNV+ LTRENVASHLQKYRL LKR
Sbjct: 108 KRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASHLQKYRLTLKR 166
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
R+VW+ ELHR+F+ AVN LG+D AVPK I+ +MNVE LTRENVASHLQKYR LK+++
Sbjct: 508 RLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYR--LKQMTAE 565
Query: 261 ANQQANMVAAL 271
N +A+
Sbjct: 566 EKAAMNAKSAM 576
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
E+ +KK +V W+ ELH+KFV AV QLGID+A+P +IL+LM V+ LTR NVASHLQKYR
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYR 363
Query: 252 LYLKRI 257
++ ++I
Sbjct: 364 MHKRQI 369
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL ++ D + T L Y+V+T AL + + F + I +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
DG FK LE DLP IM S + +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCPDGGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 48/64 (75%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KK R+VW+ ELH +FV AV LG AVPK I+ LMNV+ LTRENVASHLQKYRLYLKR
Sbjct: 105 KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKRT 164
Query: 258 SCVA 261
A
Sbjct: 165 RVAA 168
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D L + TLL +C Y VT+ A + L D+++
Sbjct: 10 GDGFIDRSRVRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIIL 69
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L + + DL PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNE 129
Query: 123 LKNIWQHVVRRKKI 136
L N+W ++ RR+++
Sbjct: 130 LLNLWTYMWRRRRM 143
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP + LL C Y VT + +L + D+++++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ +G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 149 VWRRRRM 155
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP + LL C Y VT + +L + D+++++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ +G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 149 VWRRRRM 155
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP + LL C Y VT + +L + D+++++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ +G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 149 VWRRRRM 155
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV AV QLGID+A+P +IL++M VE LTR NVASHLQKYR++ KR
Sbjct: 311 RKKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIH-KR 369
Query: 257 ISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRL 316
S + + +Y + YH+ + T P M G+
Sbjct: 370 QSAPREEDRKWHNQGDAMQRNYYMQRPIMAYPPYHS--------HHTLSPAPIYPMWGQP 421
Query: 317 NA-PAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSH 360
+ AG+ + G P PM H S +H PG H
Sbjct: 422 GSQTAGVQIWGHPG---YPMWHPTES---------WHWKPYPGVH 454
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL ++ D + + L Y V+T AL L + F + I +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIVEVST 73
Query: 71 P-DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ GFK LE DLP IM S + +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCSLGGFKFLENAK---DLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV AV QLG+D+A+P +IL+LM VE LTR NVASHLQKYR++ +
Sbjct: 314 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 373
Query: 257 I 257
I
Sbjct: 374 I 374
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +DDD T + + L Y V+T AL + F + I +V
Sbjct: 14 FPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVST 73
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+ FK LE DLP IM+S +MK I GA ++L KP+ ++L+NIWQHV
Sbjct: 74 GNNGSFKFLETAK---DLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSEDKLRNIWQHV 130
Query: 131 VRR 133
V +
Sbjct: 131 VHK 133
>gi|357474449|ref|XP_003607509.1| Two-component response regulator-like APRR2 [Medicago truncatula]
gi|355508564|gb|AES89706.1| Two-component response regulator-like APRR2 [Medicago truncatula]
Length = 442
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 135 KIDAKDQNNSDNQDKPH-NGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHED 193
K++ K+ + D +DK +G G E D++ +N KD + +
Sbjct: 116 KVEEKN-SKKDYEDKTSCSGQGSEEIASKRDESVVVNPLLKDAGGKGRKSSSKSKY---- 170
Query: 194 PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 253
P ++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR +
Sbjct: 171 PQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 230
Query: 254 LKRI------SCVANQQANMVAALG 272
K + + NQ+ + LG
Sbjct: 231 RKHLLAREAEAASWNQRRQVYGGLG 255
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + TLL C Y VT+ A + L + D+++++V +P
Sbjct: 25 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 84
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + +L P+IM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 85 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 144
Query: 130 VVRRKKIDAKDQNNSDNQD 148
+ RR+++ + N N D
Sbjct: 145 MWRRRRMLGLAEKNILNYD 163
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D + LL +C Y V + S A + L + D+++
Sbjct: 23 GDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIIL 82
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
S+V +P G K+L+ + + +L PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 83 SEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNE 142
Query: 123 LKNIWQHVVRRKK 135
L N+W H+ RR++
Sbjct: 143 LLNLWTHMWRRRR 155
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 86.3 bits (212), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 26 CLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVG 83
CL++LE +LR C Y VT ++A TAL LLR NK+ FD+VISDVHMPDMDGFKLLE +G
Sbjct: 1 CLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + TLL C Y VT+ A + L + D+++++V +P
Sbjct: 23 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 82
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + +L P+IM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 130 VVRRKKIDAKDQNNSDNQD 148
+ RR+++ + N N D
Sbjct: 143 MWRRRRMLGLAEKNILNYD 161
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 187 KKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 246
Query: 257 I 257
+
Sbjct: 247 M 247
>gi|18399397|ref|NP_565476.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|75337286|sp|Q9SIV3.2|GLK1_ARATH RecName: Full=Transcription activator GLK1; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 1; AltName:
Full=Golden2-like protein 1; Short=AtGLK1
gi|13311003|gb|AAK16743.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432088|gb|AAK20120.1| golden2-like protein 1 [Arabidopsis thaliana]
gi|15451040|gb|AAK96791.1| Unknown protein [Arabidopsis thaliana]
gi|17221599|dbj|BAB78466.1| GPRI1 [Arabidopsis thaliana]
gi|20148313|gb|AAM10047.1| unknown protein [Arabidopsis thaliana]
gi|20198041|gb|AAD21709.2| expressed protein [Arabidopsis thaliana]
gi|20198084|gb|AAM15392.1| expressed protein [Arabidopsis thaliana]
gi|330251936|gb|AEC07030.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 420
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM V LTR NVASHLQKYR + K
Sbjct: 151 KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKH 210
Query: 257 ISCVANQQANMV 268
+ + AN
Sbjct: 211 LLAREAEAANWT 222
>gi|297832658|ref|XP_002884211.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
gi|297330051|gb|EFH60470.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM V LTR NVASHLQKYR + K
Sbjct: 150 KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKH 209
Query: 257 ISCVANQQANMV 268
+ + AN
Sbjct: 210 LLAREAEAANWT 221
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W ELH+KFV AV QLG+D+A+P +IL+LM VE LTR NVASHLQKYR++ +
Sbjct: 320 RKKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 379
Query: 257 I 257
I
Sbjct: 380 I 380
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +DDD T + + L Y V+T AL + F + I +V
Sbjct: 14 FPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVST 73
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITH------GACDYLLKPVRIEELK 124
+ FK LE DLP I + + + + GA ++L KP+ ++L+
Sbjct: 74 GNNGSFKFLETAK---DLPTIRAGMHFLLTISLMDVFDNQMFQLGAVEFLRKPLSEDKLR 130
Query: 125 NIWQHVVRR 133
NIWQHVV +
Sbjct: 131 NIWQHVVHK 139
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D+D + LL +C Y V + S A + L + D+++S+V +P
Sbjct: 30 SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPM 89
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G K+L+ + + +L PVIM+S + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 130 VVRRKK 135
+ RR++
Sbjct: 150 MWRRRR 155
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV AV QLGID+A+P +IL++M VE LTR NVASHLQKYR++ KR
Sbjct: 286 RKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIH-KR 344
Query: 257 ISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRL 316
S + + +Y + YH+ N T P M G+
Sbjct: 345 QSAPREEDRKWHNQRDAMQRNYYMQRPIMAYPPYHS--------NHTLSPAPIYPMWGQP 396
Query: 317 NA-PAGLGMHGLP 328
+ AG+ + G P
Sbjct: 397 GSQTAGVQIWGHP 409
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL ++ D + + L Y+V+T AL L + F + I +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVST 73
Query: 71 P-DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ GFK LE DLP IM S + +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
Query: 163 SDQNGKLNKKRKDQN---EDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL 219
S Q + + ++++QN E D+ + NH P ++K +V W+ ELHR+FV AV QL
Sbjct: 138 STQKSEESTQQRNQNIVTPKESDKGKKSSKNHNLPG-KRKVKVDWTPELHRRFVQAVEQL 196
Query: 220 GIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
G+DKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 197 GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHL 234
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 252
+++K +V W+ +LHRKFV AV QLGID+A+P KIL+LMNVE LTR N+ASHLQKYR+
Sbjct: 43 SRRKMKVDWTPDLHRKFVQAVEQLGIDQAIPSKILELMNVEGLTRHNIASHLQKYRM 99
>gi|115435568|ref|NP_001042542.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|75321229|sp|Q5NAN5.1|GLK2_ORYSJ RecName: Full=Probable transcription factor GLK2; AltName:
Full=Golden2-like protein 2; Short=OsGLK2
gi|56784113|dbj|BAD81484.1| putative transcription factor OsGLK2 [Oryza sativa Japonica Group]
gi|113532073|dbj|BAF04456.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|215768049|dbj|BAH00278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM +E LTR N+ASHLQKYR + K
Sbjct: 213 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKH 272
Query: 257 ISCVANQQANMV 268
+ + A+
Sbjct: 273 LMAREAEAASWT 284
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L D DP + LL C Y VT + +L + D+++++V +P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 76 FKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
FK+L+ +G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 133 RKKI 136
R+++
Sbjct: 121 RRRM 124
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 129 HVVRR 133
HV RR
Sbjct: 150 HVWRR 154
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 129 HVVRR 133
HV RR
Sbjct: 149 HVWRR 153
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|13940500|gb|AAK50394.1|AF318582_1 putative transcription factor OsGLK2 [Oryza sativa Indica Group]
Length = 430
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM +E LTR N+ASHLQKYR + K
Sbjct: 104 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKH 163
Query: 257 ISCVANQQANMV 268
+ + A+
Sbjct: 164 LMAREAEAASWT 175
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 129 HVVRR 133
HV RR
Sbjct: 149 HVWRR 153
>gi|405983351|ref|ZP_11041657.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
gi|404388957|gb|EJZ84038.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
Length = 220
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+LA+DD+PT L LL T+L++ + VT A AL+L N ++FDL++ DV MP DG
Sbjct: 3 RILAIDDEPTILSLLATILKKDGHEVTAVESADRALEL---NLSRFDLILCDVMMPGTDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVVRRK 134
F + +V +D P++ L+ + + G++ GA DY+ KP EL+ + H+ R +
Sbjct: 60 FAFVSVVRDRLDCPIVFLTAKSEENDAVTGLSVGADDYIRKPFGAAELRAKVSAHLRRER 119
Query: 135 K 135
+
Sbjct: 120 R 120
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 129 HVVRR 133
HV RR
Sbjct: 150 HVWRR 154
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 129 HVVRR 133
HV RR
Sbjct: 150 HVWRR 154
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 129 HVVRR 133
HV RR
Sbjct: 149 HVWRR 153
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|384246638|gb|EIE20127.1| hypothetical protein COCSUDRAFT_57853 [Coccomyxa subellipsoidea
C-169]
Length = 402
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 24/129 (18%)
Query: 167 GKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVP 226
G + KR Q + EDD + K+PR+VW+ +LH+ FV AV QLG+ AVP
Sbjct: 207 GATSSKRNQQEGPKATSTGEDDADENQARALKRPRLVWTAKLHQCFVQAVEQLGLKNAVP 266
Query: 227 KKILD-----------------------LMNVEKLTRENVASHLQKYRLYLKRISCVANQ 263
K I+ LM+V+ LTRENVASHLQKYRL LK+ + + +
Sbjct: 267 KTIMQACFPTSATRLHPLSCPLQSVLAPLMHVDGLTRENVASHLQKYRLQLKKENKL-DD 325
Query: 264 QANMVAALG 272
+ N+++ G
Sbjct: 326 EGNLISGAG 334
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K
Sbjct: 179 KKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKYRSHRKH 238
Query: 257 I------SCVANQQANMVAALGSS 274
+ + Q+ M AA G +
Sbjct: 239 MMAREAEAASWTQRRQMYAAGGPA 262
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 153 GSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKF 212
G+G + G G+ + E E + H+H +KK +V W+ +LHR+F
Sbjct: 147 GNGDSGEGGCGTVLGEKSPSSTTSQEAESRHKSSNKHSH----GKKKAKVDWTPDLHRRF 202
Query: 213 VAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 203 VQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 247
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|449490377|ref|XP_004158587.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 453
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM +E LTR NVASHLQKYR + K
Sbjct: 167 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQKYRSHRKH 226
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 227 LLAREAEAASW 237
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|224095575|ref|XP_002310413.1| predicted protein [Populus trichocarpa]
gi|222853316|gb|EEE90863.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM ++ LTR N+ASHLQKYR + K
Sbjct: 156 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKH 215
Query: 257 ISCVANQQANM 267
+ + AN
Sbjct: 216 LLAREAEAANW 226
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+K+ R+VW+ LH +FVA V +LG+D AVPK I+ +MNVE LTRENVASHLQKYR+ LKR
Sbjct: 73 RKRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKR 132
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 129 HVVRR 133
HV RR
Sbjct: 161 HVWRR 165
>gi|168011157|ref|XP_001758270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669165|gb|AAV54521.1| golden 2-like protein 2 [Physcomitrella patens]
gi|162690726|gb|EDQ77092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV QLG++KA P +IL+LM V+ LTR N+ASHLQKYR + +
Sbjct: 224 KKKAKVDWTPELHRRFVHAVEQLGVEKAYPSRILELMGVQCLTRHNIASHLQKYRSHRRH 283
Query: 257 ISCVANQQANMVAALGSSDPSYLRMSSVNGL 287
++ + A+ + + R S +GL
Sbjct: 284 LAAREAEAASWTHRRTYTQAPWPRSSRRDGL 314
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PV+M+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|168059575|ref|XP_001781777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669163|gb|AAV54520.1| golden 2-like protein 1 [Physcomitrella patens]
gi|162666779|gb|EDQ53425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 511
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV QLG++KA P +IL+LM V+ LTR N+ASHLQKYR + +
Sbjct: 220 KKKAKVDWTPELHRRFVHAVEQLGVEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRH 279
Query: 257 ISCVANQQANMVAALGSSDPSYLRMSSVNGL 287
++ + A+ + + R S +GL
Sbjct: 280 LAAREAEAASWTHRRAYTQMPWSRSSRRDGL 310
>gi|449461539|ref|XP_004148499.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
gi|449530967|ref|XP_004172463.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 521
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 46/60 (76%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
KK +V W+ ELHR FV AV QLGID A+P KIL+LM VE LTR N+ASHLQKYR+ K +
Sbjct: 277 KKTKVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYRMQKKHV 336
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +D D + + L +Y V + + A + F + I +V
Sbjct: 14 FPKGLRVLLLDRDSFSATEIRSKLEEMEYVVYSCTDEKEASSAILNTPGNFHVAILEVCA 73
Query: 71 PDMD-GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ D FKLL G DLP+IM S +MK I GA ++LLKP+ ++L+NIWQH
Sbjct: 74 RNYDESFKLL---GASKDLPIIMTSDVHCLSTMMKCIALGAVEFLLKPLSEDKLRNIWQH 130
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNG 167
V+ K +NS D+ S + N D+NG
Sbjct: 131 VIH------KAYSNSSKPDEDSVASLMQFQLQNEDKNG 162
>gi|395216223|ref|ZP_10401240.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
gi|394455509|gb|EJF09975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
Length = 433
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L +DDDPT L+L T L+R QY V T A L L+ + FDL+++D +PD +G
Sbjct: 3 RILLIDDDPTFCLMLSTFLKRQQYEVKTAYTAGEGLSQLK--ADSFDLILTDFRLPDKNG 60
Query: 76 FKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+LLE + L+ +PVI+++ D + +K I GA +YL KP+ +E
Sbjct: 61 LELLEQIRVLDTQVPVILMTHYADIRTAVKAIKMGAFEYLAKPINPDE 108
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+LAVDD+P LLE LR+ Y AL +LR N N DLV+SD+HMP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILR-NDN-IDLVVSDLHMPVMDG 63
Query: 76 FKLLELVGLE-MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
KLLE + E +D PVI+++ G+ ++ + GA DY+L+P +E L+
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETLE 113
>gi|118722731|gb|ABL10089.1| golden 2-like protein [Triticum aestivum]
Length = 461
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K
Sbjct: 179 KKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKYRSHRKH 238
Query: 257 I------SCVANQQANMVAALGSS 274
+ + Q+ M AA G +
Sbjct: 239 MIAREAEAASWTQRRQMYAAGGPA 262
>gi|413952556|gb|AFW85205.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 476
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV +LGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 191 KKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 250
Query: 257 I 257
+
Sbjct: 251 M 251
>gi|219886905|gb|ACL53827.1| unknown [Zea mays]
Length = 476
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV +LGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 191 KKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 250
Query: 257 I 257
+
Sbjct: 251 M 251
>gi|162458514|ref|NP_001105018.1| G2-like1 [Zea mays]
gi|13940496|gb|AAK50392.1|AF318580_1 putative transcription factor ZmGLK1 [Zea mays]
gi|413952555|gb|AFW85204.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 475
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV +LGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 191 KKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 250
Query: 257 I 257
+
Sbjct: 251 M 251
>gi|449442040|ref|XP_004138790.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 455
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
+K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM +E LTR NVASHLQKYR + K +
Sbjct: 170 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQKYRSHRKHL 229
Query: 258 SCVANQQANM 267
+ A+
Sbjct: 230 LAREAEAASW 239
>gi|302143340|emb|CBI21901.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 58/83 (69%)
Query: 175 DQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
+ + E ++ + ++P ++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M
Sbjct: 70 NASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMG 129
Query: 235 VEKLTRENVASHLQKYRLYLKRI 257
++ LTR N+ASHLQKYR + K +
Sbjct: 130 IDCLTRHNIASHLQKYRSHRKHL 152
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 129 HVVRR 133
HV RR
Sbjct: 149 HVWRR 153
>gi|62632221|gb|AAX89130.1| golden2-like transcription factor [Zea mays]
Length = 469
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR+FV AV +LGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 188 KKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 247
Query: 257 I 257
+
Sbjct: 248 M 248
>gi|302754156|ref|XP_002960502.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
gi|300171441|gb|EFJ38041.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
Length = 271
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 163 SDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID 222
SD +G ++ +++Q+ + E+ E T KK +V W+ +LHR FV V +LG++
Sbjct: 83 SDHSGTVDAAQQEQHM----QRVENCRKKERSLTTKKTKVDWNPDLHRLFVQTVEELGLE 138
Query: 223 KAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMS 282
KA+P +IL++M VE LTR NVASHLQKYR KR + Q+ + + L D +++ S
Sbjct: 139 KAIPSRILEIMGVESLTRHNVASHLQKYRAQRKRKRAESKQKCSSLEPLNKRDCLHIQPS 198
Query: 283 -SV--------------NGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGL 322
S+ N + + T G P + + + S + +L+ P GL
Sbjct: 199 PSIPSTCLAMYGDSLLKNSISAWQTTGPPAKHSRNANKD--ESRVRSKLSLPMGL 251
>gi|334184330|ref|NP_001189562.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|330251937|gb|AEC07031.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 436
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
+V W+ ELHR+FV AV QLG+DKAVP +IL+LM V LTR NVASHLQKYR + K +
Sbjct: 171 KVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAR 230
Query: 261 ANQQANMV 268
+ AN
Sbjct: 231 EAEAANWT 238
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV++++ M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|225446455|ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
Length = 432
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 55/76 (72%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
++P ++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR
Sbjct: 148 KNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYR 207
Query: 252 LYLKRISCVANQQANM 267
+ K + + A+
Sbjct: 208 SHRKHLLAREAEAASW 223
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV++++ M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV++++ M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|159477193|ref|XP_001696695.1| hypothetical protein CHLREDRAFT_130971 [Chlamydomonas reinhardtii]
gi|158275024|gb|EDP00803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/63 (63%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
Query: 192 EDPTTQ--KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQK 249
+D TT+ K+PR+VW+ +LHRKF +AV +LG DKAVPK I+ MN++ LTRENVASHLQK
Sbjct: 7 DDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQK 66
Query: 250 YRL 252
YR+
Sbjct: 67 YRM 69
>gi|363807950|ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
gi|255638900|gb|ACU19752.1| unknown [Glycine max]
Length = 426
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 50/64 (78%)
Query: 194 PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 253
P ++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR +
Sbjct: 170 PQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 229
Query: 254 LKRI 257
K +
Sbjct: 230 RKHL 233
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 129 HVVRR 133
HV RR
Sbjct: 149 HVWRR 153
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV++++ M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA ++L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 129 HVVRR 133
HV RR
Sbjct: 150 HVWRR 154
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM-PDM 73
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 74 DGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G LL + + D+PVIM+S + V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 131 VRR 133
RR
Sbjct: 163 WRR 165
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ L E L R +T+ A+ AL++L++ + FDLVI+D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+LL + E DL VIM++ + + + ++ + +GA DY+ KP EEL Q + R++
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 136 IDAKDQNN 143
++ NN
Sbjct: 134 KQQEEVNN 141
>gi|307105497|gb|EFN53746.1| hypothetical protein CHLNCDRAFT_136336 [Chlorella variabilis]
Length = 575
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKY 250
+DP KK R++W+ LHR+F+ AVN++G +DKA+PK ++ M V LTRENVASHLQK+
Sbjct: 460 DDPCALKKARLIWTPALHRRFLEAVNRVGGVDKALPKAVMKEMGVSGLTRENVASHLQKH 519
Query: 251 RLYLKR 256
R+ LK+
Sbjct: 520 RMRLKK 525
>gi|307111029|gb|EFN59264.1| hypothetical protein CHLNCDRAFT_137569, partial [Chlorella
variabilis]
Length = 188
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLR-RCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
QFP GLRVL VDD +C + L QY VT+ S A AL LR FD+V+++
Sbjct: 6 QFPKGLRVLLVDDMHSCSSIRTQLESPSLQYTVTSVSSATEALGYLRTGVAAFDVVLAES 65
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+ D V + PV+++S G P VM+ + GA D+L KP+ +LKNIWQ
Sbjct: 66 RIVAADESVGRCFVDAFEETPVVLMSACGTPDDVMRAVKLGAVDFLDKPLSHLKLKNIWQ 125
Query: 129 HVVRR 133
H VR+
Sbjct: 126 HSVRK 130
>gi|126650201|ref|ZP_01722429.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
gi|126592851|gb|EAZ86833.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
Length = 1021
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+P L ++ET+L QY + T + + AL ++ +++DLVISDV MP M G
Sbjct: 689 RILVVDDEPINLRVVETILANEQYDIVTVTSGLDALVSIQ--SHEWDLVISDVMMPKMSG 746
Query: 76 FKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
++L+ L+ + DLP+++L+ P+ + KG GA DY+ KPV EL++ +++
Sbjct: 747 YELVRLIRKQFSITDLPILLLTARSQPQNLEKGFLAGANDYVTKPVDALELRSRVAALIK 806
Query: 133 RKK 135
K+
Sbjct: 807 VKR 809
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|381149245|gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
Length = 447
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 134 KKIDAKDQNNSDNQDKPHNGSG-----QAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
KK++ KD+ D GSG Q E + S Q + + + QN + D
Sbjct: 96 KKVERKDETERAASDV---GSGLTSLNQGEEI-VSTQKSEESTLQVKQNITPKESDKGKK 151
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
+ + ++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQ
Sbjct: 152 SSKNNLPVKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQ 211
Query: 249 KYRLYLKRI 257
KYR + K +
Sbjct: 212 KYRSHRKHL 220
>gi|297840627|ref|XP_002888195.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
gi|297334036|gb|EFH64454.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
Length = 117
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKY 250
E T + R VWS ELH+KF+ A++QLG DKA+PKKIL MNVE LTR NVA+HLQKY
Sbjct: 15 ESRTRKNHGRFVWSHELHQKFLNAIDQLGGNDKAIPKKILADMNVEGLTRLNVATHLQKY 74
Query: 251 RLYLKRISCVANQQANMVA 269
RL L+R + QQ NM
Sbjct: 75 RLTLERTTEA--QQLNMAT 91
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P R+L VDDD ++ LLR Y TT + A AL R K + LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 72 DMDGFKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
DGF LLE + D VIML+ GD + ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 131 VRRKKID 137
+ R++++
Sbjct: 124 LGRRRLE 130
>gi|298249478|ref|ZP_06973282.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
gi|297547482|gb|EFH81349.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
Length = 432
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLR-RCQ-YHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
R+L VDDDP L L +LR R Q HV T A AL+L+R +D+++SD+ MP M
Sbjct: 9 RLLVVDDDPALLQALPHMLRLRLQNLHVDTAESAQLALELVR--AQSYDVIVSDIKMPGM 66
Query: 74 DGFKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
DGF LL L L+ + PV++++G+G+ L ++ + GA DY+LKP+
Sbjct: 67 DGFDLLTALQDLQSETPVLLITGHGEHDLAIRALRGGAYDYILKPI 112
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P R+L VDDD ++ LLR Y TT + A AL R K + LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 72 DMDGFKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
DGF LLE + D VIML+ GD + ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 131 VRRKKID 137
+ R++++
Sbjct: 124 LGRRRLE 130
>gi|381149253|gb|AFF60409.1| golden 2-like 2 transcription factor [Solanum phureja]
Length = 317
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
++P ++K +V W+ ELHRKFV A+ +LG+DKAVP +IL+LM+ LTR N+ASHLQKYR
Sbjct: 85 KNPQGKRKVKVDWTPELHRKFVKAIEKLGVDKAVPSRILELMSTHGLTRHNIASHLQKYR 144
Query: 252 LYLKRI 257
+ K +
Sbjct: 145 AHRKHL 150
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 129 HVVRR 133
HV RR
Sbjct: 154 HVWRR 158
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 17/120 (14%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL V++D + ++ LLR C Y VT TS + A ++L++ N DLV+++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVNLPRLS- 117
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
++S + LV+K ++ GA D+L+KP+R ELK +WQH+ RR++
Sbjct: 118 ----------------VMSTDDSGALVLKCLSKGATDFLVKPIRKNELKFLWQHIWRRRQ 161
>gi|391868155|gb|AFM44933.1| golden2-like protein [Solanum lycopersicum]
gi|395629268|gb|AFN69447.1| golden 2-like 2 transcription factor [Solanum lycopersicum]
Length = 310
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 193 DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 252
+P +KK ++ W+ ELHRKFV A+ +LG+DKAVP +IL+LM LTR N+ASHLQKYR
Sbjct: 79 NPQGKKKVKLDWTPELHRKFVKAIEKLGVDKAVPSRILELMATHGLTRHNIASHLQKYRA 138
Query: 253 YLKRISCVANQQANM 267
+ K + + A++
Sbjct: 139 HRKHLLAREAEAASL 153
>gi|381149247|gb|AFF60406.1| golden 2-like 2 transcription factor [Capsicum annuum]
Length = 312
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYR 251
++P +KK +V W+ ELHR+FV AV +LG+DKAVP +IL+LM + LTR N+ASHLQKYR
Sbjct: 87 KNPEGKKKVKVDWTPELHRRFVKAVEKLGVDKAVPSRILELMATDGLTRHNIASHLQKYR 146
Query: 252 LYLKRI 257
+ K +
Sbjct: 147 AHRKHL 152
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDDP L +LE +L +Y VT + AL +L + ++DLVISD+ MP M G
Sbjct: 702 RLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL--DTKEWDLVISDIMMPQMSG 759
Query: 76 FKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKN 125
++L ++ +LPV++L+ PK + G GA DY+ KPV RIE L
Sbjct: 760 YELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEGMEIKSRIEALTT 819
Query: 126 IWQHVVRRKKIDA 138
I Q V + +++A
Sbjct: 820 IKQSVREQLRLEA 832
>gi|312281493|dbj|BAJ33612.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCV 260
+V W+ ELHR+FV AV QLG++KAVP +IL+LM V LTR NVASHLQKYR + K +
Sbjct: 16 KVDWTAELHRRFVEAVEQLGVEKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAR 75
Query: 261 ANQQANM 267
+ AN
Sbjct: 76 EAEAANW 82
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAITALKLLRENK---NKF 61
++ +F +GLRVLAVD+D L++L+ +L+ C Y +VT + TAL +LRE K ++F
Sbjct: 1 MDAARFRAGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQF 60
Query: 62 DLVISDVHMPD--MDGFKLLELVGLEMDLPVIMLS 94
DLVISD +P+ ++G K LELV +EMD+PVI +S
Sbjct: 61 DLVISDFFIPNNGINGLKFLELVAVEMDIPVIGIS 95
>gi|356542986|ref|XP_003539944.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 428
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 173 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKH 232
Query: 257 I 257
+
Sbjct: 233 L 233
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ LL++ETLL Y V T TAL+L R +N DLV++D+ MP M G
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALELTR--RNDLDLVVTDMKMPRMSGI 61
Query: 77 KLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+LLE L + DLPVIM++ G + ++ + GA DY+LKP + EE+
Sbjct: 62 ELLEQLKQVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYILKPFKNEEI 109
>gi|356549890|ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 436
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 163 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKH 222
Query: 257 I 257
+
Sbjct: 223 L 223
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 48 ITALKLLRENKNKFDLVISDVHMPDMDGFKLL-ELVGLE--MDLPVIMLSGNGDPKLVMK 104
+ A ++RE FDLV+++V MP + G +LL +V + ++PV+M+S V+K
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLK 60
Query: 105 GITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEG 159
+ GA D+L+KPVR EL+N+WQHV RR ++ + + +N H + A G
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNCQTNGSENNAASNHISANVANG 115
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
+VL VDDD +L LL + + V AL++LRE N + L++ DV MPDMDG
Sbjct: 91 KVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDMDG 150
Query: 76 FKLLELV--GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN----IWQH 129
+LL++ D+P+IM+S + DP + + GA D+L KPV++E LK +
Sbjct: 151 LQLLKIFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILKRRVNMCLED 210
Query: 130 VVRRKKIDA 138
+RR+K A
Sbjct: 211 RLRRRKEKA 219
>gi|195607208|gb|ACG25434.1| transcription factor ZmGLK1 [Zea mays]
Length = 460
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K
Sbjct: 181 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 240
Query: 257 I 257
+
Sbjct: 241 L 241
>gi|302847255|ref|XP_002955162.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
gi|300259454|gb|EFJ43681.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
Length = 61
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 49/59 (83%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
K+PR+VW+ +LH+KF +AV +LG +KAVPK I+ MN++ LTRENVASHLQKYR+ ++
Sbjct: 3 KRPRLVWTPQLHKKFESAVQKLGTEKAVPKNIMQEMNIDGLTRENVASHLQKYRMLRRK 61
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLK 116
DLV+++V +P M GF LL + +E D +PVIM+S N +V K + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 117 PVRIEELKNIWQHVVRRK----KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKK 172
P+R EL+N+WQHV R++ +ID + +N + H +A +S QN + +K
Sbjct: 60 PIRKNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN--VVRK 117
Query: 173 RKDQNEDEDD 182
++ +E E D
Sbjct: 118 NRECSEQESD 127
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 17/120 (14%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL V++D + ++ LLR C Y VT TS + A ++L++ N DLV+++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDXSNHIDLVLTEVNLPRLS- 117
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
++S LV+K ++ GA D+L+KP R ELK +WQH+ RR++
Sbjct: 118 ----------------VMSTXDSGALVLKCLSKGATDFLVKPXRKNELKFLWQHIWRRRQ 161
>gi|195614160|gb|ACG28910.1| transcription factor ZmGLK1 [Zea mays]
Length = 461
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 257 I 257
+
Sbjct: 242 L 242
>gi|162459635|ref|NP_001105513.1| golden plant2 [Zea mays]
gi|11177540|gb|AAG32325.1|AF298118_1 putative transcription factor Golden2 [Zea mays]
gi|13940494|gb|AAK50391.1|AF318579_1 putative transcription factor GOLDEN 2 [Zea mays]
gi|223946903|gb|ACN27535.1| unknown [Zea mays]
gi|414875563|tpg|DAA52694.1| TPA: golden plant2 [Zea mays]
Length = 461
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 257 I 257
+
Sbjct: 242 L 242
>gi|375011632|ref|YP_004988620.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
gi|359347556|gb|AEV31975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
Length = 472
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDDD T LL+L++ L + + T S A L+ + EN FDL++SD MP +DG
Sbjct: 9 KILVVDDDTTFLLMLKSFLEKKGFIPHTESTAEKGLQAIEENT--FDLILSDYRMPGIDG 66
Query: 76 FKLLELVGLE-MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
++L+++ + + P+I+++ GD KL + + GA DYL KPV EEL + V+
Sbjct: 67 IEMLKILKEKGITTPLILITSYGDIKLAVNAMKLGASDYLTKPVNPEELLALVTSVIETP 126
Query: 135 K---------IDAKDQNNSDNQDKPH 151
+ + K NSDN + H
Sbjct: 127 QEKSVPQVSALAKKSNTNSDNTPQSH 152
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL VL D + +L+ C Y VT + AL + + K F + D
Sbjct: 12 FPKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATN 71
Query: 71 PDM-DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
D+ DGFK+LE +L VIM+S D + +M+ I+ GA D+L KP E+LKNIWQH
Sbjct: 72 RDIFDGFKVLEAAK---ELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQH 128
Query: 130 VVRRKKIDAKDQNNS---DNQDKPHN 152
V R+ + + S D++ KP
Sbjct: 129 VARKAMLSTNSEPASTVADHEVKPET 154
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV AV QLG+DKA+P +IL+ M V+ LTR N+ASHLQKYR + K
Sbjct: 348 RKKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGVKCLTRHNIASHLQKYRSHRKH 407
Query: 257 I 257
+
Sbjct: 408 L 408
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL-QKYRLYL 254
++KK +V W+ ELHRKFV AV QLG+++A+P +IL+LM VE LTR NVASHL QKYR++
Sbjct: 311 SRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQKYRMHK 370
Query: 255 KRI 257
+ I
Sbjct: 371 RHI 373
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +D D + ++T L +Y V T AL + F + I +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ +G FK LE DLP IM+S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|51891888|ref|YP_074579.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
gi|51855577|dbj|BAD39735.1| two-component response regulator, probably involved in phosphate
sensing [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP R+L VDD+P+ L L+ LRR + V T L++ RE + DLVI DV +
Sbjct: 2 FPVPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREEE--IDLVILDVML 59
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P +DGF++L + +LPV+ML+ G+ + G GA DY+ KP EL + +
Sbjct: 60 PGIDGFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAI 119
Query: 131 VRRKKIDAKDQNN 143
+RR + A+ Q+
Sbjct: 120 LRRARRSAEPQDQ 132
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL-QKYRLYL 254
++KK +V W+ ELHRKFV AV QLG+++A+P +IL+LM VE LTR NVASHL QKYR++
Sbjct: 311 SRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQKYRMHK 370
Query: 255 KRI 257
+ I
Sbjct: 371 RHI 373
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +D D + ++T L +Y V T AL + F + I +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ +G FK LE DLP IM+S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 48 ITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMK 104
+ A ++RE FDLV+++V MP + G +LL + ++PVIM+S V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 105 GITHGACDYLLKPVRIEELKNIWQHVVRR----KKIDAKDQNNSDNQDKPHNGSGQAEG 159
+ GA D+L+KPVR EL+N+WQHV RR + +A + N + N + G+G G
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTG 119
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 5/71 (7%)
Query: 192 EDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL---- 247
E+ +KK +V W+ ELH+KFV AV QLGID+A+P +IL+LM V+ LTR NVASHL
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQIFV 363
Query: 248 -QKYRLYLKRI 257
QKYR++ ++I
Sbjct: 364 EQKYRMHKRQI 374
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL ++ D + T L Y+V+T AL + + F + I +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
DG FK LE DLP IM S + +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCPDGGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 61 FDLVISDVHMPDMDGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLK 116
DLV+++V +P M GF LL + +E D +PVIM+S N +V K + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 117 PVRIEELKNIWQHVVRRK----KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKK 172
P+R EL+N+WQHV R++ +ID + +N + H +A +S QN + +K
Sbjct: 60 PIRKNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN--VVRK 117
Query: 173 RKDQNEDEDD 182
++ +E E D
Sbjct: 118 NRECSEQESD 127
>gi|255553629|ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
gi|223542837|gb|EEF44373.1| DNA binding protein, putative [Ricinus communis]
Length = 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ +LHR+FV AV QLG+DKAVP +IL+LM ++ LTR N+ASHLQKYR + K
Sbjct: 147 KRKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKH 206
Query: 257 I 257
+
Sbjct: 207 L 207
>gi|326490253|dbj|BAJ84790.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520748|dbj|BAJ92737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 40/148 (27%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM-NVEKLTRENVASHLQKYRLYLK 255
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM N +LTR N+ASHLQKYR + K
Sbjct: 200 RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 259
Query: 256 RISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGR 315
+ + A S + Y GGP R
Sbjct: 260 HLMAREAEAA----------------SWTHKRQMYAAAGGP------------------R 285
Query: 316 LNAPAGLGMH-----GLPSSGMIPMRHA 338
+APAG G G P G +P HA
Sbjct: 286 KDAPAGGGPWVVPTVGFPPPGTMPHPHA 313
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 8 GDQF-PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
G+++ PS +R+L VDDD +LE LL++ Y+VT S A + + K+DLV++
Sbjct: 101 GEEYSPSKVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQKYDLVLT 160
Query: 67 DVHMPDMDGFKLLELVG---LEMDLPVIMLSGNG-DPKLVMKGITHGACDYLLKPVRIEE 122
DV MP + GF LL+ + + ++PVI++SG D K I G D+L KP+ E
Sbjct: 161 DVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKEL 220
Query: 123 LK----NIWQHVVRRKK 135
LK + Q + +RKK
Sbjct: 221 LKKKIDTVLQSIWQRKK 237
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 48 ITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMK 104
+ A ++RE FDLV+++V MP + G +LL + ++PVIM+S V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 105 GITHGACDYLLKPVRIEELKNIWQHVVRR----KKIDAKDQNNSDNQDKPHNGSGQAEG 159
+ GA D+L+KPVR EL+N+WQHV RR + +A + N + N + G+G G
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTG 119
>gi|357632197|ref|ZP_09130075.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
gi|357580751|gb|EHJ46084.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
Length = 453
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +LE L Y V T AL++L K LVISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVL--AKRPVKLVISDIRMPGMDGM 68
Query: 77 KLLELVGLEMD-----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
+LLE EM+ LP+I L+ +G ++ I HGA DYL KP +EL V
Sbjct: 69 RLLE----EMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLTRVTEVF 124
Query: 132 RRKKIDAKDQNNSDNQDKPHNG-SGQAEGM 160
R A + + +D +G GQ+E M
Sbjct: 125 AR----AAGNDATRERDLGESGLVGQSEAM 150
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDDP L +LE +L +Y VT + AL +L ++DLVISD+ MP M G
Sbjct: 710 RLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL--GTGEWDLVISDIMMPQMSG 767
Query: 76 FKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKN 125
++L ++ +LPV++L+ PK + G GA DY+ KP+ RIE L
Sbjct: 768 YELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPIEGMEIKSRIEALTT 827
Query: 126 IWQHVVRRKKIDA 138
I Q V + +++A
Sbjct: 828 IKQSVREQLRLEA 840
>gi|224126555|ref|XP_002329583.1| predicted protein [Populus trichocarpa]
gi|222870292|gb|EEF07423.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV V +LG+D+A+P ++L+LM VE LTR NVASHLQKYR+ +
Sbjct: 307 RKKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLELMKVESLTRHNVASHLQKYRMRRRP 366
Query: 257 I 257
I
Sbjct: 367 I 367
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL VL +D+D + +++ L Y V T AL + F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ +G FK LE DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|386393158|ref|ZP_10077939.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385734036|gb|EIG54234.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 453
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +LE L Y V T AL++L K LVISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVL--AKRPVKLVISDIRMPGMDGM 68
Query: 77 KLLELVGLEMD-----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
+LLE EM+ LP+I L+ +G ++ I HGA DYL KP +EL V
Sbjct: 69 RLLE----EMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLTRVTEVF 124
Query: 132 RRKKIDAKDQNNSDNQDKPHNG-SGQAEGM 160
R A + + +D +G GQ+E M
Sbjct: 125 AR----AAGNDATRERDLGESGLVGQSEAM 150
>gi|302390526|ref|YP_003826347.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
gi|302201154|gb|ADL08724.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
Length = 229
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
SG R+L VDD+ L L++ L + + VT + ALKLL K KFDLV+ D+ MP+
Sbjct: 2 SGYRILVVDDEDKLLDLIKNFLEKEGFAVTCADSGVEALKLL--EKRKFDLVVLDIMMPE 59
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
+ GF +L + ++ +PVI L+ + + G+ G DY+ KP + EL + V+R
Sbjct: 60 VSGFDVLRRIREKIQIPVIFLTARAEEPDKLLGLELGGDDYITKPFSLRELAARIRAVLR 119
Query: 133 RKK 135
R K
Sbjct: 120 RAK 122
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|224126559|ref|XP_002329584.1| pseudo response regulator [Populus trichocarpa]
gi|222870293|gb|EEF07424.1| pseudo response regulator [Populus trichocarpa]
Length = 420
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELH+KFV V +LG+D+A+P ++L+LM VE LTR NVASHLQKYR+ +
Sbjct: 286 RKKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLELMKVESLTRHNVASHLQKYRMRRRP 345
Query: 257 I 257
I
Sbjct: 346 I 346
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GL VL +D+D + +++ L Y V T AL + F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 71 PDMDG-FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ +G FK LE DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|159471197|ref|XP_001693743.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283246|gb|EDP08997.1| predicted protein [Chlamydomonas reinhardtii]
Length = 366
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
N FPS L VL +D D +E L+ Y VT S + A L++ FDL++
Sbjct: 16 ANRPNFPSDLSVLLLDPDFKARQEVEAQLKENNYAVTPCSCSFEAAAHLQDADKHFDLLL 75
Query: 66 SDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
+DV + +V +P++++S +G P VM GI GA D+L KP+ +LKN
Sbjct: 76 ADVRCMQQQSAEHKAVVQAAKSIPLVLMSESGAPNEVMLGIKLGAVDFLEKPLSPLKLKN 135
Query: 126 IWQHVVRR 133
IWQH+VRR
Sbjct: 136 IWQHLVRR 143
>gi|125555252|gb|EAZ00858.1| hypothetical protein OsI_22886 [Oryza sativa Indica Group]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 231
>gi|13940498|gb|AAK50393.1|AF318581_1 putative transcription factor OsGLK1 [Oryza sativa Indica Group]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 238
>gi|125597151|gb|EAZ36931.1| hypothetical protein OsJ_21268 [Oryza sativa Japonica Group]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 231
>gi|75321927|sp|Q5Z5I4.1|GLK1_ORYSJ RecName: Full=Probable transcription factor GLK1; AltName:
Full=Golden2-like protein 1; Short=OsGLK1
gi|54291302|dbj|BAD62070.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|215694412|dbj|BAG89405.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704371|dbj|BAG93805.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 238
>gi|253995418|ref|YP_003047482.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera mobilis JLW8]
gi|253982097|gb|ACT46955.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera mobilis JLW8]
Length = 457
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDD+P+ L LLE LR+ Y T AL+++ N + D V++D+HMP MDG
Sbjct: 8 ILAVDDEPSMLRLLEISLRQAGYQPLTARDGREALEVI--NAQQVDCVVTDLHMPRMDGL 65
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
+LL E+ + +LPVI+++ G+ + + +GA DY+L+P + EL+
Sbjct: 66 QLLKEVRKTDTELPVIIVTAQGEIGSAIDAMKNGASDYILRPFDLAELE 114
>gi|449015491|dbj|BAM78893.1| MYB-related protein [Cyanidioschyzon merolae strain 10D]
Length = 798
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 20/112 (17%)
Query: 198 KKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR- 256
+K R+VW+ +LH +FV AVN +G+D+A+PK ++ LMNVE LT E+V SHLQKYR L+R
Sbjct: 513 RKRRLVWTPQLHERFVKAVNLIGVDQAMPKILVSLMNVEGLTPEHVKSHLQKYRRNLRRA 572
Query: 257 ------ISCVAN------QQANMVAA-------LGSSDPSYLRMSSVNGLGN 289
+ +AN +Q + A LG+S P +L++ ++ G+
Sbjct: 573 KSEQRTVESLANSDTARHEQTQLAATLKDDTEPLGTSSPLHLQLGAIEQPGS 624
>gi|407474743|ref|YP_006789143.1| two-component response regulator [Clostridium acidurici 9a]
gi|407051251|gb|AFS79296.1| two-component response regulator [Clostridium acidurici 9a]
Length = 188
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L V+DD ++ L + +Y +T TS L+ + KNK+DLVI D+ MP+MDG
Sbjct: 4 KILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQ--KNKYDLVIVDIMMPEMDG 61
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVVRRK 134
F L + + ++ D+P++++S K +KG+ GA DY+ KP + EL+ I H+ R K
Sbjct: 62 FTLCKNIRMKSDIPILIMSAKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYK 121
Query: 135 K 135
+
Sbjct: 122 R 122
>gi|297605773|ref|NP_001057583.2| Os06g0348800 [Oryza sativa Japonica Group]
gi|54291303|dbj|BAD62071.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|255677022|dbj|BAF19497.2| Os06g0348800 [Oryza sativa Japonica Group]
Length = 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 150 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 205
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL-QKYRLYLK 255
+KK +V W+ ELHRKFV AV +LG+D+A+P +IL++M VE LTR NVASHL QKYR++ +
Sbjct: 293 RKKMKVDWTPELHRKFVQAVEKLGVDQAIPSRILEVMKVEGLTRHNVASHLQQKYRMHRR 352
Query: 256 RI 257
I
Sbjct: 353 HI 354
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL +D+D +++ L Y V T AL + F + I +V M
Sbjct: 14 FPKGLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHVAIVEVSM 73
Query: 71 PDMD-GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+ FK LE DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSSRSFKFLET---SKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 130 VVRR 133
VV +
Sbjct: 131 VVHK 134
>gi|367475982|ref|ZP_09475406.1| putative response regulator receiver domain protein (CheY-like)
[Bradyrhizobium sp. ORS 285]
gi|365271722|emb|CCD87874.1| putative response regulator receiver domain protein (CheY-like)
[Bradyrhizobium sp. ORS 285]
Length = 310
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDD L LE LL Y V T+S A +LREN + DLVI+D MP MDG
Sbjct: 14 RILIVDDDSFSLSFLEQLLSSLGYLVETSSDGAEAFAMLRENPARADLVITDRIMPVMDG 73
Query: 76 FKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
L + E +PVI+L+G+ + V G+ GA YL KP IE +K+ VV
Sbjct: 74 LALTRRLKREPSTRAMPVILLTGSNIAEDVAAGLDAGAFYYLTKPPSIELVKS----VVE 129
Query: 133 RKKIDAKDQNNSDNQDKPHNGS 154
K + Q N ++ H +
Sbjct: 130 SAKKEVDRQRNVSSRLAVHQAA 151
>gi|359952798|gb|AEV91189.1| MYB-related protein [Triticum aestivum]
Length = 394
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 14/109 (12%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM-NVEKLTRENVASHLQKYRLYLK 255
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM N +LTR N+ASHLQKYR + K
Sbjct: 92 RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 151
Query: 256 RI------SCVANQQANMVAALGSSDPSYLRMSSVNGLGNY--HTVGGP 296
+ + Q+ M AA G R + G G + TVG P
Sbjct: 152 HLMAREAEAASWTQKRQMYAAAGGP-----RKDAAAGGGPWVVPTVGFP 195
>gi|404404789|ref|ZP_10996373.1| signal transduction histidine kinase [Alistipes sp. JC136]
Length = 388
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P +LAVDD T ++LL+ +L R +Y + T S AL+ + E DL++ D+ MP
Sbjct: 8 PEDYTILAVDDIATNIMLLKAVLSRAKYKIVTASGGFEALEKVAEVNP--DLILLDIMMP 65
Query: 72 DMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL----- 123
DMDG+++L+ + + D+PVI L+ +P+ ++KG GA DY+ KP EEL
Sbjct: 66 DMDGYEVLKRLKADPAHEDIPVIFLTALHNPEDIVKGFKFGASDYISKPFNHEELITRVA 125
Query: 124 KNIWQHVVRRKKIDAKD--QNNSDNQDKPHN 152
+I+ +R + +D Q + +DK ++
Sbjct: 126 HHIYLAAAQRTIMQQRDELQATVEARDKMYS 156
>gi|242051445|ref|XP_002454868.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
gi|241926843|gb|EER99987.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
Length = 497
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 199 KPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K +V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 196 KRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGMDCLTRHNIASHLQKYRSHRKHL 254
>gi|451949095|ref|YP_007469690.1| CheY-like receiver and GGDEF domain-containing response regulator
[Desulfocapsa sulfexigens DSM 10523]
gi|451908443|gb|AGF80037.1| CheY-like receiver and GGDEF domain-containing response regulator
[Desulfocapsa sulfexigens DSM 10523]
Length = 312
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L +LAVDD+PT L LLET+L+R ++ V T + A+ +L E+ + D+++ D MP+MD
Sbjct: 9 LSILAVDDNPTTLRLLETMLKRNKFDVRTAVNGVEAMAVLSESHDTIDIILLDRMMPEMD 68
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
G ++ + + +L P+IM + P+ + +GI G YL KP+ +E L +I
Sbjct: 69 GIEVCNAMKADENLRHIPIIMQTAADRPEEISEGIAAGVFYYLTKPLNVEMLLSI 123
>gi|414875562|tpg|DAA52693.1| TPA: golden plant2 [Zea mays]
Length = 459
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 199 KPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
K +V W+ ELHR+FV AV QLGIDKAVP +IL++M + LTR N+ASHLQKYR + K +
Sbjct: 182 KRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKHL 240
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+LA+DD+P LLE LR+ Y AL +LRE DLV+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILREGGA--DLVVSDLHMPVMDG 63
Query: 76 FKLLELVGLE-MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+LL+ + E + +PVI+++ G+ + + GA DY+L+P +E L+ + +
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLEIAIERALSLS 123
Query: 135 KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ 165
++ ++Q + GQ+ M Q
Sbjct: 124 RLKLENQFLREEAHGDDGMVGQSPAMQRVQQ 154
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS + VL V+DD + +L+ C+Y V AL LL N KFDLV+ DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVMLP 62
Query: 72 DMDGFKLLELV----GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
M G +LL+ + +P++M S N + +V ++ GA DYL+KP+++ K +
Sbjct: 63 VMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 128 QHVVRRKKIDAKDQNNSDNQD 148
+HV ++++ + N S QD
Sbjct: 123 RHVWLSRRLE-RTSNKSMWQD 142
>gi|169828266|ref|YP_001698424.1| ethylene receptor [Lysinibacillus sphaericus C3-41]
gi|168992754|gb|ACA40294.1| Ethylene receptor [Lysinibacillus sphaericus C3-41]
Length = 1015
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+P L ++ET+L Y + T + I AL ++ +++DLVISDV MP M G
Sbjct: 683 RILVVDDEPINLRVVETILANEPYDIVTVTSGIEALVCIQ--SHEWDLVISDVMMPKMSG 740
Query: 76 FKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
++L+ L+ + DLPV++L+ P+ + G GA DY+ KPV EL++ +++
Sbjct: 741 YELVRLIRKQFSITDLPVLLLTARSQPQDLENGFLAGANDYVTKPVDALELRSRVAALIK 800
Query: 133 RKK 135
K+
Sbjct: 801 VKR 803
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS +R+L V+DD + +L+ C+Y+V+ AL+ L+++ ++DLV+ DV +P
Sbjct: 3 PSDVRILVVEDDAFTRIATIDILQSCKYNVSAVENGKEALQTLQQSYQQYDLVLCDVMLP 62
Query: 72 DMDGFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
M G +LLE + +P++M S N +V ++ GA DYL+KP+++ K +
Sbjct: 63 CMTGIELLEAIQAHPTRFNHIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 128 QHVVRRKKIDAKDQN-NSDNQDKPHNGSGQAEGMGNSDQNGK-------LNKKRKD 175
+HV ++ + QN +D+ ++ S + + Q GK L K+++D
Sbjct: 123 RHVWLHRQQHSNQQNAQADSSERVPCYSSIWQNLHIIRQIGKGTHGNIMLAKRKED 178
>gi|403381658|ref|ZP_10923715.1| two-component hybrid sensor and regulator [Paenibacillus sp. JC66]
Length = 1052
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +L ++L + ++H+ T S + AL+ R N+ +DL+I DV MP M G+
Sbjct: 725 ILAVDDDPVNLKVLTSILEKDEFHIETASSGVEALE--RLNERPWDLLIVDVMMPYMSGY 782
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKNI 126
+ V E +LPV++L+ P+ + G GA DY+ KPV R+ L +
Sbjct: 783 DFTKRVREEFSISELPVLLLTARSQPQDIYTGFLSGANDYVTKPVDALELQYRVGALVTL 842
Query: 127 WQHVVRRKKIDA 138
Q V R +++A
Sbjct: 843 KQSVKERLRMEA 854
>gi|268316364|ref|YP_003290083.1| Fis family two component sigma-54 specific transcriptional
regulator [Rhodothermus marinus DSM 4252]
gi|262333898|gb|ACY47695.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus DSM 4252]
Length = 472
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ L E L R +T+ A+ A+++L++ + FDLVI+D MPDMDG
Sbjct: 11 ILLVDDEHLLHTLFERLFTRHGLRLTSCYNALQAMEVLKKEADAFDLVITDFKMPDMDGL 70
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+LL + E DL VIM++ + + + ++ + +GA DY+ KP EEL Q + R++
Sbjct: 71 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 130
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+R++ +DDD L+ LRR Y V + +A +L+ + +++DLVISD+ MPDMD
Sbjct: 3 IRIIVIDDDAVACEFLQEALRRADYDVDICT---SARDVLKGDLSRYDLVISDIRMPDMD 59
Query: 75 GFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G +LL + + LPVI+++ G + M+ + GA DY+ KP E ++N+ + V+
Sbjct: 60 GLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVLGM 119
Query: 134 KKIDA-KDQNNSDNQDKPH 151
+++ + Q + +++P
Sbjct: 120 RELQRHRSQGSPAEKEEPR 138
>gi|125525102|gb|EAY73216.1| hypothetical protein OsI_01087 [Oryza sativa Indica Group]
Length = 384
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 253
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM +E LTR N+ASHLQ R +
Sbjct: 211 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQAARKW 267
>gi|159900549|ref|YP_001546796.1| two component transcriptional regulator [Herpetosiphon aurantiacus
DSM 785]
gi|159893588|gb|ABX06668.1| two component transcriptional regulator, winged helix family
[Herpetosiphon aurantiacus DSM 785]
Length = 248
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D P ++L DDDP L L+E L +Y + T S + ALK+ R+ + + L++ DV
Sbjct: 13 DNNPHQRKILVADDDPAILRLVEVALSGQRYQLVTVSNGLEALKMYRDGE--YQLLLIDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MP +DGF + E + D+P+I+++ V+ G GA DY+ KP R EL+ +
Sbjct: 71 MMPYIDGFTVTERIRARSDVPIIIITARDGTDDVVHGFELGADDYITKPFRTAELQARVE 130
Query: 129 HVVRR 133
++RR
Sbjct: 131 AIIRR 135
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L VL V+DD + L+ ++ +LR C + VTT + A+ L + + DLV++D+ MP++D
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 75 GFKLLELVGLE----MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G +L+++V +P+I++S + K GA DYL+KPV+ ++ ++ +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 131 V 131
V
Sbjct: 173 V 173
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+LA+DD+P LLE LR+ Y AL +LRE DLV+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILREGGA--DLVVSDLHMPVMDG 63
Query: 76 FKLLELVGLE-MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+LL+ + E + +PVI+++ G+ + + GA DY+L+P +E L+ + +
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLEIAIERALSLS 123
Query: 135 KIDAKDQ 141
++ ++Q
Sbjct: 124 RLKLENQ 130
>gi|125569682|gb|EAZ11197.1| hypothetical protein OsJ_01047 [Oryza sativa Japonica Group]
Length = 386
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 253
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM +E LTR N+ASHLQ R +
Sbjct: 213 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQAARKW 269
>gi|224285460|gb|ACN40452.1| unknown [Picea sitchensis]
Length = 400
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ +LHR+FV AV QLG++KAVP +IL+LM V LTR N+ASHLQKYR + K
Sbjct: 123 KRKIKVDWTQDLHRRFVQAVEQLGVEKAVPSRILELMGVNCLTRHNIASHLQKYRSHRKH 182
Query: 257 I------SCVANQQANMVAALGS 273
+ + N + + A G+
Sbjct: 183 LLAREAEAATWNHRRQLYATTGT 205
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDD + ++ LL Y VT S A AL R F LVISDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDAAR--LTDFSLVISDVRMPGKDG 67
Query: 76 FKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F LLE V L D VIML+ GD + ++ + +GA DYLLKP ++ +L + + R+
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 135 KID 137
+++
Sbjct: 128 RLE 130
>gi|334136361|ref|ZP_08509829.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333606089|gb|EGL17435.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1054
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDDP L +LET+L +Y VT + AL +L + ++DLVISD+ MP M G+
Sbjct: 719 LLIVDDDPINLQVLETILPPEEYEVTLVTSGKEALAVL--DTKEWDLVISDIMMPQMSGY 776
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKNI 126
+L ++ +LP+++L+ PK + G GA DY+ KPV RIE L I
Sbjct: 777 ELTRIIRKRFTLTELPILLLTARSQPKDIQSGFLAGANDYVTKPVEAIEIKSRIEALTTI 836
Query: 127 WQHVVRRKKIDA 138
Q V + +++A
Sbjct: 837 KQVVREQLQLEA 848
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L +LAVDDD L + L+ YHV+ S AL++L+ N FDL++SDV MP M+
Sbjct: 12 LHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKSG-NTFDLILSDVMMPVMN 70
Query: 75 GFKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G + L+ + +P+IM+S N ++V ++ GA DY++KP+ + LKN++ +V
Sbjct: 71 GPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTPQVLKNMYANVW 130
Query: 132 RRKKIDA 138
++K +A
Sbjct: 131 LKRKQNA 137
>gi|357127777|ref|XP_003565554.1| PREDICTED: probable transcription factor GLK2-like [Brachypodium
distachyon]
Length = 522
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM-NVEKLTRENVASHLQKYRLYLK 255
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM N LTR N+ASHLQKYR + K
Sbjct: 209 RRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGNEYSLTRHNIASHLQKYRSHRK 268
Query: 256 RI------SCVANQQANMVAALGSSDP 276
+ + Q+ M AA P
Sbjct: 269 HLMAREAEAASWTQKRQMYAAAAGVAP 295
>gi|390946584|ref|YP_006410344.1| signal transduction histidine kinase [Alistipes finegoldii DSM
17242]
gi|390423153|gb|AFL77659.1| signal transduction histidine kinase [Alistipes finegoldii DSM
17242]
Length = 392
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P +LAVDD T ++LL+ +L R +Y + T S A++ + +K DL++ D+ MP
Sbjct: 8 PEDYTILAVDDIATNIMLLKAVLSRAKYKIVTASGGYEAIE--KASKETPDLILLDIMMP 65
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL----- 123
D+DG+++++ + + D+PVI L+ +P+ ++KG GA DY+ KP EEL
Sbjct: 66 DLDGYEVIKHLKADPVTQDIPVIFLTALHNPEDIVKGFKLGASDYVSKPFNHEELITRVT 125
Query: 124 KNIWQHVVRRKKIDAKD--QNNSDNQDKPHN 152
+I+ +R + +D Q D +DK ++
Sbjct: 126 HHIYLAAAQRTIMQQRDELQATVDARDKMYS 156
>gi|452972816|gb|EME72643.1| two-component response regulator [Bacillus sonorensis L12]
Length = 222
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDDD L L+ +L + H TT Q+I + + E NK++L++ DV MPD DG
Sbjct: 3 KILAVDDDAAILRLVRKMLS-IKKHEVTTLQSIKDITI--EELNKYNLILLDVMMPDEDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
FK+ E + +D+P+I ++ D ++KG++ G DY++KP I E+
Sbjct: 60 FKICEKIRSLIDIPIIFMTAKSDESSIIKGLSIGGDDYIVKPFSIHEV 107
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA ++L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|346307434|ref|ZP_08849568.1| hypothetical protein HMPREF9457_01277 [Dorea formicigenerans
4_6_53AFAA]
gi|345905525|gb|EGX75263.1| hypothetical protein HMPREF9457_01277 [Dorea formicigenerans
4_6_53AFAA]
Length = 220
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP MDG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGMDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + K ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEEKSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|327399108|ref|YP_004339977.1| putative two component sigma54 specific transcriptional regulator
[Hippea maritima DSM 10411]
gi|327181737|gb|AEA33918.1| putative two component, sigma54 specific, transcriptional regulator
[Hippea maritima DSM 10411]
Length = 386
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDDD + L+ L Y+ T A ALKLL+ KN+FD ++SD+ MP MDG
Sbjct: 3 KILVVDDDEQMRVALKATLDHLGYNPTLAKDAKEALKLLK--KNEFDFILSDLKMPKMDG 60
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L E+ ++ +P +M++ GD K ++ + GA D++LKP + LK I + +
Sbjct: 61 VEFLKEVKNIKPHIPFVMITAFGDIKTAVEAMKLGAFDFILKPFSQDALKKIIEMAISHT 120
Query: 135 KIDAKDQNNSDNQ 147
I Q N Q
Sbjct: 121 SIKQSIQKNPTQQ 133
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 41 VTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSGNG 97
VT + + A KLL + N DL++S+V MP + G LL + ++PVIM+S +
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHD 62
Query: 98 DPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+V K ++ GA D+L+KP+R ELKN+WQHV R+
Sbjct: 63 SMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
>gi|334364766|ref|ZP_08513746.1| response regulator receiver domain protein [Alistipes sp. HGB5]
gi|313159142|gb|EFR58517.1| response regulator receiver domain protein [Alistipes sp. HGB5]
Length = 392
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P +LAVDD T ++LL+ +L R +Y + T S A++ + +K DL++ D+ MP
Sbjct: 8 PEDYTILAVDDIATNIMLLKAVLSRAKYKIVTASGGYEAIE--KASKEAPDLILLDIMMP 65
Query: 72 DMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL----- 123
D+DG+++++ + + D+PVI L+ +P+ ++KG GA DY+ KP EEL
Sbjct: 66 DLDGYEVIKHLKADPATQDIPVIFLTALHNPEDIVKGFKLGASDYVSKPFNHEELITRVT 125
Query: 124 KNIWQHVVRRKKIDAKD--QNNSDNQDKPHN 152
+I+ +R + +D Q D +DK ++
Sbjct: 126 HHIYLAAAQRTIMQQRDELQATVDARDKMYS 156
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS + VL V+DD + +L+ C+Y V AL +L N KFDLV+ DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVMLP 62
Query: 72 DMDGFKLLELV----GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
M G +LL+ + +P++M S N + +V ++ GA DYL+KP+++ K +
Sbjct: 63 VMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 128 QHVVRRKKIDAKDQNNSDNQD 148
+HV ++++ + N S QD
Sbjct: 123 RHVWLSRRLE-RTSNKSMWQD 142
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +++L V+DD L T LR + V T AL L++N +D+++ DV++PD
Sbjct: 5 SKVKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQNP--YDILLLDVNLPD 62
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVV 131
G +LL+ + E+ LP I+LS GD + + +GA DY++KP+ +EEL+ IW +
Sbjct: 63 YSGMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIWVQLG 122
Query: 132 RRKKI 136
+ KI
Sbjct: 123 KNSKI 127
>gi|354581874|ref|ZP_09000777.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200491|gb|EHB65951.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1056
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +L +L YH+TT + L+LL +DL+I+DV MP M G+
Sbjct: 723 ILAVDDDPVNLKVLLGILSSEPYHITTAVSGLEVLELL--GMRTWDLLIADVMMPQMSGY 780
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKNI 126
+L + V +LP+++L+ P+ + G GA DY+ KPV RI L +
Sbjct: 781 ELTQRVREHYSVAELPILLLTARSQPEDIYTGFASGANDYMTKPVDATELKYRIRALIML 840
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPH 151
Q V R +I+A Q +PH
Sbjct: 841 RQSVRERLRIEAA---YLQAQIQPH 862
>gi|42565471|gb|AAS21003.1| cytokinin response regulator 1 protein [Hyacinthus orientalis]
Length = 254
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 154 SGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFV 213
SG + + DQ ++ R ++E E+ EDD+ + K+PR+VW+ +LH + +
Sbjct: 104 SGDPTVLESDDQK---DESRVRRSEAENSEDDQSAR------SLKRPRLVWTPQLHTRLL 154
Query: 214 AAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
V LGI AVPK I+ L LTRENVASHLQKYRLY +
Sbjct: 155 TWVAHLGIKTAVPKTIMQLRMSRGLTRENVASHLQKYRLYFE 196
>gi|145333342|ref|NP_001078405.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|238480814|ref|NP_001154250.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|7576356|dbj|BAA94548.1| pseudo-response regulator 2 [Arabidopsis thaliana]
gi|332658583|gb|AEE83983.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658584|gb|AEE83984.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 487
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 142 NNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE---------DDEDDHNHE 192
N D+QD + S D + ++R D ++E+ E D D H E
Sbjct: 215 NMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKE 274
Query: 193 DPT----------------TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
D T T +K +V W+ ELH+KFV AV QLG+D+A+P +IL+LM V
Sbjct: 275 DETKPINKSSGIKNVSGNKTSRK-KVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVG 333
Query: 237 KLTRENVASHLQKYRLYLKRI 257
LTR NVASHLQK+R + K I
Sbjct: 334 TLTRHNVASHLQKFRQHRKNI 354
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 9 DQFPSGLRVLAV------DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
+ FP GL+VL + D D + + L Y VTT + AL + +N F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 63 LVISDVHM-PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+ I +V+M + + FK LE + LP IM+S + MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 122 ELKNIWQHVVRR 133
+LKNIWQHVV +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|224132880|ref|XP_002327903.1| predicted protein [Populus trichocarpa]
gi|222837312|gb|EEE75691.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
+V W+ ELHR+FV AV QLG+DKAVP +IL+LM ++ LTR N+ASHLQKYR + K +
Sbjct: 2 KVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHL 58
>gi|386812842|ref|ZP_10100067.1| two-component response regulator [planctomycete KSU-1]
gi|386405112|dbj|GAB62948.1| two-component response regulator [planctomycete KSU-1]
Length = 464
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L V+DD L + LL + Y V T + AL L R + +DLVI+D+ MP MDG
Sbjct: 6 KILVVEDDEYVLGSIRILLNKEGYEVNTALNGLEALNLYR--RESYDLVIADLKMPQMDG 63
Query: 76 FKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+LL+ + LE D+ +IM++ G + ++ + GA DY+ KPV EE++ + Q R+
Sbjct: 64 IELLKQLKLEFSDVSLIMMTAYGSIRTAVEAMKMGAYDYVTKPVSAEEIRLVIQRAFERQ 123
>gi|293556317|ref|ZP_06674900.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1039]
gi|291601517|gb|EFF31786.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1039]
Length = 160
Score = 79.0 bits (193), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L +L+I+DV MP+MDG
Sbjct: 3 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKLE--ATHIELIITDVMMPEMDG 60
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L+ L D+PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLVGSLRNARFDMPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KID 137
KI+
Sbjct: 121 KIN 123
>gi|18415009|ref|NP_567548.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|30684266|ref|NP_849403.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|145361326|ref|NP_849404.2| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|334186660|ref|NP_001190759.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|52783226|sp|Q6LA43.2|APRR2_ARATH RecName: Full=Two-component response regulator-like APRR2; AltName:
Full=Pseudo-response regulator 2; AltName: Full=TOC2
protein
gi|14326543|gb|AAK60316.1|AF385725_1 AT4g18020/T6K21_200 [Arabidopsis thaliana]
gi|23506085|gb|AAN28902.1| At4g18020/T6K21_200 [Arabidopsis thaliana]
gi|332658580|gb|AEE83980.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658581|gb|AEE83981.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658582|gb|AEE83982.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658585|gb|AEE83985.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 535
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 142 NNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE---------DDEDDHNHE 192
N D+QD + S D + ++R D ++E+ E D D H E
Sbjct: 215 NMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKE 274
Query: 193 DPT----------------TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
D T T +K +V W+ ELH+KFV AV QLG+D+A+P +IL+LM V
Sbjct: 275 DETKPINKSSGIKNVSGNKTSRK-KVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVG 333
Query: 237 KLTRENVASHLQKYRLYLKRI 257
LTR NVASHLQK+R + K I
Sbjct: 334 TLTRHNVASHLQKFRQHRKNI 354
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 9 DQFPSGLRVLAV------DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
+ FP GL+VL + D D + + L Y VTT + AL + +N F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 63 LVISDVHM-PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+ I +V+M + + FK LE + LP IM+S + MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 122 ELKNIWQHVVRR 133
+LKNIWQHVV +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|408492641|ref|YP_006869010.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
gi|408469916|gb|AFU70260.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
Length = 455
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L +DDDP L LRR Y + T+S + AL++L+ FDLVI+D +P M+G
Sbjct: 3 KILIIDDDPFFNKTLSNYLRRFDYSIETSSSSEEALEILK--TETFDLVITDYRLPKMNG 60
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+L+E + ++PVI+++ D K +K I GA +++ KPV EE K + ++ +
Sbjct: 61 LELIEKIKTHWNIPVILITNYSDIKTAVKSIKLGAFEFVSKPVIPEEFKLVIENALNSPL 120
Query: 136 IDA-KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKL 169
ID+ K++ +S + S + G+S+Q +L
Sbjct: 121 IDSTKERRSSIKKSLSKGASSTSVVKGSSEQAQEL 155
>gi|297800266|ref|XP_002868017.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
gi|297313853|gb|EFH44276.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
Length = 533
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
Query: 140 DQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE---------DDEDDHN 190
+++N ++QD + S D + ++R D ++E+ E D D H
Sbjct: 211 EKDNIEDQDIGESKSVDTTNHKLDDDKVVVKEERGDSEKEEEGETGNLISEKTDSVDIHK 270
Query: 191 HEDPT----------------TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 234
ED T T +K +V W+ ELH+KFV AV QLG+D+A+P +IL+LM
Sbjct: 271 KEDETKPINKSSGIKNVSGNKTSRK-KVDWTPELHKKFVQAVEQLGVDQAIPSRILELMK 329
Query: 235 VEKLTRENVASHLQKYRLYLKRI 257
V LTR NVASHLQK+R + K I
Sbjct: 330 VGTLTRHNVASHLQKFRQHRKNI 352
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 9 DQFPSGLRVLAV------DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
+ FP GL+VL + D D + + L Y VTT + AL + +N+ F
Sbjct: 12 ENFPKGLKVLLLLHGGDSDRDGSSAAETRSKLESMDYIVTTFTDETEALSAVVKNRESFH 71
Query: 63 LVISDVHM-PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+ I +V+ + + FK LE G + LP IM+S + MK I GA ++L KP+ E
Sbjct: 72 VAIVEVNTRAENESFKFLE--GAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 122 ELKNIWQHVVRR 133
+LKNIWQHVV +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 2 TVEHVNGDQF-PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
++E V+ D++ PS + +L VDDD T +L+ LL + Y+VT S A A +L K
Sbjct: 131 SLESVDEDKYCPSSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIYGTTK 190
Query: 61 FDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNG-DPKLVMKGITHGACDYLLK 116
FDLV++DV MP + GF LL+ + ++PVI++SG D K I G D++ K
Sbjct: 191 FDLVLTDVMMPQVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVTK 250
Query: 117 PVRIEELK 124
P+ E LK
Sbjct: 251 PIAKELLK 258
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 41 VTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSGNG 97
V + A L + N DLV+++V MP + G LL + + ++PVIM+S +
Sbjct: 37 VISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSD 96
Query: 98 DPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
D V K ++ GA D+L+KP+R ELKN+WQHV R++
Sbjct: 97 DMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQR 133
>gi|330447454|ref|ZP_08311103.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491645|dbj|GAA05600.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 1114
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+G +L VDD+P L +L LR Y V T AL ++ E + DL++ D+ MP
Sbjct: 702 PNGDLILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRP--DLILLDIMMP 759
Query: 72 DMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
+M G+++ ++ + +LP++MLS G + +KG GA DYL KP EEL Q
Sbjct: 760 EMSGYEVCTILRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 129 HVVRRKKIDAKDQNNSDNQDKPH 151
++ K + + Q N Q + H
Sbjct: 820 AYLQASKTEHEKQKNQSLQQEIH 842
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y A L++ ++ DLV+++V M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVI +S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 129 HVVRR 133
HV RR
Sbjct: 153 HVWRR 157
>gi|206891080|ref|YP_002248567.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743018|gb|ACI22075.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 139
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLR-RCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++L VDD+P L LL +LR + Y +TTT+ I A++L + K FDLVI+D+ MP +D
Sbjct: 4 KILIVDDEPDMLKLLSMILREKTPYEITTTNNPIEAVELAK--KGDFDLVITDLKMPGLD 61
Query: 75 GFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G +LLE V + D+PVI+++ G + I G D++ KP + E++
Sbjct: 62 GLQLLEEVKKRDEDVPVIIITAYGTIDAATEAIEKGGFDFITKPFKKEQI 111
>gi|295913207|gb|ADG57862.1| transcription factor [Lycoris longituba]
Length = 196
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KK +V W+ ELHR FV AV QLG+DKAVP +IL+LM + LTR N+ASHLQKYR + K
Sbjct: 37 KKKAKVDWTPELHRSFVQAVEQLGVDKAVPSRILELMGIVCLTRHNIASHLQKYRSHRKH 96
Query: 257 I 257
+
Sbjct: 97 L 97
>gi|56965768|ref|YP_177502.1| two-component response regulator [Bacillus clausii KSM-K16]
gi|56912014|dbj|BAD66541.1| two-component response regulator [Bacillus clausii KSM-K16]
Length = 226
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VDD+P L L+ T LR+ Y T ALK R ++ DLVI DV M MDGF
Sbjct: 6 VLVVDDEPELLELVVTYLRKESYRALTADNGADALK--RIEQDAVDLVILDVMMEGMDGF 63
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKI 136
+ E + + LPVIML+ G+ ++G+ GA DY++KP +EL + +RR +
Sbjct: 64 HVCERIRQKHSLPVIMLTARGNEADKVRGLKTGADDYMVKPFSPKELMARVEAALRRANM 123
Query: 137 D 137
D
Sbjct: 124 D 124
>gi|282890755|ref|ZP_06299275.1| hypothetical protein pah_c026o086 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175721|ref|YP_004652531.1| hypothetical protein PUV_17270 [Parachlamydia acanthamoebae UV-7]
gi|281499348|gb|EFB41647.1| hypothetical protein pah_c026o086 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480079|emb|CCB86677.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 410
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD P ++L +L + Y V T AL+ L+ K KF LVI+DV+MP MDGF
Sbjct: 9 ILVVDDTPLQAIMLRRVLVQANYDVLTAKNGAEALEFLK--KQKFALVITDVNMPIMDGF 66
Query: 77 KLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKP-------VRIEEL 123
KL ++ +++L PVI+ + P+ ++KGI GA +Y+ KP +RI+EL
Sbjct: 67 KLCRIIKTDLNLRSTPVIICTVLASPEDLIKGIEAGADNYITKPWNNDLLLLRIKEL 123
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 7 NGDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
+GD F S +R+L D+D + TLL C Y VT + L ++
Sbjct: 21 SGDGFIDRSKVRILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVIDALNAEGQHIGII 80
Query: 65 ISDVHMPDMDGFKLLELVGLEMD---LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
++++ +P G K+L+ + + + +PVIM+S + +V+K + GA DYL+KP+R
Sbjct: 81 LAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 140
Query: 122 ELKNIWQHVVRRKKI 136
EL N+W H+ R+++
Sbjct: 141 ELLNLWMHMWGRRRM 155
>gi|90580619|ref|ZP_01236424.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
gi|90438277|gb|EAS63463.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
Length = 1114
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKF 61
+ E N + P G +L VDD+P L +L LR Y V T AL ++++ +
Sbjct: 692 SCESTNLPENPEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQALDIVQQQRP-- 749
Query: 62 DLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
DL++ D+ MP+M G+++ L+ + +LP++MLS G + +KG GA DYL KP
Sbjct: 750 DLILLDIMMPEMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPF 809
Query: 119 RIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 151
EEL Q ++ K + + Q N Q + H
Sbjct: 810 NKEELIARIQAYLQASKTEHEKQKNQSLQQEIH 842
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 7/142 (4%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+Q + VL +D P + L LL+ C Y V I A L + +N+FDL++ D+
Sbjct: 8 EQAKEVINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDL 67
Query: 69 HMPDMDGFKLLELVGL---EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
+P+M G +LL+++ D+PVIM+SG+ + + V + GA DY++KPV ++L+
Sbjct: 68 GLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQG 127
Query: 126 IWQHVVRRKKIDAKDQNNSDNQ 147
+ Q V++K K +NN+ N+
Sbjct: 128 L-QTFVKKK---PKQRNNNQNE 145
>gi|119357584|ref|YP_912228.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium phaeobacteroides
DSM 266]
gi|119354933|gb|ABL65804.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium phaeobacteroides
DSM 266]
Length = 931
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ + ++E ++ R + + + S + AL+L R+N FDLVI+D+ MP+M G
Sbjct: 810 ILFVDDELATIRIMERMMTRIGFKIQSCSSPLQALELFRKNPETFDLVITDLTMPEMTGI 869
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITH-GACDYLLKPVRIEELKNIWQHVVRRK 134
L EL + LP+I+++G G+ M ++ G C L KPV + EL + + V+ K
Sbjct: 870 ALAGELRKISSRLPIILMTGYGEEIETMSSLSLVGICKLLKKPVNMAELISAVKEVILHK 929
Query: 135 K 135
K
Sbjct: 930 K 930
>gi|52078768|ref|YP_077559.1| SpaR [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319648940|ref|ZP_08003149.1| hypothetical protein HMPREF1012_04188 [Bacillus sp. BT1B_CT2]
gi|404487641|ref|YP_006711747.1| two-component response regulator SpaR [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|423680668|ref|ZP_17655507.1| SpaR [Bacillus licheniformis WX-02]
gi|52001979|gb|AAU21921.1| SpaR [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346640|gb|AAU39274.1| two-component response regulator SpaR [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|317388934|gb|EFV69752.1| hypothetical protein HMPREF1012_04188 [Bacillus sp. BT1B_CT2]
gi|383441774|gb|EID49483.1| SpaR [Bacillus licheniformis WX-02]
Length = 220
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAIT-ALKLLRENKNKFDLVISDVHMPDMD 74
++LAVDD+ L+L++ +LRR Q+ V T SQ T +L + + +DL++ DV MP MD
Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVHTLSQVNTESLDVF----SGYDLILLDVMMPGMD 58
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK---NIWQHVV 131
GF+L E + +D P++ L+ + + ++KG+ G DY+ KP + EL N
Sbjct: 59 GFELCEKIRPLVDCPILFLTAKTEEEAIVKGLLTGGDDYISKPFGVLELSARVNAHLRRE 118
Query: 132 RRKKIDAK 139
RR+K + K
Sbjct: 119 RREKYETK 126
>gi|160881336|ref|YP_001560304.1| two component AraC family transcriptional regulator [Clostridium
phytofermentans ISDg]
gi|160430002|gb|ABX43565.1| two component transcriptional regulator, AraC family [Clostridium
phytofermentans ISDg]
Length = 548
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAIT---ALKLLRENKNKFDLVISDVHMP 71
LRVL VDD+P L L+ T +A A++ L+ K K DL+I+D+ MP
Sbjct: 24 LRVLVVDDEPYIKQGLAMLINWMAEGFTIIGEAANGKEAIRFLQ--KTKVDLIIADIKMP 81
Query: 72 DMDGFKLLELVGLEM--DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
+M+G +LLE + E D I+LSG D + I H CDYLLKPV+ +EL
Sbjct: 82 EMNGIELLEYIKKEKLSDASYIILSGYYDFQYARSAIQHNCCDYLLKPVQKDEL----LE 137
Query: 130 VVRRKKIDAKDQNNS--DNQDKPH 151
V+RR +K+ NN +N++K
Sbjct: 138 VLRRVSQKSKELNNRQIENREKER 161
>gi|365538837|ref|ZP_09364012.1| signal transduction histidine kinase-like protein [Vibrio ordalii
ATCC 33509]
Length = 1273
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKF 61
T +N + SG+ +L V+D+PT L+ LLR+C + AL +L+ +F
Sbjct: 919 TFHRINSNDSLSGISILLVEDNPTNRLVATELLRQCGATIIEAEDGFKALDILK--NQQF 976
Query: 62 DLVISDVHMPDMDGFKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
LV+ D+ MP MDG++ + EM LP++ ++ N P+ + G ++ KP
Sbjct: 977 SLVLMDIQMPGMDGYETTRKIRQEMKFHQLPILAMTANARPEDKATSLAAGMNGHIAKPF 1036
Query: 119 RIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNG-KLNK 171
I ++ QH V +K + AK Q + PHN + +D++G KLN+
Sbjct: 1037 EITDVVKKIQHFVTQKNLPAKQQVVA-----PHNQKISTQAQEYADKHGIKLNQ 1085
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRR--CQ-YHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
GL++L V+D+ T L+L+ +L++ CQ + +A+ L L + DL D +
Sbjct: 783 GLKILVVEDNETARLILQDILQKLGCQVFAAPNADEALAQLHHLAQQNEVIDLAFVDWKL 842
Query: 71 PDMDGFKLLELVGLEMDLP----VIMLSGNGDPKLVMKGI--THGACD-YLLKPVRIEEL 123
PDMDG L + + +L VIM++ G +++ K + TH + L+KPV E +
Sbjct: 843 PDMDGLALTRSIKNQENLKKIPLVIMITAFG-LEILDKHLEDTHELLETVLIKPVTPELI 901
Query: 124 K 124
K
Sbjct: 902 K 902
>gi|297810093|ref|XP_002872930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318767|gb|EFH49189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 17/223 (7%)
Query: 8 GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKN-KFDLVIS 66
++F + VL +D D TCL L ++R+C Y V T++A L L+ NK+ K DLV++
Sbjct: 7 SERFSKDICVLLLDSDATCLANLSEMIRKCGYRVVATTRA-EDLPLIINNKDKKIDLVLA 65
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
D + +M+ ++LLE + L ++PV++ S +++ + GA L KP + +LK +
Sbjct: 66 DFRLIEMNKYELLEKIRLICEIPVVV-SDAYVKDAIVECLCRGAKLCLEKPFKENDLKLL 124
Query: 127 WQHVVRRKK-------IDAKDQNNS--DNQ----DKPHNGSGQAEGMGNSDQNGKLNKKR 173
WQ VRR++ I+ ++N+S +NQ + N + E + + KR
Sbjct: 125 WQFTVRRQRDFLSQIDINPPEKNDSITNNQSLGDELKKNNEVETEDLDKFKDELRQGSKR 184
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAV 216
K++ D+D + + N D QKK +++ + L K + AV
Sbjct: 185 KERA-DKDTGEHTEKKNGSDLGDQKKLKLISADALQTKTLEAV 226
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V+ D + ++ LLR C Y V A L++ ++ DLV+++V M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHG-- 95
Query: 75 GFKLLELVGLEM------DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
G ++L+G M D+PVIM+S + V+ +++GA D+L KP+R ELKN+W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 129 HVVRR 133
HV RR
Sbjct: 156 HVWRR 160
>gi|376297804|ref|YP_005169034.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
gi|323460366|gb|EGB16231.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
Length = 123
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL VDD+ L +L LR+ Y VT +++LR+N FD+ + D+ + DMD
Sbjct: 6 IRVLLVDDELGFLEVLAKRLRKRGYAVTAAGSGSEGIRVLRDND--FDVAVLDLKLEDMD 63
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G ++L+++ + +LPVIML+G+G + +G+ GA DYLLKP +++L
Sbjct: 64 GIEVLQIMKKMVPELPVIMLTGHGSEQAAREGVESGAFDYLLKPCDLDDL 113
>gi|326490261|dbj|BAJ84794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 68/144 (47%), Gaps = 40/144 (27%)
Query: 201 RVVWSVELHRKFVAAVNQLGIDKAVPKKILDLM-NVEKLTRENVASHLQKYRLYLKRISC 259
RV W+ ELHR+FV AV QLG+DKAVP +IL+LM N +LTR N+ASHLQKYR + K +
Sbjct: 53 RVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKHLMA 112
Query: 260 VANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAP 319
+ A S + Y GGP R +AP
Sbjct: 113 REAEAA----------------SWTHKRQMYAAAGGP------------------RKDAP 138
Query: 320 AGLGMH-----GLPSSGMIPMRHA 338
AG G G P G +P HA
Sbjct: 139 AGGGPWVVPTVGFPPPGTMPHPHA 162
>gi|298248600|ref|ZP_06972405.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
gi|297551259|gb|EFH85125.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
Length = 1036
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 16 RVLAVDDDPTCLLLLET--LLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
R+L VDDD L L +LR V T+S A+ AL L ++D+V+SD+ MP M
Sbjct: 32 RILLVDDDMAALQALSRTFMLRMSDVDVDTSSSALDALAQL--QSREYDVVVSDIKMPMM 89
Query: 74 DGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
DG +LL + M D+PV++++G+G+ +L M+ + GA DY LKP+
Sbjct: 90 DGIQLLSNIHKRMPDIPVLLITGHGEHELAMQALQEGAYDYTLKPI 135
>gi|417926155|ref|ZP_12569564.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341590005|gb|EGS33256.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
Length = 220
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
G +L VDDD ++ET L+R Q+ V T + A L L + ++FDL+I DV MPDM
Sbjct: 2 GQNILVVDDDEQTRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 74 DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVR-IEELKNIWQHVVR 132
DGF+L V ++D P++ L+ V +G+ G DY+ KP +E + + H+ R
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLALGGDDYIRKPFTPLELVSRVKAHLRR 118
Query: 133 RKKI 136
+++
Sbjct: 119 EERV 122
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ + L+ LL + Y V T + AL+ R K FDLVI+D+ MP M G
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE--RAEKTAFDLVITDIRMPGMSGL 63
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
LL L L+ D+ VIM++ P + + GA DY+ KP ++E+K + + V++++
Sbjct: 64 DLLARLKQLQADIGVIMITAFASPDDAVTAMKSGAFDYITKPFNVDEIKTVIRAVLKKR 122
>gi|425058333|ref|ZP_18461717.1| response regulator receiver domain protein [Enterococcus faecium
504]
gi|403038638|gb|EJY49844.1| response regulator receiver domain protein [Enterococcus faecium
504]
Length = 177
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L +L+I+DV MP+MDG
Sbjct: 20 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKLE--ATHIELIITDVMMPEMDG 77
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L+ L D+PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLVGSLRNARFDMPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|417924814|ref|ZP_12568241.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|417924910|ref|ZP_12568337.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341592111|gb|EGS34997.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341592207|gb|EGS35093.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
Length = 220
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
G +L VDDD ++ET L+R Q+ V T + A L L + ++FDL+I DV MPDM
Sbjct: 2 GQNILVVDDDEQIRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 74 DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVR-IEELKNIWQHVVR 132
DGF+L V ++D P++ L+ V +G+ G DY+ KP +E + + H+ R
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLALGGDDYIRKPFTPLELVSRVKAHLRR 118
Query: 133 RKKI 136
+++
Sbjct: 119 EERV 122
>gi|381149249|gb|AFF60407.1| golden 2-like 1 transcription factor [Solanum phureja]
Length = 460
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL-QKYRLYLK 255
++K +V W+ ELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHL QKYR + K
Sbjct: 171 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQQKYRSHRK 230
Query: 256 RI 257
+
Sbjct: 231 HL 232
>gi|392954660|ref|ZP_10320211.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
gi|391857317|gb|EIT67848.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
Length = 457
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
PS LR+L VDD+ +LE +L R + + A +LLRE FDLVISD+ M
Sbjct: 7 LPS-LRILVVDDEANMRRVLEIMLSRRGHKTVSAGDGQAAFELLREGG--FDLVISDLRM 63
Query: 71 PDMDGFKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
P ++G +LL +L + +P+IM++ G + ++ + GACDYLL+P +E L
Sbjct: 64 PVVNGIELLAKLREAGIGVPLIMITAQGSIESAVEAMRLGACDYLLRPFDVEALDLAINR 123
Query: 130 VVRRKKIDAKDQNNSDNQDKPHNG 153
V+R + + +Q + D+ G
Sbjct: 124 VLRVQGVLDHNQYLREQDDRVWQG 147
>gi|303234315|ref|ZP_07320955.1| putative subtilin biosynthesis regulatory protein SpaR [Finegoldia
magna BVS033A4]
gi|302494568|gb|EFL54334.1| putative subtilin biosynthesis regulatory protein SpaR [Finegoldia
magna BVS033A4]
Length = 220
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
G +L VDDD ++ET L+R Q+ V T + A L L + ++FDL+I DV MPDM
Sbjct: 2 GQNILVVDDDEQIRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 74 DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVR-IEELKNIWQHVVR 132
DGF+L V ++D P++ L+ V +G+ G DY+ KP +E + + H+ R
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLAIGGDDYIRKPFTPLELVSRVKAHLRR 118
Query: 133 RKKI 136
+++
Sbjct: 119 EERV 122
>gi|430826140|ref|ZP_19444331.1| heme response regulator hssR [Enterococcus faecium E0164]
gi|430829088|ref|ZP_19447187.1| heme response regulator hssR [Enterococcus faecium E0269]
gi|430908241|ref|ZP_19485074.1| heme response regulator hssR [Enterococcus faecium E1575]
gi|431746935|ref|ZP_19535747.1| heme response regulator hssR [Enterococcus faecium E2134]
gi|431765184|ref|ZP_19553702.1| heme response regulator hssR [Enterococcus faecium E4215]
gi|430445356|gb|ELA55112.1| heme response regulator hssR [Enterococcus faecium E0164]
gi|430481589|gb|ELA58740.1| heme response regulator hssR [Enterococcus faecium E0269]
gi|430554385|gb|ELA93997.1| heme response regulator hssR [Enterococcus faecium E1575]
gi|430607863|gb|ELB45162.1| heme response regulator hssR [Enterococcus faecium E2134]
gi|430629115|gb|ELB65533.1| heme response regulator hssR [Enterococcus faecium E4215]
Length = 196
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L +L+I+DV MP+MDG
Sbjct: 3 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKLE--ATHIELIITDVMMPEMDG 60
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L+ L D+PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLVGSLRNARFDMPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KID 137
KI+
Sbjct: 121 KIN 123
>gi|209527854|ref|ZP_03276344.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|376006010|ref|ZP_09783358.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|423064997|ref|ZP_17053787.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
gi|209491711|gb|EDZ92076.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|375325627|emb|CCE19111.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|406714240|gb|EKD09408.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
Length = 243
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+ + +LET L Y V T + AL++ R+ + DLV+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFRQTEP--DLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKFDLVISDVHMPDMD 74
RVL VDD+P +L LL + Y V T +AL ++ + FD+VISD+ MP+MD
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 75 GFKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G LLE L + LPVI+L+ +G ++ + GA D+L KP +++ ++ V+
Sbjct: 67 GMALLEALTAEDSSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAVKT 126
Query: 134 KKIDAKDQNNS----DNQDKPHNGSGQA 157
+++ S P SG+A
Sbjct: 127 RRLAGPSAEPSYELVPAAATPEASSGEA 154
>gi|315644147|ref|ZP_07897317.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315280522|gb|EFU43811.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 1048
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDDP L +LE +L +Y VT + L +L + ++DLVISD+ MP M G
Sbjct: 721 RLLIVDDDPVNLQVLEAILPPDEYDVTMATSGKEVLAVL--DAQEWDLVISDIMMPQMSG 778
Query: 76 FKLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKN 125
++L + +LPV++L+ PK + G GA DY+ KPV RIE L
Sbjct: 779 YELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEAIEIRSRIEALTT 838
Query: 126 IWQHVVRRKKIDA 138
I Q V + +++A
Sbjct: 839 IKQTVREQLRLEA 851
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GL++L DD+ +LET L + V S AL+L R ++ DLV+ DV MP
Sbjct: 10 PEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVLDVMMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
++DGF ++E + + ++P+I+L+ GD + G+ GA DY++KP +EL+ + V+
Sbjct: 68 ELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEARIRCVM 127
Query: 132 RR 133
RR
Sbjct: 128 RR 129
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
++ DDDP +L+ +LR+ Y VT + L+LLR+++ DL++ D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+LLE++ +P++M++ D MK + GA DYL KPV E L + V+ +
Sbjct: 65 ELLEMIRASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKRVLDEAE 124
Query: 136 IDAKDQNNSDNQ 147
K+Q D Q
Sbjct: 125 ---KEQQLLDKQ 133
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITAL-KLLRENKNKFDLVISDVHMPDM 73
+ VL +DD L L +L C Y VT A +LL+E+ N D+V+ D+ MP+M
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSN-IDVVLLDLWMPEM 69
Query: 74 DGFKLLELV-GLE--MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
DG++LL L+ E ++PVIM+S + + + V + HGA DYL+KP+RI+ +K I HV
Sbjct: 70 DGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHV 129
Query: 131 VRRKKI 136
+ K+
Sbjct: 130 ISSNKL 135
>gi|209809134|ref|YP_002264672.1| putative response regulator [Aliivibrio salmonicida LFI1238]
gi|208010696|emb|CAQ81083.1| putative response regulator [Aliivibrio salmonicida LFI1238]
Length = 415
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDDP LL + +LL+RC +++ + + A+ +L EN + V+SD MP+MDG
Sbjct: 4 ILVVDDDPVSLLFMSSLLKRCGFNIISAKNGLEAMSILAENPH-IQFVLSDWIMPEMDGI 62
Query: 77 KLL-ELVGLEMD--LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
+L +L +E D + ++LSG D + ++ GI GA D+++K ++EL+
Sbjct: 63 ELCTKLKEIEFDRYIFFVLLSGKNDQRSIIDGINAGADDFIVKGADVKELE 113
>gi|89072496|ref|ZP_01159068.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
gi|89051600|gb|EAR57053.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
Length = 1132
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKF 61
+ E N + P G +L VDD+P L +L LR Y V T A+ ++++ +
Sbjct: 706 SCESTNLPENPEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQAIDIVQQQRP-- 763
Query: 62 DLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
DL++ D+ MP+M G+++ L+ + +LP++MLS G + +KG GA DYL KP
Sbjct: 764 DLILLDIMMPEMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPF 823
Query: 119 RIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 151
EEL Q ++ K + + Q N Q + H
Sbjct: 824 NKEELIARIQAYLQASKTEQEKQRNVTLQQEIH 856
>gi|404497847|ref|YP_006721953.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter metallireducens GS-15]
gi|418067883|ref|ZP_12705213.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter metallireducens RCH3]
gi|78195447|gb|ABB33214.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter metallireducens GS-15]
gi|373558062|gb|EHP84427.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter metallireducens RCH3]
Length = 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
++ VDD P L LLET+L+ Y V +A ALK + KN DLV+ D+ MP MDGF
Sbjct: 10 IMIVDDTPANLRLLETMLQEKNYRVLLFPRADIALKAAK--KNPPDLVLLDITMPGMDGF 67
Query: 77 KLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL-KNIWQHV-V 131
+ + + L PVI LSG +P +K + G DY+ KP ++EE+ + H+ +
Sbjct: 68 QFCASLKADSRLCSTPVIFLSGLNEPADKVKAFSLGGVDYITKPFQLEEVHARVETHLNL 127
Query: 132 RRKKIDAKDQN-NSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKD 175
RR +++ + N N ++Q + + A M KL + R D
Sbjct: 128 RRLQMEVESHNRNLESQVEAYAKEIIASQMATIFALAKLAESRDD 172
>gi|294675080|ref|YP_003575696.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
gi|294473361|gb|ADE82750.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
Length = 1284
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 20/178 (11%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLL-RENKNKFDLVISDVHMPDMD 74
+VL VDDD + L C YH+T + AL+LL E++ +FDLV+SDV MP+MD
Sbjct: 1026 QVLIVDDDEEIGRYIAQELG-CYYHITPVTSGREALRLLLSESEKQFDLVVSDVMMPEMD 1084
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
GF LL ++ M+L PV+ML+ ++G+ GA +L KP ++EL + +++
Sbjct: 1085 GFTLLRMIKTNMNLNHIPVVMLTSKAAVANRLEGLEKGADAFLAKPFDMDELHMVINNLI 1144
Query: 132 R-----RKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDED 184
+ K Q ++KP G+ + + + K+ NE DD D
Sbjct: 1145 STNLRLKGKYSGLQQPKDKIEEKPIKGNDEL----------LMERVLKEVNEHLDDND 1192
>gi|150018635|ref|YP_001310889.1| two component, sigma54 specific, Fis family transcriptional
regulator [Clostridium beijerinckii NCIMB 8052]
gi|149905100|gb|ABR35933.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Clostridium beijerinckii NCIMB 8052]
Length = 472
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL DD+ + ++L+T L + Y V T AL + +EN +D+ I D+ MP++D
Sbjct: 15 VRVLVADDELSLRMVLQTALNKVGYEVDTVKNGKEALCMAQENH--YDVAILDIRMPEVD 72
Query: 75 GFK-LLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G + E+ ++ +LP+I+++ G + + + HGA DY+LKP ++E+K I +R
Sbjct: 73 GLQAFYEIHKIKPNLPIILMTAFGSSETAVNAMKHGAYDYILKPFNLDEVKIIVSRAIRM 132
Query: 134 KKI 136
+++
Sbjct: 133 QQL 135
>gi|56965748|ref|YP_177482.1| hypothetical protein ABC3990 [Bacillus clausii KSM-K16]
gi|56911994|dbj|BAD66521.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDDDP L +LE +L Y VT + AL +L + ++DLVISD MP + G
Sbjct: 282 RILMVDDDPAHLQVLEGILSPEDYDVTMVTSGKEALAML--DAQEWDLVISDTMMPQLSG 339
Query: 76 FKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKN 125
++L L+ ++LPV++L+ K + G GA DY+ KPV RIE L
Sbjct: 340 YELTRLIRKRFTLIELPVLLLTSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTT 399
Query: 126 IWQHVVRRKKIDA 138
I Q V + +++A
Sbjct: 400 IKQMVQEQLRLEA 412
>gi|357010943|ref|ZP_09075942.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 1037
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +L +L YHV T S AL+LL + +DL+I+DV MP M G+
Sbjct: 706 ILAVDDDPVNLKVLVGILSTEPYHVRTVSSGQEALELL--DTEPWDLLIADVMMPHMSGY 763
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVVR 132
+L V +LPV++L+ P + G GA DY+ KPV ELK IW
Sbjct: 764 ELTRRVRTHYSISELPVLLLTARSQPADIYTGFLSGANDYVTKPVDALELKYRIWSLTTL 823
Query: 133 RKKIDAKDQNNS---DNQDKPH 151
++ ++ + + + Q PH
Sbjct: 824 KQSVNERLRMEAAYLQAQIHPH 845
>gi|261410004|ref|YP_003246245.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261286467|gb|ACX68438.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1045
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L +DDDP L +LE +L +Y VT + AL +L + ++DLVISD+ MP M G+
Sbjct: 722 LLIIDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL--DAKEWDLVISDIMMPQMSGY 779
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKNI 126
+L + +LPV++L+ PK + G GA DY+ KPV RIE L I
Sbjct: 780 ELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEIRSRIEALTTI 839
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPH 151
Q V + +++A Q +PH
Sbjct: 840 KQTVREQLRLEAA---WLQAQIQPH 861
>gi|261408948|ref|YP_003245189.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261285411|gb|ACX67382.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1049
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS R+L VDDDP L ++ LL Y + T ++A AL+LL + ++DL+ISDV MP
Sbjct: 716 PSDGRLLIVDDDPVNLKVIHHLLADEGYRIVTVTRAEEALQLL--EQGEWDLIISDVMMP 773
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
M G++L + + +LP+++L+ P+ + G GA DYL+KPV ELK
Sbjct: 774 QMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPVDHLELKT 830
>gi|428773935|ref|YP_007165723.1| LuxR family two component transcriptional regulator [Cyanobacterium
stanieri PCC 7202]
gi|428688214|gb|AFZ48074.1| two component transcriptional regulator, LuxR family
[Cyanobacterium stanieri PCC 7202]
Length = 215
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L +DDDP +LL++ L YHV T SQ AL LL ++ DL+I DV MP+MDG
Sbjct: 11 KLLLIDDDPNLILLVKDYLEFNGYHVLTASQGREALNLL--ERDVPDLIICDVMMPEMDG 68
Query: 76 FKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+ +E + L +PVI LS K ++G+ GA YL+KP EEL
Sbjct: 69 YSFVEEIRQNPLWNQVPVIFLSAKAQTKDKIRGLNTGADVYLVKPFEPEEL 119
>gi|166030722|ref|ZP_02233551.1| hypothetical protein DORFOR_00396 [Dorea formicigenerans ATCC
27755]
gi|166029514|gb|EDR48271.1| response regulator receiver domain protein [Dorea formicigenerans
ATCC 27755]
Length = 220
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP MDG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGMDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|219849054|ref|YP_002463487.1| winged helix family two component transcriptional regulator
[Chloroflexus aggregans DSM 9485]
gi|219543313|gb|ACL25051.1| two component transcriptional regulator, winged helix family
[Chloroflexus aggregans DSM 9485]
Length = 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQ P R+L DDDP+ L++T L QY + + AL+ ++ +FDLV DV
Sbjct: 15 DQPPPKRRILVADDDPSIGRLIQTALPAQQYETVVVANGMEALEAF--DRGQFDLVFLDV 72
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MP +DGF E + + D+P+++++ +++G GA +Y+ KP R+ E +
Sbjct: 73 MMPFVDGFDACERIRAKSDVPIVIITARDGTDDIVQGFRRGADEYITKPFRVAEFVARVE 132
Query: 129 HVVRR 133
++RR
Sbjct: 133 AILRR 137
>gi|303248424|ref|ZP_07334684.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302490222|gb|EFL50140.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 131
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHM 70
GLRVLAVDD+ +ETL++R Y VT + AL+L+ EN++ FD+VI D+ M
Sbjct: 2 GLRVLAVDDEAD---FIETLVKRFTYRQIPVTAAASGAQALELM-ENQD-FDVVILDMRM 56
Query: 71 PDMDGFKLLELVGLEMDL-PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
P MDG +L + L VI+L+G+ + M+G++ GA DY+LKPV EL +
Sbjct: 57 PGMDGMTVLREIKKRHPLVEVIILTGHASVEAGMEGMSLGAYDYVLKPVDFGELLEKARK 116
Query: 130 VVRRKKIDAKDQN 142
RKK++ N
Sbjct: 117 AHERKKLNEARSN 129
>gi|427722918|ref|YP_007070195.1| winged helix family two component transcriptional regulator
[Leptolyngbya sp. PCC 7376]
gi|427354638|gb|AFY37361.1| two component transcriptional regulator, winged helix family
[Leptolyngbya sp. PCC 7376]
Length = 236
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
+ R+L VDDDP L L+ L + Y + + + +A + K DLVI DV++PD
Sbjct: 2 AAARILVVDDDPAILNLIVRFLSQKNYEMESAADGKSAWATFQSFKP--DLVILDVNLPD 59
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
+ G+ L + D+ ++ML+ D ++G + GA DYL KP I EL+ ++R
Sbjct: 60 ILGYALCAQMQEHQDVYILMLTSRTDASDKIRGFSQGADDYLTKPFDILELEYRVGAILR 119
Query: 133 RKKIDAKDQNNSDNQD 148
R++I QNNSD+ D
Sbjct: 120 RQRIAPAAQNNSDSLD 135
>gi|238917580|ref|YP_002931097.1| two-component system OmpR family response regulator ResD
[Eubacterium eligens ATCC 27750]
gi|238872940|gb|ACR72650.1| two-component system, OmpR family, response regulator ResD
[Eubacterium eligens ATCC 27750]
Length = 220
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP MDG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGMDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS +R+L DDD +L LL++ Y+VT A + + + + K+DLV++DV MP
Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMP 216
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNG-DPKLVMKGITHGACDYLLKPVRIEELK--- 124
+ GF LL+ + + +PVI++SG D K I G D+L KP+ E LK
Sbjct: 217 HITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 276
Query: 125 -----NIWQHVVRRKKIDAK 139
+IWQ RRK+ + K
Sbjct: 277 DTVLQSIWQ---RRKEEEYK 293
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +++L VDD P + ++ T+L+ Y++ +T+ AL++++ +F+L++ DV MP+
Sbjct: 5 SQIKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMVK--NIRFNLILLDVMMPE 62
Query: 73 MDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
MDG++++ + + D+P+I L+ GD + V++ GA DYL+KP +EL
Sbjct: 63 MDGYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKPFNPKEL 116
>gi|398814194|ref|ZP_10572876.1| histidine kinase,Response regulator receiver domain protein,
partial [Brevibacillus sp. BC25]
gi|398036954|gb|EJL30160.1| histidine kinase,Response regulator receiver domain protein,
partial [Brevibacillus sp. BC25]
Length = 503
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LA+DDDP L++L+ +L QY +TT + AL LL ++DL+I DV MP M G+
Sbjct: 168 ILAIDDDPVNLMVLDRMLSSSQYQITTCTSPRDALDLL--FTEQWDLLIIDVMMPHMSGY 225
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVVR 132
+L + V +LP+++L+ + V G GA DY+ KPV ELK +W
Sbjct: 226 ELTQRVREHFSVSELPILLLTARSQSEDVYTGYLSGANDYVCKPVDGMELKYRVWSLTTL 285
Query: 133 RKKIDAK 139
++ +D +
Sbjct: 286 KQTVDER 292
>gi|328953201|ref|YP_004370535.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
gi|328453525|gb|AEB09354.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
Length = 698
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P ++L VDD+ L ++ +L Y V S + ALK L K+++DLV+SDV MP
Sbjct: 2 PKSAKILVVDDESAVLEIIRKILVDRGYIVDVASNGLEALKFL--EKSRYDLVLSDVKMP 59
Query: 72 DMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
++DG +LL+ +GL DL +MLS + + I GA DY+ KPV E+L
Sbjct: 60 EIDGLELLQQIGLLYPDLTTVMLSAFATIRDAVAAIKLGAFDYIAKPVYPEDL 112
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+Q + VL +D P + L LL+ C Y V I A L + +N+FDL++ D+
Sbjct: 8 EQAKEIINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDL 67
Query: 69 HMPDMDGFKLLELVGL---EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
+P+M G +LL+++ D+PVIM+SG+ + + V + GA DY++KPV ++L+
Sbjct: 68 GLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQG 127
Query: 126 IWQHVVRRKKIDAKDQN 142
+ V ++ K +QN
Sbjct: 128 LQTFVKKKPKPRNSNQN 144
>gi|315649065|ref|ZP_07902158.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315275500|gb|EFU38855.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 888
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
R+L VDDDP L ++ LL Y +T +QA AL+LL + ++DL+ISDV MP M
Sbjct: 555 FRLLVVDDDPVNLKVIRGLLSGEGYWITVVTQAEEALRLL--EQAEWDLIISDVMMPQMS 612
Query: 75 GFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
G++L + + +LP+++L+ P+ + G GA DYL+KPV ELK
Sbjct: 613 GYELSRRIRQRYMLAELPILLLTARSQPEDIHMGFMSGANDYLIKPVDHLELKT 666
>gi|90413136|ref|ZP_01221132.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum 3TCK]
gi|90325827|gb|EAS42279.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum 3TCK]
Length = 1117
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKF 61
T E+ N + P G +L VDD+P L +L LR Y V T ALK++ + +
Sbjct: 696 TCENENLPENPDGELLLVVDDEPVNLQVLNNFLRLEGYRVLTADSGPQALKIIEQQQPA- 754
Query: 62 DLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
L++ D+ MP+M G+++ ++ E ++LP+IMLS G + +KG GA DYL KP
Sbjct: 755 -LILLDIMMPEMSGYEVCHILREEHSLIELPIIMLSALGQVQDRIKGFESGANDYLTKPF 813
Query: 119 RIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 151
EEL ++ K + + Q N+ Q + H
Sbjct: 814 NKEELIARISAHLQAGKTEVQRQKNAALQQEIH 846
>gi|314950224|ref|ZP_07853508.1| response regulator receiver domain protein [Enterococcus faecium
TX0082]
gi|389867619|ref|YP_006375042.1| response regulator [Enterococcus faecium DO]
gi|424793470|ref|ZP_18219577.1| putative heme response regulator HssR [Enterococcus faecium V689]
gi|424796426|ref|ZP_18222157.1| putative heme response regulator HssR [Enterococcus faecium S447]
gi|424848096|ref|ZP_18272619.1| putative heme response regulator HssR [Enterococcus faecium R501]
gi|424913413|ref|ZP_18336780.1| putative heme response regulator HssR [Enterococcus faecium R497]
gi|424951930|ref|ZP_18366982.1| putative heme response regulator HssR [Enterococcus faecium R496]
gi|424954962|ref|ZP_18369831.1| putative heme response regulator HssR [Enterococcus faecium R494]
gi|424956963|ref|ZP_18371717.1| putative heme response regulator HssR [Enterococcus faecium R446]
gi|424961188|ref|ZP_18375645.1| putative heme response regulator HssR [Enterococcus faecium P1986]
gi|424965408|ref|ZP_18379392.1| putative heme response regulator HssR [Enterococcus faecium P1190]
gi|424967078|ref|ZP_18380814.1| putative heme response regulator HssR [Enterococcus faecium P1140]
gi|424972781|ref|ZP_18386102.1| putative heme response regulator HssR [Enterococcus faecium P1139]
gi|424974008|ref|ZP_18387262.1| putative heme response regulator HssR [Enterococcus faecium P1137]
gi|424979190|ref|ZP_18392052.1| putative heme response regulator HssR [Enterococcus faecium P1123]
gi|424980040|ref|ZP_18392859.1| putative heme response regulator HssR [Enterococcus faecium ERV99]
gi|424984956|ref|ZP_18397466.1| putative heme response regulator HssR [Enterococcus faecium ERV69]
gi|424988660|ref|ZP_18400965.1| putative heme response regulator HssR [Enterococcus faecium ERV38]
gi|424996169|ref|ZP_18407989.1| putative heme response regulator HssR [Enterococcus faecium ERV168]
gi|425001214|ref|ZP_18412736.1| putative heme response regulator HssR [Enterococcus faecium ERV161]
gi|425005630|ref|ZP_18416854.1| putative heme response regulator HssR [Enterococcus faecium ERV102]
gi|425008739|ref|ZP_18419806.1| putative heme response regulator HssR [Enterococcus faecium ERV1]
gi|425012341|ref|ZP_18423161.1| putative heme response regulator HssR [Enterococcus faecium E422]
gi|425015426|ref|ZP_18426049.1| putative heme response regulator HssR [Enterococcus faecium E417]
gi|425018088|ref|ZP_18428562.1| putative heme response regulator HssR [Enterococcus faecium C621]
gi|425021352|ref|ZP_18431611.1| putative heme response regulator HssR [Enterococcus faecium C497]
gi|425023682|ref|ZP_18433785.1| putative heme response regulator HssR [Enterococcus faecium C1904]
gi|425033378|ref|ZP_18438348.1| putative heme response regulator HssR [Enterococcus faecium 515]
gi|425039948|ref|ZP_18444445.1| putative heme response regulator HssR [Enterococcus faecium 513]
gi|425047118|ref|ZP_18451094.1| putative heme response regulator HssR [Enterococcus faecium 510]
gi|425062372|ref|ZP_18465533.1| putative heme response regulator HssR [Enterococcus faecium 503]
gi|313643451|gb|EFS08031.1| response regulator receiver domain protein [Enterococcus faecium
TX0082]
gi|388532868|gb|AFK58060.1| response regulator [Enterococcus faecium DO]
gi|402916160|gb|EJX37064.1| putative heme response regulator HssR [Enterococcus faecium V689]
gi|402918277|gb|EJX38987.1| putative heme response regulator HssR [Enterococcus faecium R501]
gi|402923091|gb|EJX43419.1| putative heme response regulator HssR [Enterococcus faecium S447]
gi|402927018|gb|EJX47009.1| putative heme response regulator HssR [Enterococcus faecium R497]
gi|402928384|gb|EJX48250.1| putative heme response regulator HssR [Enterococcus faecium R496]
gi|402935293|gb|EJX54554.1| putative heme response regulator HssR [Enterococcus faecium R494]
gi|402943715|gb|EJX62183.1| putative heme response regulator HssR [Enterococcus faecium P1190]
gi|402944517|gb|EJX62923.1| putative heme response regulator HssR [Enterococcus faecium P1986]
gi|402944786|gb|EJX63179.1| putative heme response regulator HssR [Enterococcus faecium R446]
gi|402952683|gb|EJX70466.1| putative heme response regulator HssR [Enterococcus faecium P1139]
gi|402955113|gb|EJX72676.1| putative heme response regulator HssR [Enterococcus faecium P1140]
gi|402957551|gb|EJX74937.1| putative heme response regulator HssR [Enterococcus faecium P1137]
gi|402959155|gb|EJX76431.1| putative heme response regulator HssR [Enterococcus faecium P1123]
gi|402967484|gb|EJX84034.1| putative heme response regulator HssR [Enterococcus faecium ERV69]
gi|402967539|gb|EJX84083.1| putative heme response regulator HssR [Enterococcus faecium ERV99]
gi|402971263|gb|EJX87548.1| putative heme response regulator HssR [Enterococcus faecium ERV38]
gi|402974469|gb|EJX90517.1| putative heme response regulator HssR [Enterococcus faecium ERV168]
gi|402985522|gb|EJY00724.1| putative heme response regulator HssR [Enterococcus faecium ERV102]
gi|402987128|gb|EJY02218.1| putative heme response regulator HssR [Enterococcus faecium ERV161]
gi|402991784|gb|EJY06533.1| putative heme response regulator HssR [Enterococcus faecium ERV1]
gi|402993542|gb|EJY08141.1| putative heme response regulator HssR [Enterococcus faecium E422]
gi|402995696|gb|EJY10136.1| putative heme response regulator HssR [Enterococcus faecium E417]
gi|403002985|gb|EJY16912.1| putative heme response regulator HssR [Enterococcus faecium C621]
gi|403006942|gb|EJY20549.1| putative heme response regulator HssR [Enterococcus faecium C497]
gi|403009033|gb|EJY22507.1| putative heme response regulator HssR [Enterococcus faecium C1904]
gi|403010008|gb|EJY23416.1| putative heme response regulator HssR [Enterococcus faecium 515]
gi|403014063|gb|EJY27082.1| putative heme response regulator HssR [Enterococcus faecium 513]
gi|403022536|gb|EJY34895.1| putative heme response regulator HssR [Enterococcus faecium 510]
gi|403038601|gb|EJY49808.1| putative heme response regulator HssR [Enterococcus faecium 503]
Length = 239
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 20 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 77
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|86606063|ref|YP_474826.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
gi|86554605|gb|ABC99563.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
Length = 243
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+ + +LET L Y V T + AL++ R K DLV+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFR--KQDPDLVVLDVMMPKLDG 65
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|86609993|ref|YP_478755.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558535|gb|ABD03492.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 246
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+ + +LET L Y V T S AL++ +K DLV+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTASDGEEALEVF--HKQDPDLVVLDVMMPKLDG 65
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVA 125
Query: 136 IDAKD 140
A D
Sbjct: 126 RSAHD 130
>gi|303246663|ref|ZP_07332941.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
gi|302492003|gb|EFL51881.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
Length = 459
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDDDP L +LE L Y V T AL++L + L+ISD+ MP MDG
Sbjct: 13 ILAVDDDPHILEVLEVRLVSAGYDVVTAEDGTEALEIL--SSRPVRLLISDIRMPGMDGM 70
Query: 77 KLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+L E +V + LP+I L+ +G ++ I HGA DYL KP +EL + V R
Sbjct: 71 RLQEEMVRRGLSLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLSRVAEVFAR 128
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS + +L VDDD +LE+ L++ +Y+VT + A +L K+DLV++DV MP
Sbjct: 178 PSKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTDVMMP 237
Query: 72 DMDGFKLLELVGLEMDL---PVIMLSGNG-DPKLVMKGITHGACDYLLKPVRIEELKNIW 127
++ GF LL+ + ++ PVI++SG D K I G D+L KP+ E LK
Sbjct: 238 NISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQDFLTKPIAKELLK--- 294
Query: 128 QHVVRRKKIDA 138
KKID
Sbjct: 295 ------KKIDT 299
>gi|288556695|ref|YP_003428630.1| two-component response regulator [Bacillus pseudofirmus OF4]
gi|288547855|gb|ADC51738.1| two-component response regulator [Bacillus pseudofirmus OF4]
Length = 230
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L +DD+ LLE ++ Y + T S AI A L NK L++ D+ MP+M G
Sbjct: 3 KILIIDDEREMQKLLELCIQSSSYDIRTLSSAIEAEFYL--NKEDIHLILLDIMMPEMTG 60
Query: 76 FKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
F+ L+L+ L+ ++PVI+++ D + V+KG+ GA D++ KP ELK Q V++R
Sbjct: 61 FEFLKLINELQKEIPVILITAMDDTEAVVKGLELGAYDFITKPFEPRELKARVQSVIKR 119
>gi|242093738|ref|XP_002437359.1| hypothetical protein SORBIDRAFT_10g025510 [Sorghum bicolor]
gi|241915582|gb|EER88726.1| hypothetical protein SORBIDRAFT_10g025510 [Sorghum bicolor]
Length = 111
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 6 VNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAITALKLLRENK---NKF 61
++ +F +GLR+L VD+D L++L+ +L+ C Y +VT + TAL +LRE K ++F
Sbjct: 1 MDAARFRAGLRMLTVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQF 60
Query: 62 DLVISDVHMPD--MDGFKLLELVGLEMDLPVIMLS 94
DLVISD +P+ ++ K LELV +EMD+PVI +S
Sbjct: 61 DLVISDFFIPNNGINSLKFLELVAVEMDIPVIGIS 95
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ VL +DD L L +L C Y VT A L + + D+V+ D++MP+MD
Sbjct: 3 IHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPEMD 62
Query: 75 GFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF+LL L+ +L PVIM+S + + + V I GA DY+ KP+R++ +K I ++V
Sbjct: 63 GFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKYV 121
>gi|317130175|ref|YP_004096457.1| winged helix family two component transcriptional regulator
[Bacillus cellulosilyticus DSM 2522]
gi|315475123|gb|ADU31726.1| two component transcriptional regulator, winged helix family
[Bacillus cellulosilyticus DSM 2522]
Length = 230
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ LL+ + + S A L+ +N +DL+I D+ MP++DG
Sbjct: 4 KILLVDDEQEMRKLLKVCFSASPFQLDEASNGDEAF--LKVQENNYDLIILDIMMPEIDG 61
Query: 76 FKLLELVGLEMD--LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
F+LL ++ +E+D +PVI+L+ GD + V++G+ GA DY++KP +EL + V+RR
Sbjct: 62 FELLNMLRVELDTEIPVILLTALGDTERVVEGLKRGADDYVVKPFEPKELVARVESVLRR 121
Query: 134 KK 135
K
Sbjct: 122 SK 123
>gi|452820793|gb|EME27831.1| myb family transcription factor [Galdieria sulphuraria]
Length = 552
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 199 KPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
K R++W+ ELH +F+ AVN +G++ AVPK IL LMNVE LT E+V SHLQKYR LK+ +
Sbjct: 324 KKRLIWTPELHDRFLKAVNAVGVNNAVPKTILYLMNVEGLTSEHVKSHLQKYRNNLKKAA 383
Query: 259 C 259
Sbjct: 384 A 384
>gi|424992083|ref|ZP_18404180.1| putative heme response regulator HssR [Enterococcus faecium ERV26]
gi|402974729|gb|EJX90752.1| putative heme response regulator HssR [Enterococcus faecium ERV26]
Length = 239
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 20 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 77
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KI 136
KI
Sbjct: 138 KI 139
>gi|15614827|ref|NP_243130.1| two-component response regulator [Bacillus halodurans C-125]
gi|10174883|dbj|BAB05983.1| two-component response regulator [Bacillus halodurans C-125]
Length = 231
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL VDD+ +L+ + Y V T + + A+ L+ FDLV+ D+ +PD+DG
Sbjct: 4 RVLVVDDEKKMQVLITVCVSEAGYLVQTAASGLAAMDRLK--AEPFDLVLLDIMLPDVDG 61
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F L+ +L L+ D+ +IML+ G+ + +++G+ GA DY++KP +EL V+RRK
Sbjct: 62 FSLIAQLRHLQEDVAIIMLTALGETEHIVRGLNEGADDYIVKPFEPDELNARILSVLRRK 121
>gi|410464065|ref|ZP_11317534.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409982822|gb|EKO39242.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 130
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHM 70
GLRVLAVDD+ +ETL++R Y VT AL LL + FD+VI D+ M
Sbjct: 2 GLRVLAVDDEAD---FIETLVKRFTYRQIPVTAAGNGPDALALLE--RESFDVVILDMRM 56
Query: 71 PDMDGFKLLELVGLEMDL-PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
P MDG +L+ + L VI+L+G+ + M+G++ GA DY+LKPV EL +
Sbjct: 57 PGMDGLAVLQEIKKRHPLVEVIILTGHASVESGMQGMSLGAYDYVLKPVDFGELLEKAKK 116
Query: 130 VVRRKKID 137
RKK++
Sbjct: 117 AYERKKLN 124
>gi|350566097|ref|ZP_08934797.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
gi|348663121|gb|EGY79734.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
Length = 232
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
++ +DDD L++ L Y+V + + K +R N N L++ D+ +PD DGF
Sbjct: 4 IIIIDDDVVLCNLIKKCLSTDGYYVDIANNGLEGYKKIR-NSNNLCLILLDIMLPDFDGF 62
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
++LE++ E +PV+ML+ D + G+ GA DYL KP I ELK + +VRR
Sbjct: 63 QVLEMIREEYTVPVLMLTAKSDDDSKIYGLKQGADDYLTKPFNINELKARVEAMVRR 119
>gi|325108669|ref|YP_004269737.1| Fis family transcriptionel regulator [Planctomyces brasiliensis DSM
5305]
gi|324968937|gb|ADY59715.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Planctomyces brasiliensis DSM 5305]
Length = 462
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDD L + LR+ Y T + A+ +RE F++VI DVH+PD DGF
Sbjct: 8 LLVVDDDKFILEAMADYLRKLGYRTETAATCGEAMDRMREFP--FEVVICDVHLPDQDGF 65
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+LLE E + VIML+G G + ++ I GA DYL KPV +EL Q + ++K
Sbjct: 66 QLLEWASKEQPETSVIMLTGYGTIESAVEAIRIGAFDYLTKPVIDDELNLSIQRALGQRK 125
Query: 136 IDAKDQNNSDNQDKPH 151
I ++++ D+ +
Sbjct: 126 IVEENKSLRKQLDQKY 141
>gi|254432325|ref|ZP_05046028.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
gi|197626778|gb|EDY39337.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
Length = 253
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ + +LET L Y V T S + AL+ RE+ DLV+ DV MP +DG+
Sbjct: 16 ILVVDDEASIRRILETRLSMIGYQVVTASDGMEALECFRESHP--DLVVLDVMMPKLDGY 73
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + E D+P++ML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 74 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRR 130
>gi|289524120|ref|ZP_06440974.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502776|gb|EFD23940.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 228
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL DDD + L L +L +Y V T S I A+ L + FDLVI DV MP +D
Sbjct: 2 MRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDAV--FDLVILDVMMPHID 59
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LLE + G+ ++PV+ML+ GD + +KG+ GA DYL KP I+EL + ++
Sbjct: 60 GLSLLEQIRKGGI--NIPVLMLTAKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALL 117
Query: 132 RR 133
RR
Sbjct: 118 RR 119
>gi|197301304|ref|ZP_03166389.1| hypothetical protein RUMLAC_00035 [Ruminococcus lactaris ATCC
29176]
gi|197299622|gb|EDY34137.1| response regulator receiver domain protein [Ruminococcus lactaris
ATCC 29176]
Length = 220
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP MDG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGMDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|323490769|ref|ZP_08095971.1| two-component response regulator [Planococcus donghaensis MPA1U2]
gi|323395651|gb|EGA88495.1| two-component response regulator [Planococcus donghaensis MPA1U2]
Length = 218
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 18 LAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFK 77
+ VDD+ L L+ LR Y T + AL+LL+ K FDLV+ D+ MPDMDG++
Sbjct: 1 MLVDDEKRMLDLVALYLRPHHYVCTKAANGYQALELLK--KESFDLVLLDIMMPDMDGWE 58
Query: 78 LLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + D+P+IML+ + V+KG+ GA DY+ KP EEL + V+RR
Sbjct: 59 VCRDIRKFSDIPIIMLTAREQQEDVVKGLRLGADDYMTKPFGEEELLARMEAVLRR 114
>gi|433543469|ref|ZP_20499875.1| sensory transduction protein [Brevibacillus agri BAB-2500]
gi|432185280|gb|ELK42775.1| sensory transduction protein [Brevibacillus agri BAB-2500]
Length = 233
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L V+DDP ++ LRR YHVT ++ + + K +DLV+ D+ +P+MDGF
Sbjct: 5 LLLVEDDPEIARVVRDTLRRENYHVTWSTSGLEGWEDFL--KQSYDLVLVDLMLPEMDGF 62
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
L + + + D+P++++S + ++ +KG+ GA DYL KP + ELK + ++RR +
Sbjct: 63 DLCKNIRWKSDVPILIISARKEDEVKVKGLHLGADDYLTKPFSLAELKARVESLLRRWR 121
>gi|309790146|ref|ZP_07684718.1| two component transcriptional regulator [Oscillochloris trichoides
DG-6]
gi|308227731|gb|EFO81387.1| two component transcriptional regulator [Oscillochloris trichoides
DG6]
Length = 245
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L DDDP+ L++ L+ +Y + + + ALK K FD+VI DV MP +DG
Sbjct: 20 RILIADDDPSIAALIQVTLKDPRYEIIAVANGLEALKAF--EKQPFDVVILDVMMPYVDG 77
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
F+ E + + D+P+++L+ + V+ G GA DY+ KP + EL + ++RR
Sbjct: 78 FEACERIRAQSDVPIVILTSRDGTEDVVHGFELGADDYITKPFKTVELIARVESILRR 135
>gi|148658695|ref|YP_001278900.1| two component transcriptional regulator [Roseiflexus sp. RS-1]
gi|148570805|gb|ABQ92950.1| two component transcriptional regulator, winged helix family
[Roseiflexus sp. RS-1]
Length = 245
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L DDDP+ +L++ L+ +Y + + ALK N++KFD+VI DV MP +DG
Sbjct: 20 RILIADDDPSIAMLIQVTLKDPRYEIVAVKNGLEALKAF--NESKFDVVILDVMMPYVDG 77
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
F+ + + D+P+I+L+ ++ G GA DY+ KP + EL ++RR
Sbjct: 78 FEACQRIRERSDVPIIILTARDGTDDIVHGFELGADDYITKPFKTAELIARVDAILRR 135
>gi|376296117|ref|YP_005167347.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
gi|323458678|gb|EGB14543.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
Length = 132
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL VDD+P L L++ L + HV T + AL LRE N D+VI DV MP +
Sbjct: 4 IRVLVVDDEPDFLKLIQRRLTKRNVHVDTVTNGEAALAFLRE--NPVDVVILDVRMPGLS 61
Query: 75 GFKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G L E+ D VIML+G+G + ++GI+ GA DY+LKP I+ L
Sbjct: 62 GIDTLKEIRKRFRDTEVIMLTGHGSLQSGIEGISLGAYDYILKPFSIDNL 111
>gi|406893623|gb|EKD38639.1| hypothetical protein ACD_75C00664G0001 [uncultured bacterium]
Length = 302
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R++ VDD+ +L L Y V T +I A+K RE+ DLV++D+ MPDM G
Sbjct: 178 RIMVVDDEAAVAEVLRISLEGVGYRVLTFHGSIAAVKKFREDPGCCDLVLTDMLMPDMTG 237
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+L E +GL LP+IML+G+GD + + G ++L KPV+ E+L Q +VRR
Sbjct: 238 AELAREFLGLRPGLPIIMLTGHGDTFDLSRAKKIGIREFLQKPVKQEKL----QQIVRRV 293
Query: 135 KIDAKDQNN 143
+ KD ++
Sbjct: 294 LGNGKDTDH 302
>gi|186685580|ref|YP_001868776.1| response regulator receiver modulated translation initiation factor
IF-2 [Nostoc punctiforme PCC 73102]
gi|186468032|gb|ACC83833.1| response regulator receiver modulated translation initiation factor
IF-2 [Nostoc punctiforme PCC 73102]
Length = 522
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Query: 5 HVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
++ Q PS +R+LAVDD L+L++T+L Y + + TAL L++E+ DL+
Sbjct: 247 NLTSSQLPSTVRILAVDDVADNLILIQTVLESEGYQIDLAADGTTALSLVKESPP--DLI 304
Query: 65 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
I DV MP+MDG+++ + +L P++++S + V++G+ GA D++ KP+ ++
Sbjct: 305 ILDVKMPEMDGYEVTRRIRNNHNLPYIPILLISAYFEAS-VVQGLDIGANDFIRKPIDVD 363
Query: 122 ELKNIWQHVVRRKKIDAKDQNNSDN 146
EL + ++R KK+ K D
Sbjct: 364 ELLARVRSLLRLKKMIGKSDKIEDT 388
>gi|451340866|ref|ZP_21911349.1| putative two-component system response regulator [Amycolatopsis
azurea DSM 43854]
gi|449416242|gb|EMD21995.1| putative two-component system response regulator [Amycolatopsis
azurea DSM 43854]
Length = 256
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRC--QYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
GLRVLAVDD P L L +LLR V A++ALKLL + FD V D+ MP
Sbjct: 4 GLRVLAVDDVPPALDELCSLLREAPEVAEVVAAGDALSALKLL--QGSHFDAVFLDISMP 61
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMK-GITHGACDYLLKPVRIEELKNIWQHV 130
+DG +L L+ + PVI+ D V GI GA DYLLKPVR E L V
Sbjct: 62 GLDGLELASLLARLSEPPVIVFVTAHDGHAVAAYGI--GAVDYLLKPVRAERLSAALSKV 119
Query: 131 VRRKKIDAKDQNNSDNQDKP 150
VR N D + KP
Sbjct: 120 VRMA-------GNQDGEPKP 132
>gi|350267588|ref|YP_004878895.1| subtilin biosynthesis regulatory protein SpaR [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|340561924|gb|AEK64499.1| EtnR [Bacillus subtilis subsp. spizizenii]
gi|349600475|gb|AEP88263.1| subtilin biosynthesis regulatory protein SpaR [Bacillus subtilis
subsp. spizizenii TU-B-10]
Length = 220
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+ L+L++ +LRR Q+ V T + L + +DL++ DV MPD+DG
Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVDTLDRVKGQPPDLFQG---YDLILLDVMMPDIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
F+L + + +D P++ L+ + + ++KG+ G DY+ KP + EL +RR++
Sbjct: 60 FELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHLRRER 119
Query: 136 ID 137
D
Sbjct: 120 RD 121
>gi|153853493|ref|ZP_01994873.1| hypothetical protein DORLON_00862 [Dorea longicatena DSM 13814]
gi|149753648|gb|EDM63579.1| response regulator receiver domain protein [Dorea longicatena DSM
13814]
Length = 220
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRILVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|154484426|ref|ZP_02026874.1| hypothetical protein EUBVEN_02139 [Eubacterium ventriosum ATCC
27560]
gi|149734903|gb|EDM50820.1| response regulator receiver domain protein [Eubacterium ventriosum
ATCC 27560]
gi|291551280|emb|CBL27542.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Ruminococcus torques
L2-14]
Length = 220
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRILVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|295108183|emb|CBL22136.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Ruminococcus obeum
A2-162]
Length = 220
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK-NIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ I H+ R
Sbjct: 60 FELCKKIRTLVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARIHAHLRREH 119
Query: 135 K 135
+
Sbjct: 120 R 120
>gi|413947880|gb|AFW80529.1| hypothetical protein ZEAMMB73_376666 [Zea mays]
Length = 349
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 52 KLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGAC 111
+LLRE K++FDLVIS+VHMPDMDGFKLLELVGLEMDLP I + N P ++ +
Sbjct: 152 ELLREKKDQFDLVISNVHMPDMDGFKLLELVGLEMDLPGITSAQNPIPIDMVLLL----- 206
Query: 112 DYLLKPVR 119
DY L P R
Sbjct: 207 DYALVPAR 214
>gi|302337934|ref|YP_003803140.1| nitrogen specific signal transduction histidine kinase NtrB
[Spirochaeta smaragdinae DSM 11293]
gi|301635119|gb|ADK80546.1| signal transduction histidine kinase, nitrogen specific, NtrB
[Spirochaeta smaragdinae DSM 11293]
Length = 900
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VDD+ L +L C Y VTT S A++LLR+ +++D+ + D+ MP+ G
Sbjct: 775 VLFVDDEEMLLSNGSAMLHACGYEVTTASSGKNAMELLRKAPDRYDIAVVDIIMPEFSGL 834
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+ L+ + E+ LPVI+ SGN + + +GI GA +L KP IE L ++ ++ +
Sbjct: 835 ECLKAIQKEVPSLPVILTSGNSGDEQISEGIEAGAAAFLPKPYSIETLSSLIADTLKPRL 894
Query: 136 I 136
I
Sbjct: 895 I 895
>gi|328952250|ref|YP_004369584.1| multi-sensor hybrid histidine kinase [Desulfobacca acetoxidans DSM
11109]
gi|328452574|gb|AEB08403.1| multi-sensor hybrid histidine kinase [Desulfobacca acetoxidans DSM
11109]
Length = 822
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L VDD+P L++ LL+R Y VT + + ALK+ + N + FDLVI+D+ MP + G
Sbjct: 701 RILVVDDEPPIADLVQQLLQRLGYQVTAVTNSQEALKIFQANPDAFDLVITDLTMPHLTG 760
Query: 76 FKL-LELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
+L +++ DLP+I+ SG D + + G +YL+KP+
Sbjct: 761 LELSRKILQRRADLPIILCSGYSDITVAAEMRKIGIKEYLMKPI 804
>gi|256840897|ref|ZP_05546405.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
gi|256738169|gb|EEU51495.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
Length = 374
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+ S +VL VDD PT ++L++ +L++ Y + T AL++ N+ +L++ D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRI--ANEKHPNLILLDI 59
Query: 69 HMPDMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
MP+MDG+++L+ + D+PVI++S D + ++KG GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREELVK 119
Query: 126 IWQH---VVRRKKIDAKDQNNSDNQDKPHN 152
H + K+I A+ +N +++D ++
Sbjct: 120 RVAHRYELYSIKRIKAELENTIESRDTLYS 149
>gi|314939668|ref|ZP_07846893.1| response regulator receiver domain protein [Enterococcus faecium
TX0133a04]
gi|314943966|ref|ZP_07850667.1| response regulator receiver domain protein [Enterococcus faecium
TX0133C]
gi|314953851|ref|ZP_07856714.1| response regulator receiver domain protein [Enterococcus faecium
TX0133A]
gi|314993556|ref|ZP_07858912.1| response regulator receiver domain protein [Enterococcus faecium
TX0133B]
gi|314997069|ref|ZP_07862059.1| response regulator receiver domain protein [Enterococcus faecium
TX0133a01]
gi|425036038|ref|ZP_18440840.1| putative heme response regulator HssR [Enterococcus faecium 514]
gi|425042309|ref|ZP_18446654.1| putative heme response regulator HssR [Enterococcus faecium 511]
gi|425048594|ref|ZP_18452489.1| putative heme response regulator HssR [Enterococcus faecium 509]
gi|313588840|gb|EFR67685.1| response regulator receiver domain protein [Enterococcus faecium
TX0133a01]
gi|313591993|gb|EFR70838.1| response regulator receiver domain protein [Enterococcus faecium
TX0133B]
gi|313594186|gb|EFR73031.1| response regulator receiver domain protein [Enterococcus faecium
TX0133A]
gi|313597390|gb|EFR76235.1| response regulator receiver domain protein [Enterococcus faecium
TX0133C]
gi|313641077|gb|EFS05657.1| response regulator receiver domain protein [Enterococcus faecium
TX0133a04]
gi|403016199|gb|EJY29029.1| putative heme response regulator HssR [Enterococcus faecium 514]
gi|403023750|gb|EJY35972.1| putative heme response regulator HssR [Enterococcus faecium 511]
gi|403030207|gb|EJY41912.1| putative heme response regulator HssR [Enterococcus faecium 509]
Length = 239
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L +L+I+DV MP+MDG
Sbjct: 20 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATHIELIITDVMMPEMDG 77
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L+ L D+PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLVGSLRNARFDMPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|424765889|ref|ZP_18193256.1| putative heme response regulator HssR [Enterococcus faecium
TX1337RF]
gi|402413311|gb|EJV45656.1| putative heme response regulator HssR [Enterococcus faecium
TX1337RF]
Length = 239
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 20 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 77
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|386391310|ref|ZP_10076091.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385732188|gb|EIG52386.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 147
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LR+L VDD+ +L LRR + V AL++LREN FD + D+ M DMD
Sbjct: 6 LRLLLVDDEAGFTEVLAKRLRRRGHAVRVALSGAEALRVLREND--FDAAVCDLKMMDMD 63
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G ++L++ + LPVIML+G+G + G++ GA DYLLKP I+EL
Sbjct: 64 GIEVLKIFKKMVPGLPVIMLTGHGSEEAAKDGLSAGASDYLLKPCDIDEL 113
>gi|395803982|ref|ZP_10483223.1| two component transcriptional regulator [Flavobacterium sp. F52]
gi|395433626|gb|EJF99578.1| two component transcriptional regulator [Flavobacterium sp. F52]
Length = 228
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++L +DD T L + L + Y V S +ALK+ E + FD+ I D+ MP MD
Sbjct: 4 FKILYAEDDETLAFLTKDNLEQNHYEVIHCSDGKSALKIFEEEE--FDICIFDIMMPKMD 61
Query: 75 GFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
GF+L E V +++D+P+I LS + +KG+ GA DYL+KP IEEL
Sbjct: 62 GFELAEAVRKIDLDVPIIFLSAKTLKEDRIKGLRLGADDYLVKPFSIEEL 111
>gi|54307731|ref|YP_128751.1| sensory box sensor histidine kinase/response regulator
[Photobacterium profundum SS9]
gi|46912154|emb|CAG18949.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum SS9]
Length = 1131
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 2 TVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKF 61
T E N + P G +L VDD+P L +L LR Y V T ALK++ + +
Sbjct: 710 TCETENLPENPDGELLLVVDDEPVNLQVLNNFLRLEGYRVLTADSGPQALKIIEQQQPA- 768
Query: 62 DLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
L++ D+ MP+M G+++ ++ E ++LP+IMLS G + +KG GA DYL KP
Sbjct: 769 -LILLDIMMPEMSGYEVCHILREEYSLIELPIIMLSALGQVQDRIKGFESGANDYLTKPF 827
Query: 119 RIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 151
EEL ++ K + + Q N+ Q + H
Sbjct: 828 NKEELIARISAHLQAGKTEVQRQKNAALQQEIH 860
>gi|125547838|gb|EAY93660.1| hypothetical protein OsI_15446 [Oryza sativa Indica Group]
Length = 380
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 11 FPSG-LRVLAVDDDP-----TCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
P+G L + +D+D TC ++ T L C VT + I AL L+ LV
Sbjct: 7 IPNGTLSAMVIDEDKCHADSTCSMIC-TQLNFC---VTVFTSPIKALDFLQNQAEGVHLV 62
Query: 65 ISDVHMPDMDGFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
++DV M +M+GF+ L++ L + VIM+S + + + GA + KP+ + +
Sbjct: 63 LADVQMEEMNGFEFLKVARELHKSIQVIMMSTETTIYTMKRCVQLGAQILVKKPLDVVTI 122
Query: 124 KNIWQH----VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNED 179
+N+WQH V++ +KI Q D S A M + +N K KRK
Sbjct: 123 QNLWQHLDIKVLKMEKIKDMLQGVGDK-------STCANEMNSFPENQKDGTKRK----- 170
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
++W+ L +KF+ A+ LG + L +M+V+ +
Sbjct: 171 --------------------YYLMWTPHLQKKFLHALEILGEGQIS----LMIMDVDNID 206
Query: 240 RENVASHLQKYRLYLKR 256
R+ +++HLQK+RL LK+
Sbjct: 207 RKQISTHLQKHRLQLKK 223
>gi|32489917|emb|CAE05509.1| OSJNBa0038P21.2 [Oryza sativa Japonica Group]
gi|125589971|gb|EAZ30321.1| hypothetical protein OsJ_14368 [Oryza sativa Japonica Group]
Length = 380
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 11 FPSG-LRVLAVDDDP-----TCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLV 64
P+G L + +D+D TC ++ T L C VT + I AL L+ LV
Sbjct: 7 IPNGTLSAMVIDEDKCHADSTCSMIC-TQLNFC---VTVFTSPIKALDFLQNQAEGVHLV 62
Query: 65 ISDVHMPDMDGFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
++DV M +M+GF+ L++ L + VIM+S + + + GA + KP+ + +
Sbjct: 63 LADVQMEEMNGFEFLKVARELHKSIQVIMMSTETTIYTMKRCVQLGAQILVKKPLDVVTI 122
Query: 124 KNIWQH----VVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNED 179
+N+WQH V++ +KI Q D S A M + +N K KRK
Sbjct: 123 QNLWQHLDIKVLKMEKIKDMLQGVGDK-------STCANEMNSFPENQKDGTKRK----- 170
Query: 180 EDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLT 239
++W+ L +KF+ A+ LG + L +M+V+ +
Sbjct: 171 --------------------YYLMWTPHLQKKFLHALEILGEGQIS----LMIMDVDNID 206
Query: 240 RENVASHLQKYRLYLKR 256
R+ +++HLQK+RL LK+
Sbjct: 207 RKQISTHLQKHRLQLKK 223
>gi|414871160|tpg|DAA49717.1| TPA: putative homeodomain-like superfamily protein [Zea mays]
Length = 145
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Query: 206 VELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
++LHR+F+AAVN LG +KAVPKKIL+ M V+ LTRE VASHLQKYRL+++++
Sbjct: 1 MQLHRQFIAAVNSLG-EKAVPKKILETMKVKHLTREQVASHLQKYRLHMRKV 51
>gi|317968094|ref|ZP_07969484.1| two-component response regulator [Synechococcus sp. CB0205]
Length = 249
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P+ +L VDD+P+ +LET L Y V T AL+ R N N DLV+ DV MP
Sbjct: 7 PAKETILVVDDEPSIRRILETRLSMIGYQVVTACDGQEALEAFR-NTNP-DLVVLDVMMP 64
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
+DG+ + + + E D+P++ML+ GD + G+ GA DY++KP +EL+ + V+
Sbjct: 65 KLDGYGVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVL 124
Query: 132 RR 133
RR
Sbjct: 125 RR 126
>gi|431778610|ref|ZP_19566820.1| hypothetical protein OM9_00420 [Enterococcus faecium E4389]
gi|430643683|gb|ELB79402.1| hypothetical protein OM9_00420 [Enterococcus faecium E4389]
Length = 232
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL +DDD L++ + + + + L+L+ ENKN F LVI DV MPD+DGF
Sbjct: 4 VLIIDDDKELCTLMKKCIEQEEMSALVANGGTEGLRLIDENKNLFSLVILDVMMPDIDGF 63
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
++LE + ++PV+ML+ + G+ GA DYL KP I+EL ++RR
Sbjct: 64 QVLEKIRETSNIPVLMLTAKSGEDDKVFGLRLGADDYLTKPFSIKELMARVNSLIRR 120
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 4 EHVN----GDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKN 59
EHV+ +P G VL VDDDP L +L +LL Y++ T S + AL+ +R +
Sbjct: 682 EHVSDPSGSRTYPKGPTVLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHIRSGQG 741
Query: 60 KFDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLK 116
DLVI+D MP M G +L V + +LP++ML+ P+ V G+ GA D+L K
Sbjct: 742 -IDLVITDWMMPGMSGLQLCRTVREQHTLFELPILMLTARSLPEDVRTGLQAGANDFLRK 800
Query: 117 PVRIEELKNIWQHVVR-----RKKIDAKDQNNSDNQDKPH 151
PV +EL+ ++++ R+ I A + Q KPH
Sbjct: 801 PVDADELRARVRNLLELRRSVRQTISA-EMAFLQAQIKPH 839
>gi|306832962|ref|ZP_07466094.1| response regulator [Streptococcus bovis ATCC 700338]
gi|304424861|gb|EFM27995.1| response regulator [Streptococcus bovis ATCC 700338]
Length = 232
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL +DDD L++ + + + + L+L+ ENKN F LVI DV MPD+DGF
Sbjct: 4 VLIIDDDKELCALMKKCIEQEEMSALVANGGTEGLRLIDENKNLFSLVILDVMMPDIDGF 63
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
++LE + ++PV+ML+ + G+ GA DYL KP I+EL ++RR
Sbjct: 64 QVLEKIRETSNIPVLMLTAKSGEDDKVFGLRLGADDYLTKPFSIKELMARVNSLIRR 120
>gi|150007937|ref|YP_001302680.1| two-component hybrid sensor kinase/response regulator
[Parabacteroides distasonis ATCC 8503]
gi|255013375|ref|ZP_05285501.1| two-component hybrid sensor kinase/response regulator [Bacteroides
sp. 2_1_7]
gi|262381501|ref|ZP_06074639.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|410103774|ref|ZP_11298695.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
gi|423331562|ref|ZP_17309346.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|149936361|gb|ABR43058.1| two-component system sensor histidine kinase, with a response
regulator receiver domain [Parabacteroides distasonis
ATCC 8503]
gi|262296678|gb|EEY84608.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|409230132|gb|EKN23000.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|409236503|gb|EKN29310.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
Length = 374
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+ S +VL VDD PT ++L++ +L++ Y + T AL++ N+ +L++ D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRI--ANEKHPNLILLDI 59
Query: 69 HMPDMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
MP+MDG+++L+ + D+PVI++S D + ++KG GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREELVK 119
Query: 126 IWQH---VVRRKKIDAKDQNNSDNQDKPHN 152
H + K+I A+ +N +++D ++
Sbjct: 120 RVAHRYELYSIKRIKAELENTIESRDTLYS 149
>gi|298376717|ref|ZP_06986672.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|301310020|ref|ZP_07215959.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|423340452|ref|ZP_17318191.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
gi|298266595|gb|EFI08253.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|300831594|gb|EFK62225.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|409227887|gb|EKN20783.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
Length = 374
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 8/150 (5%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+ S +VL VDD PT ++L++ +L++ Y + T AL++ N+ +L++ D+
Sbjct: 2 DKLASEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALRI--ANEKHPNLILLDI 59
Query: 69 HMPDMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
MP+MDG+++L+ + D+PVI++S D + ++KG GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREELVK 119
Query: 126 IWQH---VVRRKKIDAKDQNNSDNQDKPHN 152
H + K+I A+ +N +++D ++
Sbjct: 120 RVAHRYELYSIKRIKAELENTIESRDTLYS 149
>gi|452851397|ref|YP_007493081.1| Response regulator receiver protein (fragment) [Desulfovibrio
piezophilus]
gi|451895051|emb|CCH47930.1| Response regulator receiver protein (fragment) [Desulfovibrio
piezophilus]
Length = 123
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P +RVL VDD+ +L L + VT+ + A++ LR + FD+ I D+ M
Sbjct: 3 PPSIRVLIVDDEIGFTEVLHKRLAKRGLTVTSATSGSQAIRTLR--LHDFDVAILDLKME 60
Query: 72 DMDGFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
DMDG ++L++ + ++PVIML+G+G K +G+ GA DYLLKP +E + I
Sbjct: 61 DMDGIEVLQIFKKMVPEMPVIMLTGHGSEKAAKEGLKAGAYDYLLKPCAMEAVLEIIHQA 120
Query: 131 VRR 133
V++
Sbjct: 121 VKK 123
>gi|114569317|ref|YP_755997.1| two component transcriptional regulator [Maricaulis maris MCS10]
gi|114339779|gb|ABI65059.1| two component transcriptional regulator, winged helix family
[Maricaulis maris MCS10]
Length = 233
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDD LL+ L+ + V+T A AL L N FDL++ DV MP M+GF
Sbjct: 11 ILVVDDDDRIRNLLKRFLQERGFRVSTAPNAGKALSTL--NSLAFDLLVLDVMMPGMNGF 68
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
+L E V + P+++L+ GD + +KG++ GA DYL KP EEL ++RR +
Sbjct: 69 ELTEAVRKRGETPILLLTARGDAEDRIKGLSLGADDYLPKPFEPEELVLRINAILRRAR 127
>gi|392408183|ref|YP_006444791.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Anaerobaculum mobile DSM 13181]
gi|390621319|gb|AFM22466.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Anaerobaculum mobile DSM 13181]
Length = 228
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL DDD + L L +L +Y V T S I A+ L + FDLVI DV MP +D
Sbjct: 2 MRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDAV--FDLVILDVMMPHID 59
Query: 75 GFKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G LLE + +++PV+ML+ GD + +KG+ GA DYL KP I+EL + ++RR
Sbjct: 60 GLSLLEQMRKGGINIPVLMLTAKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALLRR 119
>gi|310642219|ref|YP_003946977.1| chemotaxis protein CheY [Paenibacillus polymyxa SC2]
gi|386041177|ref|YP_005960131.1| transcriptional regulatory protein yycF [Paenibacillus polymyxa M1]
gi|309247169|gb|ADO56736.1| Response regulators consisting of a CheY-like receiver domain
protein and a winged-helix DNA-binding domain protein
[Paenibacillus polymyxa SC2]
gi|343097215|emb|CCC85424.1| transcriptional regulatory protein yycF [Paenibacillus polymyxa M1]
Length = 219
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+LAVDD+P L LL+ +L++ + VT S T+ ++L FDL++ DV MP+MDGF
Sbjct: 4 LLAVDDEPAVLALLQNILQKDGHVVTVVS---TSPQVLTMQLGAFDLILLDVMMPNMDGF 60
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
L + ++D P++ L+ VM G+ GA DY++KP EL+
Sbjct: 61 TLCREIRSKVDCPILFLTAKSMENDVMLGLGEGADDYIVKPFGAGELR 108
>gi|295913655|gb|ADG58070.1| transcription factor [Lycoris longituba]
Length = 151
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 55/75 (73%)
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
+DE+ + ++ R+VW+ +LH++F+ + +LG +AVPKKI+++MNVE LTRE+V
Sbjct: 74 NDEEVLEGSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEAVPKKIMEMMNVEGLTREHV 133
Query: 244 ASHLQKYRLYLKRIS 258
ASHLQKY++ K IS
Sbjct: 134 ASHLQKYQMKFKEIS 148
>gi|226324201|ref|ZP_03799719.1| hypothetical protein COPCOM_01980 [Coprococcus comes ATCC 27758]
gi|225207750|gb|EEG90104.1| response regulator receiver domain protein [Coprococcus comes ATCC
27758]
Length = 220
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|94266006|ref|ZP_01289728.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93453435|gb|EAT03854.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 458
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLREN-KNKFDLVISDVHMPDMD 74
R+L VDD+P L L+ R Y V T + AL LR N K DL+++D+ MP MD
Sbjct: 21 RLLVVDDEPFVLQLVSLQARGLGYQVETANSGPKALLRLRNNNKPPIDLLLTDILMPKMD 80
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
G LLE L+ +L VI++SG + K + + GA DYL KP I+EL+
Sbjct: 81 GLSLLEQARHLQPELEVIVISGQDEIKTAVAAMRRGARDYLQKPFSIQELE 131
>gi|328952038|ref|YP_004369372.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
gi|328452362|gb|AEB08191.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
Length = 135
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 16 RVLAVDDDPTCLLLLETLLR-RCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
R+L VDD+P L LL+ ++ + Y V TT+ + KLL+E FDL+I+D+ MP +D
Sbjct: 4 RILVVDDEPNMLRLLKAIITGKTSYEVVTTNNPLEVSKLLQEEL--FDLLITDLKMPLLD 61
Query: 75 GFKLLELVGLEMD--LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G L++ V +MD LP+IM++ G + + I GA DY+ KP R E +
Sbjct: 62 GMDLIDTVK-KMDPTLPIIMITAYGTIETAEEAIQKGAYDYITKPFRQEAI 111
>gi|225377534|ref|ZP_03754755.1| hypothetical protein ROSEINA2194_03184 [Roseburia inulinivorans DSM
16841]
gi|225210611|gb|EEG92965.1| hypothetical protein ROSEINA2194_03184 [Roseburia inulinivorans DSM
16841]
Length = 220
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LKL E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKLNMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|392409544|ref|YP_006446151.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
gi|390622680|gb|AFM23887.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
Length = 139
Score = 75.5 bits (184), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
+ RVL VDD+ L L L++ + VT+ AL++++ + D+V+ DV MPD
Sbjct: 2 TDFRVLLVDDETEFLETLVKRLKKRKLDVTSADSGRKALEIIQSDP--IDVVVLDVRMPD 59
Query: 73 MDGFKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
MDG + L E+ L+ + VIML+G+ ++ ++G+ GA DYL+KP+ I+EL Q
Sbjct: 60 MDGLETLKEIKRLKPSIEVIMLTGHASVEVAIQGMELGAFDYLMKPMDIDELLFKLQDAY 119
Query: 132 RRK 134
+RK
Sbjct: 120 KRK 122
>gi|302753288|ref|XP_002960068.1| hypothetical protein SELMODRAFT_402040 [Selaginella moellendorffii]
gi|300171007|gb|EFJ37607.1| hypothetical protein SELMODRAFT_402040 [Selaginella moellendorffii]
Length = 396
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
Q+K R WS ELHR+FV A+ QLG + A PK+I +LM V+ LT + V SHLQKYRL+ +
Sbjct: 226 QRKARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR 285
Query: 256 RISCV----ANQQANMVAALGS 273
R + V A Q++ V LGS
Sbjct: 286 RPATVAPGTAAQKSPQVVVLGS 307
>gi|119486641|ref|ZP_01620691.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
gi|119456258|gb|EAW37390.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
Length = 243
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T + AL+ R K + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|224090570|ref|XP_002335000.1| predicted protein [Populus trichocarpa]
gi|222832552|gb|EEE71029.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 252
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM ++ LTR N+ASHLQ + L
Sbjct: 136 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQVHIL 191
>gi|357634808|ref|ZP_09132686.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|357583362|gb|EHJ48695.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
Length = 147
Score = 75.5 bits (184), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LR+L VDD+ +L LRR + V AL++LREN FD + D+ M DMD
Sbjct: 6 LRLLLVDDEAGFTEVLAKRLRRRGHAVRVALSGAEALRVLREND--FDAAVCDLKMMDMD 63
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
G ++L++ + LPV+ML+G+G + G++ GA DYLLKP I+EL
Sbjct: 64 GIEVLKIFKKMVPGLPVVMLTGHGSEEAAKDGLSAGASDYLLKPCDIDEL 113
>gi|302804638|ref|XP_002984071.1| hypothetical protein SELMODRAFT_423260 [Selaginella moellendorffii]
gi|300148423|gb|EFJ15083.1| hypothetical protein SELMODRAFT_423260 [Selaginella moellendorffii]
Length = 396
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLK 255
Q+K R WS ELHR+FV A+ QLG + A PK+I +LM V+ LT + V SHLQKYRL+ +
Sbjct: 226 QRKARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR 285
Query: 256 RISCV----ANQQANMVAALGS 273
R + V A Q++ V LGS
Sbjct: 286 RPATVAPGTAAQKSPQVVVLGS 307
>gi|325910794|dbj|BAJ83827.1| circadian response regulator 1b [Physcomitrella patens subsp.
patens]
Length = 701
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 53 LLRENKNKFDLVISDVHMPDMDGFKLL-ELVGLEM--DLPVIMLSGNGDPKLVMKGITHG 109
+L + + FDLV++DV MP + G LL +++ E +P++++S +V + I+ G
Sbjct: 1 MLEDANSNFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVIMSSYDSLDIVFRCISKG 60
Query: 110 ACDYLLKPVRIEELKNIWQHVVRR 133
ACDYL+KPVR EL+N+WQHV R+
Sbjct: 61 ACDYLVKPVRKNELRNLWQHVWRK 84
>gi|430837333|ref|ZP_19455304.1| DNA-binding response regulator [Enterococcus faecium E0680]
gi|431377779|ref|ZP_19510565.1| DNA-binding response regulator [Enterococcus faecium E1627]
gi|431504179|ref|ZP_19515399.1| DNA-binding response regulator [Enterococcus faecium E1634]
gi|430487444|gb|ELA64181.1| DNA-binding response regulator [Enterococcus faecium E0680]
gi|430582729|gb|ELB21145.1| DNA-binding response regulator [Enterococcus faecium E1627]
gi|430587443|gb|ELB25669.1| DNA-binding response regulator [Enterococcus faecium E1634]
Length = 222
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|343492741|ref|ZP_08731095.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
gi|342826861|gb|EGU61268.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
Length = 252
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L V+DDP L LL QY VT+ AL+ L+ + FDL+I DV +PD+DG
Sbjct: 24 KLLLVEDDPDLNSQLSALLSSQQYEVTSYESGSKALECLK--THSFDLIILDVDLPDVDG 81
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
F+LL V PV+ML+ G + ++G+ GA DY+ KP EL + ++RR +
Sbjct: 82 FELLNYVREHSSTPVVMLTAYGAEEHRIRGLRFGADDYVSKPCSFTELCLRIEGILRRTQ 141
>gi|329924374|ref|ZP_08279491.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328940725|gb|EGG37042.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1021
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDDP L +LE +L +Y VT + AL +L + +DLVISD+ MP M G+
Sbjct: 698 LLIVDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL--DAKAWDLVISDIMMPQMSGY 755
Query: 77 KLLELVGLEM---DLPVIMLSGNGDPKLVMKGITHGACDYLLKPV-------RIEELKNI 126
+L + +LPV++L+ PK + G GA DY+ KPV RIE L I
Sbjct: 756 ELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEIRSRIEALTTI 815
Query: 127 WQHVVRRKKIDAKDQNNSDNQDKPH 151
+ V + +++A Q +PH
Sbjct: 816 KRTVREQLRLEAAWLQ---AQIQPH 837
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS R+L VDDDP L ++ LL Y + ++A AL+LL + ++DL+ISDV MP
Sbjct: 716 PSDGRLLIVDDDPVNLKVIHHLLADEGYRIVAVTRAEEALQLL--EQGEWDLIISDVMMP 773
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKN 125
M G++L + + +LP+++L+ P+ + G GA DYL+KPV ELK
Sbjct: 774 QMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPVDHLELKT 830
>gi|323702183|ref|ZP_08113850.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333924413|ref|YP_004497993.1| winged helix family two component transcriptional regulator
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532870|gb|EGB22742.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333749974|gb|AEF95081.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 224
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
G R+L +DDDP +L+ +L Y V + T LK+ KN +L+I D+ MP +
Sbjct: 2 GARILVIDDDPKITAMLQRVLTYEGYRVEVANDGYTGLKM--AQKNPPELLILDIMMPGL 59
Query: 74 DGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
DG+++ E +P+++LS + + +KG+ GA DYL+KP +EEL Q ++RR
Sbjct: 60 DGWEICRRFRRENFIPILILSARDEVESRVKGLNLGADDYLVKPFALEELLARVQALLRR 119
Query: 134 KKIDAKDQNNSD 145
K AK +D
Sbjct: 120 KTNSAKVIQFAD 131
>gi|406889094|gb|EKD35381.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator), partial [uncultured bacterium]
Length = 140
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VDDDP+ L +LE L+ Y V S AL+LL+ K+ D+++SD+ MP+M G
Sbjct: 7 VLIVDDDPSILEVLEARLQAAGYLVRRASSGPAALELLK--KHPIDILVSDMKMPEMSGI 64
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+LL E G++ LPVI L+ G + + GA DYL KP +EL
Sbjct: 65 ELLAETYGIQPHLPVIFLTAYGTIPDAVDAVKAGAVDYLTKPFDGKEL 112
>gi|320580712|gb|EFW94934.1| heat shock transcription factor, putative [Ogataea parapolymorpha
DL-1]
Length = 474
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 3 VEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
V NG SG+ VL V+DD C+ L L + V + + A+ +L K KFD
Sbjct: 290 VRRTNG----SGMHVLLVEDDEVCIQLCSKFLMKYGCTVEVVTDGLAAINVLE--KVKFD 343
Query: 63 LVISDVHMPDMDGFKLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
LV+ D+ MP++DG ++ ++D P+I ++GN + ++ + HG D L KP
Sbjct: 344 LVLMDIVMPNLDGASATSVIRSFDVDTPIIAMTGNYQHQDLVTYLNHGMTDILAKPFTKN 403
Query: 122 ELKNIWQ--HVVRRKKIDAKDQNNSDNQDKP-HNGSGQ 156
+L NI + H+ ++ D N N++ P H+ +GQ
Sbjct: 404 DLYNILEKHHIDKKLIYPVNDPFNPLNKNSPSHSVTGQ 441
>gi|69244455|ref|ZP_00602871.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Enterococcus faecium DO]
gi|257879039|ref|ZP_05658692.1| transcriptional regulator [Enterococcus faecium 1,230,933]
gi|257881663|ref|ZP_05661316.1| transcriptional regulator [Enterococcus faecium 1,231,502]
gi|257890891|ref|ZP_05670544.1| transcriptional regulator [Enterococcus faecium 1,231,410]
gi|260558562|ref|ZP_05830758.1| response regulator receiver:Transcriptional regulatory protein
[Enterococcus faecium C68]
gi|293562842|ref|ZP_06677314.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1162]
gi|293568418|ref|ZP_06679738.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1071]
gi|294623349|ref|ZP_06702209.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium U0317]
gi|383327745|ref|YP_005353629.1| DNA-binding response regulator [Enterococcus faecium Aus0004]
gi|406581433|ref|ZP_11056586.1| DNA-binding response regulator [Enterococcus sp. GMD4E]
gi|406583727|ref|ZP_11058779.1| DNA-binding response regulator [Enterococcus sp. GMD3E]
gi|406586061|ref|ZP_11061009.1| DNA-binding response regulator [Enterococcus sp. GMD2E]
gi|406591647|ref|ZP_11065905.1| DNA-binding response regulator [Enterococcus sp. GMD1E]
gi|410935965|ref|ZP_11367838.1| response regulator [Enterococcus sp. GMD5E]
gi|415897930|ref|ZP_11551186.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E4453]
gi|416129849|ref|ZP_11597401.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E4452]
gi|427397250|ref|ZP_18889876.1| hypothetical protein HMPREF9307_02052 [Enterococcus durans
FB129-CNAB-4]
gi|430832142|ref|ZP_19450190.1| DNA-binding response regulator [Enterococcus faecium E0333]
gi|430843368|ref|ZP_19461268.1| DNA-binding response regulator [Enterococcus faecium E1050]
gi|430855431|ref|ZP_19473139.1| DNA-binding response regulator [Enterococcus faecium E1392]
gi|430861675|ref|ZP_19479139.1| DNA-binding response regulator [Enterococcus faecium E1573]
gi|430955841|ref|ZP_19486641.1| DNA-binding response regulator [Enterococcus faecium E1576]
gi|431000956|ref|ZP_19488437.1| DNA-binding response regulator [Enterococcus faecium E1578]
gi|431231668|ref|ZP_19502711.1| DNA-binding response regulator [Enterococcus faecium E1622]
gi|431257765|ref|ZP_19505048.1| DNA-binding response regulator [Enterococcus faecium E1623]
gi|431303227|ref|ZP_19508074.1| DNA-binding response regulator [Enterococcus faecium E1626]
gi|431542731|ref|ZP_19518393.1| DNA-binding response regulator [Enterococcus faecium E1731]
gi|431748219|ref|ZP_19536981.1| DNA-binding response regulator [Enterococcus faecium E2297]
gi|431753719|ref|ZP_19542386.1| DNA-binding response regulator [Enterococcus faecium E2883]
gi|431768940|ref|ZP_19557372.1| DNA-binding response regulator [Enterococcus faecium E1321]
gi|431769719|ref|ZP_19558124.1| DNA-binding response regulator [Enterococcus faecium E1644]
gi|431773577|ref|ZP_19561899.1| DNA-binding response regulator [Enterococcus faecium E2369]
gi|431776689|ref|ZP_19564949.1| DNA-binding response regulator [Enterococcus faecium E2560]
gi|431780595|ref|ZP_19568769.1| DNA-binding response regulator [Enterococcus faecium E4389]
gi|431782805|ref|ZP_19570934.1| DNA-binding response regulator [Enterococcus faecium E6012]
gi|431784628|ref|ZP_19572665.1| DNA-binding response regulator [Enterococcus faecium E6045]
gi|447911889|ref|YP_007393301.1| Two-component response regulator colocalized with HrtAB transporter
[Enterococcus faecium NRRL B-2354]
gi|68196396|gb|EAN10824.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Enterococcus faecium DO]
gi|257813267|gb|EEV42025.1| transcriptional regulator [Enterococcus faecium 1,230,933]
gi|257817321|gb|EEV44649.1| transcriptional regulator [Enterococcus faecium 1,231,502]
gi|257827251|gb|EEV53877.1| transcriptional regulator [Enterococcus faecium 1,231,410]
gi|260075736|gb|EEW64042.1| response regulator receiver:Transcriptional regulatory protein
[Enterococcus faecium C68]
gi|291588754|gb|EFF20582.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1071]
gi|291597243|gb|EFF28434.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium U0317]
gi|291605166|gb|EFF34628.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E1162]
gi|364090296|gb|EHM32900.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E4453]
gi|364094172|gb|EHM36370.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E4452]
gi|378937439|gb|AFC62511.1| DNA-binding response regulator [Enterococcus faecium Aus0004]
gi|404452637|gb|EJZ99799.1| DNA-binding response regulator [Enterococcus sp. GMD4E]
gi|404456215|gb|EKA02951.1| DNA-binding response regulator [Enterococcus sp. GMD3E]
gi|404461739|gb|EKA07605.1| DNA-binding response regulator [Enterococcus sp. GMD2E]
gi|404467378|gb|EKA12506.1| DNA-binding response regulator [Enterococcus sp. GMD1E]
gi|410735674|gb|EKQ77582.1| response regulator [Enterococcus sp. GMD5E]
gi|425722576|gb|EKU85471.1| hypothetical protein HMPREF9307_02052 [Enterococcus durans
FB129-CNAB-4]
gi|430480783|gb|ELA57957.1| DNA-binding response regulator [Enterococcus faecium E0333]
gi|430497819|gb|ELA73847.1| DNA-binding response regulator [Enterococcus faecium E1050]
gi|430546486|gb|ELA86429.1| DNA-binding response regulator [Enterococcus faecium E1392]
gi|430549714|gb|ELA89529.1| DNA-binding response regulator [Enterococcus faecium E1573]
gi|430557024|gb|ELA96506.1| DNA-binding response regulator [Enterococcus faecium E1576]
gi|430562615|gb|ELB01847.1| DNA-binding response regulator [Enterococcus faecium E1578]
gi|430573407|gb|ELB12222.1| DNA-binding response regulator [Enterococcus faecium E1622]
gi|430577500|gb|ELB16097.1| DNA-binding response regulator [Enterococcus faecium E1623]
gi|430579868|gb|ELB18348.1| DNA-binding response regulator [Enterococcus faecium E1626]
gi|430592654|gb|ELB30659.1| DNA-binding response regulator [Enterococcus faecium E1731]
gi|430614272|gb|ELB51260.1| DNA-binding response regulator [Enterococcus faecium E2297]
gi|430621052|gb|ELB57840.1| DNA-binding response regulator [Enterococcus faecium E2883]
gi|430628367|gb|ELB64809.1| DNA-binding response regulator [Enterococcus faecium E1321]
gi|430636161|gb|ELB72235.1| DNA-binding response regulator [Enterococcus faecium E2369]
gi|430636348|gb|ELB72414.1| DNA-binding response regulator [Enterococcus faecium E1644]
gi|430639334|gb|ELB75208.1| DNA-binding response regulator [Enterococcus faecium E4389]
gi|430640526|gb|ELB76361.1| DNA-binding response regulator [Enterococcus faecium E2560]
gi|430646659|gb|ELB82128.1| DNA-binding response regulator [Enterococcus faecium E6012]
gi|430649032|gb|ELB84420.1| DNA-binding response regulator [Enterococcus faecium E6045]
gi|445187598|gb|AGE29240.1| Two-component response regulator colocalized with HrtAB transporter
[Enterococcus faecium NRRL B-2354]
Length = 222
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|381151411|ref|ZP_09863280.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
gi|380883383|gb|EIC29260.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
Length = 450
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L +DDDP + L +LR+ Y VT +Q AL+ + K FDLV+SDV MP M G
Sbjct: 7 RLLVIDDDPGVVDYLLEMLRQQGYSVTGCTQTGQALEAI--EKEPFDLVVSDVVMPGMRG 64
Query: 76 FKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
+L+ + + + V++++ G L ++ + GACD+L KP RIEEL
Sbjct: 65 LELMAAIHRKRPEQLVLLITAFGSIDLAIQSMRAGACDFLTKPFRIEEL 113
>gi|424853639|ref|ZP_18277998.1| putative heme response regulator HssR [Enterococcus faecium R499]
gi|402932473|gb|EJX51981.1| putative heme response regulator HssR [Enterococcus faecium R499]
Length = 239
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L +L+I+DV MP+MDG
Sbjct: 20 RILVVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATHIELIITDVMMPEMDG 77
Query: 76 FKLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ L+ L D+PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLVGSLRNARFDMPVLMITAKADFEDKKRGFKLGADDYMTKPLDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|158319257|ref|YP_001511764.1| two component, sigma54 specific, Fis family transcriptional
regulator [Alkaliphilus oremlandii OhILAs]
gi|158139456|gb|ABW17768.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Alkaliphilus oremlandii OhILAs]
Length = 440
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL VDD+ + LL+ L R Y V ++ ++ AL ++ E + FD+ + D+ M MDG
Sbjct: 5 RVLLVDDEEKFIELLKQRLTRKGYSVEISNCSLKALNMIEETE--FDVALFDIMMNGMDG 62
Query: 76 FKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
LLE ++ +L +IML+G ++ + GA DYL KP++ EL+ I Q + RK
Sbjct: 63 LALLEKAKKIQPNLEIIMLTGYATVDTAIEAMKKGAYDYLTKPIKPIELELILQKALDRK 122
Query: 135 KIDAKDQNNSDNQ-DKPHNGSGQAEGMGNSD 164
K+ Q+ S+N + + + E +GNSD
Sbjct: 123 KL----QDYSNNLIETIQRTNKKREIIGNSD 149
>gi|94266547|ref|ZP_01290233.1| GGDEF:Response regulator receiver [delta proteobacterium MLMS-1]
gi|93452822|gb|EAT03348.1| GGDEF:Response regulator receiver [delta proteobacterium MLMS-1]
Length = 305
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+++LAVDDDP L LL+T + +H T + + AL+ L E N F +V+SD+ MP MD
Sbjct: 15 VKILAVDDDPQVLNLLQTAITSFGHHCVTATDGVEALEKLEE--NGFAIVLSDMTMPRMD 72
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G LL+ L L +IM++G + + I GA D++ KP I EL+ + V+R
Sbjct: 73 GMALLKKAKDLHPRLDIIMITGYAETYSYTEVIRAGASDFITKPFGINELEAKLRRVLRE 132
Query: 134 KKI 136
+++
Sbjct: 133 QEL 135
>gi|94272493|ref|ZP_01292134.1| GGDEF:Response regulator receiver [delta proteobacterium MLMS-1]
gi|93450109|gb|EAT01451.1| GGDEF:Response regulator receiver [delta proteobacterium MLMS-1]
Length = 305
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+++LAVDDDP L LL+T + +H T + + AL+ L E N F +V+SD+ MP MD
Sbjct: 15 VKILAVDDDPQVLNLLQTAITSFGHHCVTATDGVEALEKLEE--NGFAIVLSDMTMPRMD 72
Query: 75 GFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G LL+ L L +IM++G + + I GA D++ KP I EL+ + V+R
Sbjct: 73 GMALLKKAKDLHPRLDIIMITGYAETYSYTEVIRAGASDFITKPFGINELEAKLRRVLRE 132
Query: 134 KKI 136
+++
Sbjct: 133 QEL 135
>gi|220906550|ref|YP_002481861.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7425]
gi|219863161|gb|ACL43500.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7425]
Length = 243
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y+V T + AL+ RE DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYNVVTAADGEEALETFREEVP--DLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|153856099|ref|ZP_01996963.1| hypothetical protein DORLON_02993, partial [Dorea longicatena DSM
13814]
gi|149751716|gb|EDM61647.1| response regulator receiver domain protein, partial [Dorea
longicatena DSM 13814]
Length = 111
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
F+L + + + +D P++ L+ + ++ G++ GA DY+ KP + EL+
Sbjct: 60 FELCKRIRILVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELR 108
>gi|392987941|ref|YP_006486534.1| two component transcriptional regulator, winged helix family
protein [Enterococcus hirae ATCC 9790]
gi|392335361|gb|AFM69643.1| two component transcriptional regulator, winged helix family
protein [Enterococcus hirae ATCC 9790]
Length = 241
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DD LL ++L + V T S AL L EN + +L+I+D+ MP+MDG
Sbjct: 20 RILVVEDDENLQLLYRSVLEHAGFSVVTASSGTEALARL-ENFH-VELIITDIMMPEMDG 77
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
++LLE L +++LPV+M++ D + +G G DY+ KPV + E+ + +++R
Sbjct: 78 YELLESLRDGKIELPVLMITAKADFEDKKRGFQLGTDDYMTKPVDVNEMVLRVEALLKRA 137
Query: 135 KIDAKDQNNSDN 146
KI+ +Q N N
Sbjct: 138 KINHSNQLNIGN 149
>gi|239905955|ref|YP_002952694.1| response regulator receiver protein [Desulfovibrio magneticus RS-1]
gi|239795819|dbj|BAH74808.1| response regulator receiver protein [Desulfovibrio magneticus RS-1]
Length = 151
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHM 70
GLRVLAVDD+ +ETL++R Y VT AL LL + FD+VI D+ M
Sbjct: 23 GLRVLAVDDEAD---FIETLVKRFTYRQIPVTAAGNGPDALALLE--REPFDVVILDMRM 77
Query: 71 PDMDGFKLLELVGLEMDL-PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
P MDG +L+ + L VI+L+G+ + M+G++ GA DY+LKPV EL +
Sbjct: 78 PGMDGLAVLQEIKKRHPLVEVIILTGHASVESGMQGMSLGAYDYVLKPVDFGELLEKAKK 137
Query: 130 VVRRKKID 137
RKK++
Sbjct: 138 AYERKKLN 145
>gi|325289049|ref|YP_004265230.1| two component transcriptional regulator, winged helix family
[Syntrophobotulus glycolicus DSM 8271]
gi|324964450|gb|ADY55229.1| two component transcriptional regulator, winged helix family
[Syntrophobotulus glycolicus DSM 8271]
Length = 227
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITAL-KLLRENKNKFDLVISDVHMPDMD 74
+++ VDDDP L+ LL R + + AL K+L +N DLVI DV MP+MD
Sbjct: 5 KIMIVDDDPNIRELVLALLHRSGFAACEAADGREALQKMLNDNP---DLVIIDVMMPNMD 61
Query: 75 GFKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
GF+L L +LPVIML+ G+ +KG GA DYL KP +EL Q ++RR
Sbjct: 62 GFELCRHLRRYYENLPVIMLTAKGELASKVKGFGLGADDYLTKPFEGDELIARVQALLRR 121
Query: 134 KKIDA 138
KI+A
Sbjct: 122 YKIEA 126
>gi|431757584|ref|ZP_19546213.1| DNA-binding response regulator [Enterococcus faecium E3083]
gi|430618089|gb|ELB54936.1| DNA-binding response regulator [Enterococcus faecium E3083]
Length = 222
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSARFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|414077097|ref|YP_006996415.1| two-component response regulator [Anabaena sp. 90]
gi|413970513|gb|AFW94602.1| two-component response regulator [Anabaena sp. 90]
Length = 242
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T AL++ R K + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|425055043|ref|ZP_18458536.1| putative heme response regulator HssR [Enterococcus faecium 505]
gi|403034764|gb|EJY46192.1| putative heme response regulator HssR [Enterococcus faecium 505]
Length = 239
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 20 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--ETTRIELIITDIMMPKMDG 77
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 78 YDLLDSLRSTRFDTPVLMITAKTDFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 137
Query: 135 KID 137
KI+
Sbjct: 138 KIN 140
>gi|332289343|ref|YP_004420195.1| acetoacetate metabolism regulatory protein AtoC [Gallibacterium
anatis UMN179]
gi|330432239|gb|AEC17298.1| acetoacetate metabolism regulatory protein AtoC [Gallibacterium
anatis UMN179]
Length = 415
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L +DDD L +TLL YH+ TS AL L+ N + F +VISD++MP M G+
Sbjct: 8 ILLIDDDMDVLQAYQTLLELEDYHIIATSDPEEALALI--NLDWFGVVISDIYMPKMSGW 65
Query: 77 KLLELV-GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
LLE V + D+PVI+++G+GD + ++ + GA ++ KPV
Sbjct: 66 SLLEKVRAKDKDVPVILITGHGDVPMAIEAVKKGAFYFIEKPV 108
>gi|257888948|ref|ZP_05668601.1| transcriptional regulator [Enterococcus faecium 1,141,733]
gi|257893831|ref|ZP_05673484.1| transcriptional regulator [Enterococcus faecium 1,231,408]
gi|293378616|ref|ZP_06624776.1| response regulator receiver domain protein [Enterococcus faecium
PC4.1]
gi|430847647|ref|ZP_19465483.1| DNA-binding response regulator [Enterococcus faecium E1133]
gi|431039302|ref|ZP_19492537.1| DNA-binding response regulator [Enterococcus faecium E1590]
gi|431762857|ref|ZP_19551413.1| DNA-binding response regulator [Enterococcus faecium E3548]
gi|257825004|gb|EEV51934.1| transcriptional regulator [Enterococcus faecium 1,141,733]
gi|257830210|gb|EEV56817.1| transcriptional regulator [Enterococcus faecium 1,231,408]
gi|292642747|gb|EFF60897.1| response regulator receiver domain protein [Enterococcus faecium
PC4.1]
gi|430536965|gb|ELA77325.1| DNA-binding response regulator [Enterococcus faecium E1133]
gi|430562247|gb|ELB01493.1| DNA-binding response regulator [Enterococcus faecium E1590]
gi|430623055|gb|ELB59756.1| DNA-binding response regulator [Enterococcus faecium E3548]
Length = 222
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|440682389|ref|YP_007157184.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
gi|428679508|gb|AFZ58274.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
Length = 242
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T AL++ R K + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|330836364|ref|YP_004411005.1| winged helix family two component transcriptional regulator
[Sphaerochaeta coccoides DSM 17374]
gi|329748267|gb|AEC01623.1| two component transcriptional regulator, winged helix family
[Sphaerochaeta coccoides DSM 17374]
Length = 224
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDDDP L+ +L++ + V + + AL L +K DL I D+ MP+MDG
Sbjct: 3 KILVVDDDPHLRELVRIILQKEGFAVYEAADGLEALSKLETSKA--DLAIIDLMMPNMDG 60
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
F+L + + D+PV+ML+ G+ +KG GA DYL+KP EL + +++R +
Sbjct: 61 FELCQELRASYDIPVLMLTAKGETAQKIKGFQAGADDYLVKPFEPLELMARVKALLKRYQ 120
Query: 136 IDA 138
I A
Sbjct: 121 IIA 123
>gi|302342658|ref|YP_003807187.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301639271|gb|ADK84593.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 288
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 1 MTVEHVNGDQFP-SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKN 59
M+ + N ++ P R+L DD+ LL+ L + V ALKL RE
Sbjct: 1 MSCDKPNDEKLPVRPSRILVADDEDALRELLKRFLETKGHQVVLAQDGREALKLFREQP- 59
Query: 60 KFDLVISDVHMPDMDGFKLLELVG-LEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPV 118
FDLV+SDV MP +DG +LL V + PV+++SG GD + V+ + GA ++L KP+
Sbjct: 60 -FDLVLSDVRMPGLDGLQLLAAVKDINPRTPVVLISGYGDIETVVTALKAGAENFLAKPI 118
Query: 119 RIEELKNI 126
RI+ L+ +
Sbjct: 119 RIDMLRRV 126
>gi|254486252|ref|ZP_05099457.1| response regulator receiver domain protein [Roseobacter sp. GAI101]
gi|214043121|gb|EEB83759.1| response regulator receiver domain protein [Roseobacter sp. GAI101]
Length = 314
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQ-YHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
+R+LAVDDD L LLE + ++ V + AL+ + +K+ FD + D+ MP+M
Sbjct: 1 MRILAVDDDSVVLDLLEVIFKQSDGIEVVVAASGALALEAIATSKDGFDCFLLDISMPEM 60
Query: 74 DGFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G +L E + G D P+IML+ N D + + GA DY+ KP + ++ Q
Sbjct: 61 TGIELCERIRVHGAHRDTPIIMLTANTDKTSIEQAFAAGASDYITKPFDVADISTRVQIA 120
Query: 131 VR 132
R
Sbjct: 121 AR 122
>gi|357443035|ref|XP_003591795.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355480843|gb|AES62046.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 307
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 187 DDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVAS 245
++ ++ ++K R WS ELH++F+ A+ QLG D A PK+I ++MNV+ LT + V S
Sbjct: 128 ENRKRDEKEEKRKQRRCWSQELHKRFLKALQQLGGADCATPKQIREVMNVDGLTNDEVKS 187
Query: 246 HLQKYRLYLKRISCVANQQANMVAA 270
HLQKYRL+ +R S N+ AN A
Sbjct: 188 HLQKYRLHTRRPSSTNNESANSQTA 212
>gi|257900011|ref|ZP_05679664.1| transcriptional regulator [Enterococcus faecium Com15]
gi|257837923|gb|EEV62997.1| transcriptional regulator [Enterococcus faecium Com15]
Length = 222
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--EATRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|302842110|ref|XP_002952599.1| hypothetical protein VOLCADRAFT_93268 [Volvox carteri f.
nagariensis]
gi|300262238|gb|EFJ46446.1| hypothetical protein VOLCADRAFT_93268 [Volvox carteri f.
nagariensis]
Length = 1021
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
G VL+VDDDP +++E LL Y V AL L++ D+++ D+ MPDM
Sbjct: 536 GCMVLSVDDDPINQMVVENLLSPEGYKVEQAMSGSEALDFLKKTATLPDVILLDIMMPDM 595
Query: 74 DGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
G+++ + + + +P+IM+S G P+ VMKG+ G+ DY+ KP +EL + +
Sbjct: 596 SGYEVCQEIRRRYSAVSIPIIMVSAKGHPEHVMKGLEAGSVDYVKKPFHRQELLSRIRAQ 655
Query: 131 VRRKKI 136
VR ++I
Sbjct: 656 VRNREI 661
>gi|346308873|ref|ZP_08850978.1| hypothetical protein HMPREF9457_02687 [Dorea formicigenerans
4_6_53AFAA]
gi|345901952|gb|EGX71748.1| hypothetical protein HMPREF9457_02687 [Dorea formicigenerans
4_6_53AFAA]
Length = 233
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 16 RVLAVDDDPTCLLLLETLLRRC--QYHVTTTSQA--ITALKLLRENKNKFDLVISDVHMP 71
+VL +DDD L TL+++C Q ++T I L +L E+KN L+I D+ MP
Sbjct: 3 KVLIIDDDKE----LCTLMKKCVEQENLTAVVAGGGIEGLHILEESKNACSLIILDIMMP 58
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
D+DGF++L+ + ++PV+ML+ D + + G+ GA DYL KP I EL ++
Sbjct: 59 DLDGFQVLQQIRQTSNVPVLMLTAKSDEEDKVSGLRMGADDYLTKPFSINELMARVNSLI 118
Query: 132 RR 133
RR
Sbjct: 119 RR 120
>gi|343505269|ref|ZP_08742847.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
gi|342808228|gb|EGU43390.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
Length = 252
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S L +L V+DD L LL+ Y V+ AL LL+ +FDL++ DV++P+
Sbjct: 22 SPLSILLVEDDINLNHQLTALLQSEHYCVSNVECGAKALTLLK--MRQFDLILLDVNIPN 79
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVR 132
+DGF LL+ V PVIML+ G + +KG+ +GA DY+ KP EE+K + V+R
Sbjct: 80 IDGFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRYGADDYISKPCNFEEVKLRIEAVLR 139
Query: 133 RKK 135
R +
Sbjct: 140 RTQ 142
>gi|336316621|ref|ZP_08571513.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
gi|335879086|gb|EGM76993.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
Length = 1056
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 1 MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNK 60
+ +++ D+ LR+L VDD +LL ++ CQ+HV AL+LL+ K+
Sbjct: 814 IATDNIEEDRVVEPLRILVVDDHDVNRMLLVRMVEYCQHHVKACGDGKQALELLQ--KHH 871
Query: 61 FDLVISDVHMPDMDGFKLLELVGLE---MDLPVIMLSGNGDPKLVMKGITHGACDYLLKP 117
FDLVI+D +MP MDG++L + L+ D+PV L+ + + K + + G + L KP
Sbjct: 872 FDLVITDCNMPVMDGYQLTSAIRLDPILKDIPVFGLTASAENKERQRCLHAGMNECLFKP 931
Query: 118 VRIEELKNIWQHVVR 132
+ I EL+ +++ ++
Sbjct: 932 IGIAELQQVFKAYLK 946
>gi|239906625|ref|YP_002953366.1| NtrC family two-component response regulator [Desulfovibrio
magneticus RS-1]
gi|239796491|dbj|BAH75480.1| putative NtrC family two-component response regulator
[Desulfovibrio magneticus RS-1]
Length = 460
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDDP L +LE L Y V + + AL++L ++ LVISD+ MP MDG
Sbjct: 12 ILVVDDDPHILEVLEVRLVSAGYDVVPAANGLEALEVL--SRQPVRLVISDMRMPGMDGM 69
Query: 77 KLLELVGLEMD-----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEEL 123
++LE EM+ LP+I L+ +G ++ I HGA DYL KP +EL
Sbjct: 70 RMLE----EMERRGIKLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 117
>gi|119511035|ref|ZP_01630155.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
gi|119464286|gb|EAW45203.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
Length = 242
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T AL+ R K++ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSEPDLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|293572888|ref|ZP_06683838.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E980]
gi|431081373|ref|ZP_19495463.1| DNA-binding response regulator [Enterococcus faecium E1604]
gi|431122713|ref|ZP_19498410.1| DNA-binding response regulator [Enterococcus faecium E1613]
gi|431738695|ref|ZP_19527637.1| DNA-binding response regulator [Enterococcus faecium E1972]
gi|291607016|gb|EFF36388.1| alkaline phosphatase synthesis transcriptional regulatory protein
phoP [Enterococcus faecium E980]
gi|430565305|gb|ELB04451.1| DNA-binding response regulator [Enterococcus faecium E1604]
gi|430567658|gb|ELB06735.1| DNA-binding response regulator [Enterococcus faecium E1613]
gi|430596808|gb|ELB34620.1| DNA-binding response regulator [Enterococcus faecium E1972]
Length = 222
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
R+L V+DDP LL ++L R + V T ALK L + +L+I+D+ MP MDG
Sbjct: 3 RILIVEDDPQLQLLYRSVLERAGFSVITALNGEDALKKL--ETTRIELIITDIMMPKMDG 60
Query: 76 FKLLE-LVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
+ LL+ L D PV+M++ D + +G GA DY+ KP+ + E+ + ++RR
Sbjct: 61 YDLLDSLRSTRFDTPVLMITAKADFEDKKRGFKLGADDYMTKPIDVNEMILRVEALLRRS 120
Query: 135 KI 136
KI
Sbjct: 121 KI 122
>gi|218781592|ref|YP_002432910.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
gi|218762976|gb|ACL05442.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
Length = 308
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
VL VDDD L ++ Y A +AL++L ++ +LV++D+HMPDM+G
Sbjct: 11 VLIVDDDKPAREALYEMVLTAGYKAAAAPSAESALEIL--ARHPVELVLTDIHMPDMNGL 68
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKI 136
+L V D V++L+G D + I GA D+LLKPVR+ ELK Q V R +++
Sbjct: 69 ELTAAVKERFDADVVVLTGFADSHTYEEAIGRGASDFLLKPVRLPELKARIQRVFRERRL 128
>gi|291534760|emb|CBL07872.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Roseburia intestinalis
M50/1]
Length = 220
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
>gi|240146411|ref|ZP_04745012.1| subtilin biosynthesis regulatory protein SpaR [Roseburia
intestinalis L1-82]
gi|257201459|gb|EEU99743.1| subtilin biosynthesis regulatory protein SpaR [Roseburia
intestinalis L1-82]
gi|291526354|emb|CBK91941.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Eubacterium rectale DSM
17629]
gi|291526803|emb|CBK92389.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Eubacterium rectale
M104/1]
Length = 220
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+P L ++E++L + + VT S LK+ E +++DL++ D+ MP +DG
Sbjct: 3 KILAVDDEPAILEMIESILNKDGHLVTKVSNP---LKINMEELHRYDLILLDIMMPGIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
F+L + + +D P++ L+ + ++ G++ GA DY+ KP + EL+ +RR+
Sbjct: 60 FELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPFGVMELRARINAHLRRE 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,997,390,165
Number of Sequences: 23463169
Number of extensions: 494316910
Number of successful extensions: 2653623
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20532
Number of HSP's successfully gapped in prelim test: 77480
Number of HSP's that attempted gapping in prelim test: 2480974
Number of HSP's gapped (non-prelim): 154266
length of query: 663
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 514
effective length of database: 8,863,183,186
effective search space: 4555676157604
effective search space used: 4555676157604
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)