Citrus Sinensis ID: 006057

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660---
MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS
ccCCcccccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHcccccEEEEEcccccHHHHHHHcccccCEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccc
********DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAK********************************************************TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVA*****************LRMSSVNGLGNYHTVGG**************************************************************************************************************D*******************************************************************************************************************************FQAVQDAPCRSNVMFSPLNSA****G*VGPLGQCL*TNKTF***SNEFDSLGQSN********************************************SLEDLFMSSM*********VPEGNFGCSSYS
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MTVEHVNGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKEEQDKVLVPEGNFGCSSYS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Two-component response regulator ARR12 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins.probableP62598

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W25, chain A
Confidence level:very confident
Coverage over the Query: 15-135
View the alignment between query and template
View the model in PyMOL
Template: 1IRZ, chain A
Confidence level:very confident
Coverage over the Query: 196-258
View the alignment between query and template
View the model in PyMOL
Template: 3F7A, chain A
Confidence level:probable
Coverage over the Query: 17-176
View the alignment between query and template
View the model in PyMOL