BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006065
(662 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359489412|ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 690
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/627 (74%), Positives = 540/627 (86%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDVSPSMH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVSPSMHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYEHV VL+ IKVVDG LV++L+ LP+GT AGDFLDAIVVG+DMLIKK+G T KGK
Sbjct: 61 KEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT ALCP+KDP GTKEDQ+ TIA QM A G++++ IV R LSG MR++ EN
Sbjct: 121 KRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL +FS K++AKTL+V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT
Sbjct: 181 DLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+FPTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PIS
Sbjct: 241 EERFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P
Sbjct: 361 MNKVAILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SWQPNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LERFY HLELKS+H DAA P
Sbjct: 421 ASWQPNEEQQEAADNLVKMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKSKHPDAAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD+SLKKITEPDP LL++++ IDAF +F +KENPKLKKSTRR LRE+PSG +E
Sbjct: 481 PLDESLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPSGLNEEASM 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
G SD QA+ S+E+ V V+KIGD TPIQDFEAMMS RD P+WV KAI +MKNKIF L+
Sbjct: 541 GDGSDGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEMKNKIFDLV 600
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
E+S EG NY KA+E LVALRKGC+LEQ
Sbjct: 601 EDSYEGDNYLKALEYLVALRKGCVLEQ 627
>gi|255541318|ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus communis]
gi|223548903|gb|EEF50392.1| ku P80 DNA helicase, putative [Ricinus communis]
Length = 684
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/627 (74%), Positives = 537/627 (85%), Gaps = 6/627 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+LLLDV PSMH+VLP++E++CS LIQKKLIY K+ EVG+++FGTEET NELT
Sbjct: 1 MARNREGLILLLDVGPSMHNVLPEIERICSMLIQKKLIYSKSDEVGIVVFGTEETVNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGYEHV VLQ++KVVDG LV++L HLP+GT AGD+LDAIVVG+DM+IKKY T KGK
Sbjct: 61 VEVGGYEHVLVLQNMKVVDGDLVEALHHLPRGTVAGDYLDAIVVGMDMMIKKYQLTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLITDA P+K+P GTKEDQVSTIA QM A G+RM+ IVVR S + R++ EN
Sbjct: 121 KRLCLITDAGNPIKEPYEGTKEDQVSTIALQMAAHGVRMETIVVRGRPSQDIDQRIVDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LL++FS+K+SAKT++V+S TSL GA +TR+ISPVTIFRGDLE+S K+KIKVWVYKKT
Sbjct: 181 DHLLHLFSEKTSAKTVYVESPTSLLGALRTRNISPVTIFRGDLEISPKLKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK SDKAP TDK+ATHEVKVDYEYKSVEDP+KVVPP+QRIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKKRSDKAPPTDKYATHEVKVDYEYKSVEDPNKVVPPDQRIKGYRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAE +AVKFKPEKSVKLLGFTDA+NILRHYYMKDVN+FIAEPGN RAT+AVSALARAMKE
Sbjct: 301 SAELDAVKFKPEKSVKLLGFTDAANILRHYYMKDVNIFIAEPGNMRATIAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK PDSFYFNVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNLSEKDKTPDSFYFNVLPFAEDVREFQFPSFSNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SWQP+EQQQEAADNLV MLDLA GK E+L P+ TPNP LERFYHHLELKS+H DAA P
Sbjct: 421 ASWQPSEQQQEAADNLVMMLDLATPGKEEVLLPDFTPNPILERFYHHLELKSKHPDAAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +LKKITEPDP LL+ ++S IDAFC F +KENPK KKSTRRFLREKPSGSD+
Sbjct: 481 PLDRTLKKITEPDPELLSGNKSVIDAFCRSFEVKENPKRKKSTRRFLREKPSGSDDDRDY 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
G S A A+ S + V+KIGD P+QDFEAM+SRRD PDWV KAI+DMKNKI+ ++
Sbjct: 541 GDSSIALAIKSGD------VEKIGDSNPVQDFEAMLSRRDNPDWVGKAIKDMKNKIYSIV 594
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
EN EG NYP+A+E L ALRKGCILEQ
Sbjct: 595 ENCYEGNNYPRALECLAALRKGCILEQ 621
>gi|296089149|emb|CBI38852.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/610 (74%), Positives = 524/610 (85%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKV
Sbjct: 1 MHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VDG LV++L+ LP+GT AGDFLDAIVVG+DMLIKK+G T KGKK LCLIT ALCP+KDP
Sbjct: 61 VDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPY 120
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTKEDQ+ TIA QM A G++++ IV R LSG MR++ END LL +FS K++AKTL+
Sbjct: 121 EGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLY 180
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT EE+FPTLK+YSD+AP T
Sbjct: 181 VETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTAEERFPTLKQYSDQAPPT 240
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PISSAEWEAVKFKPEK VKL
Sbjct: 241 DKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEWEAVKFKPEKGVKL 300
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKEMNKVAI+RCVWRQGQ S
Sbjct: 301 LGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKEMNKVAILRCVWRQGQGS 360
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P SWQPNE+QQEAADNLV
Sbjct: 361 VVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLPASWQPNEEQQEAADNLV 420
Query: 438 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
KMLDLAPSG E L P+LTPNP LERFY HLELKS+H DAA PPLD+SLKKITEPDP LL
Sbjct: 421 KMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKSKHPDAAVPPLDESLKKITEPDPKLL 480
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
++++ IDAF +F +KENPKLKKSTRR LRE+PSG +E G SD QA+ S+E+
Sbjct: 481 SQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPSGLNEEASMGDGSDGQAIKSIENTST 540
Query: 558 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 617
V V+KIGD TPIQDFEAMMS RD P+WV KAI +MKNKIF L+E+S EG NY KA+E LV
Sbjct: 541 VGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEMKNKIFDLVEDSYEGDNYLKALEYLV 600
Query: 618 ALRKGCILEQ 627
ALRKGC+LEQ
Sbjct: 601 ALRKGCVLEQ 610
>gi|224130002|ref|XP_002320725.1| predicted protein [Populus trichocarpa]
gi|222861498|gb|EEE99040.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/645 (71%), Positives = 535/645 (82%), Gaps = 26/645 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV P+M+SVLP+++K+CS LIQKKLIYGK EVGV++FGT+ET+NELT
Sbjct: 1 MARNKEGLVLLLDVGPTMYSVLPEIKKVCSMLIQKKLIYGKFDEVGVVVFGTQETDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF------------------LDAI 102
KEVGGYEHV VL++IKVVDG LV + + LP+G GD LDAI
Sbjct: 61 KEVGGYEHVVVLRNIKVVDGDLVDAFQELPRGNFDGDCIHWIFLYYLFWKFMLCADLDAI 120
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VVG+DMLIKKY T KGKK LCLIT+ALCP+KD GTKEDQV+TIA QM A G++M+++
Sbjct: 121 VVGMDMLIKKYQATNKGKKRLCLITNALCPIKDSCEGTKEDQVNTIAAQMSAHGMKMESV 180
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+VR L G R++ END LLN+FS+K+SA+ ++V+S T+L GA KTR+ISPVTIFRGD
Sbjct: 181 IVRGRLCGGGDQRIMAENDRLLNLFSEKTSARAVYVESPTALLGAVKTRNISPVTIFRGD 240
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
LEL KMKIKVWVYKKT EEKFPTLKKYSDKAP TD+FATHEVKVDYEYKSVEDP+KVVP
Sbjct: 241 LELGSKMKIKVWVYKKTSEEKFPTLKKYSDKAPPTDRFATHEVKVDYEYKSVEDPNKVVP 300
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
PEQRIKGYRYGPQVVPISSAEW+AVKFKPEKSVKLLGFTDASNI+RHYYMKDVN+FI EP
Sbjct: 301 PEQRIKGYRYGPQVVPISSAEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEP 360
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVL 402
GN+RA +AVSALARAMKEMNKVAI+RCVWRQGQ SVVVGVLTPN+SEK + PDSFYFNVL
Sbjct: 361 GNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVL 420
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFAEDVREFQFPSFS FP SWQPNEQQQEAADNLVKMLDLAPS K E L P+ TPNP LE
Sbjct: 421 PFAEDVREFQFPSFSSFPASWQPNEQQQEAADNLVKMLDLAPSTKQEALLPDFTPNPVLE 480
Query: 463 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 522
RFY HLELKS+H DAA PPLD++LK ITE DP LL+E ++ +DAF F +KENP+LKKS
Sbjct: 481 RFYRHLELKSKHPDAAVPPLDETLKTITEADPDLLSEKKNVMDAFYKSFELKENPRLKKS 540
Query: 523 TRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCP 582
++R L +KPSGSDE + D + N++ KP V V+KIGD +P+QDFEAMMS RD P
Sbjct: 541 SKRLLEKKPSGSDEDHQDTT-------NALVVKP-VKVEKIGDSSPVQDFEAMMSCRDSP 592
Query: 583 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
DWV KAI+DMKNKI+ L+ENS +G N+ KA+E L+ALRKGCILEQ
Sbjct: 593 DWVSKAIQDMKNKIYSLVENSYDGDNHGKALECLLALRKGCILEQ 637
>gi|449433125|ref|XP_004134348.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/627 (69%), Positives = 525/627 (83%), Gaps = 1/627 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LFGTE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GDFLDAI+VG+DMLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LERFY HLE+KS+ DAA P
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKSKDPDAAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +L+KITEPDP L +++QS I+ F +F +KENPKLKKS R +LREK SGS + +
Sbjct: 481 PLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKASGSSDKEDN 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+S AQ V S+ + P V V+KIGD TP++DFEAMMSRRD P+W+ KAI M +KIF L+
Sbjct: 541 EEIS-AQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMMSKIFDLI 599
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
+NS++G +Y KA+E L ALRKGCI+EQ
Sbjct: 600 KNSSDGHSYTKAIEYLRALRKGCIIEQ 626
>gi|449525249|ref|XP_004169630.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/627 (69%), Positives = 524/627 (83%), Gaps = 1/627 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LF TE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFRTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GDFLDAI+VG+DMLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LERFY HLE+KS+ DAA P
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKSKDPDAAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +L+KITEPDP L +++QS I+ F +F +KENPKLKKS R +LREK SGS + +
Sbjct: 481 PLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKASGSSDKEDN 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+S AQ V S+ + P V V+KIGD TP++DFEAMMSRRD P+W+ KAI M +KIF L+
Sbjct: 541 EEIS-AQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMMSKIFDLI 599
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
+NS++G +Y KA+E L ALRKGCI+EQ
Sbjct: 600 KNSSDGHSYTKAIEYLRALRKGCIIEQ 626
>gi|357469575|ref|XP_003605072.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
gi|355506127|gb|AES87269.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
Length = 683
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/627 (67%), Positives = 524/627 (83%), Gaps = 7/627 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GDFLDA++V +DMLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP KVVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDKVVPPDQRIKGYRYGPQIIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L RFYH+L+LKS+H DA+ P
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVLARFYHYLDLKSKHPDASVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +L+KITEP+ L+ ++QS ID++ F ++ NP LKK RRFLR K S + G
Sbjct: 481 PLDYTLRKITEPETDLVLQNQSVIDSYRRSFEMQGNP-LKKP-RRFLRGKTSDEE---GK 535
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+++ A N +E + V+KIGDLTP+QDFEAM+SRRD PDWV KAI+DMK+KIF ++
Sbjct: 536 ENIT-APPANLIEYTS-IKVEKIGDLTPVQDFEAMISRRDSPDWVVKAIKDMKDKIFDMV 593
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
E+S+EG NYPKA++ LVALRKGCILEQ
Sbjct: 594 EDSHEGDNYPKALDCLVALRKGCILEQ 620
>gi|19401142|gb|AAL87543.1|AF293343_1 KAP-2 [Medicago truncatula]
Length = 683
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/627 (67%), Positives = 523/627 (83%), Gaps = 7/627 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GDFLDA++V +DMLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP VVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDIVVPPDQRIKGYRYGPQIIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L RFYH+L+LKS+H DA+ P
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVLARFYHYLDLKSKHPDASVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +L+KITEP+ L+ ++QS ID++ F ++ NP LKK RRFLR K S + G
Sbjct: 481 PLDYTLRKITEPETDLVLQNQSVIDSYRRSFEMQGNP-LKKP-RRFLRGKTSDEE---GK 535
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+++ A N +E + V+KIGDLTP+QDFEAM+SRRD PDWV KAI+DMK+KIF ++
Sbjct: 536 ENIT-APPANLIEYTS-IKVEKIGDLTPVQDFEAMISRRDSPDWVVKAIKDMKDKIFDMV 593
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
E+S+EG NYPKA++ LVALRKGCILEQ
Sbjct: 594 EDSHEGDNYPKALDCLVALRKGCILEQ 620
>gi|225453905|ref|XP_002273329.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 688
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/650 (66%), Positives = 528/650 (81%), Gaps = 9/650 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M R +EAL+LLLDVSP MH+ LP+VEKLC L+QKKLIY K VG++LFGT+ T+NELT
Sbjct: 1 MIRNQEALVLLLDVSPPMHNFLPEVEKLCFMLLQKKLIYNKKDLVGIVLFGTKVTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K+VGGY++V V QDIKVVDG LV++++ LP+GT AGDFLDAIVVG+DMLIKK+ T +GK
Sbjct: 61 KKVGGYKYVLVSQDIKVVDGDLVEAVRELPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGK 120
Query: 121 --KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
K LCLIT ALCP K P G KED++ TIA QM A G+R++ IV R LSG +MR++
Sbjct: 121 IKKRLCLITSALCPTKGPYKGAKEDEIGTIAEQMTAHGIRLECIVARGRLSGNMNMRIME 180
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
END LL +FSKK+ AKT++V+S TSL GA +TR+++PVTIFRGDLELS KM+IKVWVYKK
Sbjct: 181 ENDLLLKLFSKKTIAKTVYVESPTSLLGALRTRNVAPVTIFRGDLELSPKMEIKVWVYKK 240
Query: 239 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVP 298
+ EE P LK YSD+AP TDKFATHEV+V+ +YKSVEDP+KVVP QRI+GY YGPQVVP
Sbjct: 241 SAEE-LPVLKLYSDEAPPTDKFATHEVRVNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVP 299
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
ISSAEWEAVKF+PEK VKLLGFTDASNI+RHYY KDVN+FIAEPGN++A +AVSALARAM
Sbjct: 300 ISSAEWEAVKFEPEKGVKLLGFTDASNIMRHYYKKDVNIFIAEPGNTKAILAVSALARAM 359
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
KEMNKVAI+RCVWR+ Q++V++G+LTPNVSEK ++PDSFYFNVLP+AEDV+EFQFPSFS
Sbjct: 360 KEMNKVAILRCVWRRKQRNVIIGILTPNVSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSN 419
Query: 419 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAA 478
P+SWQPNE+QQEAAD+LV+ML LAP G+ E L P++TPNP LERFY +LELKS+ AA
Sbjct: 420 LPLSWQPNEEQQEAADDLVQMLYLAPFGREESLLPDVTPNPVLERFYRYLELKSKKPYAA 479
Query: 479 PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPN 538
PP+D +LK ITEPDP LLA+++S ID F +F +K+NPKLKKST R++ SG E
Sbjct: 480 VPPVDKTLKTITEPDPKLLAQNKSIIDEFKRRFELKQNPKLKKST----RDRQSGVKEEA 535
Query: 539 GDGSVSDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIF 597
G SDA A+NS+E+ V+T V KIGD TPIQDFEAMMS R+ P+WV KAI++MKNKIF
Sbjct: 536 NIGESSDAGAINSVENTSVITMVKKIGDSTPIQDFEAMMSHRESPEWVGKAIKEMKNKIF 595
Query: 598 GLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFLLW-FAFAFWDN 646
L++NSNE N+ KA++ LVA RKGCILEQ + FLL + F + N
Sbjct: 596 DLVQNSNERDNHLKALDCLVAFRKGCILEQKPTEFNNFLLHIYKFCKYHN 645
>gi|356512141|ref|XP_003524779.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Glycine
max]
Length = 687
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/640 (65%), Positives = 518/640 (80%), Gaps = 6/640 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH L ++EK+CS L+ KKLIY K EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPALSEIEKVCSMLVHKKLIYSKYDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL++IKVVDG +V++L+ LP+GT GDFLDA++VG+D+L+KK+G T KGK
Sbjct: 61 TEVGGYQHVVVLKNIKVVDGDIVEALQQLPRGTTDGDFLDAVIVGMDVLVKKFGVTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A C +K+ D GTKE+QV+TIA+QM A G++M++I++R LS + + ++ EN
Sbjct: 121 KRVCLITNAQCQIKESDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++S + L+V++ SL GA +TR+I+ VT+FRG LE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYVENPISLFGALRTRNIALVTVFRGHLEISPKLSIKVMVYKKTT 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFP++KKYSDKAP DKFA HEVK+DYE+KS +DP KVVPP+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPSMKKYSDKAPPNDKFAKHEVKIDYEHKSSKDPDKVVPPDQRIKGYPYGPQIVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKL+GFTD+SN+ RH+YMKDV +F+ EPGN+RA +AVSA+ARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLMGFTDSSNVFRHHYMKDVYVFLPEPGNTRAMIAVSAVARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSF+ FP
Sbjct: 361 MNKVAIVRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFTNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SWQPN QQ EAA NL+K LDLAP G+ E+L P+ TPNP LERFY +LELKS+ D A P
Sbjct: 421 ASWQPNGQQLEAAANLIKTLDLAPHGQEEVLLPDFTPNPVLERFYRYLELKSKDPDVAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD +LKKITEPD LL +++S ID+FC F +K NP LKKS RR L K S S++
Sbjct: 481 PLDGTLKKITEPDTDLLLQNKSEIDSFCRSFELKGNP-LKKS-RRLLGGKRSFSNDEEVK 538
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
G+++ AQ N + V V KIGDLTP+Q FEA++SRRD PDWV KAI +MKNKIF L+
Sbjct: 539 GNIT-AQPAN-LTGNASVNVGKIGDLTPVQYFEALISRRDSPDWVVKAINEMKNKIFDLV 596
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL--LW 638
E+S+EG NYPKA+E LVALRKGCILEQ + FL LW
Sbjct: 597 EDSHEGDNYPKALECLVALRKGCILEQEPEQFNDFLKHLW 636
>gi|19401144|gb|AAL87544.1|AF293344_1 KAP-2 [Phaseolus vulgaris]
Length = 686
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/628 (64%), Positives = 508/628 (80%), Gaps = 5/628 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMH VLP++EK CS L+QKKL++ KN EVG++LFGTE+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHYVLPEIEKACSLLVQKKLVFSKNDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL++ KVVDG +V++L+HLP+GT GDF+DA++VG+++LIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVLKNTKVVDGDIVEALQHLPRGTTDGDFVDAVIVGMNLLIKKFGQTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A CP+K+ GTKE+QV+TIA+Q+ A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRICLITNAQCPIKESYEGTKEEQVTTIAKQLTAHGMKMESIIVRGKLSQDANKGIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LLNIFSK++S + L++++ SL GA KTR+I+ VT+FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYLENPISLFGALKTRNITLVTVFRGDLEISPKLSIKVMVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK-VVPPEQRIKGYRYGPQVVPI 299
EEKFPTLKKY+DKAP DKFAT EVK+DYEYKS EDP K VVPP+QRI+GY YGPQ+VP+
Sbjct: 241 EEKFPTLKKYTDKAPPNDKFATREVKIDYEYKSSEDPDKVVVPPDQRIRGYPYGPQIVPL 300
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
S++ W+A KF PEK VKLLGFTD+SN+ RH+YMKDV +F+ +PGN+RA +AVS+LARAMK
Sbjct: 301 STSHWDAFKFLPEKGVKLLGFTDSSNVFRHHYMKDVYVFLPQPGNTRAMLAVSSLARAMK 360
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
EM+KVAI+RCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQF SFS F
Sbjct: 361 EMDKVAILRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFHSFSNF 420
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
P SW PN QQ EAA NLVK LDLAP G+ E+L P+ T NP LERFY LE KS+ D A
Sbjct: 421 PASWLPNGQQLEAAANLVKALDLAPDGQEEVLLPDFTANPVLERFYRFLEQKSKDPDIAV 480
Query: 480 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 539
PPLDD+LKKITEPD LL +++S ID+FC F +K NP LKKS R F ++ +DE
Sbjct: 481 PPLDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGNP-LKKSRRLFGGKRSFSNDEEIK 539
Query: 540 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 599
+ A+ N +E+ V V+KIGDLTP QDFEA++SRRD PDWV KAI +MKNKIF L
Sbjct: 540 ENIT--AEPPNLIENAS-VKVEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDL 596
Query: 600 LENSNEGINYPKAVELLVALRKGCILEQ 627
+E+S+EG NYPKA+E LV LRKGCILEQ
Sbjct: 597 VEDSHEGDNYPKALECLVVLRKGCILEQ 624
>gi|296089148|emb|CBI38851.3| unnamed protein product [Vitis vinifera]
Length = 690
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/622 (65%), Positives = 501/622 (80%), Gaps = 12/622 (1%)
Query: 29 CSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
C R + LIY K VG++LFGT+ T+NELTK+VGGY++V V QDIKVVDG LV++++
Sbjct: 34 CRR---RHLIYNKKDLVGIVLFGTKVTKNELTKKVGGYKYVLVSQDIKVVDGDLVEAVRE 90
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK--KHLCLITDALCPLKDPDVGTKEDQVS 146
LP+GT AGDFLDAIVVG+DMLIKK+ T +GK K LCLIT ALCP K P G KED++
Sbjct: 91 LPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGKIKKRLCLITSALCPTKGPYKGAKEDEIG 150
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 206
TIA QM A G+R++ IV R LSG +MR++ END LL +FSKK+ AKT++V+S TSL G
Sbjct: 151 TIAEQMTAHGIRLECIVARGRLSGNMNMRIMEENDLLLKLFSKKTIAKTVYVESPTSLLG 210
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 266
A +TR+++PVTIFRGDLELS KM+IKVWVYKK+ EE P LK YSD+AP TDKFATHEV+
Sbjct: 211 ALRTRNVAPVTIFRGDLELSPKMEIKVWVYKKSAEE-LPVLKLYSDEAPPTDKFATHEVR 269
Query: 267 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+ +YKSVEDP+KVVP QRI+GY YGPQVVPISSAEWEAVKF+PEK VKLLGFTDASNI
Sbjct: 270 VNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVPISSAEWEAVKFEPEKGVKLLGFTDASNI 329
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
+RHYY KDVN+FIAEPGN++A +AVSALARAMKEMNKVAI+RCVWR+ Q++V++G+LTPN
Sbjct: 330 MRHYYKKDVNIFIAEPGNTKAILAVSALARAMKEMNKVAILRCVWRRKQRNVIIGILTPN 389
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
VSEK ++PDSFYFNVLP+AEDV+EFQFPSFS P+SWQPNE+QQEAAD+LV+ML LAP G
Sbjct: 390 VSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSNLPLSWQPNEEQQEAADDLVQMLYLAPFG 449
Query: 447 KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 506
+ E L P++TPNP LERFY +LELKS+ AA PP+D +LK ITEPDP LLA+++S ID
Sbjct: 450 REESLLPDVTPNPVLERFYRYLELKSKKPYAAVPPVDKTLKTITEPDPKLLAQNKSIIDE 509
Query: 507 FCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT-VDKIGD 565
F +F +K+NPKLKKST R++ SG E G SDA A+NS+E+ V+T V KIGD
Sbjct: 510 FKRRFELKQNPKLKKST----RDRQSGVKEEANIGESSDAGAINSVENTSVITMVKKIGD 565
Query: 566 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
TPIQDFEAMMS R+ P+WV KAI++MKNKIF L++NSNE N+ KA++ LVA RKGCIL
Sbjct: 566 STPIQDFEAMMSHRESPEWVGKAIKEMKNKIFDLVQNSNERDNHLKALDCLVAFRKGCIL 625
Query: 626 EQVYLSVSFFLLW-FAFAFWDN 646
EQ + FLL + F + N
Sbjct: 626 EQKPTEFNNFLLHIYKFCKYHN 647
>gi|18402015|ref|NP_564520.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
gi|75172082|sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|12006422|gb|AAG44851.1|AF283758_1 Ku80-like protein [Arabidopsis thaliana]
gi|332194121|gb|AEE32242.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
Length = 680
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/628 (62%), Positives = 495/628 (78%), Gaps = 13/628 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGYE+V VL++I+VVD + +K LP+GT AGDFLDA++VG+DMLIK YG +KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L+RFY +LELKS+ DA P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
P+D + K++ E DP L + ++S +D F G F +KENPKLKK+++R LR+KPSGSD+ +
Sbjct: 481 PMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
DA+ E+K +D +GD PIQDFEAM+SRRD DW +KAI MKN I L+
Sbjct: 541 MITYDAK-----ENK----IDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLV 591
Query: 601 EN-SNEGINYPKAVELLVALRKGCILEQ 627
EN ++EG KA+E ++ALRKGC+LEQ
Sbjct: 592 ENCTDEG---DKALECVLALRKGCVLEQ 616
>gi|297847048|ref|XP_002891405.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
gi|297337247|gb|EFH67664.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
Length = 680
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/628 (61%), Positives = 495/628 (78%), Gaps = 13/628 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+MHSVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMHSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGYE+V VL++I+VVD + + +K LP+GT AGDFLDA++VG+DMLIK YG KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAQKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRLCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LLN+FS + AKT+ V+S SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EE+ PTLK YSDKAP TDKFA HEVK+DY+YK + ++V+ PE+RIKG+RYG QV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKIDYDYKVTAESTEVIAPEERIKGFRYGRQVIPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MK+
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKQ 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
N VAIVRCVWR GQ + VVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNMVAIVRCVWRNGQGNAVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SW+P+EQQQ ADNLVKMLDLAPS K E+L+P+LTPNP L+RFY +LELKS+ D+A P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAKEEVLKPDLTPNPVLQRFYEYLELKSKSTDSALP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
P+D++ K++ E DP L++ ++S +D+F G F +KENPKLKK+++R LR+KPSGSD+ +
Sbjct: 481 PMDETFKRLIEQDPELISNNKSIMDSFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR 540
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+ E K +D +GD PIQDFEAM+SRRD DW +KAI MKN I L+
Sbjct: 541 MITYEPN-----EKK----IDVVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLV 591
Query: 601 EN-SNEGINYPKAVELLVALRKGCILEQ 627
EN ++EG KA+E ++ALRKGC+LEQ
Sbjct: 592 ENCTDEG---DKALECVLALRKGCVLEQ 616
>gi|61338429|gb|AAX43993.1| Ku80-like [Vigna radiata]
Length = 673
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/627 (62%), Positives = 497/627 (79%), Gaps = 17/627 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMHSVLP++EK CS L+QKK+IY KN EVG++LFG E+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHSVLPEIEKACSLLVQKKMIYSKNDEVGIVLFGAEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
EVGGY+HV VL+ IKVVDG ++++L+ LP+GT DFLDA++VG+DMLIKK+ +T KGK
Sbjct: 61 TEVGGYQHVVVLKKIKVVDGDILEALQQLPRGTTDADFLDAVIVGMDMLIKKFDQTNKGK 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT+A CP+K+P GTKE+QV+ IA+Q+ A G++M++I+ R L + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKEPYEGTKEEQVTIIAKQLTAHGMKMESIIFRGKLGQDANREIMDEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D+LLNIFSK++S + L++++ SL GA +TR+I+ VT FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DHLLNIFSKETSTRLLYLENPISLFGALRTRNITLVTTFRGDLEISPKLSIKVMVYKKTA 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP+ ++AT E+K+DYEYKS ED KV+ P+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPTLKKYSDKAPTNAQYATRELKIDYEYKSSEDRDKVLSPDQRIKGYPYGPQIVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+EW+AVKF+PEK VKLLGFTD+SNI RH+YMKDV +F+ +PGN+ A +A+SALARAMKE
Sbjct: 301 RSEWDAVKFQPEKGVKLLGFTDSSNIFRHHYMKDVYVFLPQPGNTGAMLALSALARAMKE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
M+KVAI+RCVWR+GQ +V +GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAILRCVWRKGQSNVSIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFSNFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
SW+PN QQ EAA NL+K LDLAP G+ E+L P+ T NP LERFY LELKS+ D A P
Sbjct: 421 ASWKPNGQQLEAAANLIKTLDLAPHGQAEVLLPDFTSNPVLERFYRFLELKSKDPDVAVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
P+DD+LKKITEPD LL +++S ID+FC F +K P LKKS RR K S +++ +
Sbjct: 481 PIDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGQP-LKKS-RRLWEGKRSSTNDIIEN 538
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
SV V+KIGDLTP QDFEA++SRRD PDWV KAI +MKNKIF L+
Sbjct: 539 ASVK---------------VEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDLV 583
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
E+S+EG NYPKA E LV LRKGCILEQ
Sbjct: 584 EDSHEGDNYPKAFECLVVLRKGCILEQ 610
>gi|12323098|gb|AAG51535.1|AC051631_15 hypothetical protein; 39910-36975 [Arabidopsis thaliana]
Length = 663
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/611 (62%), Positives = 481/611 (78%), Gaps = 13/611 (2%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL +E+GGYE+V VL++I+V
Sbjct: 1 MRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VD + +K LP+GT AGDFLDA++VG+DMLIK YG +KGKK +CLIT+A CP KDP
Sbjct: 61 VDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGKKRMCLITNAACPTKDPF 120
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI END+LL +FS + AKT+
Sbjct: 121 EGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLTLFSSNAIAKTVN 180
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK EE+ PTLK YSDKAP T
Sbjct: 181 VDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVAEERLPTLKMYSDKAPPT 240
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS + E +KFK +K +KL
Sbjct: 241 DKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPISPDQIETLKFKTDKGMKL 300
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE NKVAIVRCVWR GQ +
Sbjct: 301 LGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKETNKVAIVRCVWRNGQGN 360
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P SW+P+EQQQ ADNLV
Sbjct: 361 VVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLPSSWKPDEQQQAVADNLV 420
Query: 438 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
KMLDLAPS + E+L+P+LTPNP L+RFY +LELKS+ DA PP+D + K++ E DP L
Sbjct: 421 KMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLPPMDGTFKRLMEQDPELS 480
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
+ ++S +D F G F +KENPKLKK+++R LR+KPSGSD+ + DA+ E+K
Sbjct: 481 SNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNRMITYDAK-----ENK-- 533
Query: 558 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN-SNEGINYPKAVELL 616
+D +GD PIQDFEAM+SRRD DW +KAI MKN I L+EN ++EG KA+E +
Sbjct: 534 --IDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLVENCTDEG---DKALECV 588
Query: 617 VALRKGCILEQ 627
+ALRKGC+LEQ
Sbjct: 589 LALRKGCVLEQ 599
>gi|8778524|gb|AAF79532.1|AC023673_20 F21D18.26 [Arabidopsis thaliana]
Length = 707
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/655 (57%), Positives = 480/655 (73%), Gaps = 57/655 (8%)
Query: 18 MHSVLPDVEKLCSRLIQKK--------------------------LIYGKNHEVGVILFG 51
M SVLPDVEK CS L+QKK LIY K EVG+++FG
Sbjct: 1 MRSVLPDVEKACSMLLQKKVYDLFLLKLLFMNFGSFLIGFGLLLQLIYNKYDEVGIVVFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD-----FLDAIVVGV 106
TEET NEL +E+GGYE+V VL++I+VVD + +K LP+GT AGD LDA++VG+
Sbjct: 61 TEETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDCILLAILDALIVGM 120
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
DMLIK YG +KGKK +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R+
Sbjct: 121 DMLIKMYGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRS 180
Query: 167 SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELS 226
+LSG+ H RVI END+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++
Sbjct: 181 NLSGDAHERVIEENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEIN 240
Query: 227 EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQR 286
MKIKVWVYKK EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+R
Sbjct: 241 PTMKIKVWVYKKVAEERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEER 300
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
IKG+RYGPQV+PIS + E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P +
Sbjct: 301 IKGFRYGPQVIPISPDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEK 360
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
+ +AVSA+AR MKE NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAE
Sbjct: 361 SVLAVSAIAREMKETNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAE 420
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL----- 461
DVREF FPSF+K P SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L
Sbjct: 421 DVREFPFPSFNKLPSSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQVICQ 480
Query: 462 --------ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 513
+RFY +LELKS+ DA PP+D + K++ E DP L + ++S +D F G F +
Sbjct: 481 LILMKYFYQRFYEYLELKSKSTDATLPPMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEV 540
Query: 514 KENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 573
KENPKLKK+++R LR+KPSGSD+ + DA+ E+K +D +GD PIQDFE
Sbjct: 541 KENPKLKKASKRLLRDKPSGSDDEDNRMITYDAK-----ENK----IDIVGDANPIQDFE 591
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLEN-SNEGINYPKAVELLVALRKGCILEQ 627
AM+SRRD DW +KAI MKN I L+EN ++EG KA+E ++ALRKGC+LEQ
Sbjct: 592 AMISRRDKTDWTEKAITQMKNLIMKLVENCTDEG---DKALECVLALRKGCVLEQ 643
>gi|75226365|sp|Q75IP6.1|KU80_ORYSJ RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|41393254|gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
gi|108712190|gb|ABF99985.1| KAP-2, putative, expressed [Oryza sativa Japonica Group]
Length = 688
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/629 (61%), Positives = 470/629 (74%), Gaps = 6/629 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT GDFLDAIVVG+DMLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFG-NIKGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGFTD S+I RHY+MKDV F+ EPGN++A AVSALARAM E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVP 477
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PLD LKKITEPDP ++ I F +KENPK KK R R +G+D+
Sbjct: 478 PLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYTGADDQAKL 536
Query: 541 GSVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
A+ V E+ P +IGD P+QDFEAM+++R WV AIE+M+ I
Sbjct: 537 LEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITA 596
Query: 599 LLENSNEGINYPKAVELLVALRKGCILEQ 627
L+++S + N+ KA+E LVALRK CI+EQ
Sbjct: 597 LIQDSCDRDNHQKALECLVALRKACIIEQ 625
>gi|347357753|gb|AEO86624.1| Ku80 [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/640 (58%), Positives = 467/640 (72%), Gaps = 16/640 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM +M IV R + G H VI EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKRRATKMGCIVFREA--GVQHNSVICEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLDLKSKQPDANPP 477
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK--STRRFLREKPSG----S 534
PL L++ITEPDP ++ I F +KENPK KK + R P S
Sbjct: 478 PLHSCLRRITEPDPDVINYRAPLIQNLGKAFDLKENPKRKKARTQERLAYAGPDDQAKKS 537
Query: 535 DEPNGDGSVSDAQAVNSMESKPVVT-------VDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
++ G D QA ++ +++ + V KIGD+ P++DFEAM++ R WV K
Sbjct: 538 EDDAGKAMAIDDQAKDAEKARAIEVLFPSTEKVGKIGDVNPVKDFEAMLAERSSSTWVQK 597
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
A+E+MK L+ENS +G Y KA+E VALRK CI+EQ
Sbjct: 598 AMEEMKKYTTALIENSPQGDYYEKALECFVALRKACIIEQ 637
>gi|326500760|dbj|BAJ95046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/640 (58%), Positives = 468/640 (73%), Gaps = 16/640 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLDLKSKQPDANPP 477
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK--STRRFLREKPSG----S 534
PL L++ITEPDP ++ I F +KENPK KK + R P S
Sbjct: 478 PLHSCLRRITEPDPDVINYRAPLIQNLGKAFDLKENPKRKKARTQERLAYAGPDDQAKKS 537
Query: 535 DEPNGDGSVSDAQAVNSMESKPVVT-------VDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
++ G D QA ++ +++ + V KIGD+ P++DFEAM++ R WV K
Sbjct: 538 EDDAGKAMAIDDQAKDAEKARAIEVLFPSTEKVGKIGDVNPVKDFEAMLAERSSSTWVQK 597
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
A+E+MK L+ENS +G Y KA+E VALRK CI+EQ
Sbjct: 598 AMEEMKKYTTALIENSPQGDYYEKALECFVALRKACIIEQ 637
>gi|308052434|gb|ADO00729.1| Ku80 [Triticum aestivum]
Length = 706
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/645 (58%), Positives = 463/645 (71%), Gaps = 21/645 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH LP+VE +C+ L++KKL++ ++ EVGV+LFG +ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALPEVENVCTTLVRKKLVFHRSDEVGVVLFGAKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE+S KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVSSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P V+PP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVIPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I R Y+MKDVN F+ EPGN++A VAVSALARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRSYFMKDVNSFVPEPGNTKAMVAVSALARAMQE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAED+R+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDIRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLGLKSKQPDANPP 477
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS-TRRFLREKPSGSDEPNG 539
PLD L++ITEPDP ++ I F +KENPK KK+ T+ L +
Sbjct: 478 PLDSCLRRITEPDPDVINYRVPLIQNLGKSFELKENPKRKKARTQERLAYTDPDDQAKSS 537
Query: 540 DGSVSDAQAVNSMESKP-----------------VVTVDKIGDLTPIQDFEAMMSRRDCP 582
+ + A A + KP V KI D+ P++DFEAM++ R
Sbjct: 538 ENNAEKATAADGQAKKPEDPYAEKARAIEVMFPSTEKVGKIEDVNPVKDFEAMLAERSSS 597
Query: 583 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
WV KAIE+MK L+ENS +G Y KA++ VALRK CI+EQ
Sbjct: 598 IWVQKAIEEMKKYTTNLVENSLQGDYYEKALKCFVALRKACIIEQ 642
>gi|357116037|ref|XP_003559791.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 1
[Brachypodium distachyon]
Length = 689
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/629 (60%), Positives = 467/629 (74%), Gaps = 6/629 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L +VE +CS L++KKL+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGALQEVENVCSTLLRKKLVYNRSDEVGIVLFGTKETCNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V DIKVV+ +L++LP+GT GDFLDAIVVG+DMLIK++G T KGK
Sbjct: 61 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 178 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LERFY L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLERFYSFLDLKSKEPDANAP 477
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP--N 538
PLD L++ITEPD ++ I F +K+NPK KK+ + + D+ +
Sbjct: 478 PLDKCLRRITEPDSDIIDYQAPLIQNLGKAFELKDNPKRKKARTQERLNYTAADDQTKKS 537
Query: 539 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
D A+A+ + V KIGDL P+QDFEAM++ R WV KAIE+M+
Sbjct: 538 ADPYAEKAKAIEVLYPS-AEKVGKIGDLNPVQDFEAMLTERSSSIWVQKAIEEMQKYTTV 596
Query: 599 LLENSNEGINYPKAVELLVALRKGCILEQ 627
L+ENS +G Y KA+E +VALRK CI+EQ
Sbjct: 597 LIENSPQGDYYQKALECIVALRKACIIEQ 625
>gi|226495197|ref|NP_001147945.1| LOC100281554 [Zea mays]
gi|195614740|gb|ACG29200.1| KAP-2 [Zea mays]
Length = 681
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/627 (59%), Positives = 466/627 (74%), Gaps = 9/627 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITSAQELLRDPPEGTKEDQVDTIADMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPSDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S I DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNTIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 476
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PL+ SL++ITEPDP ++ + I FV+KENPK KK+ + L D+
Sbjct: 477 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKENPKKKKARTQELLAYTGAGDQAK-- 534
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 535 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 591
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
+NS++G NY KA+E +LRK CI+EQ
Sbjct: 592 QNSSDGGNYQKALECFASLRKACIIEQ 618
>gi|414874016|tpg|DAA52573.1| TPA: KAP-2 [Zea mays]
Length = 681
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 466/627 (74%), Gaps = 9/627 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 476
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + + D+
Sbjct: 477 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAYTGAGDQAK-- 534
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 535 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 591
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
+NS++G NY KA+E +LRK CI+EQ
Sbjct: 592 QNSSDGGNYQKALECFASLRKACIIEQ 618
>gi|365768469|gb|AEW90637.1| KU80-like protein [Pinus sylvestris]
Length = 710
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/660 (55%), Positives = 477/660 (72%), Gaps = 11/660 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYE+V V + IKVVD ++++L LP+G GDFLDAIVVG+D+LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLEL+ MKIKVWVYKKT
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLELTPIMKIKVWVYKKTY 240
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
+E+ PTLKKYSDKAP D +AT EVK+D EYKS E+P K +PPEQRIKG+ YGPQVVPIS
Sbjct: 241 QERIPTLKKYSDKAPPNDPYATREVKMDIEYKSREEPDKTIPPEQRIKGFNYGPQVVPIS 300
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
AE E +KFKPEK VKLLGFTDAS+I RH YMKD ++ IAEPGN++A +AVSA+ARAM+E
Sbjct: 301 MAEQETLKFKPEKGVKLLGFTDASSIPRHSYMKDTSILIAEPGNTKAILAVSAVARAMEE 360
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
KVAI+RCVWR+ Q +V++GVLTPN+S K N DSFYFN++PF ED+REF F SF FP
Sbjct: 361 TKKVAILRCVWRERQANVILGVLTPNISNKSNAADSFYFNIIPFVEDIREFPFASFDSFP 420
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QPN QQEAADN V+MLDLAP G+ E L PELT NP LERFY L+ KS DA P
Sbjct: 421 ASQQPNIVQQEAADNFVQMLDLAPPGREEALLPELTLNPILERFYSFLDTKSRRSDADVP 480
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
P+DD++K I EPDP L+A+++ +D FC QF +K NPK ++++F R+KPS S+E G
Sbjct: 481 PVDDAVKSIIEPDPELIAKNE--LDRFCSQFQLKMNPKKDNASKKFWRDKPSLSEEAAGK 538
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
+ D Q S +S ++IG LTP+QDFEAM++RRD +WV KAI +MK I LL
Sbjct: 539 EAGDDVQDGISFDSLAARKTEQIGSLTPVQDFEAMLARRDSDEWVPKAIREMKKLITDLL 598
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFLLWFAFAFWDNSC----LNDMSSIV 656
++S +G Y KA++ LVALR GC+ ++ + + F+ N+C LND ++
Sbjct: 599 DSSYKGNTYHKAMDCLVALRNGCVQQEEPIEFNNFMRELG-----NNCQGKRLNDFWELI 653
>gi|357116039|ref|XP_003559792.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 2
[Brachypodium distachyon]
Length = 677
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/629 (59%), Positives = 458/629 (72%), Gaps = 18/629 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++L+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGAL------------QELVYNRSDEVGIVLFGTKETCNDLA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V DIKVV+ +L++LP+GT GDFLDAIVVG+DMLIK++G T KGK
Sbjct: 49 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 107
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 108 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 165
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 166 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 225
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 226 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 285
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 286 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 345
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 346 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 405
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LERFY L+LKS+ DA P
Sbjct: 406 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLERFYSFLDLKSKEPDANAP 465
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP--N 538
PLD L++ITEPD ++ I F +K+NPK KK+ + + D+ +
Sbjct: 466 PLDKCLRRITEPDSDIIDYQAPLIQNLGKAFELKDNPKRKKARTQERLNYTAADDQTKKS 525
Query: 539 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
D A+A+ + V KIGDL P+QDFEAM++ R WV KAIE+M+
Sbjct: 526 ADPYAEKAKAIEVLYPS-AEKVGKIGDLNPVQDFEAMLTERSSSIWVQKAIEEMQKYTTV 584
Query: 599 LLENSNEGINYPKAVELLVALRKGCILEQ 627
L+ENS +G Y KA+E +VALRK CI+EQ
Sbjct: 585 LIENSPQGDYYQKALECIVALRKACIIEQ 613
>gi|223943233|gb|ACN25700.1| unknown [Zea mays]
gi|414874015|tpg|DAA52572.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 669
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/627 (59%), Positives = 458/627 (73%), Gaps = 21/627 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL + L+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLE------------LVYNRSDEVGIVLFGTKGTCNELA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
K++GGY+HV V+ DIKVVD Q+L++LP G+ GDFLD+IVVG+DM+I+K+G T KGK
Sbjct: 49 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 107
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 108 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 165
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 166 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 225
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 226 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 285
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 286 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 345
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 346 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 405
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 406 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 464
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
PL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + + D+
Sbjct: 465 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAYTGAGDQAK-- 522
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 523 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 579
Query: 601 ENSNEGINYPKAVELLVALRKGCILEQ 627
+NS++G NY KA+E +LRK CI+EQ
Sbjct: 580 QNSSDGGNYQKALECFASLRKACIIEQ 606
>gi|242037345|ref|XP_002466067.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
gi|241919921|gb|EER93065.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
Length = 670
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/612 (58%), Positives = 449/612 (73%), Gaps = 7/612 (1%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH VL +V+ +CS L+ KKL+Y ++ EVG++LFGT+ T NEL KE+GGY+HV V +DIKV
Sbjct: 1 MHGVLQEVKNICSTLVHKKLVYNRSDEVGIVLFGTKGTCNELAKELGGYKHVTVTRDIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
VD Q+L++LP G+ GDFLD+IVVG+DM+++K+G T KGK+ LCLIT A L+DP
Sbjct: 61 VDEGAAQALQNLPLGSAPGDFLDSIVVGLDMVMRKFGNT-KGKRRLCLITSAQDLLRDPP 119
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
GTKE+QV TIA + ++++ I+ R G V+ END LL F +S AK +
Sbjct: 120 EGTKEEQVDTIADMLKKHSIKLECIIFREP--GVLRNAVMEENDRLLYQFRNRSVAKVVQ 177
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
VDS TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT EEKFPTLKKYSDKAP +
Sbjct: 178 VDSPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTAEEKFPTLKKYSDKAPPS 237
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
DK A+HEVKVDYEYKSV +P K+VPP+QRIKGY YGPQV+P+S+AEWEAVKFKPEK VKL
Sbjct: 238 DKLASHEVKVDYEYKSVVEPDKIVPPDQRIKGYLYGPQVIPVSNAEWEAVKFKPEKGVKL 297
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
LGFTD SN+ RH++MKDV LFI EPGN +AT+AVSA+ARAM +MNK AIVRCVWRQGQ +
Sbjct: 298 LGFTDRSNVPRHHFMKDVCLFIPEPGNIKATLAVSAIARAMHQMNKAAIVRCVWRQGQGN 357
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
V +GVLTPN+S N+ DSFYFNVLPFAED+REFQF SFS P S QP E+QQEAADNLV
Sbjct: 358 VALGVLTPNISAVDNVQDSFYFNVLPFAEDIREFQFRSFSSLPSSSQPTEEQQEAADNLV 417
Query: 438 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
KMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA PPLD SL++ITEPDP ++
Sbjct: 418 KMLDLAPPGR-EVLKPEFTPNPMLERFYSYLDLKSKQPDANVPPLDRSLRRITEPDPNVV 476
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG--DGSVSDAQAVNSMESK 555
+ I F +KENPK KK+ + + D+ + SV + + +
Sbjct: 477 GQQTQLIQNLGKAFELKENPKKKKARGQDILAYTGAGDQAKSVEEPSVEKDRVLENTHP- 535
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 615
P V I D P+ DFEAM++ R WV KAIEDM+N LL+ S++G NY KA+E
Sbjct: 536 PTENVGAIRDSNPVHDFEAMLANRSSSTWVQKAIEDMQNYTAALLQKSHDGSNYQKALEC 595
Query: 616 LVALRKGCILEQ 627
ALRK CI+EQ
Sbjct: 596 FAALRKACIIEQ 607
>gi|222626200|gb|EEE60332.1| hypothetical protein OsJ_13430 [Oryza sativa Japonica Group]
Length = 643
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/637 (56%), Positives = 439/637 (68%), Gaps = 48/637 (7%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG-----------------------K 97
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 98 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 155
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT
Sbjct: 156 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTS 207
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 208 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 267
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVS 352
SAEWEAVKFKPEK ++ D SN RHY+MKDV F+ EPGN++A AVS
Sbjct: 268 SAEWEAVKFKPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVS 323
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAM EMNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQ
Sbjct: 324 ALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQ 383
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 472
F SFS P S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS
Sbjct: 384 FRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKS 443
Query: 473 EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS 532
+ DA PPLD LKKITEPDP ++ I F +KENPK KK R R +
Sbjct: 444 KQPDANVPPLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYT 502
Query: 533 GSDEPNGDGSVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIE 590
G+D+ A+ V E+ P +IGD P+QDFEAM+++R WV AIE
Sbjct: 503 GADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIE 562
Query: 591 DMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
+M+ I L+++S + N+ KA+E LVALRK CI+EQ
Sbjct: 563 EMQKYITALIQDSCDRDNHQKALECLVALRKACIIEQ 599
>gi|218194141|gb|EEC76568.1| hypothetical protein OsI_14396 [Oryza sativa Indica Group]
Length = 643
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/637 (56%), Positives = 439/637 (68%), Gaps = 48/637 (7%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG-----------------------K 97
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 98 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 155
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT
Sbjct: 156 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTS 207
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 208 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 267
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVS 352
SAEWEAVKFKPEK ++ D SN RHY+MKDV F+ EPGN++A AVS
Sbjct: 268 SAEWEAVKFKPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVS 323
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAM EMNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQ
Sbjct: 324 ALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQ 383
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 472
F SFS P S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS
Sbjct: 384 FRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKS 443
Query: 473 EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS 532
+ DA PPLD LKKITEPDP ++ I F +KENPK KK R R +
Sbjct: 444 KQPDANVPPLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYT 502
Query: 533 GSDEPNGDGSVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIE 590
G+D+ A+ V E+ P +IGD P+QDFEAM+++R WV AIE
Sbjct: 503 GADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIE 562
Query: 591 DMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
+M+ I L+++S + N+ KA+E LVALRK CI+EQ
Sbjct: 563 EMQKYITALIQDSCDRDNHQKALECLVALRKACIIEQ 599
>gi|147828533|emb|CAN68627.1| hypothetical protein VITISV_004463 [Vitis vinifera]
Length = 812
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/395 (76%), Positives = 343/395 (86%)
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
VWVYKKT E +FPTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRY
Sbjct: 348 VWVYKKTAEXRFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRY 407
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS 352
GPQV+PISSAEWEAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEPGN++A + VS
Sbjct: 408 GPQVIPISSAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPGNTKAMLTVS 467
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
ALARAMKEMNKVAI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQ
Sbjct: 468 ALARAMKEMNKVAILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQ 527
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 472
FPSFS P SWQPNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LERFY HLELKS
Sbjct: 528 FPSFSNLPASWQPNEEQQEAADNLVKMLDLAPSGSRETLLPDLTPNPVLERFYRHLELKS 587
Query: 473 EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS 532
+H DAA PPLD+SLKKITEPDP LL++++ IDAF +F +KENPKLKKSTRR R +PS
Sbjct: 588 KHPDAAVPPLDESLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLXRXRPS 647
Query: 533 GSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 592
G +E G SD QA+ S+E+ V V+KIGD TPIQDFEAMMSRRD P+WV KAI +M
Sbjct: 648 GLNEEASMGDGSDGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSRRDSPEWVGKAINEM 707
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
KNKIF L+E+S EG NY KA+E LVALRKGC+LEQ
Sbjct: 708 KNKIFDLVEDSYEGDNYLKALEYLVALRKGCVLEQ 742
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 161/198 (81%), Gaps = 2/198 (1%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
KLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKVVDG LV++L+ LP+GT A
Sbjct: 13 KLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVA 72
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
LDAIVVG+DMLIKK+G T KGKK LCLIT ALCP+KDP GTKEDQ+ TIA QM A
Sbjct: 73 --VLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAH 130
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G++++ IV R LSG MR++ END LL +FS K++AKTL+V++ TSL GA +TR I+P
Sbjct: 131 GMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAP 190
Query: 216 VTIFRGDLELSEKMKIKV 233
VTIFRGDLELS KM+IK+
Sbjct: 191 VTIFRGDLELSPKMRIKL 208
>gi|326524151|dbj|BAJ97086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 478
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/467 (65%), Positives = 370/467 (79%), Gaps = 3/467 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
+E+GGY+HV V DIKVVD +L++LP+GT GDFLDAIVVG+DMLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 467
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE Y++
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLEVEYYN 464
>gi|168035223|ref|XP_001770110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678636|gb|EDQ65092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 708
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 318/641 (49%), Positives = 435/641 (67%), Gaps = 20/641 (3%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIY-GKNHEVGVILFGTEETENELTKEVGGYE 67
+LLLDV PSMH L DV K + LI +K IY GKN EVGV+ FGT ET+NEL KE+ GY
Sbjct: 1 MLLLDVGPSMHPYLADVSKCMTTLIHRKAIYQGKNDEVGVVYFGTTETDNELNKEMEGYH 60
Query: 68 HVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLIT 127
++ V++ I VV L L+++P G + DFLD IVVG DML+KK GE KG K LCL+T
Sbjct: 61 NIVVVEPIAVVSQDLAHRLENIPCGFGSSDFLDVIVVGCDMLMKKLGENKKGNKRLCLVT 120
Query: 128 DALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF 187
DA P+++P GT EDQV IA +M G+++ +VVR + + +ND LL++F
Sbjct: 121 DAASPVREPSEGTVEDQVRNIAERMGEQGIKLDVVVVRVGQNFLINSTGQHQNDVLLDLF 180
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
+ A+ + TS+ G + R +SP T++RGD EL+ ++IKVWVYKKT +EK PTL
Sbjct: 181 KLHTQAEIGIARTATSMLGIIRPRAVSPTTLYRGDFELTPDLRIKVWVYKKTSQEKLPTL 240
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KKYS++AP++D AT EVK+D EYKS ++P VPPEQR K Y+YG +PISS+ +++
Sbjct: 241 KKYSNEAPASDSHATREVKIDTEYKSSDNPDVSVPPEQRTKAYKYGKNFIPISSSMEDSL 300
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
KFKPEK VKL GF S+I RHY++K+ ++F+ EPG+ ++ VAVSALARAMKE + A+V
Sbjct: 301 KFKPEKGVKLKGFVKRSDIPRHYFLKESSIFLPEPGHQKSIVAVSALARAMKEHDYAAVV 360
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
RCVWRQGQ +VV+G+L P VS + N+ D FYFNV+PF +D+REF+F SFS P S QP+
Sbjct: 361 RCVWRQGQTNVVMGILLPFVSAQENVADGFYFNVIPFLDDMREFRFTSFSSMPESLQPSC 420
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 487
+QQEAA NLV+MLDL+PS E+LQPE T NP L+RFY+ L L+S + +A PPLD+SL+
Sbjct: 421 EQQEAAYNLVRMLDLSPSEDEELLQPEQTINPVLQRFYYFLHLRSLNPEAKVPPLDESLR 480
Query: 488 KITEPDPTLLAESQSAIDAFCGQFV----IKENPK--LKKSTRR-----FLREKPSGSD- 535
I EPD L E+Q AI+ F Q I+EN K K RR ++++P+ D
Sbjct: 481 CIVEPDLLRLDENQYAINQFSQQLTLTPNIQENGKKSFWKGERRDGNVLQIKDEPAFMDV 540
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
+ GSVS NS+ S+ V++IG P+ DFEA+M+RRD P+WV KAI+ MK
Sbjct: 541 DMKNPGSVS----FNSLASR---KVEEIGSANPVADFEALMARRDSPEWVGKAIQGMKKM 593
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
I+ LL+++ G Y KA+ L++LR GC++++ L +FFL
Sbjct: 594 IYDLLDSAYNGNTYEKALACLISLRLGCVIQEEPLEFNFFL 634
>gi|302755234|ref|XP_002961041.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
gi|300171980|gb|EFJ38580.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
Length = 701
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/632 (46%), Positives = 421/632 (66%), Gaps = 24/632 (3%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
YE + V + I +VDG LV L+ LP+G AGD++DAIVV DM+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 124 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
CLITDA P+K+P G + +QV IA +M G+R ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVRFDAAILRMN---EEKRESGSESTE 176
Query: 183 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 242
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 243 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 302
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAMSALARALKQTN 356
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+RFYH L LKS + DA+ P L
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQRFYHFLYLKSLNPDASVPQL 476
Query: 483 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK-------PSGSD 535
D++LKK+ EPD +E + C QF +K K++ +F +++
Sbjct: 477 DETLKKVIEPD--FSSEHIEKLQGLCSQFTLK-----TKNSTKFWKDRIEAAAKDDDAEA 529
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
+P+ D S S S +S V+++G L P+QDF+ +++RRD +WV KAI+ MK
Sbjct: 530 KPDVDTSGSGL----SFDSFATRQVEEVGSLNPVQDFQTLLARRDSDEWVGKAIQGMKKI 585
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
I LL++S +G Y KA+ L ALR GC++++
Sbjct: 586 IIDLLDSSYKGNTYDKALTCLAALRSGCVMQE 617
>gi|302767102|ref|XP_002966971.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
gi|300164962|gb|EFJ31570.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
Length = 701
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 296/632 (46%), Positives = 420/632 (66%), Gaps = 24/632 (3%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
YE + V + I +VDG LV L+ LP+G AGD++DAIVV DM+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 124 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
CLITDA P+K+P G + +QV IA +M G++ ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVKFDAAILRMN---EEKRESGSESTE 176
Query: 183 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 242
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 243 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 302
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAISALARALKQTN 356
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+RFYH L LKS + DA P L
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQRFYHFLYLKSLNPDALVPQL 476
Query: 483 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK-------PSGSD 535
D++LKK+ EPD +E + C QF +K K++ +F +++
Sbjct: 477 DETLKKVIEPD--FSSEHIEKLQGLCSQFTLK-----TKNSTKFWKDRIEAAAKDDDAEA 529
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
+P+ D S S S +S V+++G L P+QDF+ +++RRD +WV KAI+ MK
Sbjct: 530 KPDVDTSGSGL----SFDSFATRQVEEVGSLNPVQDFQTLLARRDSDEWVGKAIQGMKKI 585
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
I LL++S +G Y KA+ L ALR GC++++
Sbjct: 586 IIDLLDSSYKGNTYDKALTCLAALRSGCVMQE 617
>gi|414874017|tpg|DAA52574.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 463
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/397 (62%), Positives = 300/397 (75%), Gaps = 6/397 (1%)
Query: 231 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY 290
+KVWVYKKT EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY
Sbjct: 10 LKVWVYKKTAEEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGY 69
Query: 291 RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 350
YGPQV+P+S+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++A
Sbjct: 70 LYGPQVIPVSNAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLA 129
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
VSA+ARAM +MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+RE
Sbjct: 130 VSAIARAMHQMNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIRE 189
Query: 411 FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL 470
FQF SFS P S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+L
Sbjct: 190 FQFRSFSSLPSSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDL 248
Query: 471 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK 530
KS+ DA PPL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + +
Sbjct: 249 KSKQPDANVPPLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAY 308
Query: 531 PSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIE 590
D+ SV D N+ S V I D P+QDFEAM+++R W KAI
Sbjct: 309 TGAGDQAK---SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIG 363
Query: 591 DMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQ 627
DM+N I LL+NS++G NY KA+E +LRK CI+EQ
Sbjct: 364 DMQNYIAALLQNSSDGGNYQKALECFASLRKACIIEQ 400
>gi|41393255|gb|AAS01978.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
Length = 325
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 260/328 (79%), Gaps = 3/328 (0%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KE+GGY+HV V +DIKVVD +L++LP+GT GDFLDAIVVG+DMLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNI-KGK 119
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 240
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILR 328
SAEWEAVKFKPEK VKLLGFTD S+I R
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISR 325
>gi|374351676|gb|AEZ36039.1| KU80, partial [Nicotiana benthamiana]
Length = 181
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/181 (80%), Positives = 167/181 (92%)
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
S KSS+K + V++ TSL GA +TR+ISPVTI+RGD E+S ++KIK WVYKKT EEKFPTL
Sbjct: 1 SNKSSSKVVHVETPTSLLGALRTRNISPVTIYRGDFEVSSQLKIKGWVYKKTSEEKFPTL 60
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KKYS+KAP TDKFATHE+KVDYEYKS+EDP+KVVPPEQRIKG+RYGPQVVPISSAE EAV
Sbjct: 61 KKYSEKAPPTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKGFRYGPQVVPISSAELEAV 120
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
KFKPEKSVKLLGFTDASNI+RHYY+KDVN+FIAEPGN +A +A+S+LARAMKEMNKVAIV
Sbjct: 121 KFKPEKSVKLLGFTDASNIMRHYYLKDVNIFIAEPGNKKAILALSSLARAMKEMNKVAIV 180
Query: 368 R 368
R
Sbjct: 181 R 181
>gi|328875870|gb|EGG24234.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 756
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 217/719 (30%), Positives = 349/719 (48%), Gaps = 79/719 (10%)
Query: 4 TREALLLLLDVSPSMH--------------------------------SVLPDVEKLCSR 31
T+EAL+++LD+ MH S + + K +
Sbjct: 6 TKEALVVILDIGLGMHKHHRSVGGGGISSSSSSLSSQSQHLLQSANNTSPIDEALKAATL 65
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
L Q+KLIYGK E+G++L GT+ET N L K+ GY+H+ +I+ ++ L+ +
Sbjct: 66 LFQQKLIYGKKDELGLVLIGTKETNNSLQKD--GYQHITTACNIEEPKVETLRFLESIQP 123
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
G GD +D+++V +DMLI K E K +K + L+T+A P+ D+ + Q +
Sbjct: 124 GESRGDVIDSLIVAMDMLIHK-TEKKKFQKRIFLVTNASDPINKDDLSILQQQFKNTDVK 182
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+ G+ + L + + +N+ L F + + + V + +++
Sbjct: 183 LNVVGVDFTD---EEDLENKIQLTEKEKNEVFLRRFVQSVNGILVPVKQALEIMSFFRSQ 239
Query: 212 DISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 271
+ T FRG LE+S + I VW Y +T + PTLKK S A D A+ EVK + +
Sbjct: 240 SVLSRTGFRGVLEISTEFGIPVWGYLRTKIQTLPTLKKVSTVAQQADNPASLEVKQEKLH 299
Query: 272 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
S+ DP K + +KGY+YG ++P S + EA+K K +K LGF AS+I H+
Sbjct: 300 YSITDPDKEILDHDLLKGYKYGKSIIPYSKIDIEALKLSASKCLKTLGFAPASHIPLHHL 359
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M + +A PG+ A +A+S + A+ E ++V IVR V R S +G L P++ K
Sbjct: 360 MGQTEVLVAPPGDQEAALALSGIIHALAETDQVIIVRFVKR-SNCSPYLGYLYPHI--KA 416
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPSGK 447
N + YFN LPF +D+R +QFP S K P +QP Q AA +L++ +DL + +
Sbjct: 417 NY-ECLYFNPLPFIDDIRHYQFPPISPKNPQCKKQYQPTADQLNAAHSLIESMDLMTADE 475
Query: 448 GE------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ L+P+ T NP+L+ F+ L ++ H P LD + K PD +L +
Sbjct: 476 DDEGQPMPSLRPKYTYNPSLQHFFQCLHHRALHPKTPLPSLDPLISKYINPDENILERAS 535
Query: 502 SAIDAFCGQFVIKENPKLKKSTRR-----FLREKPSGSDEPNG---DGS----VSDAQAV 549
AI F +F + + K + L E+ D G DGS +D A
Sbjct: 536 DAIKDFHSKFTLTKVNNFKSDHKYRWKDGMLIEEEIKLDSYIGQDDDGSKKKRKADDLAD 595
Query: 550 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 609
S++ V+++G + P+Q+F+ M++RRD D VDKAI M+++I L+ +S + Y
Sbjct: 596 YSLDKLVSGYVNEVGSINPVQNFKDMLARRDI-DLVDKAINLMRSRIVQLVNDSLKDQFY 654
Query: 610 PKAVELLVALRKGCILEQVYLSVSFFL--------------LWFAFAFWDNSCLNDMSS 654
KA+E +VALR+GCI E + + FL W W + +ND S
Sbjct: 655 QKALECVVALRQGCIKESESDAFNTFLQELRDYFESKKRDDFWQLLVTWKITLINDQES 713
>gi|330843657|ref|XP_003293765.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
gi|325075874|gb|EGC29713.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
Length = 769
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 351/703 (49%), Gaps = 87/703 (12%)
Query: 4 TREALLLLLDVSPSMHSVLP-----------DVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
++EA++++LDV M SVL D + + L Q+KLIY K E+G++L GT
Sbjct: 6 SKEAVVIVLDVGIGMTSVLSNNNNNETSPIEDALRSVTLLYQQKLIYSKKDELGLVLIGT 65
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKK 112
+ T+N L + GY+H+ V DI+ ++ L++L G GD +D+++V +DMLIK+
Sbjct: 66 KGTKNNLQDD--GYQHITVASDIEEPSIETLKYLENLGPGESKGDVIDSLIVAMDMLIKR 123
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
E K +K + L+T+A P+ D+ +DQ I ++ G+ + E
Sbjct: 124 -TENKKYQKRIFLVTNAKDPINTDDLTIVKDQFKKIDVKLNIIGV---------DFTDEE 173
Query: 173 HMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 224
++ I +N+ L F+ + V + +++ + T FRG LE
Sbjct: 174 ELKKINNKNFTNKQKNEIFLREFADSVDGVLVPVKQALEMMSFFRSQSVLQRTSFRGALE 233
Query: 225 LSEKMKIKVWVYKKTGEEKFPTLKKYS----DKAPSTDKFATHEVKVDYEYKSVEDPSKV 280
+S ++KI VW + K ++ PTLKK S +K P+ T +V + + S+ DP +
Sbjct: 234 ISPELKIPVWGFLKMKQQNLPTLKKISVLAQEKIPTP---TTLDVTQETFFYSITDPDQE 290
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKDVNLFI 339
+ + +KGY+YG ++P S + +K+ + +K+LGF D +I +Y M +F+
Sbjct: 291 ISKDDLLKGYKYGKSLIPFSKIDESQLKYSSASRCLKVLGFVDRDSIPLYYNMGCSEMFV 350
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV------SEKINI 393
A P + +A ++SA R M E N+ +VR V G + +G + P + E I
Sbjct: 351 AAPKDKQAEQSLSAFIRGMIETNQAMLVRYVKTMGS-APYLGYMIPKIKSYNDDDENDGI 409
Query: 394 PDSF----YFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPS 445
+ F YFN LP A+D+R++QFPS S K P+ S+ PN++Q +A L+ +DL
Sbjct: 410 EEKFIECLYFNHLPLADDIRQYQFPSLSLKNPLTRKSFIPNKEQLDATQQLIDSMDLMGG 469
Query: 446 GKG-------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
G ++L+P T NP L+ FY L +S H ++ P LD + + PD +L
Sbjct: 470 GGDGDEEESIQMLKPSFTYNPLLQHFYQCLHHRSLHPNSLIPKLDPIISQYINPDEQILE 529
Query: 499 ESQSAIDAFCGQFVIKENPKLKK--------------STRRFLREKPSGSDEPNGDGSVS 544
+S+++I F +F + ++ K S + + ++ +E N D V+
Sbjct: 530 KSKNSIKEFYLKFPLTKSINFNKLNNNNNQQQQQQQQSLKYYWKDGVLIGEEINLDSYVT 589
Query: 545 D------AQAVN-----SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 593
D + +N S+ V+++G + P+Q+F+ M++RRD D VDKAI MK
Sbjct: 590 DDGSEFKKRKINDFSEFSLNKLISGYVNEVGTINPVQNFKDMLNRRDV-DLVDKAITLMK 648
Query: 594 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+I L+ +S + Y KA E + LR GCI E S + F+
Sbjct: 649 ERIIQLVNDSLKEQYYQKAFECIKELRNGCIRESEADSFNSFI 691
>gi|66808247|ref|XP_637846.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
gi|74853480|sp|Q54LY5.1|XRCC5_DICDI RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit ku80
gi|60466265|gb|EAL64327.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
Length = 796
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 194/705 (27%), Positives = 338/705 (47%), Gaps = 91/705 (12%)
Query: 5 REALLLLLDVSPSMHS-----------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+EA++++LD+ M S + D + + L Q+KLIYGK ++G++L GT+
Sbjct: 8 KEAVVVILDIGLGMTSKDSDGTTTTTSSIEDALRSVTLLYQQKLIYGKKDQLGLVLIGTK 67
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY 113
T+N L + GY+H+ V+ DI+ ++ L++L G GD +D+++V +DMLI+K
Sbjct: 68 GTKNNLQDD--GYQHITVVSDIEEPSIETLKYLENLAPGESKGDVIDSLIVAMDMLIRK- 124
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL---SG 170
E K +K + L+T+A P+ D+ DQ I ++ G+ + ++ +
Sbjct: 125 TENKKYQKRIFLVTNARDPINTEDLSIVRDQFKKIDVKLNIIGVDFLEEIEENNMDTSNN 184
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK 230
+ + +N+ L F++ + V + +++ + T FRG LE++ ++K
Sbjct: 185 NKNKSLKEKNEIFLREFAESVDGVLVPVKQALEMMSFFRSQSVMTRTSFRGALEITPELK 244
Query: 231 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--------------------------THE 264
I VW Y K ++ P+LKK S A + T +
Sbjct: 245 IPVWGYLKMKQQLLPSLKKISSIAQQQIEQQQQQQQQQNKNKNNEDNEDNEEGKPNITLD 304
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V + Y S+ DP + +KGY+YG ++P S + + +K+ K +K++GFTD
Sbjct: 305 VNQEVSYYSITDPDNEILKPDLLKGYKYGKSLIPFSKIDEDQLKYSSSKCLKVVGFTDRK 364
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
+I +Y M + +F+++PG+ ++ A+S+ A+ E ++V +VR V + S +G +
Sbjct: 365 SIPIYYNMGNTEVFVSQPGDKQSEEALSSFIHALVETDQVMVVRYV-KTMNGSPYLGYMI 423
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFPVSWQ---PNEQQQEAADNLVKML 440
P+V Y+N LP A+D+R++QFP S K P++ + PN +Q EA L+ +
Sbjct: 424 PHVKSDYV---CLYYNHLPLADDIRQYQFPPISPKNPLTRKSNIPNAEQLEATQQLIDSM 480
Query: 441 DLAPSGKGE------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
DL S E +L+P T NP L+ FY L +S H + P LD + + PD
Sbjct: 481 DLMKSEFDEDGDPIQMLKPRFTYNPLLQHFYQCLHHRSLHPNTQIPKLDPIIAEYINPDQ 540
Query: 495 TLLAESQSAIDAFCGQF------VIKENPKLKKSTRR----------------------F 526
++ +S+ +I F +F V + P +
Sbjct: 541 IIMNKSKQSIKNFADKFPLTKTTVFSKTPAISGGNTNGTTSNTNNTMIGGVKYHWKDGML 600
Query: 527 LREKPSGSDEPNGDGSVSDAQAVN-----SMESKPVVTVDKIGDLTPIQDFEAMMSRRDC 581
+ E+ + DGS + + VN S++ V ++G + P+Q+F+ M++RRD
Sbjct: 601 IGEEINLDSYVTDDGSEAKKRKVNDFSEFSLDKLVSGYVTEVGTINPVQNFKDMLNRRDM 660
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
D VDKAI MK +I L+ +S Y KA E + LR GCI E
Sbjct: 661 -DLVDKAITLMKERILQLVNDSLRDQYYQKAFECIKELRVGCIRE 704
>gi|403353375|gb|EJY76224.1| ATP-dependent DNA helicase [Oxytricha trifallax]
Length = 776
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 212/727 (29%), Positives = 347/727 (47%), Gaps = 120/727 (16%)
Query: 4 TREALLLLLDVSPSMHSVL-PDVEKLCSR----------LIQKKLIYGKNHEVGVILFGT 52
+EA++++LDV +M+ L D E +R L ++KL+Y HE+G++L T
Sbjct: 2 NKEAIVVILDVGSTMNKNLGNDDENGETRFQTALESVKMLFEQKLLYAAGHEIGIVLINT 61
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQGTC--------AGDFLDAIV 103
+E+ N L Y+HV +DI +D ++S + L Q C GD LD ++
Sbjct: 62 KESSNALNDAYSDQYKHVTTYRDIYKLD---LESFRQLEQIQCEKAPIKDNGGDLLDGLI 118
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK--- 160
VG+DML++ GE K KK + LITD G +E Q Q V + +
Sbjct: 119 VGMDMLVRHCGER-KVKKRVFLITD----------GERETQYDQKELQQVIQTINERDAR 167
Query: 161 -NIVV----------------------RASLSGEPH-MRVIIENDNLLNIFSKKSSAKTL 196
N++ + L +P+ + +N L+ ++K
Sbjct: 168 LNVITLDFCDDLAEDEDEDEEDEDQSKKKQLKMQPNETKAQFKNKKFLSELTEKVKGAIF 227
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ K R++ T +RG+L++S+ K+ V +Y +T EE FPTLKK+S A
Sbjct: 228 PAKVAIEIYQQFKKREVMARTKYRGNLDISKNCKLNVQIYSRTREEVFPTLKKHSLVADD 287
Query: 257 TDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---- 311
+ VKV+ + ++DP ++ VPP+Q+IK + YG Q+VP++ +K+KP
Sbjct: 288 SKNAKEGLVKVERQLAEIDDPDQIAVPPDQQIKAFNYGKQLVPVAKENEHVLKYKPTKEG 347
Query: 312 ----------------------EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
EK KLLGFTD S + RH+++ V++ + G S+
Sbjct: 348 EEETPSNEYVDDKDIKLQSSDYEKEFKLLGFTDQSKVPRHHFIAGVDVVLPVRG-SKNER 406
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A +AL AM E ++V I R + R+ +V VL P++S+K + Y LP E++R
Sbjct: 407 AFAALVYAMIETHRVLIARIIERKNADPKLV-VLYPHISKKKPL---LYMAQLPTNEEIR 462
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA-----PSGKGEILQPELTPNPALERF 464
++QFPS P S Q++AA L+K LDL P + E L+P+LT NPAL+ F
Sbjct: 463 DYQFPSL--VPASR----DQKQAAKELIKALDLTKDVNEPEVEEEKLKPDLTFNPALQYF 516
Query: 465 YHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST 523
+ + H ++ P L+ ++ + +PD L +Q + AF F ++ N + +
Sbjct: 517 SQVVVHRITHPEEQELPELNQAIAEYVKPDKELFTHAQEEVSAFEEAFKLEHNNEDENKK 576
Query: 524 RRFL-------REKPSGSDEPNG---DGSVSDA---QAVNSMESKPV-VTVDKIGDLTPI 569
R+ + RE+ ++E + S++ Q + E K V +IG + PI
Sbjct: 577 RKRIYWRDIIQREEIKAAEEQKQMEEEASIARMKLDQKGDGFEFKDNDGAVKEIGSVNPI 636
Query: 570 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVY 629
+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+E L +LR+ CI E
Sbjct: 637 EDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAIECLASLREACITEDEA 695
Query: 630 LSVSFFL 636
+ F+
Sbjct: 696 QKFNLFM 702
>gi|440800306|gb|ELR21345.1| ATPdependent DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 753
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 203/686 (29%), Positives = 338/686 (49%), Gaps = 97/686 (14%)
Query: 2 ARTREALLLLLDVSPSMH-------------------------------SVLPDVEKLCS 30
A +REA++++LDV SM S L K
Sbjct: 3 AASREAVVVILDVGASMATQQRCSSSSSRPTMGASSSSAAAACASVSTTSGLEQAVKAVE 62
Query: 31 RLIQKKLIYGKNHEVGVILFGTE------------ETENELTKEVGGYEHVKVLQDIKVV 78
L+Q+KL++ E+G++LFGT ET N+L+++ GY+H+ V ++I
Sbjct: 63 LLVQQKLMHPSRDELGLVLFGTRGTCLLLIAIVITETHNQLSED--GYQHITVAREIMGA 120
Query: 79 DGHLVQSLKHL-PQGTCAGDFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDP 136
D L++ + + P+G D +DA++VG+D+LI+K G+ Y+ K + L+TDA CP+
Sbjct: 121 DIDLLRYISTITPEG---ADVIDALIVGMDLLIRKTAGKRYE--KRIFLVTDAGCPVNQD 175
Query: 137 DVGTKEDQVSTI-AR-QMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
D+ +Q I AR ++ G + S +N+ L+ F+++
Sbjct: 176 DLDVVCEQFLKIDARLNVIGVGFEEDDDQRAGSQDDNDKAEFKRKNERLIREFAERVHGV 235
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
+ V + K + + T RG LE+S +KI VW Y KT E K PTLKK S
Sbjct: 236 VVPVQRAIEMMSFIKPKPVLQRTSHRGCLEISAHVKIPVWSYIKTMERKLPTLKKVS--- 292
Query: 255 PSTDKFATHEVKV----DYEYKSVEDPSKVVP---PEQRIKGYRYGPQVVPISSAEWEAV 307
++ V + E + + P P P++++KGY+YG +VP S + +
Sbjct: 293 ------VVSQLSVWGEEEEEGRQLNAPPSRYPSVAPDEKVKGYKYGKTLVPFSMVDEAVL 346
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ K ++L+GFT A N+ RH ++ +V + EPG+ A A+SALA A+ E +AIV
Sbjct: 347 KYEAAKCLQLIGFTSAKNVPRHQFLGNVECIVPEPGDGSAAAALSALAHALAETGSLAIV 406
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ 424
R V R + + +G L+P++ PD YF LPFAED+R++ F S ++ ++
Sbjct: 407 RYVKRN-KGNPYLGCLSPHIK-----PDFACLYFCALPFAEDLRQYPFASLARPLRKAYA 460
Query: 425 PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLELKSEHQDA- 477
P+E+Q EA L+ +DL + E ++P+ T NPAL+ Y + + +H D
Sbjct: 461 PSEEQLEATQALIDSMDLMTAATDEDGNPMEAVKPKYTYNPALQNLYRAVLHRLQHPDEP 520
Query: 478 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI-KENPKLKKSTRRFLREKPSGSD- 535
+ PP+D ++++ PD L + + A+D + F + K RR+ R++ + +D
Sbjct: 521 SLPPVDPAIQEALRPDLGLADKLRPALDRYKAAFTFTRVEGAAAKVERRYWRDRLADTDV 580
Query: 536 -------EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
E + + + SMES +G + P QDF M++RRD D VDKA
Sbjct: 581 QLESYVPEAKKQRKNPEEEGI-SMESLMSGATSDVGPINPEQDFSDMLARRDV-DLVDKA 638
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVE 614
+E M+ +I L+E+S Y KA++
Sbjct: 639 VEQMQGRIKQLVEDSVGTQLYDKALQ 664
>gi|290979382|ref|XP_002672413.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
gi|284085989|gb|EFC39669.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
Length = 773
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 198/701 (28%), Positives = 333/701 (47%), Gaps = 103/701 (14%)
Query: 5 REALLLLLDVSPSMHSVLPD----VEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
+EAL+++ DV S+ + D ++ + LI+ K+ Y EVG +L GT++T+N L
Sbjct: 12 KEALVIIFDVGKSLGTRSRDEFEKAKRAITLLIKMKMRYSPKDEVGFVLVGTKKTKNHLN 71
Query: 61 KEVGG-YEHVKVLQDI--------KVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIK 111
E G YE++ + Q I K+VD + ++ P+G D DA++V DM+
Sbjct: 72 DEYEGEYENIYIEQAIDTVSLDLFKIVDSINIDTIGMSPEG----DLFDAVIVATDMIKD 127
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 171
+ G+ K K + +++DA G E V R+ + G+R +++ V
Sbjct: 128 RCGKR-KYAKRIVIVSDA---------GGTEISVDNDTRENIYQGMRNQDVKVNVIGLDF 177
Query: 172 PHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGAR-------------KTRDISPV 216
+ V +E+DN I K K + D ++ G K++ +
Sbjct: 178 VNTEVKLEDDNG-KIVGKTPKLRNEIFLCDMCKNVGGIVIPIQQAIDTLLLFKSKKVLSR 236
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T FRG+L+++ +KI VWVYKKT + PT K+ S + + +V+++ Y S +D
Sbjct: 237 TTFRGNLDIAGNIKIPVWVYKKTEKTSLPTAKRLSLVSRRANTGGDGDVQMERCYYSYDD 296
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
P + ++ +K Y+YG VP + +A+K+K K + +LGFTD NI R ++M +
Sbjct: 297 PDNQIEKDKTVKAYKYGKNFVPFNIVNEKALKYKSSKGITVLGFTDEKNIDRSHFMAETY 356
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
FIA+P + A +A+S+ RA+ E+ V I+ V+R + +G L P++ +
Sbjct: 357 SFIAKPDDPFAQIALSSFIRALSELEMVMIITYVYRDDLEP-KLGFLYPHIGTN---SEC 412
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG------KGEI 450
YFN LPFAED+RE+ F SFS + + +E+Q +AA++L+K +DL + K E
Sbjct: 413 LYFNALPFAEDIREYPFKSFS----TVKHSEEQLQAAEDLIKSMDLMDADEDENGEKSEA 468
Query: 451 LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT-------LLAESQSA 503
++P NP ++ FY L +++ + PP++ + K P+ L+ +++
Sbjct: 469 MKPTCIYNPLVQHFYDCLHVRALKPNDPLPPVEPLITKFCYPEMNPESFYYKLMEKTKEH 528
Query: 504 IDAFCGQFVIKE---NPKLKKSTRRF-LREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT 559
F F KE + KL K F + E D N + + Q +ES V
Sbjct: 529 RLKFKSLFPTKEVEADSKLGKRKYWFAMGENEITLDSYNLEEVAENVQGTALLESDHVGQ 588
Query: 560 V---------DKIGD-------------------------LTPIQDFEAMMSRRDCPDWV 585
V D + D P +DF M++R+D D V
Sbjct: 589 VVKRLKDGAYDGMSDAQFNEVQQRVGLNNLFMEQANSVKTTNPTKDFSEMLNRKDV-DMV 647
Query: 586 DKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
DKAI++M+ IF L+ +S E Y K + + LR+GCI E
Sbjct: 648 DKAIQEMQVVIFKLVNDSIEDQYYEKVLACIKTLREGCIRE 688
>gi|170181041|gb|ACB11497.1| KU80-like protein [Pinus sylvestris]
Length = 224
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 163/224 (72%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK 120
KEVGGYE+V V + IKVVD ++++L LP+G GDFLDAIVVG+D+LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 121 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 180
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 181 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 224
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLE
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLE 224
>gi|348676446|gb|EGZ16264.1| hypothetical protein PHYSODRAFT_316299 [Phytophthora sojae]
Length = 770
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 199/712 (27%), Positives = 325/712 (45%), Gaps = 95/712 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVL-------------PDVEKLCSR----------LIQKKL 37
M+R +EA+++LLDV SM L P E +R ++Q+KL
Sbjct: 1 MSRAKEAVVVLLDVGASMRVPLRERVAASDKNRQDPGDELQHTRFAASIAAVEGVVQQKL 60
Query: 38 IYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
+ EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 FFKPKDEVGIVAYGSEDTDNQLNEEQGESEYRNVQVVNSIDSPTLHMIKRLRELKPSRSE 120
Query: 96 G---DFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
D LD ++V +D+L ++ G+ Y K L +ITDA + D G E V+ I
Sbjct: 121 DTKVDILDGLIVALDLLFRRTDGKKYD--KRLMVITDAAAKI--ADAGDLESVVTMIQNM 176
Query: 152 MV---AFGLRMKNIVVR-------------ASLSGEPHM-------RVIIENDNLLNIFS 188
V GL ++ ++ A++ EP R+ EN+ +L +
Sbjct: 177 EVKLQVIGLDFQHTTIKPQKDKEGDEEMPEANVKDEPDAGGAPGPERIKAENEKMLVSIA 236
Query: 189 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 248
+ + V L + ++ T FRG LE + + I V+ Y KT PTL
Sbjct: 237 NEVGGEVCSVSKRMHLLAQGMKKTVALTTKFRGPLEFGDALGIPVYCYLKTKTATLPTLS 296
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
K S S +K A +VK+D Y S ++ + VPP+Q++K YRYG + VP +SA+ E K
Sbjct: 297 KESQS--SYEKEAAGKVKLDRRYTSPQNIDEEVPPDQQVKAYRYGAEKVPFASADVEFFK 354
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
F+ EKS+K+LGF D + I ++ ++F+AEPG A +AL AM E+++V + R
Sbjct: 355 FQTEKSLKVLGFLDKAQINHAKFVAGTDIFVAEPGKPHAATCFAALIDAMVELDQVIVAR 414
Query: 369 CVWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 426
V R+ +V ++ P+ + N + + LP+ EDVR ++F + P
Sbjct: 415 FVARKNAAPKIVALIPHAPSSGQGENYY-AMWSQQLPYEEDVRNYEFAPLKS--RKYTPT 471
Query: 427 EQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
+ QQ AD LV L + E+ NP + RF+H + +++ + A P L +
Sbjct: 472 DGQQALADKLVDSLSIRDDKADEV---GACFNPVIRRFFHAVSMRALDESAGVPALPSYM 528
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKE--NPKLKKSTRRFLREKPSGS---------- 534
+ + DP + S I+ F F +KE + + F + P+ S
Sbjct: 529 EASLKMDPARQEKISSLIENFGDAFQLKEAVKKAKDRKKKSFWSDVPAASVKEEDLKEEH 588
Query: 535 -DEPNGD--GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMM-------SRRDCPDW 584
D GD GS + ++S V +V G + PI DFE ++ SRR
Sbjct: 589 DDAAGGDNAGSDLELDLDELLDSGDVTSV---GSMNPIADFEELVESSKSKASRR---QQ 642
Query: 585 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+ A+ M+ +I L S YPKA++ L RK + Q + FL
Sbjct: 643 LTTAVTGMETQIEKFLSQSGSEF-YPKALQCLTHFRKRSVEIQYSSQFNEFL 693
>gi|301096669|ref|XP_002897431.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107122|gb|EEY65174.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 767
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 319/694 (45%), Gaps = 92/694 (13%)
Query: 1 MARTR------EALLLLLDVSPSM-----------------------HSVLPDVEKLCSR 31
M+RT+ EA+L+LLDV SM H+
Sbjct: 1 MSRTKVCVLVPEAVLVLLDVGASMRAPLRERVSVSDKNRQDTDNDLQHTRFAAALAAVEN 60
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL 89
++Q+KL + EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 VVQQKLFFKPKDEVGIVAYGSEDTDNQLNEEQGQGEYRNVQVVNSIDSPTLHMIKRLREL 120
Query: 90 PQGTCAG---DFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPLKDP-DVGTKEDQ 144
D LD I+V +D+L ++ G+ Y K L +ITDA + D D+ +
Sbjct: 121 KPSKSEETKVDILDGIIVALDLLFRRTDGKKYD--KRLLIITDAAAKIADAGDLESVVTM 178
Query: 145 VSTIARQMVAFGLRMKNI--------VVRASLSGEPHM-------RVIIENDNLLNIFSK 189
+ + Q+ GL ++ + S+ EP RV EN+ +L +
Sbjct: 179 MQNMEVQLQVIGLDFQHTTTAKKADEMAETSVKDEPMELATSGPDRVKAENEKMLVSIAN 238
Query: 190 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 249
+ + V L + ++ T FRG LE + + I ++ Y KT PTL K
Sbjct: 239 EVGGEVSSVSKRMQLLAQGMKKTVALTTKFRGPLEFGDTLAIPLYCYLKTKTATLPTLSK 298
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S S +K +VK+D Y S ++ + VPP++++K YRYG + VP +SA+ E KF
Sbjct: 299 ESQN--SYEKETAGKVKLDRRYTSPQNVDQEVPPDEQVKAYRYGSEKVPFASADIEFFKF 356
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ EKS+K LGF D S + ++ ++FIAEPG A +AL AM E+++V I R
Sbjct: 357 QTEKSLKALGFLDRSQLNHSKFIAGTDVFIAEPGKPHAATCFAALIDAMVELDQVIIARF 416
Query: 370 VWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
V R+ +V ++ P+ E + + LP+ EDVR ++F + P+
Sbjct: 417 VPRKNAAPKIVALIPHAPSSGENFY---AMWAQQLPYEEDVRNYEFAPLKT--RKYTPSS 471
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 487
+QQ AD LV L + E+ NP + RF+H + +++ + A P L L+
Sbjct: 472 EQQALADKLVDSLSIRDDKADEV---GACFNPVIRRFFHAVSMRALDESAGVPALPSYLE 528
Query: 488 KITEPDPTLLAESQSAIDAFCGQFVIKE--NPKLKKSTRRFLREKPSGS----------D 535
+ D + S I++F F +KE + + F + P+ S +
Sbjct: 529 SSLKMDSGRQEKISSLIESFGDAFQLKEAVKKAKDRKKKSFWSDVPTASIKEEDLKEENE 588
Query: 536 EPNGD-GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM-------MSRRDCPDWVDK 587
E GD GS + + ++S V +V G + PI DFEA+ +SRR +
Sbjct: 589 EATGDAGSDLELDLDDLLDSGDVTSV---GSMNPIADFEALIESSQSKLSRR---QQLTT 642
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
A+ M+ +I LL S +PKA++ L RK
Sbjct: 643 AVTGMETQIEKLLSQSGSEF-FPKAMQCLSHFRK 675
>gi|443717141|gb|ELU08335.1| hypothetical protein CAPTEDRAFT_163248 [Capitella teleta]
Length = 723
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 174/660 (26%), Positives = 311/660 (47%), Gaps = 65/660 (9%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDV-----EKLCS--RLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV P M+ P E + + ++Q+KL EV +IL GT
Sbjct: 1 MAANKEAIAIVLDVGPGMNQAPPGCTTPIEESITAIQMILQRKLFSESKDEVALILLGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIK- 111
T NEL + G Y ++ + + I VD L+Q +++ + + + DF+ A+VV +D ++K
Sbjct: 61 NTANELADDDGNYANITLAKPIGPVDWQLLQYVQNDIHPSSFSADFISAVVVAMDHIVKG 120
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF---GLRMKNIVVRASL 168
G+ K + L ++ D + ++ V ++ Q + F G M +
Sbjct: 121 TSGKKGFASKRIILFSNLCGEFGDDHL---DNIVGSLKGQDIEFDVIGPEMDDDDDDDGD 177
Query: 169 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-----SLRGA---------RKTRDIS 214
+ P +N + + A F+ T S R A R+ R
Sbjct: 178 NPRPGTSG--QNQKPKSTQQRAGEALVKFIQETVEGCSYSFREALAALSNYLSRQVRS-- 233
Query: 215 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--DKFATHEVKVDYEYK 272
T +R ++E+ ++KI + ++ + E K + K + P+ ++ H + D E
Sbjct: 234 --TAWRCNMEIGSELKIPINLFTRIKEAKAKSFKNVYARDPNAALERNRAHHLN-DAEET 290
Query: 273 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 332
+E E + G+RYG +VP S+ + EA+K++ EK K+ GFT + N+ HY M
Sbjct: 291 EIE-------REDTVDGHRYGSTLVPFSADDKEAMKYRSEKCFKVFGFTKSENVRTHYKM 343
Query: 333 KDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
D + +AE + A VA+SA A+ E N VAIVR V+ +V +G L P + +
Sbjct: 344 GDATWVCVAEKSDEAAAVALSAFINALYETNCVAIVRRVY-NNNGAVRIGALVPQIEAE- 401
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA--------ADNLVKMLDLA 443
+ +N LPFAEDVR + SF PVS + Q++A D L+ +DL+
Sbjct: 402 --NECLIYNELPFAEDVRNY---SFGSLPVSETNSANQRQAPTDDQLSLMDELIDNMDLS 456
Query: 444 ---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 500
++L PE+T NP L+R + L+ ++ + D P L + +++ EP + +
Sbjct: 457 KVETDDDCQVLDPEVTFNPYLQRLFQCLQHRALNPDDPLPDLSEVVRRSLEPPVCVATQC 516
Query: 501 QSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTV 560
+S ++ ++ ++ K KK T + K +EP S+ +E V
Sbjct: 517 ESTVEKMKEKYSLQRVEKKKKETAENIFGKKDEDEEPACKKMKSEDDLNGGLEDIVKAKV 576
Query: 561 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
+++G + P++DF+A+++ +D D ++A MK ++ L+ +S YPKA+ + R
Sbjct: 577 EEVGTVNPVEDFKALLAWKD-KDMFEEACAMMKARVLQLVSDSFGTQLYPKAMNCIQTFR 635
>gi|281203244|gb|EFA77444.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 699
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 184/670 (27%), Positives = 306/670 (45%), Gaps = 89/670 (13%)
Query: 4 TREALLLLLDVSPSMH---------SVLPDVEKLCSR--LIQKKLIYGKNHEVGVILFGT 52
T+EAL+++LD+ MH + P E L S L Q+KL+YGK E+GV+L GT
Sbjct: 8 TKEALVVILDIGLGMHQHSNTNKQYTTTPIEEALKSATLLYQQKLLYGKKDELGVVLIGT 67
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKK 112
+ET+N L K+ GY H+ +I+ ++ L+ L G GD +DA++V +DMLI K
Sbjct: 68 KETKNNLQKD--GYHHITTQTEIEEPTLETLKFLEQLKPGQSRGDIIDALIVAMDMLIHK 125
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
+ K +K + L+T+ P+ D+ T DQ I ++ G+ + L +
Sbjct: 126 TAKK-KYQKRIFLVTNCYDPINKDDLSTLRDQFKKIDVKLNIIGV---DFTDEEELENKI 181
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
+ EN+ L F++ + V + +++ + T+FR
Sbjct: 182 KLTKKEENEKFLREFAESVDGVLVPVKQALEMMSFFRSQSVLQRTVFRD---------TG 232
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
V VY+ E ++D D AT + + R +
Sbjct: 233 VVVYEDKDSE-------FTDAWKGVDSGATAKGRA-----------------TRCQNNNR 268
Query: 293 GPQVVPISSAEWEAVKF--KPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATV 349
G EA+ F + V L T+ + Y+ K + ++ PG+ A
Sbjct: 269 G--------QTGEALLFDKRSRYRVGLFRVTERIQKVPIYHNKGSTEMMVSPPGDKVARS 320
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S+L M E + + R V R G S + +L P++ K N +S Y LPF +D++
Sbjct: 321 ALSSLIHGMAETKQALLARYVKRNGS-SPSIALLYPHI--KANY-ESLYVCQLPFLDDLK 376
Query: 410 EFQFPSFS-KFPVS---WQPNEQQQEAADNLVKMLDLAPSGKGE------ILQPELTPNP 459
++QFP + P + + P +Q +AA L+ +DL + + E L+P T NP
Sbjct: 377 QYQFPPIAPTNPATRKPYIPTAEQVDAARALIDSMDLMTAEEDEDHQKIAALRPRFTYNP 436
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI------ 513
+L+ FY L ++ H ++ P LD + K PD ++ +Q AI F F +
Sbjct: 437 SLQHFYQCLHHRALHPESQLPKLDPIISKYINPDEAIMENAQDAIKNFQILFPLTKTTNF 496
Query: 514 KENPKLK------KSTRRFLREKPSGSDEPNGDGSV-SDAQAVNSMESKPVVTVDKIGDL 566
K PK + ++ +R +D+ N +D A S++ V+++G +
Sbjct: 497 KSEPKYRWQDGMLVEQQQEIRLDSYVTDDTNSSKKRKADDLADYSLDKLVSGYVNEVGSI 556
Query: 567 TPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
P+Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +VALR+G I E
Sbjct: 557 NPVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVALRRGSIKE 615
Query: 627 QVYLSVSFFL 636
L + FL
Sbjct: 616 SESLVFNQFL 625
>gi|196014368|ref|XP_002117043.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
gi|190580265|gb|EDV20349.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
Length = 784
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 188/696 (27%), Positives = 311/696 (44%), Gaps = 136/696 (19%)
Query: 5 REALLLLLDVSPSM------HSVLPDVEKLCSRLIQKKLIYGKNH-----EVGVILFGTE 53
+EA+ + LDVSPSM H+ + +I + ++ + H E ++LFGT+
Sbjct: 26 QEAIAICLDVSPSMCYAPQGHASKLETSVNAINMIVSRKMFSQGHLANKDEFALVLFGTQ 85
Query: 54 ---------------------------ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL 86
E++N+L ++ G YE++ V++ + D + ++ +
Sbjct: 86 ARKRIDNYTACSTKNALSVIDIFVYCLESDNDLYED-GQYENISVVRPLGPPDLNFLRYI 144
Query: 87 KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVS 146
+ T LD+I+V +D+L K G K + L +D P D DQ+
Sbjct: 145 Q-----TNIAPVLDSIIVAMDLLKKSTSGKKFGDKRIILFSDLGSPFAD-------DQI- 191
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-SLR 205
+GE ++ I+E VD + SLR
Sbjct: 192 ----------------------AGESTLKKILE-----------------IVDGDSHSLR 212
Query: 206 GARKT------RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
A T R I T+FRG LE+ K+KI + Y K E K + KK S + ++++
Sbjct: 213 SALSTLSFFQKRSIKMTTVFRGPLEIGSKLKINTYAYIKVRESKPESWKKLSAISEASNQ 272
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+VK++ Y ++ + E KGY+YG +VP + E++K K K + +LG
Sbjct: 273 PGDMKVKIERSYHLNDEDETEIERENLAKGYKYGKTIVPWLKIDEESMKLKAAKCLSVLG 332
Query: 320 FTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
FT + N+ RH+ M D V +F+ P + A VA SAL +A+ E +KVA+VR V+R Q
Sbjct: 333 FTKSENVKRHWLMGDGVVVFMPAPNDEPAGVAFSALVQALYETDKVAVVRYVYRNNSQP- 391
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
+G+L P + S F LPF ED+R++ F S + + P + Q + D+LV
Sbjct: 392 KLGILFPQIKATYR---SLLFIQLPFMEDIRQYTFASLTTNKKN-VPTDDQLDLVDDLVT 447
Query: 439 MLDLAPSGKG------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+DL+ + + E L+P+LT NP L+R Y ++ ++ + D A P D + + P
Sbjct: 448 SMDLSRAYRDDDGELIEALKPKLTFNPVLQRSYQCIQHRALNPDDALPRPDPVITRYLSP 507
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLK-----------KSTRRFLREKPSGSDEPNGDG 541
+ A S F I K K K E + S
Sbjct: 508 SQDVTATCASHFQKIKDSFGIVHVQKKKKRDDGTAASIFKDNIDLALELDTSSKRAKDSN 567
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRD----------CPDWV---DKA 588
S +D S SK VT ++G + P+QDF+AM++++D P+W A
Sbjct: 568 STADVDFSISSLSKENVT--EVGTVQPVQDFKAMINQKDEDRFEEGTDYRPNWYPMNTLA 625
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ MK++I+ L+ +S +PKA++ L ALR+ C+
Sbjct: 626 CKQMKSRIWQLVMDSIGSQLFPKAMDCLKALREECV 661
>gi|260786747|ref|XP_002588418.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
gi|229273580|gb|EEN44429.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
Length = 716
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 317/664 (47%), Gaps = 82/664 (12%)
Query: 7 ALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L++DV P M P + + S L+Q+K+ EV +IL GT+ET NEL
Sbjct: 1 AMVLVVDVGPLMAQAPPGHVTPLENAKDAISMLLQRKMFSQSKDEVALILLGTQETANEL 60
Query: 60 T-KEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK-YGET 116
+ Y ++ V + + D L++ +K+ + G + DF+DAIVV +D++ + G+
Sbjct: 61 AGTDDESYLNITVARPLGQPDFDLLEFVKNDIVPGPVSADFVDAIVVALDLVRNQTMGKK 120
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL-------- 168
++ K+ + L ++ D + + + + + GL + + +
Sbjct: 121 FETKR-IVLFSNLAGEFTDDQLEGVINGMKALECEFNLIGLSLDDDDEDGDMPDQNGAGP 179
Query: 169 ----------SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+G +R +IE + + +S++S+ + L ++R A P +
Sbjct: 180 PRKERTPQQRAGTALIRHVIEEVDGV-AYSERSALQMLSFFQKRNVRAA-------PWKV 231
Query: 219 FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF-ATHEVKVDYEYKSVEDP 277
LE+ +KI V + + E K + KK + S D THE +++ + ++
Sbjct: 232 M---LEVGTNLKIPVRGFIRVKECKPNSFKKVHARTLSKDDIHTTHEHRLNDDEET---- 284
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKD-V 335
P E I GYRYG +VP S+ + +KFK + K +LGFT A N+ R YYM D V
Sbjct: 285 ----PVESTIDGYRYGNTIVPFSTDDESQMKFKTDAKCFDVLGFTRADNVKRQYYMGDSV 340
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
F+AE G+ A VA+SA A+ E N VAIVR V+ + + V LTP++ +
Sbjct: 341 RCFVAEEGDEPAAVALSAFIHALYETNMVAIVRYVYNK-NSAPKVAFLTPHIKPNY---E 396
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE------ 449
+LPF ED+R++ F S + QP++ Q A D+L+ ++L K E
Sbjct: 397 CLLCIMLPFMEDMRKYTFSSLHPNNKN-QPSDDQLSAVDDLIDNMNLVMPDKDEDGKQQQ 455
Query: 450 ILQPELTPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC 508
L+P+LT NP L+R Y L ++ + D PP + ++ +P LL ++Q +D
Sbjct: 456 YLKPKLTFNPHLQRLYQCLSARALNPDDPQLPPPNQTILNYLQPQQDLLTQAQPCVDKIK 515
Query: 509 GQFVIKENPKLKKSTR-----------RFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
F ++ K K+ T +KP + GDG ++ A + PV
Sbjct: 516 AAFPLEVVTKKKEETTAQNIFGGGDDAEPAAKKPRLDTDAGGDGGLTMA----GLAQGPV 571
Query: 558 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 617
++G + P++DF AM+SR+D +++ + + ++ +I ++ S Y KA+E L+
Sbjct: 572 T---EVGSVRPLEDFRAMISRKDDDKFMEASAQ-LQKRIEEIVMESFGDQFYGKAMECLL 627
Query: 618 ALRK 621
ALRK
Sbjct: 628 ALRK 631
>gi|340374936|ref|XP_003385993.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 878
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 179/683 (26%), Positives = 309/683 (45%), Gaps = 92/683 (13%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++ ++LL+DV P M H+ L K+ +++ +K+ G EVGV+LF
Sbjct: 6 KDFIILLIDVGPEMGDVPLSVGGAGGDDHTHLESALKIAQQIVFQKIFSGSKDEVGVVLF 65
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDML 109
GT +T+N L+ + GGY+++ + D+ L + LK + G DF+DAIVV +D+L
Sbjct: 66 GTADTDNHLSAD-GGYQNISSVWDVTTPTTELAKYLKEKVKCGPAPADFIDAIVVAIDIL 124
Query: 110 IKKYGETYK-GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI------ 162
+K K G+K + L TDA G +DQ+ I GL+ KNI
Sbjct: 125 VKVTSNKKKVGEKKIYLFTDA-------SSGCSDDQIKEIIE-----GLKSKNIDLVIIG 172
Query: 163 --------------VVRASLSGEPHMR-----------VIIENDNLLNIFSKKSSAKTLF 197
S+ G H R E + +L++ + + ++
Sbjct: 173 PTLPNSETEDDRNDDNDDSVPGPSHGRRPPAPHYKKTPAQEEGERVLSLLVSEGAGRSFS 232
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
++ T F G LE+ ++KI ++ K+ E+ T KK S + S+
Sbjct: 233 FHDAMNISSFISKNAKKQTTRFAGVLEIGPQLKIPCKIFTKSMHERPATWKKLSAISQSS 292
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
T + ++ Y ++ V IKGYRYG ++P+SS + + +K K + L
Sbjct: 293 ANPGTMAINLERSYHLQDEDETEVDLSDTIKGYRYGRSLIPVSSEDDDNMKLSASKCLSL 352
Query: 318 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGFT + + + + V + IA P + + V++SA+ RA+ EM+ I R V+R
Sbjct: 353 LGFTSRNKVRQELLVGSSVQVLIANPDSEPSAVSLSAIIRALYEMDMAGIARYVFRN-NA 411
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
S + L P++ P+ LP+ ED+R+F F S S +P+++Q A D L
Sbjct: 412 SPRLCALVPHIK-----PNYEVGGTLPYMEDLRQFSFASLSH--PKLEPSDEQLTAVDEL 464
Query: 437 VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
+ ++L + + NP +R + LE +S + D PPL+ +L++ P P L
Sbjct: 465 INNMEL-----DDDFNTKEIKNPLFQRTFQCLEHRSLNPDDPLPPLEPALERCLNPSPAL 519
Query: 497 LAESQSAIDAFCGQFVI-----KENPKL------KKSTRRFLREKPSG----SDEPNGDG 541
L++ S++ F + K K KKST L K +D P+
Sbjct: 520 LSQCSSSVLKVKKVFPLTRIDDKNKDKTAVTNVWKKSTDINLDAKDGAEGDDNDLPSSKR 579
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
S +D S+ S V+++G + P+ D++ M+ ++ D DKA + ++ IF L++
Sbjct: 580 SKTDETDF-SIASLAKGEVNEVGTVDPVGDYKKMI--QNNSDTFDKATKQLEEVIFRLIK 636
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
S + Y KA+ + +R I
Sbjct: 637 GSLGDVMYSKAMNCIRTMRAEAI 659
>gi|145493174|ref|XP_001432583.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399696|emb|CAK65186.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 184/685 (26%), Positives = 314/685 (45%), Gaps = 91/685 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKKITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDFLDAIVVGVDML 109
+ E+ G +++ L D ++L LP GD DA+ V L
Sbjct: 64 DAED------GNTFYIQTLSS---PDLEFYRNLTELPNHDIPKIIGGDIFDALDKSVSTL 114
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR---- 165
+Y +T K K + ++T + E +++ + + + +++ I +
Sbjct: 115 -DEYVKTKKMDKKIFVLTAGFGQTE-----YNEKKIAKLIKMIEKVDVKINFIALDFMNE 168
Query: 166 --ASLS--GEPHMRVIIENDNLLN---------IFSK---------KSSAKTLFVDSTTS 203
A L +P + + ND +LN I S+ +S + +
Sbjct: 169 YDAELDDPSKPENQETL-NDRMLNAVYESQEQSINSRLVYYMVQELRSHMRIFPANIAFE 227
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
L T+ + FRGD +++++ I V VYK+ EEK P+LKK+S + + +
Sbjct: 228 LYSQFHTKQMQARASFRGDFQINDETSISVLVYKRCTEEKLPSLKKHSATGEFSSEPTRN 287
Query: 264 EVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 322
V+ D + + EDP+ + E IKGY YG ++P+ S + +K++ +S +LLGF D
Sbjct: 288 VVRNDTIHYNPEDPNMTPIERENIIKGYLYGRSLIPVDSIMEDKMKYQCVRSFQLLGFVD 347
Query: 323 ASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S I RHY+M V++ +A +A ++S+L A+ K+AI R V R+ +V V
Sbjct: 348 KSQIPRHYFMSSVDMVVA-IDCEKAKKSLSSLIIALIATKKIAIARFVGREKSSPKMV-V 405
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
L P+ S+ F+ LP +ED+R FQF + K QQ A +L+ +DL
Sbjct: 406 LLPHKSKSYQ---CFWMIALPTSEDIRHFQFAALRK------STPHQQIAVASLIDKMDL 456
Query: 443 A--PSGKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
P+ G E+L+ + NP + F + K+ + PP+ + + P+ +
Sbjct: 457 EALPNESGEPEELLKMKYIANPTRQYFQQVVMHKAITRTDVIPPISPLILEYLHPEQRVY 516
Query: 498 AESQSAIDAFCGQFVIKEN----PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSME 553
+Q AI F K N P+ KK + L ++ + + + +N E
Sbjct: 517 NYAQDAIQRVKNAFKFKVNEIKKPQDKKVFWKQLFDEQTTQQQQAQQQIEEEVVEINREE 576
Query: 554 SKPVV------------TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
+ V + +IG + PI DF+ M++ + D VD A++ ++ I GL++
Sbjct: 577 EEMVNMFAKQKLGFNDDIIQEIGSVDPISDFKKMITEKRV-DLVDSALQQIQKVIIGLVD 635
Query: 602 NSNEGINYPKAVELLVALRKGCILE 626
S +G +PKA+E L +R+ CI E
Sbjct: 636 QSVKGSFFPKALECLKEMRRACISE 660
>gi|325193327|emb|CCA27667.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325193515|emb|CCA27822.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 709
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 184/630 (29%), Positives = 297/630 (47%), Gaps = 64/630 (10%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLVQSLKHL 89
++ +K+ Y N E+G++ FG++ T N L E G Y H+ + + V + SL +
Sbjct: 48 IMHQKMFYAPNDEIGMVAFGSKMTRNHLNDEHGEDQYAHIFTISHLDVPNVETCNSLSKV 107
Query: 90 PQGTCAGD------FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD-PDVGTKE 142
+ C D LD ++V +D+L ++ + K+ + L+TDA +++ D+
Sbjct: 108 SE-LCGDDKNIKVDVLDGMIVALDLLHRR-TLAMQFKRRIILLTDASSKIENTSDLEPVV 165
Query: 143 DQVST--IARQMVAFG-------LRMKNIVVRASLSGEPHMRVIIE-NDNLLNIFSKKSS 192
+ + + +A ++V F L K + + H E N+ +L +
Sbjct: 166 EMMKSLHVAIEIVVFDFVHPQEKLEKKAKEDIGCVVKQEHPTYFKEANEKMLLSLVQAVG 225
Query: 193 AKTLFVDSTTSL--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
+ + V+ L RG +K + VT FRGDLE+ I V+ + K P+L K
Sbjct: 226 GQLVSVEEEIKLLKRGMKKR--VMQVTKFRGDLEIG-SFGIPVYCFIKVKMSTLPSLMKE 282
Query: 251 SDKAPSTDKFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S+ + HE V+ D Y + P + VPP+QRIK Y YG + VP SSA+ EA KF
Sbjct: 283 SELSQEK-----HEGVRQDRRYMDPDSPDEEVPPDQRIKAYTYGHESVPFSSADLEAFKF 337
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
EKS+KLLGF DA ++ +M + N+F+++P A + L AM+ N+VAI R
Sbjct: 338 HTEKSLKLLGFVDAKSVHPANFMVNTNVFLSDPTKKNAATCFATLVNAMRMKNQVAIARF 397
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIP-DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
V R+ V+ L P++ K IP +F+ LPF ED+R+F+FPS + P+++
Sbjct: 398 VPRKNAAPKVIA-LIPHIPAK-EIPYHAFWSQQLPFEEDLRDFEFPSILQDNSKSIPSKE 455
Query: 429 QQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
QQ+ A++LV L S + + P NP L RFY + ++ DA PL +
Sbjct: 456 QQQIANSLVDGL----SVDDDEINPRTCYNPVLRRFYDSVVARAIDPDAGISPLPKC--E 509
Query: 489 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVS---- 544
E T ++ I AF F +KE +KKS + S EP V
Sbjct: 510 SMEARKTRVS---MLILAFDDAFQLKE--AMKKSVESKKQTFWSDVAEPEDVIDVHVKKE 564
Query: 545 ---DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMS-------RRDCPDWVDKAIEDMKN 594
A+A + K V +G L PI DFEA++ + D + +AI +K
Sbjct: 565 YPLKAEAFDEKIEKE--QVHYVGSLNPIADFEALVDTVKSEPPQNDQNGQIARAIAGLKA 622
Query: 595 KIFGLLENSNEGINYPKAVELLVALRKGCI 624
+I +L S+ ++ KA++ L RK +
Sbjct: 623 QIEHIL--SHGQLSCTKALQCLQHFRKRSV 650
>gi|145495442|ref|XP_001433714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400833|emb|CAK66317.1| unnamed protein product [Paramecium tetraurelia]
Length = 738
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 184/679 (27%), Positives = 314/679 (46%), Gaps = 80/679 (11%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKNITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC----AGDFLDAIVVGVDML 109
E E+ G +++V+ D ++L LP GD DA+ V L
Sbjct: 64 EAED------GNTFYIQVMSP---PDLEFYRNLTELPNHDVPKIKGGDIFDALDKAVSTL 114
Query: 110 IKKYGETYKGKKHLCLITDAL--CPLKDPDVGTKEDQVSTIARQMVAFGLR-MKNIVVRA 166
+Y + K +K + ++T + +G + + ++ + M V
Sbjct: 115 -DEYVKAKKMEKKIFVLTAGFGQTDYNEKKIGKLIKMIEKVDVKINFIAMDFMNEYDVEL 173
Query: 167 SLSGEPHMRVIIENDNLLNIF---SKKSSAKTLFVDSTTSLRGARK-------------- 209
+P + + ND +LN ++S L LR +
Sbjct: 174 DDPTKPENQATL-NDRMLNAVYQHQEQSINSRLIYQMVQELRNHMRIFPANIAFELYSQF 232
Query: 210 -TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
T+ + FRGD +++++ I+V +YK+ E++ P+LKK+S + + + V+ D
Sbjct: 233 HTKQMQARASFRGDFQINDETSIQVLIYKRCAEDRLPSLKKHSAIGEYSSEPTRNIVRND 292
Query: 269 YEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+ + EDP+ + E IKGY+YG ++P+ S E +K++ +S +LLGF + S I
Sbjct: 293 SIHYNPEDPNMNPIERENIIKGYQYGRNLIPVDSLMEEKMKYQCNRSFQLLGFVERSQIP 352
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
RHY++ +V++ IA +A ++SAL A+ KVAI R V RQ + S + +L P+
Sbjct: 353 RHYFIFNVDMVIA-IDCEKARKSLSALIIALIATKKVAIARFVGRQ-KSSPKLMLLLPHK 410
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA--PS 445
S+ F+ LP +ED+R FQF + K PN QQ A L+ ++L P+
Sbjct: 411 SKSYQ---CFWMISLPTSEDIRHFQFSTLRK----STPN--QQSAVATLIDKMNLETIPN 461
Query: 446 GKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
G E+L+ + NP + F + K+ + PP+ + P+ + +Q
Sbjct: 462 ESGEPEELLKMKYIANPTRQYFQQVVMHKAITRTDVIPPISPLILDYLHPERRVYNYAQD 521
Query: 503 AIDAFCGQFVIKEN----PKLKKSTRRFL-------REKPSGSDEPNGDGSVSDAQAVNS 551
AI F K N P+ KK + L ++ P +E + + + + VN
Sbjct: 522 AIQRVKNAFKFKVNDIKKPQDKKVFWKQLFDEQTAQQQVPEQIEEEIVEINREEEEMVNM 581
Query: 552 MESKPVV----TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGI 607
+ + +IG + PI DF+ M++ + D VD A++ ++ I L++ S +G
Sbjct: 582 FAKQKFGFNDDIIQEIGSVDPISDFKKMITEKRV-DLVDSALQQIQKVINALVDQSVKGS 640
Query: 608 NYPKAVELLVALRKGCILE 626
+PKA+E L +RK CI E
Sbjct: 641 FFPKALECLKEMRKACISE 659
>gi|255080024|ref|XP_002503592.1| predicted protein [Micromonas sp. RCC299]
gi|226518859|gb|ACO64850.1| predicted protein [Micromonas sp. RCC299]
Length = 715
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 245/546 (44%), Gaps = 85/546 (15%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MA + L++DVSPSMH L V SR++Q +++ + E +I FG++ET N++
Sbjct: 1 MATRKRCTALVVDVSPSMHPHLGPVGDHLSRVVQNRILNARIDEFALIAFGSDETNNDVH 60
Query: 61 KE-------VGGYEHVKVLQDIKVV---------DGHLVQSLKHLPQGTCAGDFLDAIVV 104
E G ++ + ++I V +V SL+ + G+ D+L+A+VV
Sbjct: 61 TEGLDAAAASGERDYEEEYRNIAVKVPMGCCSSESAEVVASLRGM-AGSAPSDYLEALVV 119
Query: 105 GVDMLIK-KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 163
DML+ + G + + + L+TD P + +D + IAR M A +++ V
Sbjct: 120 ASDMLVNHQRGGAFL--RRIMLVTDLRTPCE-----VDDDFIEDIARGMRAVDMQLTVAV 172
Query: 164 VRASLSGEPHMRVIIEND------------NLLNIFSKKS----SAKTLFVDSTTSLRGA 207
VR S + R+ E+ +LLN S K + ++ D +L+ A
Sbjct: 173 VRGEESEDETTRIQEEDTVMANRETLQRLCDLLNEPSDKGPVAVTNRSCIEDHAAALQAA 232
Query: 208 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ + P T FRGDLE + M +KVWVYKK E K P +K YSD A V
Sbjct: 233 -QVKTTKPTTTFRGDLEFTPWMSLKVWVYKKVSEAKPPAMKMYSDAA-DEAAGDDPTVGR 290
Query: 268 DYEYKSVEDPSKV--VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
+ ++S DP V PE I Y YGP +PI E + + +K +K+ GFT
Sbjct: 291 ERVFRSYADPDAPVDVAPEMMISAYPYGPANIPIQDEVKELIAARNDKGMKIFGFTSLDQ 350
Query: 326 ILRHYYMKDVNLFIAEPG-------------------NSRATVAVSALARAMKEMNKVAI 366
+ M + + + P + +AT A+SA+ARAM+ + A+
Sbjct: 351 VPHWMGMDEPRVLVPWPTKDGSLAAGMAASAGATDREHRKATEAMSAMARAMQRKGQAAL 410
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF---------- 416
VR VW Q V G LTP+++++ D F LPFAED+ F
Sbjct: 411 VRAVWTQNSDKVSFGALTPHITKEG---DFLLFVPLPFAEDMYSNDFKPLPVPGCKAAAQ 467
Query: 417 --SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEH 474
+ P ++Q+ AA LV LD G P NP+L R + + ++ +
Sbjct: 468 LGANAKAKLVPTDEQRAAAAALVDSLD------GSGPDPWDCLNPSLTRTHALIAARATN 521
Query: 475 QDAAPP 480
+ AAPP
Sbjct: 522 ELAAPP 527
>gi|145481675|ref|XP_001426860.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393937|emb|CAK59462.1| unnamed protein product [Paramecium tetraurelia]
Length = 737
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 177/683 (25%), Positives = 304/683 (44%), Gaps = 89/683 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDV-EKLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ K SRL IQ+K+ KNHEVG+ILFGTE
Sbjct: 4 KEATLILLDVGASMYGQYQQGGSKKLSRLELAVDCLGLMIQQKIFNYKNHEVGLILFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDFLDAIVVGVDML 109
E + T +QD+ + D +++ LP GD DA+ V L
Sbjct: 64 EAPDGKTL---------YIQDLSIPDLDFFRNISDLPNHDVGQQVGGDIFDALDKAVHAL 114
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
+ +T K +K + ++T A C D E Q++ + + + +++ I +
Sbjct: 115 -DDHAKTKKMEKKIFILT-AGCGQTD----YSEKQITKLIKMIEKVDVKINFIALDFMND 168
Query: 165 --------------------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
+ S + + I L + +++ + + L
Sbjct: 169 YNGDMDDPEKPEEFEALNNRMLTASYQCQEQSINSRYVFLMVQELRNNMRIFPANVAFEL 228
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP-STDKFATH 263
TR + FRGD ++++++ ++V +YK+ EE+ PTL+K+S TD H
Sbjct: 229 YSQFHTRSLQARASFRGDFQINDEISVQVLIYKRCFEERLPTLRKHSTLGEFQTDTNKNH 288
Query: 264 EVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 322
V+ D Y + EDP+ + + I+GY+YG +VP+ + +K++ + +LLGF D
Sbjct: 289 -VRNDLIYYNPEDPNMTPIEKDNIIRGYQYGRNLVPVDQIMEDKMKYQCPRQFQLLGFVD 347
Query: 323 ASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S+I R+YY V++ IA N + A++AL A+ KVA+ R V R+ ++ +
Sbjct: 348 RSHIPRYYYTSTVDMVIA-VENQKQQKALAALVIALIATRKVALARFVGREKTAPKLI-M 405
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
L P+ S+ F+ LP ED+R FQF + + S P QQ A ++ +DL
Sbjct: 406 LLPHKSKN---SQCFWMISLPTTEDIRHFQFAALKR---STPP---QQMAVSAMIDCMDL 456
Query: 443 --APSGKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
P+ G E+L+ + NP + F + K+ + PP+ + + P+ +
Sbjct: 457 EKMPTEDGQFEELLKMKYVANPTRQYFQQVVMHKAITRSDVLPPISPLILEYLHPEKRVY 516
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRR-FLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
++ A+ F K N K+ ++ F ++ V D + E +
Sbjct: 517 DYAKEALQKVKAAFKFKINEIKKQGDKKVFWKQLFEDQSTEQIQQQVEDEVVEINQEEEE 576
Query: 557 VVT-------------VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
+V V +IG + P DF M++ + D VD A++ ++ I ++ S
Sbjct: 577 MVNMFAKQKLGFNDDIVKEIGTVDPTSDFRKMITEKRV-DLVDTALQQIQKVIIQFVDQS 635
Query: 604 NEGINYPKAVELLVALRKGCILE 626
+G YPKA+E L +RK CI E
Sbjct: 636 LKGSFYPKALECLKEMRKACITE 658
>gi|298711254|emb|CBJ26499.1| ku P80 DNA helicase, putative [Ectocarpus siliculosus]
Length = 496
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 249/494 (50%), Gaps = 35/494 (7%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETE--NELTK-EVGGYEHVK---VLQDIKVVDGHLVQS 85
L+ +K++ K HEVGV+LFG E E N+L + E Y VK +L V V++
Sbjct: 15 LMVQKMLQSKQHEVGVVLFGLPEAETANQLNEAETSDYLGVKEYCLLDKGSVAVLRKVEA 74
Query: 86 LKHLPQGTCA-GDFLDAIVVGVDMLIKKYGETYKGK--KHLCLITDALCPLKDPD----- 137
+ G A GD LDA+VVG+ M+ + T K K +H+ L+TDA P+ +
Sbjct: 75 MNVPDSGEPATGDLLDAMVVGMHMIRSR---TLKKKYIRHVYLLTDAATPVAEVSQLGDI 131
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
VG D + FG + + E V +N+ +L + + +
Sbjct: 132 VGMYTDPTMECRLHFIGFG--------HGAPAEEGGGTVKEQNEKMLASVAAATRGTVVP 183
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA--P 255
+ L G + +PV + + DL L + + +KKT +LKK S + P
Sbjct: 184 AQTVVDLMGESTIKTTNPV-LSKVDLSLGTNLTLHCRFFKKTDTGLKESLKKESIASYDP 242
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-S 314
+ + +V+VD Y+ E P V E ++KG+RYG +P++S + ++K E S
Sbjct: 243 AGGSGSDGKVRVDKTYRDPEMPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPS 302
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+K+LGFT +S++ RH+YM D + ++EPG+ +A A+S+L+ AM+ +++VA+ R V R+
Sbjct: 303 LKVLGFTPSSSVERHFYMDDTFVLLSEPGSGQAAGAISSLSSAMRNLDQVAVARFVRRKS 362
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ +G+L P+ S + + F +PF EDVR F FPS +K P S P+++Q+ +
Sbjct: 363 GEP-WLGILIPD-STGVVPTERLLFQKIPFIEDVRAFNFPSLAKPPPSRTPSDEQKRVSA 420
Query: 435 NLVKMLDLAPSGKGEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+LV+ + + P G + ++ L +P + ++ + P ++ S++
Sbjct: 421 SLVEAM-MIPELDGNMQGGVRGGLVLDPVRQGINGAKVARAMDPECELPDVNPSVRAALA 479
Query: 492 PDPTLLAESQSAID 505
P+P LL ++S ++
Sbjct: 480 PEPQLLDRAKSVLE 493
>gi|405967549|gb|EKC32697.1| ATP-dependent DNA helicase 2 subunit 2 [Crassostrea gigas]
Length = 729
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 176/681 (25%), Positives = 307/681 (45%), Gaps = 94/681 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV PSM++ P E +IQ+K+ EV ++LFGT
Sbjct: 1 MAANKEAIAIVLDVGPSMNNAPPGEETPLQTAVDAIKMIIQRKMFSESKDEVSLVLFGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDFLDAIVVGVDMLIK 111
+T+N L + Y+++ + + + VVD +Q +++ P T A DF+DA+VV +D L+
Sbjct: 61 DTDNPLA-DGDSYDNITISRPLGVVDFDFLQQVQNDITPSNTSA-DFVDALVVALDHLVN 118
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL-- 168
G+ K L L++D D DQ+ I + G + I +L
Sbjct: 119 ATQGKKGFAMKRLILLSDLGGEFGD-------DQIEAIISGIKNSGTELNVIGPDINLDG 171
Query: 169 ----------------------------SGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+GE ++ I+E + FS+ A + F
Sbjct: 172 DEDDDDSQRPGPSGAANGHQKARTPQQKAGEGMLKRILEEVEGECYSFSEALPALSHF-- 229
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPST 257
+ R + P T ++ LE++ ++I V Y K + K + KK D+
Sbjct: 230 ---------QMRQVRP-TPWKVQLEITSNIRIPVCSYIKIKDFKVKSFKKVYAKDEDAEI 279
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
D T Y ++ V E ++G+RYG +VP+S + +K+K EK +K
Sbjct: 280 DNLRT--------YHKNDEEETEVEKEDIVEGHRYGTTLVPMSEDDKLNMKYKAEKCLKA 331
Query: 318 LGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGFTDA NI RH++M D + +A+ + A VA+SAL A+ E N +VR V+
Sbjct: 332 LGFTDAQNIKRHHFMGDNTHYVVADKDDETAVVALSALINALYETNMAVVVRKVY-SAAT 390
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF-----SKFPVSWQPNEQQQE 431
+ +G L P++ + + LPF ED+R++ F S ++ ++P + Q +
Sbjct: 391 APKLGCLLPHIKSSY---ECLIYVELPFREDIRQYTFGSLPLKQDTEANKKYRPTDAQLD 447
Query: 432 AADNLVKMLDLAPSG------KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
A ++L+ DL+ + K E L+P+L NP +R Y L+ ++ P L
Sbjct: 448 AINDLINESDLSQAAEDEDGEKTEALKPKLIFNPYFQRLYQCLQHRALEPHEPLPELSPM 507
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE--KPSGSDEPNGDGSV 543
+ P + A ++ + F ++ K+KK R+ K DEP+
Sbjct: 508 IANSLNPPQEVSARCEAQCEKLKNLFKLE---KVKKEDRKTGENMFKQKEEDEPSAKKIK 564
Query: 544 SDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
D + V ++G +TP+ DF ++++++D D ++A M+ ++ L+ +S
Sbjct: 565 MDDDLGGGLADITKAEVTEVGTVTPVDDFISLINQKDA-DKFEEASGQMQKRVEQLVTDS 623
Query: 604 NEGINYPKAVELLVALRKGCI 624
Y KA++ L ALR+ I
Sbjct: 624 FGPQFYGKALDCLKALRQQSI 644
>gi|390331386|ref|XP_788472.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 729
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 168/671 (25%), Positives = 311/671 (46%), Gaps = 77/671 (11%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HLPQGTCAGDFLDAIVVGVDMLIKKY 113
+ N++ Y+++ V + ++ D L+Q ++ ++ T +GDF+DA++V +D++
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQASTESGDFVDALIVAMDLIHDAT 117
Query: 114 GETYK--GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN---------- 161
E K + L +D D + + + ++ GL N
Sbjct: 118 SEKASKFTKNRIILFSDLGGEFADDKLQNVTHSLKAMKTEVNMIGLPFDNTDGGGNGDDA 177
Query: 162 ---------------IVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 205
+ ++GE M ++ E + + F + A T+F
Sbjct: 178 RDQPSTSRGRGPPRKVKTPQQMAGERLVMNIVEEVNGCIYSFDEVIPAVTMF-------- 229
Query: 206 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ R + P T ++ +LE+ ++KI V Y K E + K K +F +
Sbjct: 230 ---EKRAVRP-TPWKVNLEIGSELKIPVSGYLKVKEATTKSWKSTFQKGHR--EFTPQTI 283
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDAS 324
+ + +D V E +++GYRYG ++PIS + + + +K P K +++LGFT S
Sbjct: 284 RSKHLN---DDEETEVEKEDQVEGYRYGNDIIPISEEDKKNMDYKKPGKVMQVLGFTKDS 340
Query: 325 NILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
I +H + + V +F A+P + A ++ SAL A+ E N VAIVR + G + +G L
Sbjct: 341 KIKKHQQIGNSVYIFYAQPDDQAAAMSFSALVNALYETNSVAIVRRAY-SGSSAPRIGFL 399
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
P++ K N FY LPFAED+R + F S QP+E+Q A D+L+ +DL
Sbjct: 400 APHI--KANYEALFYIE-LPFAEDLRMYTFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLM 455
Query: 444 PS-----GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
+ G E L+P+ T NP +R L ++ + D P ++ ++ +P +
Sbjct: 456 TAEEDEDGDTEALKPKNTLNPYTQRLCQCLMHRALNPDDPIPGIETAIATYLQPCRAVAV 515
Query: 499 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD-EPNGDGSVSDAQAVN----SME 553
+ + ++A F +++ + T + + G D EP + D + VN SM
Sbjct: 516 QCEPDVEAMQKLFKLEKAKAKENVTGDSIWKASDGGDGEPARKKAKVDDE-VNGGDLSMA 574
Query: 554 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 613
+ V ++G + P+ DF+A++S++D D +A M +I L++ S Y KA+
Sbjct: 575 GMAMGVVTEVGTVDPVGDFKAIISQKD-EDRFKEAAGQMGRRILQLIKESFGSQLYGKAL 633
Query: 614 ELLVALRKGCI 624
+ L R+ I
Sbjct: 634 DCLRVYREQAI 644
>gi|118379947|ref|XP_001023138.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89304905|gb|EAS02893.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 757
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 177/695 (25%), Positives = 298/695 (42%), Gaps = 100/695 (14%)
Query: 5 REALLLLLDVSPSMHSVLPD----------VEKLCSRLI-QKKLIYGKNHEVGVILFGTE 53
+EA ++LLD+ SM L D + C +L+ Q+K+ K HEVG+ILFG +
Sbjct: 4 KEATIILLDMGSSMQQYLGDRGTNGQKRIEIAVNCIKLLLQQKMFNTKTHEVGLILFGLK 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVD----- 107
+ ++ + G DI + VQ LK C GD +AI +D
Sbjct: 64 DEGDDKIMYIRGIGK----PDIDFLKN--VQDLKDYQSDECEGGDIFEAIEQTIDVIHDY 117
Query: 108 -----------MLIKKYGET-YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA- 154
++ +G+T YK K+ + LI A V TK ++ I +
Sbjct: 118 VKEKKYEKKIQLMTAGFGKTSYKEKQIMDLIEKA------RKVQTK---INVIGFDFLKK 168
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRD 212
+ N V + R + N L ++ + + S +++ +TR
Sbjct: 169 YNPEESNTDVLKKDDAAQNTRQNL-NQKLFSVVKDELGEQIQLFPSDVAIKIYEQFRTRQ 227
Query: 213 ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 272
++ + F GDL+L+ + I V ++ KT EEK P LK YS + +++ D
Sbjct: 228 VNLRSKFNGDLQLAPNLNIAVQMFTKTSEEKLPGLKMYSLAVDFNPHCESGQIERDVIMA 287
Query: 273 SVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
EDP+ + K Y YG Q++P++ A + + + +K+LGF D+ + R +
Sbjct: 288 LQEDPNLNPIDKSNITKAYHYGKQLIPVTQALEAQMNYTSNRELKVLGFVDSKKVPRQSF 347
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M V++ IA +S A ++AL +M + NK AI R VWR + VLTP + +
Sbjct: 348 MAGVDIIIANKNDSVAKKGIAALCHSMIQTNKYAIARYVWRNNGAPKLC-VLTPQIGKDY 406
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-EI 450
+ Y +P +E VR+FQF S + ++QQ+ +L+ +DL G E
Sbjct: 407 ---ECLYMCQIPTSESVRDFQFNSLK------ESTKEQQDLMGSLIDKMDLMNLEDGEEA 457
Query: 451 LQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
LQ + T NP + FY H D PPLD +++ P+ + ++ +
Sbjct: 458 LQMKYTFNPTRQYFYQTVFHRVFNPPDADTKIPPLDPNIRDYITPEKKVYPKAAEELKKI 517
Query: 508 CGQFVIKENPKLKKSTRRFLREK--------PSGS-DEP-------NGDGSVSD----AQ 547
F ++E + +++ ++ P+ + + P NG D AQ
Sbjct: 518 KESFQLQEQEIKDEISKKIFWQQLFNPNYQVPAANINAPQVQIKMENGQMESEDVEQQAQ 577
Query: 548 AV----NSMESKPVV------------TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 591
+ +E+ P+ V K+ ++P+ DF MM+ + D V AI
Sbjct: 578 ILVDVKEELENIPISKKFAFDDYNKDDVVRKVSSVSPVDDFFKMMTNKR-EDLVSDAISQ 636
Query: 592 MKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
++ I L+E S G Y KA+E + A RKGC E
Sbjct: 637 IQGMISQLIETSIRGSYYEKALECIKAFRKGCTSE 671
>gi|363736086|ref|XP_422072.3| PREDICTED: X-ray repair cross-complementing protein 5 [Gallus
gallus]
Length = 730
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 173/677 (25%), Positives = 303/677 (44%), Gaps = 84/677 (12%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L LDV +M S P E K+ ++ +Q+++ EV V+LFGT
Sbjct: 1 MARGGKSAIVLCLDVGITMSSSAPGEESSLEQAKKVVTKFLQRQVFAESKDEVAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+NEL Y+++ V + + + D L++ +++ Q G+ DFLDAI+V +D+L K
Sbjct: 61 DGTKNELASR-DQYQNITVHRSLMLPDFDLLEDIQNRIQLGSQQADFLDAIIVCMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------- 163
+ G+ ++ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 ETLGKKFE-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGISLQFFLPFPVDGA 171
Query: 164 -----VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKT 195
AS+ + H M + E L I++ + S +
Sbjct: 172 DGHGDTSASIYSQLHRNSFPRKRLTAQQKEGVDVVKKLMHTLDEEGGLEEIYTFRESLER 231
Query: 196 LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 255
L + R A + L + + I++ YK EEK D
Sbjct: 232 LAMFKKIERRPA----------AWSCQLTIGSNLSIRIVAYKALTEEKVKKTWTVVD--- 278
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KS 314
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K
Sbjct: 279 -AKTLRKEDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKC 337
Query: 315 VKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+LGF+ +S I RH YM + L + A + A VA SAL +A+ E+N VAIVR + +
Sbjct: 338 FSVLGFSRSSQIQRHCYMGNQVLKVFAAKDDENAAVAFSALVQALDELNVVAIVRYAYDR 397
Query: 374 GQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 433
+ + +GV P + + + ++ LP+ EDVR++ F S K P Q A
Sbjct: 398 -RCNPQIGVAFPCIKDTY---ECLFYVQLPYMEDVRQYMFSSL-KNNKKCTPTADQLSAI 452
Query: 434 DNLVKMLDLA-PSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
D+L+ ++L GE + +P PNP +R Y L+ K+ H + PP++ L +
Sbjct: 453 DSLIDSMNLVYEDHNGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLE 512
Query: 489 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQ 547
+ E + ++ ++ F +K+ K K+ K D PN + D +
Sbjct: 513 MLEVPCVVKERCKAPLEKVKALFPLKDAGKKKEEKTAQDIFKDEHEDGPNAKRRKIEDEE 572
Query: 548 AVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGI 607
S+ V +G + P +DF+ ++ +++ D+ D + + + N+I LEN +
Sbjct: 573 DSFSIMKLAEGNVTSVGSVNPAEDFQILVRQKN-ADFKDVS-QQLINRIDQFLENRSSQY 630
Query: 608 NYPKAVELLVALRKGCI 624
Y K + + R I
Sbjct: 631 -YMKGINCIRVFRGEAI 646
>gi|348519928|ref|XP_003447481.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oreochromis
niloticus]
Length = 723
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 173/668 (25%), Positives = 302/668 (45%), Gaps = 74/668 (11%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 1 MAGSKTAVVLCMDVGLTMSNSAPGEESSFELAKKVIQKFVQRQVFSETKIELALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK 112
T+N L+++ G Y++++V + +++ D L+ +++ Q + GD+LDA+VV +D+L
Sbjct: 61 STDNPLSQD-GQYQNIRVHRHLRIPDCELLIEIENQVQPESKEGDWLDALVVCMDLL--- 116
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV--------- 163
+ ET KGKK+ CL + L D + T E+ + I + G+ M+ +
Sbjct: 117 HTET-KGKKYDCL---NIALLTDLNTQTNEESLEVIINNLTQSGITMQFFLPFPVEEDKE 172
Query: 164 ----VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV----DSTTSLRGARKTRDISP 215
G P + + N+ K +L V D + R A I
Sbjct: 173 GQGDSERRDPGHPGTGKGLSREQKKNMELVKEMMLSLDVEDGLDEIHTFRNA-----IEE 227
Query: 216 VTIFR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ +F+ L + + I++ YK +EK P + A S K +V
Sbjct: 228 LCMFKRVERRPVAWPCQLTIGSSLSIRIVGYKAVTDEK-PKKMWITVDAQSHQK---DDV 283
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDAS 324
K + Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT S
Sbjct: 284 KRETVYCLDDDNETEVQKDDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQS 343
Query: 325 NILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
I RH +M L I A + A VA+SAL RA+ E+ VAIVR + + V G
Sbjct: 344 AIHRHQFMGSQILKIFAARDDEHAGVALSALIRALNELQMVAIVRYAYNRTSNPQV-GAA 402
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDL 442
P + + + + LPF ED+R F FPS + P++ Q A D+L+ M+ +
Sbjct: 403 FPCIKQD---SECLMYVQLPFMEDLRHFTFPSLEN--KKFTPSDAQLSAVDSLIDSMMLV 457
Query: 443 APSGKGE---ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 499
GE + +P PNPA +R + L ++ PP++ LK + +
Sbjct: 458 EEDENGEQRDLFKPHRIPNPAFQRHFQCLHHRAVSPGTPLPPIEPWLKAALDRPEVITER 517
Query: 500 SQSAIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
Q +D +F + E KLK S + F +E + + + N E
Sbjct: 518 CQDPLDVLKRKFPLTEVEKKKKLKTSAQIFGKESEESEAKKVKEDEAEEYNLANIAEG-- 575
Query: 557 VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELL 616
+V +G + P +DF A++ ++ P + + + ++I LL N N Y K++ +
Sbjct: 576 --SVTSVGSVDPARDFRALIKQKILP--FGEVCQQLTHRIEQLLSNKNTQY-YMKSITCI 630
Query: 617 VALRKGCI 624
A R+ +
Sbjct: 631 QAFREQSV 638
>gi|294948884|ref|XP_002785943.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900051|gb|EER17739.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/623 (24%), Positives = 277/623 (44%), Gaps = 88/623 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEK--------------LCSRLIQKKLIYG-KNHEV 45
MA ++ +LLLDV +M P + IQ+KLI G K+ +V
Sbjct: 1 MASRKKYYVLLLDVGRTMSDTCPSTSQQPQAGRTKMDLAIEAAKLFIQQKLILGGKSTQV 60
Query: 46 GVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT-CAGDFLDAIVV 104
++L G++ T N L + GGY++++V++D+ V D ++ L + G+ D + ++V
Sbjct: 61 ALVLIGSQRTRNRL--QHGGYQNIEVIKDLAVPDIDFLRCLTSIDYGSPYTADVVGGLIV 118
Query: 105 GVDMLIKKYGETYKGK----KHLCLITDALCPLKD----PDVGTKEDQVSTIARQMVAFG 156
+DM+ + T K K + + ++TD P++ P + + ++++ + + FG
Sbjct: 119 ALDMI---HSATEKSKARSQRTVLILTDGCTPVQGAADLPSIVQRMNEIN-VEPIIATFG 174
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ P + ++E+ + ++ + L ++ L +++D +
Sbjct: 175 TPL------------PEVHAVLES-----VAARSEKGQYLQEEALFELLTQVRSKDTQQI 217
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
+ R DLEL++ MKI +W Y KT + PTLKK S + VK+D Y +V+D
Sbjct: 218 SKCRVDLELTKYMKIPIWCYLKTSKVTLPTLKKESTHTSAA-------VKMDRVYYAVDD 270
Query: 277 P-SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KD 334
P + +P E+R K Y+YG Q V + ++K+ +K + +LGF + I + +
Sbjct: 271 PDGEAIPAEERAKAYKYGSQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGES 330
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 394
+ AEP N A A+S+L +AM M + R +R + V L P++SE+
Sbjct: 331 IECVAAEPNNVDAAKALSSLIKAMDAMGVYMLARYCFRNDVKPKYV-CLAPHISERHT-- 387
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK-GEILQP 453
Y N LP+++DVR +++ A D L+ +DL G E+L+
Sbjct: 388 -CLYMNQLPYSDDVRT---DGIIFDDFDTDLTDKETIAIDRLMDSMDLEDDGDYHELLKM 443
Query: 454 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 513
+ NP L RF+ + ++E +A +D + P+ + A ++A F +
Sbjct: 444 KQIFNPTLLRFWRTVVRRAEDPEAPIVGIDKQIDACLHPERIIEARFLKDVNALREVFTL 503
Query: 514 KENPKLKKSTRRFLREK------------------------PSGSDEPNGDGSVSDAQAV 549
+ P KK T+R+ R+ P+ P G S S Q
Sbjct: 504 VKVPVDKKKTKRYWRDAVDREAEGSSKKPPSVDPTKLVFDFPTSDSIPGGAPSTSAQQQS 563
Query: 550 NSMESKPVVTVDKIGDLTPIQDF 572
+ +IG ++P++DF
Sbjct: 564 GEGGRAEMFPQVQIGMVSPVRDF 586
>gi|326922950|ref|XP_003207705.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Meleagris gallopavo]
Length = 796
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 167/666 (25%), Positives = 296/666 (44%), Gaps = 83/666 (12%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S P E ++ ++ +Q+++ EV V+LFGT+ T+N L
Sbjct: 33 AIVLCLDVGTTMSSSAPGEESPLEQAKRVMTKFLQRQVFAESKDEVAVVLFGTDGTKNNL 92
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + + D L++ ++++ Q GT DFLDAI+V +D+L ++ G+ +
Sbjct: 93 ASR-DQYQNITVHRSLMLPDFDLLEDIQNMIQLGTQQADFLDAIIVCMDLLQQETLGKKF 151
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 165
+ K+H+ L TD P+ EDQ+ I + G ++ +
Sbjct: 152 E-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGTSLQFFLPFPVDGADGRGDAS 203
Query: 166 ASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
AS+ + H M + E L I++ + S + L +
Sbjct: 204 ASIFSQLHQNSFPRKRLTAQQKEGIDVVKKLMHTLDEEGGLEEIYTFRESLERLAMFKKI 263
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
R A + L + + I++ YK EEK + D
Sbjct: 264 ERRSAP----------WSCQLTIGSNLSIRIVAYKALTEEKVKKIWTVVD----AKTLRK 309
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 321
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF+
Sbjct: 310 EDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFS 369
Query: 322 DASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+S I RH YM + L + A + A VA SA +A+ E+N VAIVR + + + + +
Sbjct: 370 RSSQIQRHCYMGNHVLKVFAAKDDENAAVAFSAFVQALDELNVVAIVRYAYDR-RCNPQI 428
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
GV P + + + ++ LPF EDVR++ F S K P Q A D+L+ +
Sbjct: 429 GVAFPCIKDAY---ECLFYVQLPFMEDVRQYVFSSL-KNNKKCSPTVDQLSAIDSLIDSM 484
Query: 441 DLA-PSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
+L GE + +P PNP +R Y L+ K+ H + PP++ L ++ E
Sbjct: 485 NLVYEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLEMLEMPCV 544
Query: 496 LLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQAVNSMES 554
+ ++ ++ F +K+ K K+ K D PN D + S+
Sbjct: 545 VKERCKAPVEKVKALFPLKDAGKKKEEKTAQDIFKDDHEDGPNAKRRKTEDEEDSFSIMK 604
Query: 555 KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 614
V +G + P +DF+ ++ +++ D+ D + + + N+I LEN + Y K +
Sbjct: 605 LAEGNVTSVGSVNPAEDFQILVRQKNA-DFKDVS-QQLINRIDQFLENRSSQY-YMKGIN 661
Query: 615 LLVALR 620
+ R
Sbjct: 662 CIKVFR 667
>gi|432932472|ref|XP_004081756.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oryzias
latipes]
Length = 725
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 175/672 (26%), Positives = 312/672 (46%), Gaps = 80/672 (11%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA + AL+L +DV SM + P E K+ + +Q+++ EV ++LFGT+
Sbjct: 1 MASAKSALVLCMDVGFSMSNSGPGEESPFDLSKKVIQKFVQRQVFAETKDEVALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIK 111
T+N L ++ Y+++ V + + V D L++ ++H P+G A D+LDA+VV +D+L K
Sbjct: 61 ATKNPLEQD-EQYQNIVVHRHLMVPDFDLLEEIEHQIHPEGQQA-DWLDALVVCMDLLQK 118
Query: 112 KYGETYKGKKHLCLITDALC----------------------------PLKDPDVGTKED 143
+ + ++ L+TD LC P++D + G +
Sbjct: 119 ETQGKKCDRLNIVLLTD-LCTQVSPDKLEVIIENLKQADITLQFFLPFPVEDAEEGQGDG 177
Query: 144 QVSTIARQMVAFGLRMKNIVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
+ GL + ++ L H M + E D L +++ +++ + L +
Sbjct: 178 EQRDPGHPGAGKGLSREQ---QSGLEMVKHIMLSLDEEDGLNEVYTFRNAIEQLCM---- 230
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
K D P+ + L + + I++ YK EEK + D A S +
Sbjct: 231 -----FKRIDRRPMA-WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVD-AQSNQR--- 280
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 321
+VK + Y +D V E I+G+RYG +VP S + E +K+K + KS +LGFT
Sbjct: 281 EDVKKETVYCLDDDNETEVQKEDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKSFAVLGFT 340
Query: 322 DASNILRHYYMKDVNLFIAEP-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ +LRH +M + I P + A VA+SAL R + E+ VAIVR + + + + V
Sbjct: 341 KQNLVLRHQFMGSQVVKIFPPKDDEHAGVALSALIRGLDELKMVAIVRYAYDR-RSNPQV 399
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KM 439
G P + + + + LPF ED+R F FPS P+E Q A D+L+ M
Sbjct: 400 GAAFPCIKQTY---ECLIYVQLPFMEDLRPFAFPSLENNK-KICPSETQLSAVDSLIDSM 455
Query: 440 LDLAPSGKGE---ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
+ + GE +L+P PNPA +R + L ++ + A PPL+ L+ + +
Sbjct: 456 MLIEKDENGELIDLLKPHHIPNPAFQRHFQCLHHRAVNPGAPLPPLEPWLQAKLDRPEVI 515
Query: 497 LAESQSAIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQAVNSM 552
Q++++ +F + E KLK S + F ++ S E + D G +A+ ++
Sbjct: 516 KERCQASLEEIKRKFPLTEVEKKKKLKTSAQIFGKD----SKEASADKGKEDEAEEEYNL 571
Query: 553 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 612
+V +G + P +DF ++ ++ P +A + + ++I LL N N Y K+
Sbjct: 572 ADIAEGSVTSVGSVDPARDFRTLLKQKSLP--FGEACQQLTHRIEQLLSNKNTQY-YMKS 628
Query: 613 VELLVALRKGCI 624
+ + A ++ +
Sbjct: 629 ITCIQAFKEQSV 640
>gi|410897090|ref|XP_003962032.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 726
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 175/676 (25%), Positives = 307/676 (45%), Gaps = 87/676 (12%)
Query: 1 MARTREALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
MAR R AL+L +DV SM + P D +K+ + +Q+++ E+G++LFGT+
Sbjct: 1 MARARSALVLCMDVGFSMSNSAPGEEAPFEDAKKIIQKFVQRQVFAESKDELGLVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK 112
T+N L ++ G YE++ V + + V D L++ +++ L D++DA+VV +D+L +
Sbjct: 61 STKNPLHQD-GQYENITVFRQLMVPDFELLEEIQNQLQPENQQADWMDALVVSMDLLQTE 119
Query: 113 YGETYKGKKH----LCLITD------------ALCPLKDPD----------VGTKEDQ-- 144
KGKK+ + L+TD + LK D VG KE+
Sbjct: 120 I----KGKKYDRLNIVLLTDLNIQASSDQLDIIIENLKKADITLQFFLPFPVGDKEESGG 175
Query: 145 ---VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII----ENDNLLNIFSKKSSAKTLF 197
+S + GL R G M+ I+ E+D L I++ +++ + L
Sbjct: 176 DGPISDPGHHGMGKGLS------REQKEGLDMMKHIMLSLDEDDGLSQIYTFRNAIEQLC 229
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
+ R P+ + L + + I++ YK +EK K D A S
Sbjct: 230 MFKQIERR---------PMA-WPCQLTVGSCLSIRIVGYKAVMQEKLKKTWKTVD-AQSN 278
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 316
+ V V Y +D V ++ I+G+RYG +VP S + E +K+K + K
Sbjct: 279 RQEDVKRVTV---YCLDDDNETEVQVDETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFA 335
Query: 317 LLGFTDASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGFT + + RH ++ + + +F A+ + A VA+SAL RA+ E+ VAIVR + +
Sbjct: 336 VLGFTKQNLVQRHQFIGNQVIKIFAAK-DDEHAGVALSALIRALHELQMVAIVRYAYDR- 393
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ + +G P + ++ + + LPF ED+R+F FPS P + Q A D
Sbjct: 394 RCNPQIGAAFPCIKQQY---ECLMYIQLPFMEDLRQFSFPSLENNK-KITPTDAQLTAVD 449
Query: 435 NLVKMLDLAPSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 490
+L+ + L G E I +P PNP +R + L ++ + PP++ LK I
Sbjct: 450 SLIDSMMLVEEGDEEKPKDIFKPHHIPNPDFQRLFQCLHHRAVNPGTPLPPMEPWLKAIL 509
Query: 491 EPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN 550
E + Q+ ++ F + E K KK+ + S EP+G + + +
Sbjct: 510 ERPDVINERCQAPLEELKRVFPLTEVEK-KKNVKTSAEIFGKDSGEPDGKKAKLEEEEEE 568
Query: 551 SMESKPVV--TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
+ TV +G + P +DF ++ ++ P + + + +I LL N N
Sbjct: 569 EYNLANITEGTVTSVGSVEPARDFRVLVKQKRIP--FGEVCQQLIQRIEQLLSNRNTQY- 625
Query: 609 YPKAVELLVALRKGCI 624
Y K++ + A R+ +
Sbjct: 626 YMKSITGIQAFREQSV 641
>gi|327282822|ref|XP_003226141.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Anolis
carolinensis]
Length = 748
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 174/676 (25%), Positives = 304/676 (44%), Gaps = 83/676 (12%)
Query: 1 MARTREALLLLLDVSPSM-HSVLPD------VEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M R + A++L +DV SM HS L + +K+ + +Q+++ E+ ++LFGTE
Sbjct: 1 MWRAKSAVVLCMDVGFSMSHSGLGEESPFEQAKKVITVFVQRQVFAESKDEISLVLFGTE 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVDMLIKK 112
T N L E Y+H+ V + + + D L++ ++++ Q T GD LDA++V +D+L ++
Sbjct: 61 NTANSLASE-DQYQHIAVHRHLMLPDFDLLEDIQNVIQPTSEQGDILDALIVSMDLLQRE 119
Query: 113 -YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK----------- 160
G+ Y+ K H+ + TD P EDQ+ I + G+ ++
Sbjct: 120 TVGKKYE-KLHIEVFTDLGSPFS-------EDQLDVIIANLKKTGISLQFFLPFPMNDEG 171
Query: 161 ---------------NIVVRASLSGEPH---------MRVIIENDNLLNIFSKKSSAKTL 196
N R LS + M + + D L I++ + S + L
Sbjct: 172 GSGDKTDCAHSHKPQNSFPRKGLSEQQKEGLKMVRKLMVSLDKEDGLEEIYTFRESLEQL 231
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ R P+ + L + K+ IK+ YK EEK T K +
Sbjct: 232 SMFKKVERR---------PMP-WPCQLTIGSKLSIKIVAYKSFTEEK--TKKSWIVVDAK 279
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
T K +++ + Y +D V E I+G+RYG +++P S + E +K+K + K
Sbjct: 280 TSK--KDDLQKETVYCLNDDDETEVQKEDVIQGFRYGSEIIPFSKVDEEQMKYKTDGKCF 337
Query: 316 KLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF+ AS +LRH YM V A + A VA+S+L A+ E++ VAIVR V+ +
Sbjct: 338 AVLGFSKASQVLRHRYMGHQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYVYDRR 397
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
Q V G P + N + + LP+ ED+R++ F S K P E Q A D
Sbjct: 398 SQPQV-GAAFPLIK---NEYECLAYVQLPYMEDLRQYMFSSL-KNNKKCTPTEDQLLAVD 452
Query: 435 NLVKMLDLAPSGKGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
+L+ + L + E + PNP +R Y L+ K+ H D+ PP++ L +
Sbjct: 453 SLIDSMSLVYEDESEGTVEDTFKTSKFPNPQFQRLYQCLQHKAFHPDSPLPPIEKHLLDM 512
Query: 490 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQA 548
E + + Q+ ++ F +K+ K+K+ K + D P+ V D
Sbjct: 513 LEAPQVVREKCQAPLEKVKSLFPLKDAGKMKEQKTAQHIFKDNTVDGPSSQKAKVEDDDV 572
Query: 549 VNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
+ V +G + P+++F ++ R+ D+ + + +K+ I LEN +
Sbjct: 573 GFRIADLAEGNVTAVGSVNPVENFRVLV-RQKTVDFKEVNQQLIKH-IHQFLENRGH-LY 629
Query: 609 YPKAVELLVALRKGCI 624
Y K+++ + R+ I
Sbjct: 630 YSKSIDCIKIFREEAI 645
>gi|410969382|ref|XP_003991175.1| PREDICTED: X-ray repair cross-complementing protein 5 [Felis catus]
Length = 1104
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 170/688 (24%), Positives = 303/688 (44%), Gaps = 104/688 (15%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+R A++L +DV +M + LP E KL + +Q+++ E+ ++LFG
Sbjct: 1 MARSRSKAAIVLCMDVGSAMSNSLPGEESPFELAKKLMTVFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCPL----------------------------KDPDVGTKE 142
++ GK+H+ + TD P K+ G +
Sbjct: 120 QETVGKKFGKRHIEVFTDLSSPFSQDQLDIIIHNLEKSGISLQFFLPFPVGKEDGTGDRG 179
Query: 143 DQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKS 191
D S + + +F G+RM V+ SL GE D L I+S
Sbjct: 180 DGNSCLDQHGPSFPLKGITEQQKEGIRMVKKVM-MSLEGE---------DGLDEIYS--- 226
Query: 192 SAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 251
F +S LR +KT S + L + + IK+ YK +EK K S
Sbjct: 227 -----FSESLRQLRVFKKTERYS--VPWLCTLTIGSNLAIKIVAYKAIMQEKV----KKS 275
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
+++ + Y +D VP E I+G+RYG +VP S + E +++K
Sbjct: 276 WTVVDARTLKKEDIQKETVYCLQDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMRYKS 335
Query: 312 E-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E K +LGF +S + R Y++ + L + A + A VA+S+L A+ E++ VA+VR
Sbjct: 336 EGKCFSVLGFCRSSQVHRRYFVGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRY 395
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
+ G+ + VG+ P + + + + LPF ED+R++ F S K P E Q
Sbjct: 396 AY-AGRTNPQVGMAFPYIKDAY---ECLMYVQLPFMEDLRQYMFSSL-KNSKKCTPTEAQ 450
Query: 430 QEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDD 484
A D L+ + L + E +L PNP +R Y L ++ H PP+
Sbjct: 451 LSAVDALIDSMSLVKKDEKEDTIEDLFPTTKIPNPQHQRLYQCLAHRALHPQEPLPPIQQ 510
Query: 485 SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG--DGS 542
+ + +P + A+ Q + F + E K K P+ + P+ +G
Sbjct: 511 HILNMLDPPAEVTAKCQIPLSKIKTVFPLTEATKKKDQV-------PAQNIFPDNHEEGP 563
Query: 543 VS------DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 596
S + +A S+ S +V ++G + P ++F ++ ++ ++A + N+I
Sbjct: 564 ASKKLKTQEGEACFSVSSLAEGSVTRVGSVNPAENFRVLVRQKKAS--FEEASRQLINQI 621
Query: 597 FGLLENSNEGINYPKAVELLVALRKGCI 624
L ++NE + K+++ + R+ I
Sbjct: 622 EQFL-DTNETPYFMKSMDCITVFREEAI 648
>gi|417404249|gb|JAA48890.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen [Desmodus rotundus]
Length = 732
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 173/687 (25%), Positives = 304/687 (44%), Gaps = 78/687 (11%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR++ A++L +DV +M++ P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSKNKAAVVLCMDVGFTMNNSFPGEESPFEQAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L E Y ++ V + + + D +L++ ++ Q G+ DFLDA+VV +D++
Sbjct: 61 TDGTENALACE-DQYRNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALVVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV---------AFGLRM 159
K+ KKH+ + TD P KD D+ + S+I+ Q G R
Sbjct: 120 KETVGKKFEKKHIEVFTDLSSPFSKDQLDIIIHNLRTSSISLQFFLPFPVGKEDGTGDR- 178
Query: 160 KNIVVRASLSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ +R+ G P M + D L I+S S + L V
Sbjct: 179 GDSNLRSDHPGSPFPLKGITEQQKEGVQMVKRVMTALEGEDGLDEIYSFSESLRQLCV-- 236
Query: 201 TTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ I +I +R L + + I++ YK +E+ + S
Sbjct: 237 ---------FKKIERSSIPWRCQLTIGSNLSIEISAYKSIVQERI----RASWTVVDART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDQEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R Y+M L + A + A VA+S+L A+ E++ VAIVR + + + +
Sbjct: 344 GFCRSSQVHRKYFMGSQVLKVFAAKDDEAAAVALSSLTHALDELDMVAIVRYAYDR-RSN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ FPS K + P E Q A D L+
Sbjct: 403 PQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEAQLSAVDALI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
++L + E +L PNP +R + L + H PP+ + + +P
Sbjct: 459 DSMNLTKKDEEEDTIEDLFPTTKIPNPQFQRLFQCLLHRVLHPQERLPPVQQHVLNMLDP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR---FLREKPSGSDEPNGDGSVSDAQAV 549
+ A Q + F + E K K F GS+ + + A
Sbjct: 519 PTEVTARCQMPLSKIKALFPLTEAIKRKNQLTAQDIFQDNHEEGSN--SKKFKTEEGGAH 576
Query: 550 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 609
S+ S V+V K+G ++P +DF ++ +++ ++A + N I L +NE +
Sbjct: 577 FSLSSLAKVSVTKVGSVSPAEDFRVLVRQKNAS--FEEASLQLINHIEQFL-GTNETPYF 633
Query: 610 PKAVELLVALRKGCILEQVYLSVSFFL 636
K+++ + A R+ I Y + FL
Sbjct: 634 MKSMDCIRAFREEAIQFSEYQRFNNFL 660
>gi|307108658|gb|EFN56898.1| hypothetical protein CHLNCDRAFT_144569 [Chlorella variabilis]
Length = 674
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 58/506 (11%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKK----------LIYGKNHEVGVILF 50
M+ RE+++ LLDV P MH + + + +K +++ EV ++LF
Sbjct: 1 MSNKRESVVFLLDVGPRMHPHVAHAARAAGDFMTQKASRRARPTPAMLHKVKDEVCLLLF 60
Query: 51 GTEETEN-ELTK---EVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
GT +T+N E TK E GG Y H+ D+ + +++L L G DF +A+
Sbjct: 61 GTSKTDNREHTKSAMEEGGEGEYAHIVEAHDLAPPEASYIKTLHTLQGGQGRSDFKEALA 120
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDALCPLK--DPDVGTKEDQVSTIARQMVAFGLRMKN 161
V +L+++ K + L+T+ LC DPD D +++ +A GL+ +
Sbjct: 121 VAAAVLVQE--REAASAKRIVLVTN-LCSRAQDDPD-----DALTSC----LAEGLQHQG 168
Query: 162 IVVRASLSGEPHMRVIIENDNLLNI-----FSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
I + L P E D N+ ++ S + S +L GA ++
Sbjct: 169 IFLDVLLLDVPEDDERYEQDKTYNLNQVAAICQELSHRERHFSSALALTGAFPAHEVLAR 228
Query: 217 TIFRGDLELSEKMKIKV-------WVYKKTGE---EKFPTLKKYSDKAPSTDKFATHEVK 266
+ G L + K+ IK W+ K G+ EKFP + S + A V
Sbjct: 229 AYYSGVLSIGTKLNIKAGTAGLYSWLVKTAGKADKEKFPAAGRESTVVEGVVEAALEGVD 288
Query: 267 V------DYEYKSVEDPSKVVPPEQRI-KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+Y Y E+ PEQ + YRYG +VP + + + F E+ +KL+G
Sbjct: 289 TGVPRGREYYYVDQEEHGPEEVPEQEVASAYRYGINLVPFEADQRRDLAFPTERGMKLIG 348
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F I RH YM ++ +A+ + + VA++AL M+ + AI+R V + + +
Sbjct: 349 FLPEDAIPRHLYMAKCDVVVADKASQASCVAMAALVAGMRRQRQKAILRWVAKAYSRPEL 408
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+ +P + + P N LPF ED+R+++FPSF+K SW+P+E Q EAA LV
Sbjct: 409 F-LASPVPAGATSAP-HLLLNALPFMEDLRDYRFPSFTK--KSWEPSEAQVEAAAALVAS 464
Query: 440 LDLAPSGKGEILQPELTPNPALERFY 465
+ L G E L PE TP+PAL R Y
Sbjct: 465 MSLG-QGDLEQLLPERTPDPALHRLY 489
>gi|326431135|gb|EGD76705.1| hypothetical protein PTSG_08056 [Salpingoeca sp. ATCC 50818]
Length = 534
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 234/483 (48%), Gaps = 62/483 (12%)
Query: 1 MARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M+R+ + ++LDV PSM S L K +Q+K+++ K EV +I FG
Sbjct: 1 MSRSGDLTAIVLDVGPSMSTKLSSGKSHLETAVKAIDLFVQQKVLHTKKDEVALITFGDN 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HLPQGTCAGDFLDAIVVGVDMLIKK 112
ET+N L + G Y+H+ V + + D L++ ++ + G DF+DA+VV +D LI
Sbjct: 61 ETDNPLASD-GEYQHICVRRTLTSPDLDLLRFIETEIQPGDQPTDFVDALVVALDCLITG 119
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 172
+ KG K + + TDA P+ D + DQ I M A G+ ++ I V
Sbjct: 120 GEKK-KGDKKIYMFTDAGSPVNDSSL----DQ---IIDGMKAHGIDLRVIGVGID----- 166
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
+S + +K V I + ++ E +I
Sbjct: 167 -------------------EDGDEDDESVAHMTQTQKEN----VQIIKRIVDAVEG-EIP 202
Query: 233 VWVYKKTGEEKFPTLKKYS---DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKG 289
V++Y + E PTLKK S D P+ A E +V Y +K ED ++V P E+RIKG
Sbjct: 203 VFLYTEEKREPRPTLKKLSALVDLDPTDADSAKVEREVTY-HKLDEDETEV-PGEERIKG 260
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
YRYG +VP E + KP+K + ++ FT N+ RH+ ++ + + + A
Sbjct: 261 YRYGRTIVPWEKMHEENLTLKPDKELSVICFTHQDNVPRHHQLEPLLCVLPAHDDEDAAR 320
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
++ LA+A+ EM VAIVR V+R + + +G+L P +SE+ Y+ LPF ED+R
Sbjct: 321 GIACLAQALHEMESVAIVRYVFR-NKAAPKLGMLFPTISEEYK---GLYYVSLPFREDIR 376
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAP------SGKGEILQPELTPNPALER 463
++F S +K + +++Q+ A ++++ +DL + E +PE T NPA++
Sbjct: 377 PYEFASLAKNK-NADFDKEQRAAVEDVIASMDLMKGYVDEDGDEVEAYEPEYTFNPAIQM 435
Query: 464 FYH 466
FY
Sbjct: 436 FYQ 438
>gi|449506901|ref|XP_002191185.2| PREDICTED: X-ray repair cross-complementing protein 5 [Taeniopygia
guttata]
Length = 879
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 162/657 (24%), Positives = 300/657 (45%), Gaps = 67/657 (10%)
Query: 7 ALLLLLDVSPSMHSV-------LPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT T N+L
Sbjct: 161 AIVLCLDVGFTMSSSSPGEESSLDQAKKIMTKFLQRQVFAESKDEVAVVLFGTNGTRNDL 220
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK-YGETY 117
E Y+++ V + + + D L++ +++ + G+ DFLDAI+V +D+L ++ G+ Y
Sbjct: 221 ASE-DQYQNITVHRSLMLPDFDLLEDIQNVIKAGSEQADFLDAIIVCMDLLQRQTIGKKY 279
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHMRV 176
+ K+H+ L TD P+ EDQ+ I + + ++ + S+ G
Sbjct: 280 E-KRHIELFTDLSSPVS-------EDQLGIIIANLKKTEISLQFFLPFPVSVEGTGDTSA 331
Query: 177 IIENDNLLNIFSKKSSA-----------KTLF-VDSTTSLRGARKTRD-ISPVTIFRG-- 221
+ N F K K ++ +D L R+ + +++F+
Sbjct: 332 SVHAHMHKNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKIE 391
Query: 222 --------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
L + + I++ YK EE + D +V+ + Y
Sbjct: 392 RKPMPWPCQLTIGPDLSIRIVAYKSVTEENVKKVWAVVD----AKTLRKEDVQKETVYCL 447
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYM 332
+D V + I+G+RYG +VP S + E +K+K E K +LGFT +S I RHYYM
Sbjct: 448 NDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFTRSSQIQRHYYM 507
Query: 333 KDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
+ L + A G+ A VA SAL RA+ E+ VA+VR + + + + +GV P + +
Sbjct: 508 GNQALKVFAAKGDENAAVAFSALVRALDELKMVAVVRYAYDR-RCNPQIGVAFPYIKDAY 566
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 449
+ + LP+ ED+R++ F S K + P Q A D+L+ ++L GE
Sbjct: 567 ---ECLIYVQLPYMEDLRQYVFSSL-KNSKKYFPTVDQLSAVDSLIDSMNLVHE-DGETF 621
Query: 450 --ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
+ +P PNP +R Y L+ K+ + D PP++ + ++ E + Q+ ++
Sbjct: 622 EDLFKPSKIPNPRFQRLYQCLQHKAFYPDKPLPPIEQHILEMLEMPCVVRERCQAPLERV 681
Query: 508 CGQFVI--KENPKLKKSTRRFLREKPSGSDEPN-GDGSVSDAQAVNSMESKPVVTVDKIG 564
F + K +K+ + ++ DEP+ + D + S+ + +G
Sbjct: 682 KALFPLKEVGKKKEEKTAQDIFKD---NEDEPSLKKPKIEDEEESFSIMKLAEGNITSVG 738
Query: 565 DLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
+ P +DF ++ +++ D+ D + + + N+I LEN Y K ++ + R+
Sbjct: 739 SVNPAEDFRILVRKKNA-DFKDVS-QQLINRIDQFLENKGSQY-YMKGMDCIRVFRE 792
>gi|148228702|ref|NP_001081127.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Xenopus laevis]
gi|50415233|gb|AAH77439.1| Xrcc5-A-prov protein [Xenopus laevis]
Length = 726
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 175/710 (24%), Positives = 316/710 (44%), Gaps = 80/710 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L +E YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VDQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 223
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 224 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPMPWPCQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KE 286
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 323 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 442 LA---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
L K ++ + PNP +R + L+ K+ + ++ PP+D L + E +
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQCLQHKALNPESPLPPIDQHLLDMLETPVEVKE 521
Query: 499 ESQSAIDAFCGQFVIKENPKLK--KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
+ + F ++E K K K+ +K +DEP+ D + S+
Sbjct: 522 ACMAPLATVKACFPLQEATKRKEVKTADEIFTKK---TDEPDAKKLKEDDEGF-SLLRLA 577
Query: 557 VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED-MKNKIFGLLENSNEGINYPKAVEL 615
V +G + P QDF+A++ +++ D+ K + D + +I+ L + + Y K++
Sbjct: 578 DGNVTSVGSVNPDQDFQALLRQKNT-DF--KHVSDQLIKRIYECL-DVKQTQYYMKSILC 633
Query: 616 LVALRKGCI-LEQVYLSVSFFLLW-------FAFAFWDNSCLNDMSSIVT 657
+ R+ I L QV L F L FWD ++S I +
Sbjct: 634 IKTFREEAIKLSQVRLFNDFLQLLKQKVDGSALMEFWDIIVQEEISLITS 683
>gi|4630799|dbj|BAA76954.1| human Ku80 autoantigen homologue [Xenopus laevis]
Length = 726
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 175/710 (24%), Positives = 315/710 (44%), Gaps = 80/710 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L +E YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VNQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 223
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 224 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPIPWPFQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KG 286
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 323 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 442 LA---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
L K ++ + PNP +R + L+ K+ + ++ PP+D L + E +
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQCLQHKALNPESPLPPIDQHLLDMLETPVEVKE 521
Query: 499 ESQSAIDAFCGQFVIKENPKLK--KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
+ + F ++E K K K+ +K +DEP+ D + S+
Sbjct: 522 ACMAPLAKVKACFPLQEATKRKEVKTADEIFTKK---TDEPDAKKLKEDDEGF-SLLRLA 577
Query: 557 VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED-MKNKIFGLLENSNEGINYPKAVEL 615
V +G P QDF+A++ +++ D+ K + D + +I+ L + + Y K++
Sbjct: 578 DGNVTSVGSANPDQDFQALLRQKNT-DF--KHVSDQLIKRIYECL-DVKQTQYYMKSILC 633
Query: 616 LVALRKGCI-LEQVYLSVSFFLLW-------FAFAFWDNSCLNDMSSIVT 657
+ R+ I L QV L F L FWD ++S I +
Sbjct: 634 IKTFREEAIKLSQVRLFNDFLQLLKQKVDGSALMEFWDIIVQEEISLITS 683
>gi|301625724|ref|XP_002942054.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Xenopus (Silurana) tropicalis]
Length = 712
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 159/629 (25%), Positives = 286/629 (45%), Gaps = 88/629 (13%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+LFGT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGEESPFEQAKKVMMLFLQRQVFAESKDEIAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + YE++ V + + + D L++ ++++ + G+ DFLDA++V +D+L K
Sbjct: 61 DTTDNALARG-DQYENISVHRHLMLPDFDLLEQIQNVVEPGSTQADFLDALIVSMDLLQK 119
Query: 112 K-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---VRAS 167
+ G+ Y+ + H+ + +D P DQ+ I + G+ ++ + V
Sbjct: 120 ETLGKKYE-RLHIAVFSDLSSPFS-------VDQLEVIIANLKKAGISLQFFLPFPVEEE 171
Query: 168 LSGEPHMRVIIENDNLLNIFSK---KSSAKTLFVDSTTSLRGARKTR-------DISPVT 217
+G+ ++N + S + K L + RK +S V
Sbjct: 172 EAGDS-------SNNRGDSGSSDRGRGPGKGLSDQQKEGIEMVRKIMFSLDGEDGLSEVF 224
Query: 218 IFRGDLE--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
FR LE + + I++ YK EEK + D A S
Sbjct: 225 TFRESLERLSIFKKIERRPMAWPCQLTIGSGLSIRIVGYKSVTEEKVKKTWAHVD-AKSN 283
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 316
K ++K + Y D V E I+GYRYG +VP S + E +K++ E K
Sbjct: 284 KK---EDIKKETVYCLNNDEETEVEKEDTIQGYRYGSDIVPFSKVDQEQMKYRSEGKCFA 340
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
+LGFT +S + H ++ + + I P + A+VA+S+L A+ EM+ VAIVR V+ + +
Sbjct: 341 VLGFTKSSLVPSHQFVGNQVVKIFAPSDDEAASVALSSLIHALDEMDMVAIVRYVYDR-R 399
Query: 376 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 435
+ VGV P + +K + + LPF ED+R+ F S K + P + Q A D+
Sbjct: 400 CNPQVGVAFPRIKDKY---ECLVYIQLPFMEDLRQHLFSSL-KNSKKFTPTDSQLSAMDS 455
Query: 436 LVKMLDLAPSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
L+ + L S GE + +P PNP +R + L+ K+ + +++ PP++ L+ + E
Sbjct: 456 LIGSMSLV-SDDGETTEDLFKPSKIPNPQFQRLFQCLQHKALNPESSLPPIEKHLQDMLE 514
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 551
+ ++++ F ++E K R++ DE V D AV
Sbjct: 515 APGAVTEGCRASLATMKACFPMQEATK---------RKEVKTGDEIFTKKXVPDFSAVXV 565
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRD 580
V ++G + P QDF A++ +++
Sbjct: 566 SYGNLV----QVGSVNPDQDFRALLRQKN 590
>gi|5733688|gb|AAD49720.1|AF166486_1 Ku autoantigen [Mus musculus]
Length = 732
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 296/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ +
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQHETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYFFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K + P E Q A D+L+ + L +
Sbjct: 413 KDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNMKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDHHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|74146893|dbj|BAE41402.1| unnamed protein product [Mus musculus]
Length = 708
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 297/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|74191169|dbj|BAE39415.1| unnamed protein product [Mus musculus]
Length = 732
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 297/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|22137748|gb|AAH29218.1| Xrcc5 protein, partial [Mus musculus]
Length = 731
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 297/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 5 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 64
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 65 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 123
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 124 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 176
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 177 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 236
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 292
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 293 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 352
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 353 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 411
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 412 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 467
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 468 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 527
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 528 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 587
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 588 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 641
Query: 619 LRKGCI 624
R+ I
Sbjct: 642 FREEAI 647
>gi|160333605|ref|NP_033559.2| X-ray repair cross-complementing protein 5 [Mus musculus]
gi|166900095|sp|P27641.4|XRCC5_MOUSE RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku autoantigen protein p86
homolog; AltName: Full=Ku80; AltName: Full=Nuclear
factor IV
gi|30354225|gb|AAH51660.1| Xrcc5 protein [Mus musculus]
gi|74223179|dbj|BAE40726.1| unnamed protein product [Mus musculus]
gi|148667865|gb|EDL00282.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mus musculus]
Length = 732
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 297/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|74224988|dbj|BAE38207.1| unnamed protein product [Mus musculus]
Length = 732
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 297/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLGSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 KDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|301755794|ref|XP_002913725.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Ailuropoda melanoleuca]
Length = 733
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 165/683 (24%), Positives = 300/683 (43%), Gaps = 94/683 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV P+M + L E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSGSKAAVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFG 60
Query: 52 TEETENELTKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVD 107
T+ TEN L GG Y+++ V + + + D L++ ++ Q + DFLDA+VV +D
Sbjct: 61 TDGTENAL----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMD 116
Query: 108 MLIKK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV--- 163
M+ ++ G+ ++ KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 117 MIQRETVGKKFE-KKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFP 168
Query: 164 ------VRASLSGEPH---------MRVIIEN------------------DNLLNIFSKK 190
G H ++ I E D L I+S
Sbjct: 169 VGKEDGTGDRGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFS 228
Query: 191 SSAKTLFVDSTTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 249
S + L V +TR + P T L + + I + YK +E+ K
Sbjct: 229 ESLRQLCVFKKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----K 273
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
S +++ + Y +D VP E I+G+RYG +VP S + E +K+
Sbjct: 274 KSWTVVDAQTLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKY 333
Query: 310 KPE-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIV 367
K E K +LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VA+V
Sbjct: 334 KSEGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVV 393
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
R V+ + + + VG+ P + + + + LPF ED+R++ F S K + P E
Sbjct: 394 RYVYDR-RANPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTE 448
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPL 482
Q A D L+ + L + E +L PNP +R + L ++ H PP+
Sbjct: 449 AQLSAVDALIDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPI 508
Query: 483 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDG 541
+ + +P + A+ Q + F + E K K + T + + + +
Sbjct: 509 QQHILNMLDPPTEVTAKCQIPLSKIKTAFPLTEAIKKKDQVTAQNIFQDNHEEGPTSKKL 568
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
+ +A S+ S +V +G + P ++F ++ ++ ++A + N I L
Sbjct: 569 KTEEREACFSISSLAEGSVTSVGSVNPAENFRVLVRQKKAT--FEEASRQLINCIEQFL- 625
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
++NE + K+++ + RK I
Sbjct: 626 DTNETPYFMKSMDCITVFRKEAI 648
>gi|26349273|dbj|BAC38276.1| unnamed protein product [Mus musculus]
Length = 708
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 296/666 (44%), Gaps = 68/666 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPYI 412
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + LPF ED+R++ F S K P E Q A D+L+ + L +
Sbjct: 413 K---GAYECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKNE 468
Query: 448 GEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
E + +L PNP +R Y L ++ H PP+ + + +P + A+ +S
Sbjct: 469 EEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCES 528
Query: 503 AIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVD 561
+ F + E K K + + + P ++ + + S+ S +
Sbjct: 529 PLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNIT 588
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVA 618
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ + A
Sbjct: 589 KVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIKA 642
Query: 619 LRKGCI 624
R+ I
Sbjct: 643 FREEAI 648
>gi|47226323|emb|CAG09291.1| unnamed protein product [Tetraodon nigroviridis]
Length = 727
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 163/678 (24%), Positives = 302/678 (44%), Gaps = 94/678 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT+ T N
Sbjct: 1 QSALMLCMDVGFSMSNSAPGEEPPFELAKKIIQKFVQRQVFAESKDELGLVLFGTDSTNN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKKYGET 116
L ++ G YE++ V +++ V D L++ +++ L D++DA+VV +D+L +
Sbjct: 61 LLHQD-GQYENISVFRELSVPDFDLLEQIQNQLQPENQQADWMDALVVCMDLLQR----A 115
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------- 163
GKK+ L + L D ++ DQ+ I + + + + ++ +
Sbjct: 116 RTGKKYDRL---NIVQLTDLNIQASSDQLDIIIQNLKSSDITLQFFLPFPAEDDEDGGGD 172
Query: 164 VRASLSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
S SG P M + E+D L I++ +++ + L +
Sbjct: 173 GPRSESGHPGRGKGLSRDQKEGLDMMKHIMLSLDEDDGLDQIYTFRNAIEQLRMFKQIER 232
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
R P+ + L + + I++ YK +EK D + +
Sbjct: 233 R---------PMA-WPCLLTVGSCVSIRIVGYKAVMQEKLKKTWMTVDAQTNQKEV---- 278
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDA 323
+K + Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT
Sbjct: 279 IKRETVYCLDDDNETEVQVTETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQ 338
Query: 324 SNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+ + RH ++ + + LF A+ + A VA+SAL RA++E+ VAIVR + + + + VG
Sbjct: 339 NLVHRHQFIGNQVIKLFAAK-DDEHAGVALSALIRALRELEMVAIVRYAYDR-RSNPQVG 396
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
P + + + + LPF ED+R+F FPSF V+ P E Q A D+L+ +
Sbjct: 397 AAFPCIKQHY---ECLMYIQLPFVEDLRQFSFPSFDNKKVT--PTETQLSAVDSLIDSMM 451
Query: 442 LAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAP-----PPLDDSLKKITEP 492
L G ++ + PNP +R + L+ K H PP++ LK +
Sbjct: 452 LVEEGDDGKPKDMFKVHHIPNPEFQRLFQVLKPKCLHHRVVNPGTPLPPIEPWLKAVLGR 511
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPK---LKKSTRRFLREKPSGSDEPNGDGSVSDAQAV 549
+ Q+ ++ F + + K LK S F ++ S EP+G + D +
Sbjct: 512 PDVIGQRCQAPLEELKRVFPLTQVEKKKNLKTSAEVFGKD----SGEPDGKKAKHDEEEE 567
Query: 550 NSMESKPVVT---VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEG 606
+ +T + +G + P +DF ++ ++ P + + + +I LL N N
Sbjct: 568 EEDFNLANITEGSITSVGSVDPARDFCFLVKQKSIP--FGEVCQQLIQRIEQLLSNRNTE 625
Query: 607 INYPKAVELLVALRKGCI 624
Y K++ + A R+ +
Sbjct: 626 Y-YTKSITGIQAFREQSV 642
>gi|449275319|gb|EMC84191.1| ATP-dependent DNA helicase 2 subunit 2, partial [Columba livia]
Length = 730
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 164/673 (24%), Positives = 295/673 (43%), Gaps = 90/673 (13%)
Query: 7 ALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT+ T N L
Sbjct: 1 AIVLCLDVGCAMSNSASGEESSLEQAKKVMTKFVQRQVFAETKDEVAVVLFGTDGTRNAL 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + + D L++ ++ + + G+ DFLDAI+V +D+L K+ G+ Y
Sbjct: 61 ASR-DQYQNITVHRSLMLPDFDLLEDIQDVIKPGSEQADFLDAIIVCMDLLQKETIGKKY 119
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 165
+ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 E-KRHIELFTDLSSPVS-------EDQLDIIIANLKKTGISLQFFLPFPVDDDDGGGDKS 171
Query: 166 ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRD----ISPVTIFRG 221
AS+ + H N F +K + + +R T D + + FR
Sbjct: 172 ASVCSQMHR----------NSFPRKGLTEQQ-KEGIDVVRKLMHTLDEEGGLEEIYTFRE 220
Query: 222 DLE--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
LE + + I++ YK EEK + D
Sbjct: 221 SLERLSMFKKIERKSLPWPCQLTIGSNLSIRIVAYKSVIEEKVKKVWTVVD----AKTLR 276
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 320
+++ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 277 KEDIQKETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGF 336
Query: 321 TDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
+ +S I R YYM + L + A + A VA SAL A+ E+ VAIVR + + + +
Sbjct: 337 SRSSQIQRQYYMGNQVLKVFAAKDDENAAVAFSALVHALDELKVVAIVRYAYDR-RCNPQ 395
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+GV P + + + + LP+ ED+R + F S K P Q A D+L+
Sbjct: 396 IGVAFPYIKDAY---ECLIYVQLPYMEDLRPYIFSSL-KNNKKCTPTVDQLSAVDSLIDS 451
Query: 440 LDL-APSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
++L + GE + +P PNP +R Y L+ K+ H + PP++ L ++ E
Sbjct: 452 MNLVSEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLEMLEMPH 511
Query: 495 TLLAESQSAIDAFCGQFVI--KENPKLKKSTRRFLREKPSGSDEPN-GDGSVSDAQAVNS 551
+ Q+ + F + K +K+ + ++ G PN + D + S
Sbjct: 512 VVKERCQAPLGKVKALFPLKEVSKKKEEKTAQDIFKDNEDG---PNPKKPKIEDEEGSFS 568
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 611
+ +V +G + P +DF ++ +++ ++ D + + + N+I LEN Y K
Sbjct: 569 IMKLAEGSVTSVGSVNPAEDFRILVRQKNT-NFKDVS-QQLINRIHQFLENKGSQY-YMK 625
Query: 612 AVELLVALRKGCI 624
+ + R+ I
Sbjct: 626 GINCIRVFREEAI 638
>gi|149015962|gb|EDL75243.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_a [Rattus norvegicus]
Length = 732
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 161/688 (23%), Positives = 296/688 (43%), Gaps = 112/688 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVST 147
GKKH+ + TD +C LK + G ED S+
Sbjct: 125 KKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSSISLQFFLPFPIDKNGEPGETEDHDSS 184
Query: 148 IARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
+F GL + ++V R LS E D L I+S S + L +
Sbjct: 185 FDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCIF 237
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + I++ YK +EKF K S
Sbjct: 238 KKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + + +
Sbjct: 344 GFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ F S K P E Q A D+L+
Sbjct: 403 PQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ L + E + +L PNP +R Y L ++ H PP+ + + +P
Sbjct: 459 DSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDP 518
Query: 493 DPTLLAESQSAI----------------DAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 536
+ A+ + + D Q V ++N + + +++ EK G
Sbjct: 519 PTEMKAKCEIPLSKVKTLFPLTEVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGH-- 576
Query: 537 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 596
S+ S V K+G + P+++F ++ R+ + + +++ M + I
Sbjct: 577 -------------ISISSLAEGNVTKVGSVNPVENFRVLV-RQKIASFEEASLQLMSH-I 621
Query: 597 FGLLENSNEGINYPKAVELLVALRKGCI 624
L ++NE + + K+++ + ALR+ I
Sbjct: 622 EQFL-DTNETLYFMKSMDCIKALREEAI 648
>gi|154301924|ref|XP_001551373.1| hypothetical protein BC1G_10199 [Botryotinia fuckeliana B05.10]
Length = 864
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 159/629 (25%), Positives = 274/629 (43%), Gaps = 70/629 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ AIVV ++M+ K K G+ K + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 209 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 255
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 256 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 374 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQ 475
P+ + A V +DL+ +GK + +P E T +P L R + ++
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEPAEYMAIEDTYSPVLHRISQAIRRRAVKP 516
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
D PP D L K + P L+ +S I+ +K+ P + K+ R KP
Sbjct: 517 DEGIPPPPDVLTKWSHPPTELVEKSSGQIEKLIRIADVKKVPAITKAKRNREVVKPI--- 573
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
S D +A+ E + +TV+ I +F+ +S D D V K +M +
Sbjct: 574 ------SGLDVEALLGREKRQKITVE-----NAIPEFKRALSSTDSTDSVVKVTREMGDT 622
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCI 624
+ LL+ S + +A E L +R I
Sbjct: 623 VRTLLKRSTGDSTWGQAGEYLRTMRTELI 651
>gi|281340246|gb|EFB15830.1| hypothetical protein PANDA_001572 [Ailuropoda melanoleuca]
Length = 680
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 161/674 (23%), Positives = 291/674 (43%), Gaps = 90/674 (13%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV P+M + L E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFGTDGTENAL 61
Query: 60 TKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
GG Y+++ V + + + D L++ ++ Q + DFLDA+VV +DM+ ++
Sbjct: 62 ----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMDMIQRETVG 117
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------VRA 166
KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 118 KKFEKKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGD 170
Query: 167 SLSGEPH---------MRVIIEN------------------DNLLNIFSKKSSAKTLFVD 199
G H ++ I E D L I+S S + L V
Sbjct: 171 RGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFSESLRQLCVF 230
Query: 200 STTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+TR + P T L + + I + YK +E+ K S
Sbjct: 231 KKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----KKSWTVVDAQ 275
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K +
Sbjct: 276 TLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKSEGKCFSV 335
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VA+VR V+ + +
Sbjct: 336 LGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVVRYVYDR-RA 394
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VG+ P + + + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 395 NPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDAL 450
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + L + E +L PNP +R + L ++ H PP+ + + +
Sbjct: 451 IDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLD 510
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDGSVSDAQAVN 550
P + A+ Q + F + E K K + T + + + + + +A
Sbjct: 511 PPTEVTAKCQIPLSKIKTAFPLTEAIKKKDQVTAQNIFQDNHEEGPTSKKLKTEEREACF 570
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 610
S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE +
Sbjct: 571 SISSLAEGSVTSVGSVNPAENFRVLVRQKKAT--FEEASRQLINCIEQFL-DTNETPYFM 627
Query: 611 KAVELLVALRKGCI 624
K+++ + RK I
Sbjct: 628 KSMDCITVFRKEAI 641
>gi|347836338|emb|CCD50910.1| similar to ATP-dependent DNA helicase II subunit 2 [Botryotinia
fuckeliana]
Length = 724
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 159/629 (25%), Positives = 274/629 (43%), Gaps = 70/629 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ AIVV ++M+ K K G+ K + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 209 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 255
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 256 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 374 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQ 475
P+ + A V +DL+ +GK + +P E T +P L R + ++
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEPAEYMAIEDTYSPVLHRISQAIRRRAVKP 516
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
D PP D L K + P L+ +S I+ +K+ P + K+ R KP
Sbjct: 517 DEGIPPPPDVLTKWSHPPTELVEKSSGQIEKLIRIADVKKVPAITKAKRNREVVKPI--- 573
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
S D +A+ E + +TV+ I +F+ +S D D V K +M +
Sbjct: 574 ------SGLDVEALLGREKRQKITVE-----NAIPEFKRALSSTDSTDSVVKVTREMGDT 622
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCI 624
+ LL+ S + +A E L +R I
Sbjct: 623 VRTLLKRSTGDSTWGQAGEYLRTMRTELI 651
>gi|427788949|gb|JAA59926.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 687
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 156/633 (24%), Positives = 278/633 (43%), Gaps = 77/633 (12%)
Query: 27 KLCSRL-IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQS 85
K C+ L IQ+++ EV V++ G+E T N L+ + Y+++ VL ++ V +++
Sbjct: 16 KTCAELMIQRRIFSESKDEVAVVICGSERTNNSLSSD-DEYQNIDVLCGLQPVSFDMLEK 74
Query: 86 LKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQV 145
L + DF+DAIVV +D ++ K + + L+++ KD Q
Sbjct: 75 LAEVEATKHVCDFVDAIVVALDTIVDKTKNLKFSSRRVVLLSNLGGTFKD-------SQQ 127
Query: 146 STIARQM--------VAFGLRMKNI---VVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
S IA M + ++NI + + S S + ++ + I +
Sbjct: 128 SIIAEGMKNSELSLTIVCPFDVQNIGDDLGKLSASQQKAVKYV------GRILEAVNGDS 181
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
F + +L K R + T + +LE+ + I + Y K E K K+ K
Sbjct: 182 YTFSQAMPALMSYEKKR--TRPTPWNANLEIGPDISIPISSYIKVVEVKPKPWKQCVAKR 239
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKP 311
P T V+ D Y ++ V + I YRYG +VP + A E K
Sbjct: 240 P------TVPVRCDTVYYRNDEKESEVEKDGTIPAYRYGSTLVPFTDENRAAMEGSKAGS 293
Query: 312 EKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+ +++LGFTD +NI RHYYM D + +A G+ A A+SAL +A+++ VAIVR
Sbjct: 294 GRGLQVLGFTDEANIKRHYYMGDKTSYVVARKGDESAGAALSALIQALRKSKMVAIVRYS 353
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PN 426
+ + + +G L+P + E+ + F LP+ ED+R F F P+ P
Sbjct: 354 F-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNIPT 404
Query: 427 EQQQEAADNLVKMLDLAP----SGKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPP 481
+ Q D+L+ +DL E+ + T NP L+R Y ++ ++ H +D PP
Sbjct: 405 DTQLSLFDDLIAAMDLTAVDIDGEPEELFKSSQTSNPYLQRLYQCIQHRAMHPKDPLPPT 464
Query: 482 ---LDDSLKKITEPDPTLLAE-SQSAIDAFCGQFVIKENPKLKKSTRRFL------REKP 531
+ D++K P ++E ++ + F ++E +K + ++
Sbjct: 465 PQYIADAIKT-----PKAVSELAEPVLKKIAAAFPLEEVSPVKAPQDNGVGPSDQNKDHV 519
Query: 532 SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 591
S SDEP + +D SM K+ + P++DF+ ++S +D + E
Sbjct: 520 SNSDEPASKRARTDV----SMAELVATATTKVDVVNPVEDFKKLVSGKD--HSYSEVCEQ 573
Query: 592 MKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ I L +++ + KAV+ L A R+ +
Sbjct: 574 LEEVILKLFKDALGRAAHGKAVQCLRAYRESAL 606
>gi|41056215|ref|NP_803154.1| X-ray repair cross-complementing protein 5 [Rattus norvegicus]
gi|38181957|gb|AAH61576.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Rattus norvegicus]
Length = 732
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 161/688 (23%), Positives = 296/688 (43%), Gaps = 112/688 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVST 147
GKKH+ + TD +C LK + G ED S+
Sbjct: 125 KKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSGISLQFFLPFPIDKNGEPGETEDHDSS 184
Query: 148 IARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
+F GL + ++V R LS E D L I+S S + L +
Sbjct: 185 FDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCIF 237
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + I++ YK +EKF K S
Sbjct: 238 KKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDART 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + + +
Sbjct: 344 GFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P + + + + LPF ED+R++ F S K P E Q A D+L+
Sbjct: 403 PQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLI 458
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ L + E + +L PNP +R Y L ++ H PP+ + + +P
Sbjct: 459 DSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDP 518
Query: 493 DPTLLAESQSAI----------------DAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 536
+ A+ + + D Q V ++N + + +++ EK G
Sbjct: 519 PTEMKAKCEIPLSKVKTLFPLTEVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGH-- 576
Query: 537 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 596
S+ S V K+G + P+++F ++ R+ + + +++ M + I
Sbjct: 577 -------------ISISSLAEGNVTKVGSVNPVENFRVLV-RQKIASFEEASLQLMSH-I 621
Query: 597 FGLLENSNEGINYPKAVELLVALRKGCI 624
L ++NE + + K+++ + ALR+ I
Sbjct: 622 EQFL-DTNETLYFMKSMDRIKALREEAI 648
>gi|291392199|ref|XP_002712509.1| PREDICTED: ATP-dependent DNA helicase II [Oryctolagus cuniculus]
Length = 733
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 157/678 (23%), Positives = 291/678 (42%), Gaps = 84/678 (12%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARFWNKAAVVLCMDVGFAMGNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T++T+N L + Y+++ V + + + D L++ + Q G+ DFLDA++V +D++
Sbjct: 61 TDDTKNALA-DGDQYQNITVHRHLMLPDFDLLEDIDSKIQLGSQQADFLDALIVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK---------- 160
++ K+H+ + TD P +DQ+ I + G+ ++
Sbjct: 120 RETVGKRFEKRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGKE 172
Query: 161 ---------NIVVRASLSGEP----------------HMRVIIEN-DNLLNIFSKKSSAK 194
N+ + S P M V +E D L I+S S +
Sbjct: 173 DGTGDRGDGNLPLYHHGSSFPPKGITEQQKEGIQMVKMMMVSLEGEDGLDEIYSFSESLR 232
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
L V R + L + + IK+ YK +EK D
Sbjct: 233 QLCVFKKIEKRSMP----------WPCQLTIGSNLSIKIVAYKSIVQEKVKKTWTVVD-- 280
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-K 313
+++ + Y +D VP E ++G+RYG +VP S + E +K+K E K
Sbjct: 281 --ARTLKKEDIQKETVYCLNDDDETEVPKEDTLQGFRYGSDIVPFSKVDEEQMKYKSEGK 338
Query: 314 SVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+LGF +S + R ++M V A + A VA+S+L A+ E++ VAIVR +
Sbjct: 339 CFSVLGFCRSSQVQRKFFMGYQVLKVFAAKDDEAAAVALSSLVHALDELDMVAIVRYAYD 398
Query: 373 QGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ + + VGV P + + + + LPF ED+R++ F S K + P E Q A
Sbjct: 399 R-RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKFTPTEAQLNA 453
Query: 433 ADNLVKMLDLAPSGKGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 487
D L+ + L + E + Q PNP +R + L ++ H PP+ +
Sbjct: 454 VDALIDSMSLVKKDEEEGTVEDLFQTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHIL 513
Query: 488 KITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQ 547
+ +P + A+SQ+ + F + E K K K + + P ++ +
Sbjct: 514 NMLDPPAEVTAKSQTPLSKIKSLFPLTEAIKRKDQVTAQDIFKDNHEEGPIAKKCKTEEE 573
Query: 548 AVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEG 606
+ S+ S V +G + P ++F ++ +++ ++A + N I L ++NE
Sbjct: 574 EAHFSVSSLAEGRVTSVGSVNPAENFRVIVRQKNAS--FEEASHQLINHIEQFL-DTNET 630
Query: 607 INYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 PYFMKSIDCIKAFREEAI 648
>gi|344268219|ref|XP_003405959.1| PREDICTED: X-ray repair cross-complementing protein 5 [Loxodonta
africana]
Length = 720
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 163/691 (23%), Positives = 309/691 (44%), Gaps = 110/691 (15%)
Query: 1 MAR--TREALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L DV +M S L +K+ + +Q+++ EV ++LFG
Sbjct: 1 MARPGNKAAVVLCADVGFAMSNSFLDEESSLEQAKKVMTMFVQRQVFAESKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L +E Y+++ V + + + D L++ ++ Q G+ D LDA+VV +D++
Sbjct: 61 TDGTDNALAQE-NQYQNITVHRHLMLPDFDLLEDIESKIQPGSKHADILDALVVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLS 169
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ + S+
Sbjct: 120 QETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKQSGISLQ-FFLPFSVG 170
Query: 170 GE------------------------------------PHMRVIIENDNLLN-IFSKKSS 192
GE M + +E D+ L+ I+S S
Sbjct: 171 GEDGTGDRGDGSLRLGHHGPSFPQKGITEQQKEGIQVVKRMMMSLEGDSGLDEIYSFSES 230
Query: 193 AKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSD 252
+ L V R + L + + IK+ YK +E T+KK +
Sbjct: 231 LRQLCVFKKIERRSMP----------WHCQLTVGSNLAIKIVAYKSIQQE---TIKK-TW 276
Query: 253 KAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
+++ + Y +D VP E I+G+RYG +VP S + E +K++ E
Sbjct: 277 AVVDARTLKKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYRSE 336
Query: 313 -KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K +LGF + + R ++M + L + AE + A VA+S+L A+ E++ VA+VR
Sbjct: 337 GKCFSVLGFCRSPQVQRRFFMGNQVLKVFAEKDDEAAAVALSSLIHALDELDMVAVVRYA 396
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
+ + + + VGV P++ + + + LPF ED+R++ F S K + P E Q
Sbjct: 397 YDK-KANPQVGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQL 451
Query: 431 EAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDS 485
A D L+ + L + E +L PNP +RF+ L ++ H PP+
Sbjct: 452 NAVDALIDSMSLVKKDEEEDTIEDLFPTTKIPNPQFQRFFQCLLHRALHPQEPLPPIQQH 511
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD---EPNGDGS 542
+ + +P + A+SQ + F + E +KK R++ + D + +GS
Sbjct: 512 ILNMLDPPTEVTAKSQIPLSEIKTLFPLTE--AIKK------RDQITAQDIFQDNQEEGS 563
Query: 543 VS------DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 596
VS +A S+ S V +G + P ++F ++ +++ + ++ +++
Sbjct: 564 VSKKCKTEEADIPFSITSMAEGRVTSVGSVNPAENFRVLVRQKNA------SFGEVSHQL 617
Query: 597 FGLLE---NSNEGINYPKAVELLVALRKGCI 624
+E +SNE + K+++ + A R+ I
Sbjct: 618 ISHIEQFLDSNETPYFMKSMDCIKAFREEAI 648
>gi|1110531|gb|AAC52664.1| autoantigen Ku86 [Mesocricetus auratus]
Length = 732
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 160/684 (23%), Positives = 293/684 (42%), Gaps = 104/684 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TE
Sbjct: 6 NKAAVVLCMDVGIAMGNSFPGEESPFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDSTE 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L E Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 66 NALASE-DQYQNITVRRHLMLPDFDLLEDIESKIQLGSRQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPL----------------------------KDPDVGTKEDQVST 147
GKKH+ + TD P K+ + G D
Sbjct: 125 KKFGKKHIEVFTDLSSPFSQDQLDVIICNLKKSGISLQFFLPFPISKNNETGHSGDGDLG 184
Query: 148 IARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL 196
+ + +F G+RM V+ SL GE D L I+S S + L
Sbjct: 185 LDHRGPSFPQKGVTEQQKEGIRMVERVM-VSLEGE---------DGLDEIYSFSESLRQL 234
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
V R + L + + IK+ YK +EK D
Sbjct: 235 CVFKKIERRSMP----------WPCQLTIGPDLSIKIVAYKSIVQEKLKKTWVVVD---- 280
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K
Sbjct: 281 ARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCF 340
Query: 316 KLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + +
Sbjct: 341 SVLGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYTYDK- 399
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ + VGV P + + + + LPF ED+R++ F S K P E Q A D
Sbjct: 400 RANPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAID 455
Query: 435 NLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
+L++ + L + E +L PNP +RF+ L + H PP+ + +
Sbjct: 456 DLIESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPIQQHILNM 515
Query: 490 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV 549
+P + A+ + + F + E +KK + ++ +DE +G + +
Sbjct: 516 LDPPTEVKAKCEIPLSKVRTLFPLTE--AVKKKDQVTAQDIFQDNDE---EGPAAKKCKM 570
Query: 550 NSMESKPVVT------VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE-- 601
ES ++ V K+G + P+++F ++ ++ + E+ ++ +E
Sbjct: 571 EKEESHISISSLAEGNVTKVGSVNPVENFRVLVRQKIA------SFEEASLQLISHIEQF 624
Query: 602 -NSNEGINYPKAVELLVALRKGCI 624
++NE + + K++E + A R+ I
Sbjct: 625 LDTNETLYFMKSMECIKAFREEAI 648
>gi|426221531|ref|XP_004004963.1| PREDICTED: X-ray repair cross-complementing protein 5 [Ovis aries]
Length = 733
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 158/669 (23%), Positives = 295/669 (44%), Gaps = 66/669 (9%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWNKAAVVLCMDVGLAMSNSFPGEESPFELAKKVITMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L E Y+++ V + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGE-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 165
K+ G+ ++ KKH+ + TD P DQ+ I + G+ ++ +V+
Sbjct: 120 KETLGKKFE-KKHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIVK 171
Query: 166 ASLSGEPHMRVIIENDNL-----LNIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
+G+ ++ +D+ I ++ + SL G +I
Sbjct: 172 KGGTGDRGDGSLLLDDHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ +F+ L + + IK+ YK +EK K S
Sbjct: 232 RQLCVFKKMERHSMPWSCQLTIGSNLSIKIVAYKSITQEKV----KKSWTVVDARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG ++P S + E +K++ E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYRSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + Y+M + L + A + A VA+S+L A+ E++ VA+VR + Q + + VG
Sbjct: 348 SSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDQ-RTNPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P + + + + LPF ED+R++ F S K P E Q A D L+ +
Sbjct: 407 VAFPLIKDTY---ECLVYIQLPFMEDLRQYMFSSL-KNNRKCTPTEAQLSAVDALIDSMS 462
Query: 442 LAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
L + E +L PNP +R + L ++ H PP+ + + +P +
Sbjct: 463 LVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPTEV 522
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKS-TRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK 555
A+ Q + F + E K K T + L + + +A S+ S
Sbjct: 523 TAKGQVPVSKIKTLFPLTEVIKKKNQVTGQDLFQDNHEEGPTCKRLKTEEEEARFSVSSL 582
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 615
TV +G + P +F ++ ++ ++A + N I L ++NE + + K+++
Sbjct: 583 AEGTVTCVGSVNPADNFRVLVRQKKAS--FEEASHQLINHIEQFL-DTNETLYFMKSMDC 639
Query: 616 LVALRKGCI 624
+ A R+ I
Sbjct: 640 IKAFREEAI 648
>gi|335303363|ref|XP_003133697.2| PREDICTED: X-ray repair cross-complementing protein 5 [Sus scrofa]
Length = 733
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 155/672 (23%), Positives = 302/672 (44%), Gaps = 72/672 (10%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGNKAAVVLCVDVGFAMSNSFPGEESPFELAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ TEN L + Y+++ V + +K+ D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLKLPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 165
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ V +
Sbjct: 120 QETIGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPVGK 171
Query: 166 ASLSGEPHMRVIIENDN-----LLNIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
+G+ + + + L I ++ + SL G +I
Sbjct: 172 EDGTGDRGDSSLRPDHHGPSFPLKGITEQQKEGIQMVKKVMMSLEGEDGLDEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ IF+ L + + I++ YK +EK K S A
Sbjct: 232 RQLCIFKKIEKHSMPWPCQLTIGSNLSIRIVAYKSILQEKV----KQSWTAVDARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 288 DIRKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR + + + + VG
Sbjct: 348 SSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDK-KANPQVG 406
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P + + + + LPF ED+R++ F S K P E Q A D+L+ +
Sbjct: 407 VAFPYIKDAY---ECLVYIQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAVDSLIDSMC 462
Query: 442 LA----PSGKGEILQPEL-TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
L G E L P + PNP +R + L ++ H PP+ + + +P +
Sbjct: 463 LVKKDEEEGTVEDLFPTVKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEV 522
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMESK 555
A+ Q + F + E K K + + + P+ + +A + S
Sbjct: 523 TAKCQIPLSKIKTLFPLTEVIKKKDQVTAQDIFQDNHEEAPSSKKLKTEEEEAHFRISSL 582
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKA 612
+V ++G +TP ++F ++ ++ + E+ +++ +E ++NE + K+
Sbjct: 583 AEGSVTRVGSVTPAENFRVLVRQKKA------SFEEASHQLISHIEQFLDTNETPYFMKS 636
Query: 613 VELLVALRKGCI 624
++ + R+ I
Sbjct: 637 MDCIKVFREEAI 648
>gi|156371370|ref|XP_001628737.1| predicted protein [Nematostella vectensis]
gi|156215721|gb|EDO36674.1| predicted protein [Nematostella vectensis]
Length = 483
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 177/358 (49%), Gaps = 31/358 (8%)
Query: 241 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
EEK + KK S A ++ + EV ++ Y ++ + E +GYRYG +VP++
Sbjct: 65 EEKLASWKKLSAIAQASPNSDSMEVTMERTYHRNDEDQTEIEKENVAQGYRYGKTIVPLT 124
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMK 359
+ E +K + EK + +LGF+ NI RH+Y+ ++V F A+P + A++A+SA AM
Sbjct: 125 KIDKEGMKLETEKCLSVLGFSHKDNIKRHHYIGENVTAFTAQPEDEHASIALSAFINAMH 184
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 419
+ VAIVR +R+ + +G L+P++ E+ + F LPFAED+R F F S
Sbjct: 185 RSDTVAIVRYCFRK-NAAPKLGFLSPHIKEEY---ECLLFTALPFAEDLRHFSFASLDGN 240
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLELKSE 473
QP E Q A D+L+ ++DL+ + + E L+P+ T NP +R + ++ ++
Sbjct: 241 K-KLQPTEDQLRAIDDLITVMDLSKAQRDEYGEATEALKPKCTFNPTRQRVFQCIQHRAL 299
Query: 474 H-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS 532
H D + P L+ ++ EP AE S + C +K+ L+K R+ +E +
Sbjct: 300 HPNDPSLPSLEPAIASYLEPS----AEFLSVREPQC--LRVKDYFPLEKVERKKAKESAA 353
Query: 533 GSDEPNGDGSVSDAQAVN------------SMESKPVVTVDKIGDLTPIQDFEAMMSR 578
+ N D D A SM TV ++G + P+ DF ++ R
Sbjct: 354 EIFKSNVDQHKLDEPAQKRAWLEPGDEVDFSMAGLAKGTVTEVGTVDPVSDFLTIIGR 411
>gi|345797322|ref|XP_536061.3| PREDICTED: X-ray repair cross-complementing protein 5 [Canis lupus
familiaris]
Length = 829
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 154/681 (22%), Positives = 293/681 (43%), Gaps = 94/681 (13%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEE 54
+R++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 100 SRSKAAVVLCMDVGSAMGNSFPGEESPFELAKKVITMFVQRQVFAESRDEIALVLFGTDG 159
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK- 112
TEN L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 160 TENALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQET 218
Query: 113 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVRASL 168
G+ ++ K+H+ + TD P +DQ+ I + FG+ ++ + +
Sbjct: 219 VGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPIGKEDG 270
Query: 169 SGEPH--------------------------------MRVIIENDNLLNIFSKKSSAKTL 196
+G+P MR + D L I+S S + L
Sbjct: 271 TGDPGDGNSRSDHQGSSFPLKGITEQQKEGIRMVKKVMRSLEGEDGLDEIYSFSESLRQL 330
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
V + K P T L + + IK+ YK +EK K
Sbjct: 331 CV-----FKKIEKHSIPWPCT-----LTIGSSLSIKIVAYKSIIQEKV----KKGWTVVD 376
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K
Sbjct: 377 ARTLKKEDLQKETVYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKLEGKCF 436
Query: 316 KLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF +S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR + +
Sbjct: 437 SVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDR- 495
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ VG+ P + ++ + + LPF ED+R++ F SF K P E Q A D
Sbjct: 496 RSHPQVGMAFPFIK---DVYECLIYVQLPFMEDLRQYMFSSF-KNNKKCTPTEAQLSAVD 551
Query: 435 NLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
L+ + L + + +L PNP +R + L ++ H PP+ + +
Sbjct: 552 ALIDSMSLIKKDEKDDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQPHILSM 611
Query: 490 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR---FLREKPSGSDEPNGDGSVSDA 546
+P + + Q + F + E K K F G D + +
Sbjct: 612 LDPPTEVTTKCQVPLSKIKTIFPLTEVIKKKDQVTAQDIFQDNHEEGPD--SKKLKTEEG 669
Query: 547 QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NS 603
+ S+ S +V +G + P ++F ++ ++ E+ ++ +E ++
Sbjct: 670 EPCFSISSLAEGSVTSVGSVNPAENFRVLVRQKKA------TFEEASCQLISRIEQFLDT 723
Query: 604 NEGINYPKAVELLVALRKGCI 624
NE + K+++ + R+ I
Sbjct: 724 NETPYFMKSMDCITVFRQEAI 744
>gi|367027154|ref|XP_003662861.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
gi|347010130|gb|AEO57616.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
Length = 721
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 159/641 (24%), Positives = 277/641 (43%), Gaps = 81/641 (12%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGD 97
K VGV+ TEET N E + GYEH+ VLQ I + ++ L+ L T GD
Sbjct: 49 KTWTVGVVGLNTEETVNAQHSEGLEGYEHISVLQGIGPMTMSSLRDLRSMILSSRTHGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ AIVV + M I+ + + K + + L+T+ P+ D ++++ + ++V G+
Sbjct: 109 AISAIVVALTM-IEDFTKKLKYNRKIILVTNGESPIDDESSEEVANRLNELNVELVVVGV 167
Query: 158 RMKNI--------VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ R + E +R ++E N + + + + L + +
Sbjct: 168 DFDDPDYGYKEEDKSRGKANNEKILRKLVEQCNSGVFGTMQQAVEELAIP---------R 218
Query: 210 TRDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKY----------SDK 253
+ + P + G L L + K I V Y KT PT +
Sbjct: 219 IKPVRPFKAYDGPLTLGDPQKYQSALSIHVERYFKTKRAVPPTASTVVTNPERGGPSQPQ 278
Query: 254 APSTD------KFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSA 302
AP D +F+ + Y +V+DP + V E+ KGY+YG VVP S +
Sbjct: 279 APGEDIVMGGTEFSGVKHMRTY---TVDDPDAPGGKRDVDFEELAKGYQYGRTVVPFSES 335
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
++ K + +KS ++GF S+ + M + + +A+ N A + +SAL A+ E+
Sbjct: 336 DFSVTKLETKKSFTIIGFIPFSSYSQFINMGETGVVVAQKHNEEAELGLSALIHALHELE 395
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
A+ R V + G Q ++ +L PN + + + + Y LPFAEDVR +QFP K V
Sbjct: 396 SYAVARYVQKDGTQPQIL-LLKPNPALEDDF-ECLYDVPLPFAEDVRSYQFPPLDKVLTV 453
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHH 467
+ P+E ++A + V +DL E +P E P NP + R
Sbjct: 454 TGNVIKEHRLLPSEDLKQAMSDFVDAMDLTGFDVDEEGKPVEYAPIDELYNPVIHRLNQA 513
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ D+ P + L + ++P LL ++++ IDA +K+ P K RR
Sbjct: 514 IRARAVDPDSPIGPPAEILLRFSKPPEKLLDKAKAEIDALIDAAEVKKVPA-KAQGRR-- 570
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
G EP S D A+ + ++ D + +F+ +++ ++
Sbjct: 571 -----GRKEPVKPLSGLDIDALLGENKRTTISSD-----NAVPEFKQILATASDDATIES 620
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQV 628
A + M I L+ +S G+NY +A E L +R+ I +V
Sbjct: 621 AAKQMGEIIRKLIRDSFAGLNYARAAENLRVMREELIALEV 661
>gi|310791671|gb|EFQ27198.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Glomerella graminicola M1.001]
Length = 732
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 157/639 (24%), Positives = 266/639 (41%), Gaps = 77/639 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ET N + + GYE++ VLQ++ + ++ LK P T GD
Sbjct: 49 KTWTVGVVGLKTDETRNAMQDD-EGYENISVLQELGPMTMTSLRELKEAIKPSETANGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+V+ VDM I+ + + K K+ + L+TD L P+ DV +++ +++ G+
Sbjct: 108 VSAVVIAVDM-IEAFTKKLKYKRRIYLVTDGLAPIDGDDVDAIAKKINQDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +P ++ E L+++ SK +A+ + + + + P
Sbjct: 167 FDDADYGFKEEDKPSIKKKNEG-ILMDLVSKCDNAQFATIAEAIDELDTPRLKPVRPYKT 225
Query: 219 FRGDLELS------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD----KFAT 262
+ G L L + I V Y KT + K PT A D T
Sbjct: 226 YDGPLTLGLADPPPELKIPPTPVVINVERYFKTKQAKPPTASTVVVSAAGQDAASQSMQT 285
Query: 263 HE---------------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSA 302
E VK YK + DP + V E KGY YG V IS +
Sbjct: 286 AEGDPMEGVESIAGFAAVKSARTYK-INDPDAPGGKRDVEFESLAKGYEYGRTAVAISES 344
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
EW K K KS ++GF M + + + + ++ +A+S+L A+ E+
Sbjct: 345 EWNVTKLKTVKSFSIIGFIPCEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYELE 404
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP + V
Sbjct: 405 SYAVARLVVKDNKDPVLV-LLAPCIEPDM---ECLYDVPLPFAEDVRGYQFPPLDRVITV 460
Query: 422 SWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYH 466
S Q P ++ +A + V +DL+ + P E T NP + R
Sbjct: 461 SGQNITADHRLLPGDELTDAMSDYVDSMDLSSFSADDEGNPSEYAAIEDTYNPIIHRINQ 520
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
+ ++ + + A P+ L + P L+ +++S I+ +K+ P K R++
Sbjct: 521 AIRQRAVNPEGAIDPIPPILVRYAAPPADLVEKAKSQIETLISAAQVKKVPPKAKGKRKY 580
Query: 527 LREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWV 585
KP SG D DA + + +P KI I +F+ ++ + D +
Sbjct: 581 EGTKPLSGLD--------VDA-LLGTQPKRP-----KISAENAIPEFKRALAVAEEVDAI 626
Query: 586 DKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
A M + + L+ +S NY +A E L LR G +
Sbjct: 627 RDAARQMGDIVAQLITDSFGDANYARATENLSVLRGGLV 665
>gi|320164326|gb|EFW41225.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 699
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 185/397 (46%), Gaps = 57/397 (14%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
EV+ + Y ED V E + Y+YG +P SS + +K K + +LGFT A
Sbjct: 247 EVRRETSYFLQEDEETEVQKEDITRAYKYGKDFIPWSSVDESTMKLSSHKCLSVLGFTAA 306
Query: 324 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
SNI R M + +PG++ A+ A+SA A+AM VAIVR V+R+ +V +G L
Sbjct: 307 SNIPRQLLMGGAVAVVPQPGDAVASKALSAFAQAMVLQKSVAIVRYVFREN-ANVRLGCL 365
Query: 384 TPNVSEKINIPDSFY--FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
P +S + FY +N LPFAED+RE+ F + + + P+ +Q + D L+ LD
Sbjct: 366 HPVIS-----AEHFYLLYNSLPFAEDMREYPFTTLHQ--KRYMPSAEQLKVVDGLIDKLD 418
Query: 442 LAPS------GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
L + + L P+L+ NP L+R Y ++ ++ H D PPLD ++K P
Sbjct: 419 LTMAYHDQEGNAMDALHPKLSFNPVLQRVYQCVKQRALHPDDDIPPLDPLIEKYVNPSQD 478
Query: 496 LLAESQSAID----AFCGQFVIK----ENPKL--------------------KKSTRRFL 527
+ A +Q+ +D AF Q + + E KL + ++
Sbjct: 479 IFARAQAELDRVRQAFPLQVIERKEKDEAVKLWNEADAPVLNVDPVDLLGGASHAAKKVK 538
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
E P G+ P S+S Q V ++G + PI+DF M+S + D V
Sbjct: 539 LENPDGNAGPVTLDSLSSGQ------------VMEVGSIDPIKDFRTMVSSK-TRDLVST 585
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
A+ MK +I L+ S + KA + L LR C+
Sbjct: 586 AVAQMKKRIIQLITESFGSNLFQKAFDCLKVLRIECV 622
>gi|53586|emb|CAA46999.1| p80 Ku autoantigen [Mus musculus]
Length = 732
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 155/683 (22%), Positives = 296/683 (43%), Gaps = 102/683 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P E K+ + +Q+++ E+ + L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSIPGEESPIEQAKKVMTMFVQRQVFSESKDEIALALYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
L+ + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 MPLSGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHM 174
GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKFGKKHIEVFTDLRSPF-------SKDQLDVIICNLKKCGISLQFFLPFPIDKNGEPGE 177
Query: 175 RVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTIF 219
R +++ D+L F +K + + SL G +I + +F
Sbjct: 178 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 237
Query: 220 RG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ L + + IK+ YK +EKF K S +++ +
Sbjct: 238 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 293
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILR 328
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S + R
Sbjct: 294 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 353
Query: 329 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTP 385
++M V A + A VA+S+L A+ E+N VAIVR + R Q V +
Sbjct: 354 RFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVASLYIK 413
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 445
+ E++ + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 414 DAYERL------VYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKK 466
Query: 446 GKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP-------- 492
+ E + +L PNP +R Y L ++ H PP+ + I +P
Sbjct: 467 NEEEDIVEDLFPASKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNIWDPPTEMKQKC 526
Query: 493 -DPTL-------LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVS 544
P L L E + Q V ++N + + +++ EK
Sbjct: 527 ESPPLKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKE------------E 574
Query: 545 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE--- 601
D +++S+ + K+G + P+++F ++ ++ + E+ ++ +E
Sbjct: 575 DHISISSLAEG---NITKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFL 625
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
++NE + + K+++ + A R+ I
Sbjct: 626 DTNETLYFMKSMDCIKAFREEAI 648
>gi|440905725|gb|ELR56072.1| X-ray repair cross-complementing protein 5, partial [Bos grunniens
mutus]
Length = 705
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 158/671 (23%), Positives = 288/671 (42%), Gaps = 84/671 (12%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + PD E K+ + +Q+++ EV ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGLAMSNSFPDEESPFELAKKVMTMFVQRQVFAENKDEVALVLFGTDGTENAL 61
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
Y+++ V + + D L++ ++ Q G+ D LDA++V +D++ ++ G+ +
Sbjct: 62 AAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQEETLGKKF 120
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-------------V 164
+ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 121 E-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGKQGGTGDRG 172
Query: 165 RASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDST 201
SL + H M + D L I+S + + L V
Sbjct: 173 DGSLLSDHHGPSFPPKGITKQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEALRQLCVFKK 232
Query: 202 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
T R + L + + IK+ YK +EK D A + K A
Sbjct: 233 TERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD-ARTLKKEA 281
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 320
+ V Y +D V E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 282 IQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGF 338
Query: 321 TDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
+S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 339 CRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVYNE-KTNPQ 397
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
VGV P + + + + LPF ED+R++ FPS K P E Q A D L+
Sbjct: 398 VGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLSAVDALIDS 453
Query: 440 LDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
+ L + E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 454 MSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPT 513
Query: 495 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSME 553
+ A+ Q + F + E K K + + + P + +A S+
Sbjct: 514 EVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEEEEAHFSVS 573
Query: 554 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 613
S +V +G + P ++F ++ ++ ++A + N I L ++NE + + K++
Sbjct: 574 SLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNETLYFMKSM 630
Query: 614 ELLVALRKGCI 624
+ + A R+ I
Sbjct: 631 DCIKAFREEAI 641
>gi|432103389|gb|ELK30494.1| X-ray repair cross-complementing protein 5 [Myotis davidii]
Length = 763
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 153/617 (24%), Positives = 266/617 (43%), Gaps = 86/617 (13%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 16 AVVLCMDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFGTDGTENAL 75
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
E Y+++ V + + + D +L++ ++ Q G+ DFLDA++V +D++ ++ G+ +
Sbjct: 76 ACE-DQYQNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALIVCMDVIQQETVGKKF 134
Query: 118 KGKKHLCLITDALCPL----------------------------KDPDVGTKEDQVSTIA 149
+ K+H+ + TD P K+ G + D +
Sbjct: 135 E-KRHIEVFTDLSSPFSKDQLDTIIHNLKKSNISLQFFLPFPIGKEDGTGDRGDGNLPLD 193
Query: 150 RQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+F G+RM V+ SL GE D L I+S S + L V
Sbjct: 194 NHGPSFPLKGITEQQKEGIRMVKRVM-MSLEGE---------DGLDEIYSFSESLRQLCV 243
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
T R P + L + + IK+ YK +EK K S
Sbjct: 244 FKKTE-------RSSMP---WPCQLTIGSNLSIKILAYKSVLQEKV----KKSWIVVDAR 289
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+V+ + Y +D VP E I+G+RYG ++P S + E +K+K E K +
Sbjct: 290 TLKKEDVQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 349
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R Y+M + L + A + A VA+S+L A+ E+ VAIVR + + +
Sbjct: 350 LGFCRSSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAIVRYAYDR-RS 408
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 409 NPQVGVAFPHIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAL 464
Query: 437 VKMLDLAPSG-KGEILQPEL----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + L +G+ ++ PNP +R + L ++ H PP+ + + +
Sbjct: 465 IDSMSLVKKDEEGDTIEDLFPTTKIPNPQFQRLFQCLLHRALHPQEPLPPVQQHVLNMLD 524
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 551
P + A +S + F + E K K + + PN ++ +A S
Sbjct: 525 PPTEVTANCESPLSKIKTLFPLTEAIKKKDQLTAQDVFQDKHEEGPNSKKLKTEEEAQFS 584
Query: 552 MESKPVVTVDKIGDLTP 568
+ S TV K+ P
Sbjct: 585 LSSLAEGTVTKVSRTFP 601
>gi|336273738|ref|XP_003351623.1| hypothetical protein SMAC_00164 [Sordaria macrospora k-hell]
gi|380095902|emb|CCC05949.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 724
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 157/636 (24%), Positives = 274/636 (43%), Gaps = 68/636 (10%)
Query: 41 KNHEVGVILFGTEETEN-ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ T+ET+N E +E GYE++ VLQ++ + +++LK P T + D
Sbjct: 49 KTWNVGVVGLNTDETDNNENREEYQGYENISVLQELGPMSMTSLRALKSQIEPSETSSAD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ AIVV + M I+ Y + K K+ + L+T+ P+ D ++ + ++V G+
Sbjct: 109 AISAIVVALRM-IQVYTKKLKYKRKIILVTNGESPIDDDQSEDVAAMLNNVGIELVVIGI 167
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISP 215
+ E + EN+ +L ++ + L R + + P
Sbjct: 168 DFDD--AEYGFKEEDKTQHKAENERILKTLVDLCENGEFGTMAQAVEELAIPR-IKPVRP 224
Query: 216 VTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYS-------------DKAPS 256
+ G L L + K I V Y KT P+ + D
Sbjct: 225 FKAYDGPLTLGDPQKYPSALSIPVERYFKTKRATPPSASNVAIHTGPPQAEVIDEDSGAP 284
Query: 257 TDKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
VK Y+ V+D K + E K Y+YG VVP S++E + VK++
Sbjct: 285 MSGVEFQPVKQLRTYR-VDDAKAAGGKKDIEMEDLAKAYQYGRTVVPFSTSEEDYVKYQT 343
Query: 312 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
KS ++GF S+ M + L +A+ N +A + +SAL A+ E+ A+ R V
Sbjct: 344 TKSFTIIGFVPMSSYEPFINMGETGLIVAQKVNEQAELGLSALIHALHELESYAVARYVN 403
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV---------S 422
+ ++ +L PN + + ++ + Y LPFAEDVR +QFP K
Sbjct: 404 KDKAAPQIL-LLKPNPAIEDDV-ECLYDVPLPFAEDVRSYQFPPLDKVLTITGNVLTEHR 461
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQD 476
PN+ Q+A + V +DL G+ E P E P NP + ++ + +
Sbjct: 462 LLPNDDLQQAMGDYVDAMDLTDFGQDEDGNPAEYAPIDDVYNPVIHHMNQATRNRAVNPE 521
Query: 477 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGS 534
A PP+ D L + T P L+A+++S I+ +K+ PK++ R KP SG
Sbjct: 522 APLPPVADILTRFTHPPEPLIAKAKSEINGLIEAAEVKKVPPKVQGKRGRKDTVKPLSGL 581
Query: 535 DEPNGDGSVSDAQAVNSM--ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 592
D ++++ +++P I I +F+ ++ + + ++ A + M
Sbjct: 582 D-------------IDALLGKTRPRAKKTPISAENAIPEFKQILETAEDDETIETAAKQM 628
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQV 628
+ I L+ +S + YP+A E L +R+ I +V
Sbjct: 629 GDIIRKLISDSFADVLYPRAAENLRVMREELISMEV 664
>gi|296490345|tpg|DAA32458.1| TPA: ATP-dependent DNA helicase II [Bos taurus]
Length = 692
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 159/679 (23%), Positives = 292/679 (43%), Gaps = 86/679 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L Y+++ V + + D L++ ++ Q G+ D LDA++V +D++
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------ 163
++ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 164 -------VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 193
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 432 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
A D L+ + L + E +L PNP +R + L ++ H PP+ +
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHI 512
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSD 545
+ +P + A+ Q + F + E K K + + + P +
Sbjct: 513 LSMLDPPTEVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEE 572
Query: 546 AQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 605
+A S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE
Sbjct: 573 EEAHFSVSSLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNE 629
Query: 606 GINYPKAVELLVALRKGCI 624
+ + K+++ + A R+ I
Sbjct: 630 TLYFMKSMDCIKAFREEAI 648
>gi|18181884|dbj|BAB83859.1| Xrcc5 [Rattus norvegicus]
Length = 683
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 146/616 (23%), Positives = 276/616 (44%), Gaps = 55/616 (8%)
Query: 44 EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI 102
E+ ++L+GT+ T+N L + Y+++ V + + + D L++ + + Q + DFLDA+
Sbjct: 4 EIALVLYGTDGTDNALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDAL 62
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
+V +D++ + GKKH+ + TD P +DQ+ I + G+ ++
Sbjct: 63 IVCMDLIQHETIGKKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFF 115
Query: 163 V-VRASLSGEPHMRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI 213
+ +GEP R +++ D+L F +K + + SL G +I
Sbjct: 116 LPFPIDKNGEPGERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEI 175
Query: 214 -------SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+ IF+ L + + I++ YK +EKF K S
Sbjct: 176 YSFSESLQQLCIFKKIERRSLPWPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVD 231
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 315
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K
Sbjct: 232 ARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCF 291
Query: 316 KLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + +
Sbjct: 292 SVLGFCKSSQVHRRFFMGHQVLKVFATKDDEAAAVALSSLVHALDELNMVAIVRYAYDK- 350
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+ + VGV P + + + + LPF ED+R++ F S K P E Q A D
Sbjct: 351 RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAID 406
Query: 435 NLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
+L+ + L + E + +L PNP +R Y L ++ H PP+ + +
Sbjct: 407 DLIDSMSLVKKNQEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNM 466
Query: 490 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV 549
+P + A+ + + F + E K K + + + P ++ +
Sbjct: 467 LDPPTEMKAKCEIPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNNEEGPAAKKYRTEKEEG 526
Query: 550 N-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
+ S+ S V K+G + P+++F + R+ + + +++ M + I L ++NE +
Sbjct: 527 HISISSLAEGNVTKVGSVNPVENFRVXV-RQKIASFEEASLQLMSH-IEQFL-DTNETLY 583
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + ALR+ I
Sbjct: 584 FMKSMDCIKALREEAI 599
>gi|156120929|ref|NP_001095611.1| X-ray repair cross-complementing protein 5 [Bos taurus]
gi|154426068|gb|AAI51453.1| XRCC5 protein [Bos taurus]
Length = 733
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 159/679 (23%), Positives = 292/679 (43%), Gaps = 86/679 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L Y+++ V + + D L++ ++ Q G+ D LDA++V +D++
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------ 163
++ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 164 -------VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 193
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
K +LGF +S + Y+M + L + A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 432 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
A D L+ + L + E +L PNP +R + L ++ H PP+ +
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHI 512
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSD 545
+ +P + A+ Q + F + E K K + + + P +
Sbjct: 513 LSMLDPPTEVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEE 572
Query: 546 AQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 605
+A S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE
Sbjct: 573 EEAHFSVSSLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNE 629
Query: 606 GINYPKAVELLVALRKGCI 624
+ + K+++ + A R+ I
Sbjct: 630 TLYFMKSMDCIKAFREEAI 648
>gi|395527743|ref|XP_003765999.1| PREDICTED: X-ray repair cross-complementing protein 5 [Sarcophilus
harrisii]
Length = 817
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 152/623 (24%), Positives = 278/623 (44%), Gaps = 67/623 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
T+ A++L LDVS +M P E K+ + +Q+++ EV ++LFGT+ T+
Sbjct: 91 TQAAVVLCLDVSFNMMHSFPGEESSFEQAKKVMTMFLQRQVFAEAKDEVALVLFGTDTTK 150
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N+L Y+++ V + + + D L++ L++ Q GT DFLDA+VV +D++ K+ G
Sbjct: 151 NDLATG-DQYQNITVHRHLMLPDFELLEDLQNSVQPGTRQADFLDALVVCMDVIQKETIG 209
Query: 115 ETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV----AFGLRMKNIVVRASL 168
+ ++ +KH+ + TD PL KD DV + S I+ Q G +S
Sbjct: 210 KKFE-RKHIEVFTDLSSPLSKDQLDVIVNNLKRSDISLQFFLPFPVDGEDGSEDTDDSSF 268
Query: 169 SGEPH----------------------MRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLR 205
E H + +++E ++ LN I+S S + L V R
Sbjct: 269 DSERHKPSLPPKGLTEQQKEGVCVVKNIMMLLEGEDGLNEIYSFSESLRQLSVFKKIERR 328
Query: 206 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
P+ + L + + I++ YK +EK D ++
Sbjct: 329 ---------PMP-WPCQLTIGSNLSIRIVAYKSVTQEKVKKTWTVVD----ARTLRKEDL 374
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDAS 324
+ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S
Sbjct: 375 QKETVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSS 434
Query: 325 NILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
+ R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 435 QVHRKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDQLDMVAIVRYAYDR-RSNPQVGVA 493
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 443
P + + + + LP+ ED+R++ F S + P E Q A D L+ + L
Sbjct: 494 FPFIKQAY---ECLVYIQLPYMEDLRQYLFSSL-RINKKCIPTEAQLSAVDALIDSMSLV 549
Query: 444 -----PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
++ Q PNP +R + L ++ H PP+ + + +P + A
Sbjct: 550 NRDDDEDTLEDLFQTSKIPNPQFQRLFQCLLHRALHPSDPLPPIQQHIWDMLDPPEEVTA 609
Query: 499 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPV 557
+ Q+ + F + E K + + + D P + ++ VN S+ S
Sbjct: 610 KCQAPLSKIKTLFPLTEAMKKRDQVTAQDVFQDNHEDGPVFKKAKTEEGEVNFSISSLAE 669
Query: 558 VTVDKIGDLTPIQDFEAMMSRRD 580
++ +G + P ++F ++ R++
Sbjct: 670 GSITSVGSVNPAENFRVLVRRKN 692
>gi|241263209|ref|XP_002405506.1| ku P80 DNA helicase, putative [Ixodes scapularis]
gi|215496806|gb|EEC06446.1| ku P80 DNA helicase, putative [Ixodes scapularis]
Length = 687
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 155/636 (24%), Positives = 288/636 (45%), Gaps = 60/636 (9%)
Query: 15 SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQD 74
+P S L + + +IQ+++ E+ +++ G+++T N L+ + Y H+ V+ +
Sbjct: 5 APGKPSDLEEAKTCAELMIQRRIFSESKDEIALVVCGSQKTNNSLSSD-NEYTHIDVVAN 63
Query: 75 IKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY-GETYKGKKHLCLITDALCPL 133
++ V L++ L + DF+DA+VV +D+L+ + + + G+K + L+++
Sbjct: 64 LQPVSFGLLEKLGSVKSTQHMCDFVDAVVVALDVLMDQTKNQKFAGRK-VVLLSNLGGAF 122
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE-------PHMRVIIENDNLLNI 186
D Q + IA M L + + +GE P R + + I
Sbjct: 123 DD-------SQQNVIANGMKNSSLSLTVVCPFDIENGEDDTAKLSPSQRKAV--GYVSKI 173
Query: 187 FSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT 246
F + +L K R + P T + +LE+ + I + Y K E K T
Sbjct: 174 LKTVEGDAYTFSQAVPALTTYEKKR-VRP-TPWNANLEIGPDLSIPISSYIKISEAKPKT 231
Query: 247 LKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 306
K+ + P V+ D ++ V + + GYRYG +VP S + ++
Sbjct: 232 WKQCVAQRPDV------PVRCDATLYRNDEKETEVEKAETVAGYRYGTTLVPFSDEDRDS 285
Query: 307 VKF-KPEKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKV 364
++ + + +++LGFTDA+NI RHYYM D ++ A G+ A A+SAL +A+++ V
Sbjct: 286 LECTRGGRGLQVLGFTDAANIKRHYYMGDKTSYVLARKGDESAEAAMSALIQALEKSKMV 345
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 424
AIVR + + + S +G L+P + ++ + F LP+ ED+R F F +
Sbjct: 346 AIVRYAFSE-RSSPRMGFLSPRIKDEY---ECLVFVQLPYMEDLRRFTFAPLDANKDNI- 400
Query: 425 PNEQQQEAADNLVKMLDLAP---SGK-GEILQPELTPNPALERFYHHLELKSEH-QDAAP 479
P E+Q D+L+ +DL+ +G+ E+ + T NP L+RFY ++ ++ H +D P
Sbjct: 401 PTEEQLSVFDDLIAAMDLSEVEVNGEPQELFKSSQTCNPYLQRFYQCVQHRALHPKDPLP 460
Query: 480 ---PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSG--- 533
P + D+LK P + ++ ++ F + E K+ + + G
Sbjct: 461 EVAPHVADALK----PPKAITELARPVLEKMASLFPLHEVVPEKRKQDNTVTKNGGGTVT 516
Query: 534 -----SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
SDEP S +D SM K+ + P++DF+ +++ +D D
Sbjct: 517 NASVSSDEPAAKKSRADF----SMADLVATATTKVDVVNPVEDFKKLLADKD--HRFDDV 570
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ I L +++ Y KAV L A R+ +
Sbjct: 571 CSQLEGVILKLFDDTLGRAVYAKAVRCLRAYREASL 606
>gi|355729443|gb|AES09870.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mustela putorius furo]
Length = 697
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 156/673 (23%), Positives = 294/673 (43%), Gaps = 84/673 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ A++L +DV +M + LP E K+ + +Q+++ E+ ++LFGT+ TEN
Sbjct: 1 KAAVVLCMDVGSAMSNSLPGEESPFELARKVMTMFVQRQVFAESRDEIALVLFGTDGTEN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGE 115
L + Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++ G+
Sbjct: 61 ALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQETVGK 119
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------ 163
++ K+H+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 120 KFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGD 171
Query: 164 -----VRASLSGEPH-MRVIIEN------------------DNLLNIFSKKSSAKTLFVD 199
R+ G ++ I E D L I+S S + L V
Sbjct: 172 RGDGNARSDHHGPSFPLKGITEQQKEGVRMVKKVMMSLEGEDGLDEIYSFSESLRQLCVF 231
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
R + L + + IK+ YK +E+ K S
Sbjct: 232 KKIEKRSIP----------WHCTLTIGSSLSIKIVAYKSIIQERV----KKSWTVVDART 277
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 278 LKKEDLQKETVYCLNDDNETEVLKEDTIQGFRYGSDIVPFSKVDEELMKYKSEGKCFSVL 337
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 338 GFCRSSQVHRRYFMGNQVLKVFAAADDEAAAVALSSLIHALDELDMVAVVRYVYDK-RAN 396
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VG+ P + + + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 397 PQVGMAFPYIKDTY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDALI 452
Query: 438 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ L G E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 453 DSMSLVKKGDKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPRERLPPIQQHILNMLDP 512
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 551
+ A+ Q + F + E K K + + + P ++ A + S
Sbjct: 513 PTEVTAQCQIPLSKIKTIFPLTEAIKKKDQVTAQDIFQDNHEEGPTSKKLKTEEGAADFS 572
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 611
+ S +V +G + P ++F ++ ++ ++A + N+I LE +NE + K
Sbjct: 573 VSSLAEGSVTSVGSVNPAENFRVLVRQKKAS--FEEASHQLINRIEQFLE-TNETPYFMK 629
Query: 612 AVELLVALRKGCI 624
+++ + R+ I
Sbjct: 630 SMDCITVFREEAI 642
>gi|348552630|ref|XP_003462130.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Cavia
porcellus]
Length = 729
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 154/675 (22%), Positives = 298/675 (44%), Gaps = 78/675 (11%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARYGNKAAVVLCVDVGFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T N L Y+++ V + + + D L++ + Q G+ DFLDA++V +D++
Sbjct: 61 TDGTNNALAAG-DQYQNITVHRHLMLPDFDLLEDIDSRIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 164
++ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ +
Sbjct: 120 RETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 165 --RASLSGEPHMRVIIENDNLLN--IFSKKSSAKTLFVDSTTSLRGARKTRDI------- 213
G+ ++++ + L I ++ + SL G +I
Sbjct: 172 KDGTGDRGDGNLQMGDHGSSFLQKGITEQQREGIHMVRKMMLSLEGTNGLEEIYSFSESL 231
Query: 214 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ +F+ L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKIERHSMPWPCQLTIGSNLSIKIVAYKSIVQEKVKKTWIVVD----ARTLKKE 287
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 323 ASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+S + R ++M + + +F A + A VA+S+L A+ E++ VAIVR + + + + V
Sbjct: 348 SSQVQRKFFMGNQVLKVFPAR-DDEAAAVALSSLIHALDELDMVAIVRYAYDR-RANPQV 405
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
GV P + E + + LPF ED+R++ F S K + P E Q +A D + +
Sbjct: 406 GVAFPFIKEAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLDAVDAFIDSM 461
Query: 441 DLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
L + E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 462 SLIEKDEEEDTIKDLFPTAKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPTE 521
Query: 496 LLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSGSDEPNGDGSVSDAQAV 549
+ A+ + + F + E K K + L E + + +G +A
Sbjct: 522 VTAKCEIPLSKIKTLFPLTEAIKRKDQVTAQEIFQDNLEEGLTIKKQKTEEG-----EAQ 576
Query: 550 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 609
S+ S +V K+G + P ++F A++ +++ ++A + N I L ++NE +
Sbjct: 577 FSVSSLAEGSVTKVGSVNPAENFRALVRQKNAS--FEEASHQLVNHIEQFL-DTNEIPYF 633
Query: 610 PKAVELLVALRKGCI 624
K+++ + A R+ I
Sbjct: 634 MKSLDCIKAFREEAI 648
>gi|452824587|gb|EME31589.1| ATP-dependent DNA helicase 2 subunit 2 isoform 2 [Galdieria
sulphuraria]
Length = 656
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 155/648 (23%), Positives = 283/648 (43%), Gaps = 56/648 (8%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
GGY H+K + + D LV+ D++DAI V D+LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 243
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 244 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
++VA+ R V R+ S + ++ P++ + + LP ED+R FPS +
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHLKSDGIL--CLFLCQLPVLEDIRNHTFPSLHS--L 405
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL---------KS 472
+ + +Q EA N + L + + + + +YH L ++
Sbjct: 406 ADNVDMEQVEAIRNWIASRQLKDTFQ----------STKVFHYYHQRLLQCLQDRAIYQT 455
Query: 473 EHQD--AAPPPLDDSLKKITEPDPTLLAESQS-AIDAFCGQFVIKENPKLKKSTRRFLRE 529
H D ++ PPL L+++ E L S + F +++ K K+ +R +
Sbjct: 456 LHNDEKSSLPPLSPYLERVLENTNFLTCGRDSESTKQLWKYFPLRKVDKPKRRKQRTM-N 514
Query: 530 KPSGSD-------EPNGDGSVSDAQAVNSMESKPVVTV----DKIGDLTPIQDFEAMMSR 578
PS + PN V+++ + E T+ K+G+ TP+ DFE M+S
Sbjct: 515 MPSPHEISIEPYLPPNAWSDVNESFEEYTKEEPIEETIFAEKSKVGEATPVADFENMLSN 574
Query: 579 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
+ DW+D+A++ M++ I L + K + L A RK CI+E
Sbjct: 575 KR-HDWLDEAMKQMQDIIERLFSEELDQQRDDKIIHCLTAFRKRCIME 621
>gi|197100259|ref|NP_001126362.1| X-ray repair cross-complementing protein 5 [Pongo abelii]
gi|55731214|emb|CAH92321.1| hypothetical protein [Pongo abelii]
Length = 732
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 152/677 (22%), Positives = 300/677 (44%), Gaps = 83/677 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSG 176
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFV 198
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ + P L + + I++ YK +E+ D
Sbjct: 237 -----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AK 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG +VP S A+ E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKADEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + +
Sbjct: 343 LGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 402 NPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDAL 457
Query: 437 VKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + LA + ++ PNP +R + L ++ H PP+ + +
Sbjct: 458 IDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN- 550
P + +SQ + F + E K + T + + + + D P ++ +
Sbjct: 518 PPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHF 576
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGI 607
S+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 577 SVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETP 630
Query: 608 NYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 YFMKSMDCIRAFREEAI 647
>gi|338725581|ref|XP_001489450.3| PREDICTED: x-ray repair cross-complementing protein 5 [Equus
caballus]
Length = 776
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 160/686 (23%), Positives = 297/686 (43%), Gaps = 100/686 (14%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGSKAAVVLCIDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L E Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTKNALAGE-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSRQADFLDALIVCMDVIQ 119
Query: 111 KK-YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV-------------- 153
++ G+ ++ KKH+ + TD P KD D+ + S+I+ Q
Sbjct: 120 RETVGKKFE-KKHIEVFTDLSSPFSKDQLDIIIHNLKKSSISLQFFLPFPIGKEDGTGDR 178
Query: 154 ----------AFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKS 191
+K I V SL GE + L I+S
Sbjct: 179 GDGNLGSDHHGLDFPLKGITEQQKEGIQMVKKVMMSLEGE---------EGLDEIYSFSE 229
Query: 192 SAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 251
S + L V R + L + + IK+ YK +EK K S
Sbjct: 230 SLRRLCVFKKIERRS----------IPWACQLTIGSNLSIKIVAYKSIVQEKV----KKS 275
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
+V+ + Y +D VP E+ I+GYRYG ++P S + E +K+K
Sbjct: 276 WTVVDARTVKKEDVQKETVYCLNDDDETEVPKEETIQGYRYGSDIIPFSKVDEEQMKYKS 335
Query: 312 E-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E K +LGF +S + R Y+M + L + A + A VA+S+L A+ E++ VA+VR
Sbjct: 336 EGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAARDDKAAAVALSSLIHALDELDMVAVVRY 395
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
V+ + + + VGV P + + + + LPF ED+R++ F S K P E Q
Sbjct: 396 VYDR-RANPQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQ 450
Query: 430 QEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDD 484
A L+ + L + E +L PNP +R + L ++ H PP+
Sbjct: 451 LSAVGALIDSMSLVKKDEEENTIEDLFPTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQ 510
Query: 485 SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG--- 541
+ + +P + + Q + F + E +KK + ++ S + E
Sbjct: 511 HILNMLDPPTEVTTKCQVPLSKIKTLFPLTE--AIKKKDQVTAQDVFSDNHEEGPTSKKF 568
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
+A+ S+ S + +G + P ++F ++ +++ + E+ +++ +E
Sbjct: 569 KTEEAEVSFSISSLAEGRITSVGSVNPAENFRVLVRQKNA------SFEEASHQLIKHIE 622
Query: 602 ---NSNEGINYPKAVELLVALRKGCI 624
++NE + K+++ + R+ I
Sbjct: 623 QFLDTNETPYFMKSMDCIRVFREEAI 648
>gi|383276559|ref|NP_001244295.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|380816286|gb|AFE80017.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 152/677 (22%), Positives = 300/677 (44%), Gaps = 83/677 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFV 198
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ + P L + + I++ YK +E+ D
Sbjct: 237 -----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AK 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M + L + A + A VA+S+L A+++++ VAIVR + + +
Sbjct: 343 LGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 402 NPQVGVAFPHIKHNC---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDAL 457
Query: 437 VKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + LA + ++ PNP +R + L ++ H PP+ + +
Sbjct: 458 IDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN- 550
P + +SQ + F + E K + T + + + + D P ++ +
Sbjct: 518 PPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHF 576
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGI 607
S+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 577 SVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETP 630
Query: 608 NYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 YFMKSMDCIRAFREEAI 647
>gi|355565162|gb|EHH21651.1| hypothetical protein EGK_04770, partial [Macaca mulatta]
Length = 729
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 152/677 (22%), Positives = 300/677 (44%), Gaps = 83/677 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFV 198
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ + P L + + I++ YK +E+ D
Sbjct: 237 -----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AK 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M + L + A + A VA+S+L A+++++ VAIVR + + +
Sbjct: 343 LGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 402 NPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDAL 457
Query: 437 VKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + LA + ++ PNP +R + L ++ H PP+ + +
Sbjct: 458 IDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN- 550
P + +SQ + F + E K + T + + + + D P ++ +
Sbjct: 518 PPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHF 576
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGI 607
S+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 577 SVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETP 630
Query: 608 NYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 YFMKSMDCIRAFREEAI 647
>gi|452824588|gb|EME31590.1| ATP-dependent DNA helicase 2 subunit 2 isoform 1 [Galdieria
sulphuraria]
Length = 691
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 156/648 (24%), Positives = 284/648 (43%), Gaps = 56/648 (8%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
GGY H+K + + D LV+ D++DAI V D+LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 243
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 244 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
++VA+ R V R+ S + ++ P++ K + + LP ED+R FPS +
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHL--KSDGILCLFLCQLPVLEDIRNHTFPSLHS--L 405
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL---------KS 472
+ + +Q EA N + L + + + + +YH L ++
Sbjct: 406 ADNVDMEQVEAIRNWIASRQLKDTFQ----------STKVFHYYHQRLLQCLQDRAIYQT 455
Query: 473 EHQD--AAPPPLDDSLKKITEPDPTLLAESQS-AIDAFCGQFVIKENPKLKKSTRRFLRE 529
H D ++ PPL L+++ E L S + F +++ K K+ +R +
Sbjct: 456 LHNDEKSSLPPLSPYLERVLENTNFLTCGRDSESTKQLWKYFPLRKVDKPKRRKQRTM-N 514
Query: 530 KPSGSD-------EPNGDGSVSDAQAVNSMESKPVVTV----DKIGDLTPIQDFEAMMSR 578
PS + PN V+++ + E T+ K+G+ TP+ DFE M+S
Sbjct: 515 MPSPHEISIEPYLPPNAWSDVNESFEEYTKEEPIEETIFAEKSKVGEATPVADFENMLSN 574
Query: 579 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
+ DW+D+A++ M++ I L + K + L A RK CI+E
Sbjct: 575 KR-HDWLDEAMKQMQDIIERLFSEELDQQRDDKIIHCLTAFRKRCIME 621
>gi|383421375|gb|AFH33901.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|384949286|gb|AFI38248.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 152/677 (22%), Positives = 300/677 (44%), Gaps = 83/677 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFV 198
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ + P L + + I++ YK +E+ D
Sbjct: 237 -----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AK 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M + L + A + A VA+S+L A+++++ VAIVR + + +
Sbjct: 343 LGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 402 NPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDAL 457
Query: 437 VKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + LA + ++ PNP +R + L ++ H PP+ + +
Sbjct: 458 IDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN- 550
P + +SQ + F + E K + T + + + + D P ++ +
Sbjct: 518 PPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHF 576
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGI 607
S+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 577 SVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETP 630
Query: 608 NYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 YFMKSMDCIRAFREEAI 647
>gi|355750820|gb|EHH55147.1| hypothetical protein EGM_04294, partial [Macaca fascicularis]
Length = 729
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 156/687 (22%), Positives = 302/687 (43%), Gaps = 103/687 (14%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 140 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 188
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPPKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 189 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 248
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 309 FKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAI 366
+K E K +LGF +S + R ++M + L + A + A VA+S+L A+++++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAI 392
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 426
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 427 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 541
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 542 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 600
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 601 E---NSNEGINYPKAVELLVALRKGCI 624
E ++NE + K+++ + A R+ I
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAI 647
>gi|378729781|gb|EHY56240.1| ATP-dependent DNA helicase 2 subunit 2 [Exophiala dermatitidis
NIH/UT8656]
Length = 697
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 142/611 (23%), Positives = 270/611 (44%), Gaps = 54/611 (8%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K ++GV+ GT+ET N++ + Y ++ VLQ I + +Q+L L P T D
Sbjct: 48 KTLQIGVVGLGTDETSNDMMDQDDSYRNISVLQRISQILMPELQALPELLRPSHTDDRDV 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ I++ DM++K + + K KK + +IT+A + D D+G + ++V G+
Sbjct: 108 VSGIIIAGDMIMK-HCKNLKYKKRIVVITNANGYIDDDDIGNTAEHFKNHGIELVILGID 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ G+P + + N+ L + S + + + P
Sbjct: 167 FDDPEYGFKEEGKPPQK--MHNEQTLQKLADLSGGIVGTMQEAIDELSRPHIKPVRPTPT 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA--PSTDKFATHEVKVDYE 270
++G L+L + + I V Y KT ++ PT Y+ + PS + +T V Y+
Sbjct: 225 YKGLLKLGDPENYDTALCIDVERYFKTSIKRPPTASAYAVRPEDPSDENLST--VHNLYK 282
Query: 271 YKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
YK ++ S + V E+ KG+ YG V IS +E K + +LGF N+
Sbjct: 283 YKVKDEESGGGTRDVDREELAKGFEYGRTAVAISESEQNITKLETYSGYDILGFIPVDNV 342
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R+ + + ++ +A+ GN +A +A+S+L A+ E+ VA+ R V + + ++ +L+P
Sbjct: 343 ERYMMLDNSSMIVAQKGNDKAAIALSSLVHALYEVRSVAVGRLVKKDMTEPIIT-LLSPF 401
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQE--AADNLVKMLDLA 443
+ + N+LPFAEDVR ++FP + VS + + + AD L M D
Sbjct: 402 AEQDF---ECLIENILPFAEDVRTYRFPPLHRVLTVSGKEITEHRNLPTADLLQGMSDFV 458
Query: 444 PS-----GKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLL 497
S E + + T +P L ++ ++ H +D P + L +P+ L
Sbjct: 459 DSMSLVHKDDEEMSIDDTFSPVLHTIEGAIKHRAVHPKDPLPEKSEMFLSYSRQPE-HLQ 517
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFL-REKPSGSDEPNGDGSVSDAQAVNSMESKP 556
A+S+ A+ +K+ P K R++ EKP ++ + +
Sbjct: 518 AKSKHALAKLIAAADVKKVPPRTKGRRKYRDTEKP-----------------LSGLNVED 560
Query: 557 VVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 613
+ ++ ++P I +F+ M+ D A++ M + + + S +NY + +
Sbjct: 561 LFRKEERNQISPNNAIPEFKQMIEYSTDMDVAKDAVKQMGSIMEDWISKSFGDVNYDRVL 620
Query: 614 ELLVALRKGCI 624
E L +R+ +
Sbjct: 621 EGLSVVREEVV 631
>gi|342885898|gb|EGU85850.1| hypothetical protein FOXB_03698 [Fusarium oxysporum Fo5176]
Length = 716
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 152/638 (23%), Positives = 275/638 (43%), Gaps = 74/638 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T+ET+N+L + GYE++ VLQ++ + +++L+ L P T +GD + AI
Sbjct: 53 VGVLGLRTDETDNKLQDD-DGYENIAVLQELGPMTMSSLRNLQSLVKPSNTWSGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
V+ VDM I + + K + + L+TD P+ D+G +++ Q+ G+ +
Sbjct: 112 VLAVDM-IDTFTKKLKWNRKIFLVTDGQGPMDADDLGDISKKMNDSNIQLTVLGVDFDDP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFR 220
+P + EN+ L + ++ L R + + P +
Sbjct: 171 EYGFKEEDKPSTKK--ENEQALRSLVNDCQDGVIANITEAIDELDTPR-IKAVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKTG-------------EEKFPTLKKYSDKAPSTDKFA 261
G L L + + I V Y KT E P + A +
Sbjct: 228 GPLTLGDPNTFPAALNINVERYFKTKLARPLTASTVVVKSEGAPDSEPTQADADDMEGIE 287
Query: 262 THEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
VK YK V DP + V + KGY YG V IS +E+ K +KS
Sbjct: 288 FSAVKQARSYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEYNITKIDTQKSFS 346
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
++GF S + + + +A ++++ +A+S+L A+ E+ AI R V + G+
Sbjct: 347 IVGFIPCSKYEPFLNLGETCVTVARKFDAKSALALSSLVWALSELESYAIARIVTKDGKD 406
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
++V +L P+V + + Y LPFAED+R +QFP K V+ Q P +
Sbjct: 407 PLLV-LLAPSVEPDM---ECLYDIPLPFAEDIRSYQFPPLDKVITVTGQTLTTHRLLPTD 462
Query: 428 QQQEAADNLVKMLDLAPSG---KG---EILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
+ +A + V +DL+ G KG E + + T NP + R H ++ ++ + + P
Sbjct: 463 ELSDAMSDYVDAMDLSTYGLDDKGDPDEYVSIDETFNPTVHRVNHAVKSRALYPERPVPD 522
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 541
+ L + + P L+ Q +DA +K+ P K R KP
Sbjct: 523 VPSILLRFSHPTQDLIETVQRKVDALVEAADVKKVPPKAKGKRGRETVKP---------- 572
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
++ ++ ++ ++ GD++P + +F+ M++ + +++A + M I
Sbjct: 573 -------ISGLDVDALLGEEEKGDISPDNAVPEFKQMLAATEELSQIEEAAKQMGAIIST 625
Query: 599 LLENSNEGINYPKAVELLVALRKGCI-LEQVYLSVSFF 635
+ S Y +A+E L +R+ I LE+ L +F
Sbjct: 626 FVMESFGDAKYQRALECLGVMREELINLEEPGLYNTFM 663
>gi|334347204|ref|XP_003341902.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Monodelphis domestica]
Length = 835
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 148/620 (23%), Positives = 272/620 (43%), Gaps = 67/620 (10%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDVS +M++ P E K+ + +Q+++ E+ ++LFGT+ N
Sbjct: 37 AVVLCLDVSFTMNNSFPGEESSFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDLFANGC 96
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YGETY 117
+ Y+++ V + + V D L + +++ Q G+ DFLDA++V +D++ K+ G+ +
Sbjct: 97 XS-LHQYQNINVHRPLMVPDLDLXKDIQNAIQPGSGHADFLDALIVCMDVIQKETIGKKF 155
Query: 118 KGKKHLCLITDALCP------------LKDPDVGTK--------------EDQVSTIARQ 151
+ +KH+ + TD P LK D+ + + S+ +
Sbjct: 156 E-RKHIEMFTDLNSPFSKDQMDIIISNLKRSDISLQFFLPFPIDKEDGDGDTDDSSFPSE 214
Query: 152 MVAFGLRMKNIV--VRASLSGEPHMRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLRGAR 208
L K + + SLS +M + +E ++ LN I+S S + L V R
Sbjct: 215 RQKPSLPQKGLTKQQKESLSVVKNMMMSLEGEDGLNEIYSFSESLRQLCVFKKIERRPM- 273
Query: 209 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
P L + + IK+ YK +EK K S +V+ +
Sbjct: 274 ------PWPCL---LTIGSNLSIKIVAYKSVTQEKV----KKSWTVVDARTLRKEDVQKE 320
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S +
Sbjct: 321 TVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSSQVH 380
Query: 328 RHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R ++M + L + A + A VA+S+L A+ E++ VAIVR + + + + VGV P
Sbjct: 381 RKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYAYDR-RSNPQVGVAFPF 439
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ + + + LP+ ED+R++ F S + P E Q A D L+ + L +
Sbjct: 440 IKQAY---ECLVYVQLPYMEDLRQYLFSSL-RNNKKCTPTEAQLSAVDALIDSMSLVNND 495
Query: 447 KGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ E + Q PNP +R + L ++ + PP+ L + P + A+ Q
Sbjct: 496 EDEDTIEDMFQTSKIPNPQFQRLFQCLLHRALYPSDPLPPIQQHLWDMLNPPTEVTAKCQ 555
Query: 502 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP-NGDGSVSDAQAVNSMESKPVVTV 560
+ + F + E K + + + DEP + + S+ S +
Sbjct: 556 APLSKIKTLFPLTEAIKKRDQMTAQDIFQDNHEDEPIPKKAKTEEGEGNFSISSLAEGNI 615
Query: 561 DKIGDLTPIQDFEAMMSRRD 580
+G + P ++F ++ R++
Sbjct: 616 TSVGSVNPAENFRVLVRRKN 635
>gi|332209991|ref|XP_003254095.1| PREDICTED: X-ray repair cross-complementing protein 5 [Nomascus
leucogenys]
Length = 732
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 151/677 (22%), Positives = 299/677 (44%), Gaps = 83/677 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 139
+ + G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSG 176
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFV 198
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ + P L + + I++ YK +E+ D
Sbjct: 237 -----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AK 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + +
Sbjct: 343 LGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P++ + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 402 NPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDAL 457
Query: 437 VKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + LA + ++ PNP +R + L ++ H PP+ + +
Sbjct: 458 IDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN- 550
P + +SQ + F + E K + T + + + + D P ++ +
Sbjct: 518 PPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHF 576
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGI 607
S+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 577 SVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETP 630
Query: 608 NYPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 631 YFMKSMDCIRAFREEAI 647
>gi|358368662|dbj|GAA85278.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus kawachii IFO
4308]
Length = 712
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 269/625 (43%), Gaps = 77/625 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
+GV+ T++T NEL + Y H+ VL IK ++SL P T GD + A+
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIKQFLMPDIRSLSDRIKPSKTNKGDAISAL 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMV 153
V+ + M+I + + K K+ + L+T+ P+ ++ KED + I
Sbjct: 112 VLAIQMIITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDP 170
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
+G++ ++ R + EN+ LL ++ ++ + + +
Sbjct: 171 DYGVKEEDKDPRKA-----------ENEALLRSLAEDCDGAYGTLEQAVAELETPRVKST 219
Query: 214 SPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDK---------APSTD 258
F+G L+L ++I V Y +T K P+ +++ + A S D
Sbjct: 220 RITASFKGHLQLGNPAEYDTAVRIPVERYYRTYVAKAPSASQFTVRNEEEMEAAGAGSQD 279
Query: 259 KFATHEVKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
+ V+ Y+ + ED V +Q KGY YG +VPIS + + +
Sbjct: 280 GSSLVGVRNSRSYQIDDGTTEDGVTTVDRDQLAKGYEYGRTLVPISETDENITTLETFAA 339
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++
Sbjct: 340 IELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKEN 399
Query: 375 QQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 400 KPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVVTVSGKVVTQHRN 453
Query: 425 -PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAP 479
P++ A D VK ++L + + E L + + +P L R + ++ H +
Sbjct: 454 LPSDDLLNAMDKYVKSMELTDADENGDPTESLPIDDSFSPVLHRIDSAVRHRAIHPNDPI 513
Query: 480 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 539
PP L K + P L+ +S+ +D +K+ P K T+R S E
Sbjct: 514 PPPAPVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKR--------SRETEK 565
Query: 540 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 599
S D A+ E + KI I +F+ +S+ + D + A++ M I
Sbjct: 566 PLSGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIDTIKDAVKQMSTIIEDQ 620
Query: 600 LENSNEGINYPKAVELLVALRKGCI 624
+ +S +NYP+ E LV +R+ I
Sbjct: 621 IRHSLGDVNYPRVAEGLVVMREELI 645
>gi|350537451|ref|NP_001233669.1| X-ray repair cross-complementing protein 5 precursor [Cricetulus
griseus]
gi|1044791|gb|AAA80450.1| Ku (p70/p80) protein [Cricetulus griseus]
gi|1589660|prf||2211394A Ku86 protein
Length = 732
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 157/683 (22%), Positives = 288/683 (42%), Gaps = 102/683 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N L E Y+++ V + + + D L++ ++ Q G+ D LDA++V +D++ ++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 115 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM---------KNIVVR 165
+ ++ KKH+ + TD P +DQ+ I + G+ + KN
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 166 ASLSGEPHM------------------------RVIIE---NDNLLNIFSKKSSAKTLFV 198
G+ + RV++ D L I+S S + L V
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGEDGLDEIYSFSESLRRLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
R + L + + IK+ YK +EK K S
Sbjct: 237 FKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----KKSWIVVDAR 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
++ + L + E +L PNP +RF+ L + H PP+ + +
Sbjct: 458 IESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPIQQHILNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSG----SDEPNGDG 541
+ A+ + + F + E K K + E P+ +++ G
Sbjct: 518 LPTEMKAKCEIPLSKVRTLFPLTEAVKKKDQVTAQDIFQDIHEEGPAAKKCKTEKEEGHI 577
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
S+S N V K+G + P++ F ++ ++ ++A + + I L
Sbjct: 578 SISSVAEGN---------VTKVGSVNPVESFRVLVRQKIAS--FEQASLQLISHIEQFL- 625
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
++NE + + K++E + A R+ I
Sbjct: 626 DTNETLYFMKSMECIKAFREEAI 648
>gi|302406464|ref|XP_003001068.1| Ku80 [Verticillium albo-atrum VaMs.102]
gi|261360326|gb|EEY22754.1| Ku80 [Verticillium albo-atrum VaMs.102]
Length = 722
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 153/631 (24%), Positives = 275/631 (43%), Gaps = 69/631 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K +GV+ T+ET + L E GYE++ +LQ+I + H ++ L+ + P T GD
Sbjct: 49 KTWTIGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMHSLKELQDVIVPSETHTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ VDM+ +KY + K + + LITD P+ D +++ +++ G+
Sbjct: 108 VSAIVIAVDMM-EKYTKALKYARKIYLITDGTGPIDGDDFEDITKKINQDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ +P ++ +N+ LL ++ SK A+ + + + + P
Sbjct: 167 FDDAEYGFKEEDKPSLKA--KNERLLKDLVSKCKDAQLATIAEAIDELDTPRLKPVRPYK 224
Query: 218 IFRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSD----KAPSTDKFAT 262
+ G L L + M I V Y KT + P T+ +D +AP +
Sbjct: 225 SYDGPLTLGDVKDPKHPSPMVINVERYFKTKLARPPPASTVVLRTDPGPSQAPEGEGMEG 284
Query: 263 HEVKVDY-------EYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
E +++ YK V DP + V + KGY YG V IS +EW K +
Sbjct: 285 IESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESEWNMTKIE 343
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K+ +++GF A M + + ++ + ++ +A+S+L A+ E++ A+ R V
Sbjct: 344 TNKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSSYAVARIV 403
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
+ G++ ++ +L P + + + Y LPFAEDVR +QFP + VS Q
Sbjct: 404 LKDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVSGQTLTKH 459
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKGEI-LQP-ELTP-----NPALERFYHHLELKSEH 474
P+++ +A + V +DL K E +P E P NPA+ R + ++
Sbjct: 460 RLIPDDELNDAMSDFVDAMDLDTFVKDEDGGEPTEYAPIDESFNPAIHRINQVVRDRAIK 519
Query: 475 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKP-SG 533
P+ L + EP LL ++++ + A +K+ P K+ R KP SG
Sbjct: 520 PTGDIEPIPRVLLRYAEPPEDLLTKAKADMKALIKAAEVKKVPPKAKNKRNRDAAKPLSG 579
Query: 534 SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 593
D GS+ + S ++ + +F+ ++ +++A M
Sbjct: 580 LDIDALLGSLPKRARLVSRDNA-------------VPEFKQALTSATDIAAIEEAASQMG 626
Query: 594 NKIFGLLENSNEGINYPKAVELLVALRKGCI 624
I GL+ +S Y +A+E L +R I
Sbjct: 627 EVIRGLVTDSFGDAEYNRAIEALGVMRTELI 657
>gi|344239522|gb|EGV95625.1| ATP-dependent DNA helicase 2 subunit 2 [Cricetulus griseus]
Length = 732
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 157/683 (22%), Positives = 288/683 (42%), Gaps = 102/683 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKK-YG 114
N L E Y+++ V + + + D L++ ++ Q G+ D LDA++V +D++ ++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 115 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM---------KNIVVR 165
+ ++ KKH+ + TD P +DQ+ I + G+ + KN
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 166 ASLSGEPHM------------------------RVIIE---NDNLLNIFSKKSSAKTLFV 198
G+ + RV++ D L I+S S + L V
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGEDGLDEIYSFSESLRQLCV 236
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
R + L + + IK+ YK +EK K S
Sbjct: 237 FKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----KKSWIVVDAR 282
Query: 259 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 317
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDK-RA 401
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 437 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
++ + L + E +L PNP +RF+ L + H PP+ + +
Sbjct: 458 IESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPIQQHILNMLN 517
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSG----SDEPNGDG 541
+ A+ + + F + E K K + E P+ +++ G
Sbjct: 518 LPTEMKAKCEIPLSKVRTLFPLTEAVKKKDQVTAQDIFQDIHEEGPAAKKCKTEKEEGHI 577
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
S+S N V K+G + P++ F ++ ++ ++A + + I L
Sbjct: 578 SISSVAEGN---------VTKVGSVNPVESFRVLVRQKIAS--FEQASLQLISHIEQFL- 625
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
++NE + + K++E + A R+ I
Sbjct: 626 DTNETLYFMKSMECIKAFREEAI 648
>gi|297722715|ref|NP_001173721.1| Os03g0856200 [Oryza sativa Japonica Group]
gi|255675060|dbj|BAH92449.1| Os03g0856200 [Oryza sativa Japonica Group]
Length = 97
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 77/97 (79%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
KE+GGY+HV V +DIKVVD +L++LP+GT GD
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGD 97
>gi|389632287|ref|XP_003713796.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
gi|351646129|gb|EHA53989.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
Length = 726
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 154/642 (23%), Positives = 272/642 (42%), Gaps = 69/642 (10%)
Query: 26 EKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLV 83
+KLC+ + K +VGV+ T+ T+N L + G GY ++ VLQ++ + +
Sbjct: 38 DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNISVLQNVAPMTLSAL 92
Query: 84 QSL--KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTK 141
+ L K +P T GD + AIVV + M+ + + K K+ + L+TD + DVG
Sbjct: 93 KLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTDGQGAIDGDDVGDI 152
Query: 142 EDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVD 199
+++ + ++ G+ + E ++ N+ LL S K S ++
Sbjct: 153 ARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSISTECKESVYGTMIE 210
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKTGEEKFPT-----L 247
+ L R + P F G L L + + I V Y KT + + T +
Sbjct: 211 AVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKTKQARPITASNVMV 269
Query: 248 KKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGP 294
K +D S F ++K YK V DP + VP ++ +GY YG
Sbjct: 270 KSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDVPQDELARGYLYGR 328
Query: 295 QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSAL 354
VP+ +E+ K + +KS ++GF R M + ++ A N + +A SAL
Sbjct: 329 TAVPMPESEFNITKLETKKSFTIIGFIAWEKYERFLNMGESSVIFASKFNEKDELAFSAL 388
Query: 355 ARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
A+ E + R V + G++ ++ +L P++ I + Y LPFAED+R +QFP
Sbjct: 389 VNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYDVPLPFAEDIRYYQFP 444
Query: 415 SFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTP-----NPA 460
K + Q P+++ +EA + V +D++ +G + E P +P
Sbjct: 445 PLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDEEAQEYAPIEDTYSPI 504
Query: 461 LERFYHHLELKSEHQDAAPPPLD-DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKL 519
+ R + + H D P LD + L + + P + + ++ I+ +K+ P
Sbjct: 505 IHRVNQAIRFRVVHPD-KPLGLDSEVLTRYSVPPRKVTSHAKDQIERLIKVAEVKKVPPK 563
Query: 520 KKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSR 578
K R+ KP SG D DA NS KI + +F+ M++
Sbjct: 564 AKGKRQREVVKPISGLD--------VDALLNNSSNGSSKAKRAKISAENSVPEFKQMLAS 615
Query: 579 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
D + ++ A + M + + S +NY +A E + +R
Sbjct: 616 ADKVETIENATKQMGEVVTSFINTSMGDMNYDRAAENMRVMR 657
>gi|158254916|dbj|BAF83429.1| unnamed protein product [Homo sapiens]
Length = 732
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 151/676 (22%), Positives = 296/676 (43%), Gaps = 81/676 (11%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDA 117
Query: 109 LI---------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
+ K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 551
+ +SQ + F + E K + T + + + + D P ++ + S
Sbjct: 519 PAEVTTKSQIPLSKIKTLFPLTEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFS 577
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 608
+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 578 VSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPY 631
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 632 FMKSIDCIRAFREEAI 647
>gi|431918002|gb|ELK17231.1| ATP-dependent DNA helicase 2 subunit 2 [Pteropus alecto]
Length = 780
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 132/548 (24%), Positives = 234/548 (42%), Gaps = 82/548 (14%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M++ P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 26 AVVLCMDVGFTMNNSFPGEESPFELTKKVITMFVQRQVFAESKDEIALVLFGTDGTENAL 85
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYK 118
+ Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++ ++
Sbjct: 86 ACK-DQYQNITVHRHLMLPDFDLLEDIESKIQTGSQQADFLDALIVCMDVIQQETVGKKF 144
Query: 119 GKKHLCLITDALCPLKDPDVGT---------------------KEDQVS-----TIARQM 152
K+H+ + TD P + T KED+ ++
Sbjct: 145 NKRHIEVFTDLSSPFSKDQLDTIIHNLRNSSISLQFFLPFPIGKEDETGDRGDGSLRSDH 204
Query: 153 VAFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ +K I V SL GE D L I+S S + L +
Sbjct: 205 LGPAFPLKGITEQQKEGIQMVKTVMMSLEGE---------DGLDEIYSFSESLRQLCI-- 253
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
+ +T P L + + I + YK +EK K S
Sbjct: 254 ---FKKIERTSMPWPC-----QLTIGSNLSINIMAYKSILQEKV----KKSWMVVDARTL 301
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLG 319
+++ + Y +D VP E I+G+RYG ++P S + E +K+K K +LG
Sbjct: 302 RKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSAGKCFSVLG 361
Query: 320 FTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F +S + R YYM + L + A + A VA+S+L A+ E+ VAIVR + + + +
Sbjct: 362 FCRSSQVHRKYYMGNQVLKVFAAKDDEAAAVALSSLIHALDELGMVAIVRYAYDK-RANP 420
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
VGV P + + + + LPF ED+R++ F S + P E Q A D L+
Sbjct: 421 QVGVAFPYIKDTY---ECLVYVQLPFMEDLRQYMFSSLHN-NKKYTPTEAQLSAIDALID 476
Query: 439 MLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
++L + E +L PNP +R + L ++ H PP+ + + +
Sbjct: 477 SMNLIKKNEEEDTIEDLFPTTKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDTP 536
Query: 494 PTLLAESQ 501
+ A+ Q
Sbjct: 537 TEVTAKCQ 544
>gi|161789042|sp|Q7RX73.2|KU80_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Protein mus-52
Length = 725
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 148/605 (24%), Positives = 263/605 (43%), Gaps = 62/605 (10%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ P E P NP + + ++ + DA PP+ + L + T P LLA+++
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAK 546
Query: 502 SAIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVT 559
+ ID +K+ PK++ R KP SG D D +S+ + + P+++
Sbjct: 547 TEIDGLIQAAEVKKVPPKVQGKRGRKDTVKPLSGLD---IDALLSETRP--RTKKTPIIS 601
Query: 560 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 619
+ I +F+ ++ + + ++ A + M N I L+ +S + YP+A E L +
Sbjct: 602 TENA-----IPEFKQILETAEDDETIEIAAKQMGNIICKLVSDSFADVLYPRAAENLRVM 656
Query: 620 RKGCI 624
R+ I
Sbjct: 657 REELI 661
>gi|10863945|ref|NP_066964.1| X-ray repair cross-complementing protein 5 [Homo sapiens]
gi|125731|sp|P13010.3|XRCC5_HUMAN RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=86 kDa subunit of Ku antigen; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku80; AltName: Full=Ku86;
AltName: Full=Lupus Ku autoantigen protein p86; AltName:
Full=Nuclear factor IV; AltName: Full=Thyroid-lupus
autoantigen; Short=TLAA; AltName: Full=X-ray repair
complementing defective repair in Chinese hamster cells
5 (double-strand-break rejoining)
gi|307093|gb|AAA59475.1| Ku antigen [Homo sapiens]
gi|307094|gb|AAA36154.1| Ku (p70/p80) subunit [Homo sapiens]
gi|17512093|gb|AAH19027.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|66267600|gb|AAH95442.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|109821670|gb|ABG46942.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [Homo sapiens]
gi|119590968|gb|EAW70562.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_a [Homo sapiens]
gi|123984481|gb|ABM83586.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|123998499|gb|ABM86851.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|224487761|dbj|BAH24115.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [synthetic construct]
Length = 732
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 151/676 (22%), Positives = 297/676 (43%), Gaps = 81/676 (11%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LI---------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
+ K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 551
+ +SQ + F + E K + T + + + + D P ++ + S
Sbjct: 519 PAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFS 577
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 608
+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 578 VSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPY 631
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 632 FMKSIDCIRAFREEAI 647
>gi|426338512|ref|XP_004033222.1| PREDICTED: X-ray repair cross-complementing protein 5 [Gorilla
gorilla gorilla]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 151/676 (22%), Positives = 297/676 (43%), Gaps = 81/676 (11%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LI---------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
+ K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 551
+ +SQ + F + E K + T + + + + D P ++ + S
Sbjct: 519 PAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFS 577
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 608
+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 578 VSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPY 631
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 632 FMKSIDCIRAFREEAI 647
>gi|119590969|gb|EAW70563.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_b [Homo sapiens]
Length = 827
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 150/672 (22%), Positives = 296/672 (44%), Gaps = 81/672 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 278 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 331
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 332 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 382
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 383 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 442
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 443 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 501
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 502 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 557
Query: 442 LAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
LA + ++ PNP +R + L ++ H PP+ + + P +
Sbjct: 558 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEV 617
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESK 555
+SQ + F + E K + T + + + + D P ++ + S+ S
Sbjct: 618 TTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSL 676
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKA 612
+V +G + P ++F ++ ++ + E+ N++ +E ++NE + K+
Sbjct: 677 AEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKS 730
Query: 613 VELLVALRKGCI 624
++ + A R+ I
Sbjct: 731 IDCIRAFREEAI 742
>gi|395823741|ref|XP_003785139.1| PREDICTED: X-ray repair cross-complementing protein 5 [Otolemur
garnettii]
Length = 755
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 151/674 (22%), Positives = 295/674 (43%), Gaps = 76/674 (11%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + IQ+++ E+ ++LFG
Sbjct: 1 MARPGSKAAVVLCMDVGFAMGNSYPGEESPFEQAKKVITMFIQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
T+ T+N L + Y+++ V + +++ D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 61 TDGTKNALA-DGDQYQNITVHRHLRLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 111 KKYGETYKGKKHLCLITDALCP------------LKDPDVGTK---------EDQVSTIA 149
++ K+H+ + TD P LK D+ + ED +
Sbjct: 120 RETVGKKFEKRHIEVFTDLSSPFSKDQLDIIMHNLKKSDISLQFFLPFPIGDEDGIGDRG 179
Query: 150 RQMVAFGLRM-----KNIVVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDST 201
+ R K I + + RV++ D L I+S S + L V
Sbjct: 180 EGDLCLDHRGPSFPPKGITEQQKEGIQMVKRVMMFLDGKDGLDEIYSFSDSLRQLCVFKK 239
Query: 202 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
S R P + L + + I++ YK E D
Sbjct: 240 IS-------RSSMPWSCL---LTIGSNLSIRIVAYKSMLHENVKKTWTVVD----ARTLK 285
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 320
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 286 KEDIQKETVYCLNDDDETEVLKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGF 345
Query: 321 TDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
+S + R ++M + L + A + A VA+S+L A+ E++ AIVR + + + +
Sbjct: 346 CRSSQVQRKFFMGNQVLKVFAAKADEAAAVALSSLIHALDELDMAAIVRYTYDR-RANPQ 404
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
VGV P++ + + + LPF ED+R++ FPS K + P E+Q A D L+
Sbjct: 405 VGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEEQLSAVDALIDS 460
Query: 440 LDLAPSGK-----GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
+ L + ++ PNP +R++ L ++ H PP+ + + +P
Sbjct: 461 MSLIKKDEERDTIEDLFPTSKIPNPQFQRYFQCLLHRALHPQEPLPPIQQHVLDMLDPPT 520
Query: 495 TLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSME 553
+ A+ Q + F + E K K + T + + + D +A S+
Sbjct: 521 EVTAKCQIPLSKIKTLFPLTEAIKRKAQVTAQDIFQDNHEDGTTTKKCKTEDGEAPMSIS 580
Query: 554 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYP 610
+ +G + P ++F ++ +++ + E++ +++ L++ ++N+ +
Sbjct: 581 RLAEGNITSVGSVNPAENFRVLVRQKNA------SFEEVSHQLINLIDQFLDTNDTPYFM 634
Query: 611 KAVELLVALRKGCI 624
K+V+ + A R+ +
Sbjct: 635 KSVDCIKAFREEAV 648
>gi|410223938|gb|JAA09188.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410261912|gb|JAA18922.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410342867|gb|JAA40380.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
Length = 732
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 151/676 (22%), Positives = 295/676 (43%), Gaps = 81/676 (11%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 ---------LIKKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 551
+ +SQ + F + E K + T + + + + D P ++ + S
Sbjct: 519 PAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFS 577
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 608
+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE
Sbjct: 578 VSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPY 631
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 632 FMKSIDCIRAFREEAI 647
>gi|403266933|ref|XP_003925612.1| PREDICTED: X-ray repair cross-complementing protein 5 [Saimiri
boliviensis boliviensis]
Length = 732
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 151/676 (22%), Positives = 295/676 (43%), Gaps = 81/676 (11%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSFPGEESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LI---------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
+ K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLDKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFLLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D + E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEILKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALNDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTNTLEDMFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNS 551
+ +SQ + F + E K + T + + + + D P + A S
Sbjct: 519 PTEVTKKSQIPLSKIKTLFPLIEAKKKDQVTAQDVFQD-NHEDGPTAKKLKTEEGGAHFS 577
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 608
+ S +V +G + P ++F ++ ++ + E+ N++ +E ++NE +
Sbjct: 578 LSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETLY 631
Query: 609 YPKAVELLVALRKGCI 624
+ K+++ + A R+ I
Sbjct: 632 FMKSMDCIRAFREEAI 647
>gi|242208290|ref|XP_002469996.1| predicted protein [Postia placenta Mad-698-R]
gi|220730896|gb|EED84746.1| predicted protein [Postia placenta Mad-698-R]
Length = 822
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 160/739 (21%), Positives = 290/739 (39%), Gaps = 131/739 (17%)
Query: 17 SMHSVLPDVEKLCSRLIQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI 75
++ V+ ++++ + + ++ G K + GVI FG+EET+N + ++ GGYE+V I
Sbjct: 37 ALQFVMLKIQEMAALTVATQIYNGRKTDQCGVITFGSEETDNIIHEKHGGYENVSEYIPI 96
Query: 76 KVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD 135
+ + L L T GD +DA++VG++ + + + L+TD P++
Sbjct: 97 GQPNAGTLAKLARLQPSTVIGDPIDALIVGIETQHQYLSSKKTWTRKMVLLTDGENPIEV 156
Query: 136 PDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT 195
D +++T+ + G+ + + G+ +++ N+ + +K +
Sbjct: 157 EDWEATVHKMNTVQIHLTVVGVDFDDEYLPFLEEGKSNIKRA--NEEFYHTLAKSMAHGI 214
Query: 196 L----FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLK 248
+ F S ++T+ T+ R GD++ E M+I V K T + + K
Sbjct: 215 VGNCDFALQELSRPDIKQTKSALLGTVLRIGDVDARPEEAMEILVKTSKATAIARPKSWK 274
Query: 249 KYSDKA-------------PSTDKFATHEVKVDYE---------------YKSVEDPSKV 280
K++ + T+ +A ++ Y Y+ +E +K
Sbjct: 275 KFARRQKEESQEEANIPLDEETEVYAQLHMRTQYMIEKQPPEGEEDQPPVYEQLEGITK- 333
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
E+ ++G++YG P ++E + + + + GF N R + M +V A
Sbjct: 334 ---EELVRGFKYGSSYAPCPGGQFE--RLPTRRGIDICGFFLEKNFRREWEMSEVTYVWA 388
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK------INIP 394
+P VA+SA+ +AM E +AI R R G +GVL P + EK +
Sbjct: 389 DPAQPLQQVALSAVVQAMYEKGAMAIARWASRDGMDP-KMGVLRPTMFEKADCFMWVQTV 447
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPS 445
+ + +PFA+DVR F F S + P ++Q EA ++ V +DL +
Sbjct: 448 EVNALSKMPFADDVRNFSFASLETLINKKGEVVTDHPYLPTDEQMEAMEHFVDAMDLMDA 507
Query: 446 GKGE-------ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPT 495
G+ + L+ NP + R H + ++ PP L K EP
Sbjct: 508 GEKDEEGNREPWFDTRLSYNPVIHRTKQAQFHAAIVADLNTHPLPPAHSELTKYFEPPKR 567
Query: 496 LLAESQSAIDAFCGQFVIKENPK----------------------LKKSTRRFLREKPSG 533
+L S+ AI+ F IKE PK L K RR L + S
Sbjct: 568 VLKRSRDAIEECKQVFKIKEVPKRVVQTRKDGHVRAGDEDEDMILLDKMPRRRLSKSASQ 627
Query: 534 SDEPNGDGSVSDAQAVNSMESKP------------------------------------V 557
+ S S +Q +S P
Sbjct: 628 FVASQQEASTSRSQVPRRKKSNPNDSATESETEDEDEELLLDKKQLPTPVPDADEGSDAA 687
Query: 558 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 617
T +G +P++DF+ +SR D V KA+ED+ I ++ + ++ +
Sbjct: 688 PTARIVGTESPLEDFKDNISRGDL---VTKAVEDLGAVIKEIVLRPFSARRTEEMLQCMQ 744
Query: 618 ALRKGCILEQVYLSVSFFL 636
LRK C+ E + + FL
Sbjct: 745 ELRKVCLEEDEVDAWNAFL 763
>gi|302917037|ref|XP_003052329.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733268|gb|EEU46616.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 694
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 229/517 (44%), Gaps = 47/517 (9%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ F T+ET+N+L + GYE++ VLQ++ + +++L+ + P T +GD + AI
Sbjct: 53 VGVVAFRTDETDNKLQDD-DGYENIAVLQELGPMSMSSLRNLQSVIKPSETWSGDAISAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM+ + + K + + LITD P+ + +++ Q+ G+ N
Sbjct: 112 VVAVDMM-DTFTKKLKWNRKIILITDGQGPMDADGLSDISKKMNDSNIQLTVLGVDFDNP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+P+ + E L + ++ ++ L R + + P + G
Sbjct: 171 DYGFKEEDKPNTKEENEKSLKLLVDDCQNGVFATIAEAIDELDTPR-IKSVKPYKTYDGT 229
Query: 223 LELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD----YEYK 272
L L + MKI V Y KT + T K+ T +T V+ D E+
Sbjct: 230 LTLGDPERFPSAMKINVERYFKTHLARPLTASTVVVKSEGTGSESTQAVEGDEMEGVEFS 289
Query: 273 SVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
+V DP + V E KG+ YG V IS +E K + +KS ++G
Sbjct: 290 AVRQARSYKVNDPDAPGGKRDVEFEDLAKGFEYGRTAVHISESEHNITKIETQKSFSIVG 349
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F S + +V + +A ++++ +A S+L A+ E+ I R V + G+ +
Sbjct: 350 FIPCSKYEPFLNLGEVCVTVASKFDAKSALAFSSLVWALSELESYGIARIVPKDGKDPQL 409
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQ 430
V ++ P V + + Y LPFAED+R +QFP + VS Q P ++
Sbjct: 410 V-LVAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVSGQTITKHRFLPTDELN 465
Query: 431 EAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDD 484
+A + V +DL+ G + +P E P NP + R H ++ ++ + + P
Sbjct: 466 DAMSDYVDAMDLSTYGIDDEGEPAEFAPIDDTFNPTIHRINHAVKSRAVYPEKPIPDTPS 525
Query: 485 SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
L + P L+ + QS ID+ +K+ P+ K+
Sbjct: 526 ILLRFASPPEDLIEKVQSKIDSLVEVADVKKVPEFKQ 562
>gi|157137679|ref|XP_001657128.1| ku P80 DNA helicase [Aedes aegypti]
gi|108880785|gb|EAT45010.1| AAEL003684-PA [Aedes aegypti]
Length = 675
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 153/625 (24%), Positives = 265/625 (42%), Gaps = 77/625 (12%)
Query: 1 MARTREALLLLLDVSPSM--------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR +E +++LDV + + S+++Q+K+ EVG++L GT
Sbjct: 1 MARNKEGCMIILDVGKDTLVKSGKHDQTFFERAKNCVSKIVQRKIFSKPQDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTCAGDFLDAIVVGVDMLIK 111
+ T N+L E GGY H+ ++ + +++ L K + GD+ DA+VV ++ L
Sbjct: 61 DGTNNQLNVEYGGYHHISEAFELNPSNWQMLRVLEKQVNASKVNGDWFDALVVAMNFL-- 118
Query: 112 KYGETYKGKKHLCLI-TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
K G K L +I AL + DV +Q+ ++ +++ + V+ S+
Sbjct: 119 KVGAQAKKFASLKIILVSALSVSSNLDV----EQMDSVVKKLTEMPCELN--VINDSVEH 172
Query: 171 EPHMRVIIENDNL----LNIFSKKS-------SAKTLFVDSTTSLRGARKTRDISPVTIF 219
+ DNL L IFS+K + + + D GA D + + +
Sbjct: 173 HADSDEQQDEDNLIFDALGIFSQKQQKTKEQRANEKMLSDIVFKSNGALCNIDSAELLLV 232
Query: 220 RGD------------LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ L + +++I + + EEK S K ST AT ++K
Sbjct: 233 HFEKKATRAAPWNSVLSIGTQIQISISAFLLITEEKGLG----SFKTESTYPEATVQLKT 288
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNI 326
DY +K+ D S E I GY YG VVP S + +K E+ + LGFT A NI
Sbjct: 289 DY-FKN--DQSFEPDYENVINGYMYGSTVVPYDSQ--IDIDYKSGEQRLSCLGFTVAGNI 343
Query: 327 LRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
L Y ++ +A + + ++AL +AM +++ V IV V+R+ + + VL P
Sbjct: 344 LEEYLCGTGTHVVVARKDCAASEAKLAALVKAMIDLDVVMIVTKVYRRDTRP-KINVLMP 402
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-----KML 440
++ F L F E+V +FP ++P + Q EA D L+
Sbjct: 403 TFKKRY---PCFIMLELCFQEEVALLKFPPL--LSNKYKPTDAQYEAVDKLIDSMDLMDA 457
Query: 441 DLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 500
+G E T NP + Y + ++ H A P +D LK + + P + S
Sbjct: 458 LDDDTGSREAFALHKTLNPIHQHMYRTVAHRALHPKAPIPAMDKELKNLVDVPPKVRERS 517
Query: 501 QSAIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
+ +D F +KE N +LK R + N D + + N +++
Sbjct: 518 KPILDEVKNLFPLKEIKVNARLKWLQR-------ANKITANLDATAAGTSQQNPTDAEEE 570
Query: 558 V----TVDKIGDLTPIQDFEAMMSR 578
+ T+ ++G +TP +DF ++ R
Sbjct: 571 LDDQRTIVEVGTVTPAEDFALLLKR 595
>gi|367050686|ref|XP_003655722.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
gi|347002986|gb|AEO69386.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
Length = 721
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 151/641 (23%), Positives = 267/641 (41%), Gaps = 89/641 (13%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K +GV+ TEET N +E + GY+H+ VLQ+I ++ L+ L P + GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDREGLEGYDHISVLQEIGPASMSTLRDLRSLIQPSRSNGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ A+VV + M I+++ + K + + L+T+A P+ D + +++ ++V G+
Sbjct: 109 AISAVVVALSM-IEEFTKKLKYNRRIILVTNAESPIDDESLEDVASRLNESNIELVVIGI 167
Query: 158 RMKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ RA + E +R +++ + + + + L + +
Sbjct: 168 DFDDPEYGFKEEDKSRAKAANEKTLRKLVDQCSNGVFGTMAQAVEELAIP---------R 218
Query: 210 TRDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + P + G L L + K I V Y KT P A T
Sbjct: 219 IKPVRPFKAYDGPLTLGDPSKYESALSIHVERYFKTKRAMAPAASTVVVNAERVGPSQTQ 278
Query: 264 EVKVDYEYKS-------------VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWE 305
+ D E V DP + V E KGY+YG VVP S ++
Sbjct: 279 ALDEDIEMGGTGFSGVKQMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDLS 338
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
K + +KS +LGF + + M + + +A+ N +A + +SAL + E+ A
Sbjct: 339 VTKLETKKSFTILGFVPSRSYNFFLNMGETGVIVAQKHNEQAELGLSALIHTLHELESYA 398
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FPV 421
+ R V + G Q + +L PN + + D F Y LPFAEDVR +QFP K V
Sbjct: 399 VARYVQKDGAQPQIF-MLKPNPA----LEDEFECLYDVPLPFAEDVRSYQFPPLDKVLTV 453
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTP----------NPALER 463
+ P+E ++A + V +DL+ G + E P NP + R
Sbjct: 454 TGNVIKEHRLLPSEDLKQAMSDFVDAMDLS----GFEVDDEGNPTEYASIDELYNPIIHR 509
Query: 464 FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST 523
+ ++ + D + L + ++P L+ +++S I+A IK+ P K
Sbjct: 510 LNQAIRARAVNPDGPIESPAEILLRFSKPPEKLIKKAKSEIEALADAAEIKKVPA-KAQG 568
Query: 524 RRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
RR G EP S D A+ + ++++ I +F+ M++
Sbjct: 569 RR-------GRKEPVKPLSGLDIDALLGESKRTTISLE-----NAIPEFKQMLATAADDA 616
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
V+ A + M + + L+ +S ++Y +A E L +R+ I
Sbjct: 617 TVENAAKQMGDIVRKLVRDSFADLSYARAAENLRVMREELI 657
>gi|159032989|gb|ABW87766.1| ATP-dependent DNA helicase II [Cryphonectria parasitica]
Length = 729
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 156/644 (24%), Positives = 276/644 (42%), Gaps = 73/644 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HL-PQGTCAGDFLDAI 102
VGV+ T+ TEN+ GYE++ V +++ V +Q LK H+ P T GD + A+
Sbjct: 53 VGVVGLRTDVTENQYVDN-EGYENICVFKELGPVSLQDMQQLKTHIKPSQTVNGDAMSAV 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV +M++ + + K + + L+TD + + D + ++++ I G+ +
Sbjct: 112 VVASEMIVA-FTKQNKWDRKVYLVTDGMGAIDDDGIDDIANRLNDIGIAFTIIGVDFDD- 169
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFR 220
E + N+ L F K + +F ++ G K R V +
Sbjct: 170 -PEYGFKEEDKSSLKASNERTLKAFVDKCD-RGVFATMAEAIEGLAIPKPRFTKLVRSYD 227
Query: 221 GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--------DKFAT----HE---- 264
G L L + + KT +++P KK S ++ +T D +T HE
Sbjct: 228 GPLTLGDPENFPSAI--KTYVDRWPVTKKSSAESATTVVLKSGSLDTQSTMTLDHEMEGF 285
Query: 265 ---------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
VK YK V DP + V E KGY YG + ++ AEW+ K
Sbjct: 286 ENGGPSLSSVKQHRTYK-VNDPGAPGGKRDVEFETLAKGYTYGSTAIHVAEAEWDITKLD 344
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K ++GF + M + ++ +A+P + + VA+SAL A+ E+ A+ R V
Sbjct: 345 TTKGFSIIGFIANEKVEPFVAMAETSVTVAKPFDETSQVALSALIHALHELEHCAVARLV 404
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV--------- 421
+ G+ V++ +L P V I + Y LPFAED R+++FP K
Sbjct: 405 VKDGKDPVIL-LLKPCVDVDI---ECLYDVPLPFAEDTRQYRFPPLDKVITITGKTLTEH 460
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQ-PELTP-----NPALERFYHHLELKSEHQ 475
+ P++ + A + V +D++ G+ + E P +P + R + ++ +
Sbjct: 461 RFLPDKNLKRAMSDFVDAMDISEFGRDDDGNSAEYAPLDDLYSPIIHRVNQAIRARAVDE 520
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
A P+ L K + P LL + I+A +K+ P+ K R+ SG +
Sbjct: 521 QGAVEPIPPVLLKYSRPPEKLLKRANPEIEALIEAADVKKAPEKLKGKRK----GESGQE 576
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM---MSRRDCPDWVDKAIEDM 592
G + A + + E K V KI I DF+ + ++ + + ++ A++DM
Sbjct: 577 TRAISGFDAGASILAAREKKKV----KISKENAIPDFKQLLRSLATVNTDEAIETAMKDM 632
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCI-LEQVYLSVSFF 635
+F L++ S NY +A+E + +R+ + LE L SF
Sbjct: 633 AQIVFSLIKESFGDRNYDQALENIGVMREQMVGLESPKLYNSFL 676
>gi|317030003|ref|XP_001391676.2| ATP-dependent DNA helicase II subunit 2 [Aspergillus niger CBS
513.88]
Length = 714
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 151/635 (23%), Positives = 266/635 (41%), Gaps = 95/635 (14%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GV+ T+ET NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR---- 150
A+V+ + M+I + + K K+ + L+T+ P+ ++ KED + I
Sbjct: 109 SALVLAIQMIITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDF 167
Query: 151 QMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
+G++ ++ R + EN+ LL ++ ++ + +
Sbjct: 168 DDPEYGVKEEDKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRV 216
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE------ 264
+ F+G L+L + V + E++ + Y KAPS +F
Sbjct: 217 KTTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGM 272
Query: 265 ---------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
V+ + Y+ + E+ + V EQ KGY YG +VPIS +
Sbjct: 273 AAAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDEN 332
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
+ +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A
Sbjct: 333 ITTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYA 392
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVS 422
+ R V ++ + V+V VL P++ PD LPFAEDVR ++FP + VS
Sbjct: 393 VARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVS 446
Query: 423 WQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLEL 470
+ PN+ A D VK ++L + E L + + +P L R +
Sbjct: 447 GKVVTQHRNLPNDDLLNAMDKYVKSMELTDMDENGDPTESLPIDDSFSPVLHRIDSAIRH 506
Query: 471 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR-E 529
++ H + PP L K + P L+ +S+ +D +K+ P K T+R E
Sbjct: 507 RAIHPNDPIPPPASVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKRTRETE 566
Query: 530 KPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAI 589
KP S D A+ E + KI I +F+ +S+ + + + A+
Sbjct: 567 KPL---------SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIEIIKDAV 612
Query: 590 EDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ M I + +S +NY + E L +R+ I
Sbjct: 613 KQMSTIIEDQIRHSLGDVNYHRVTEGLGVMREELI 647
>gi|336378342|gb|EGO19500.1| hypothetical protein SERLADRAFT_363906 [Serpula lacrymans var.
lacrymans S7.9]
Length = 811
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 136/558 (24%), Positives = 241/558 (43%), Gaps = 79/558 (14%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GVI+FG+E+T+N + + GGYEHV + + + L L
Sbjct: 36 IQEMIFNGRKTDQCGVIVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSP 95
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
GD +DA++VG++ + + + L+TD P++ D ++ +++
Sbjct: 96 SEVTGDPVDALIVGIETQDQYLSSKRTWTRKIVLLTDGENPIEIEDWEATVQKMDSLSIA 155
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+ G+ + L E + I+ +N L + K +++ V T +L +R
Sbjct: 156 LTVVGVDFDD----EELPFEEENKSTIKAENEL-FYKKLTTSLQSGVMGTCALALQEISR 210
Query: 212 -DISPV------TIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS----- 256
+I V T+ R GD++ E +++ V K T + KK++ +
Sbjct: 211 PEIKQVKSTLMGTVIRLGDVDGRPDEAIEVLVKASKCTALTRPKGWKKFASRQAGDDEYE 270
Query: 257 --------TDKFATHEVKVDYEYKSV-------------------EDPSKVVPPEQRIKG 289
T FA +++ +Y ++ S+ V EQ I+G
Sbjct: 271 GGEEDEDRTVSFAQLKMRTEYYIDHGEHEDEDDESEDGDKSPTGKDENSEKVEKEQLIRG 330
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 349
++YG P ++ + +K + + GF A N R M +V A+P +++ V
Sbjct: 331 FKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQYIWADPSSAQQQV 388
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S++ +AM E + +AI R V + G +GVL P+V +KI D + +PFA+DVR
Sbjct: 389 ALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCLLWVQMPFADDVR 444
Query: 410 EFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE-------IL 451
++ F S K P + P + Q A +N V +DL +G +
Sbjct: 445 KYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAGDKDEEGNRYPWF 502
Query: 452 QPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
L+ NPA+ R +H + + PPP + LK EP +L ++ AI+
Sbjct: 503 DTRLSYNPAVHRTKQALFHSAVVNDLITNPIPPPHPELLKYF-EPPKKVLKRARDAIEDC 561
Query: 508 CGQFVIKENPKLKKSTRR 525
F +KE PK R+
Sbjct: 562 KQAFKVKEVPKKVARARK 579
>gi|170050849|ref|XP_001861497.1| ku P80 DNA helicase [Culex quinquefasciatus]
gi|167872299|gb|EDS35682.1| ku P80 DNA helicase [Culex quinquefasciatus]
Length = 722
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 151/625 (24%), Positives = 269/625 (43%), Gaps = 77/625 (12%)
Query: 1 MARTREALLLLLDVSPSMH--------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MART+EA +L+LDV + + ++++Q+K+ + EVG++L GT
Sbjct: 1 MARTKEACILILDVGKDTLVKSGKNDLTFFERAKGCVTKIVQRKIFSKPHDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
++T N+L E GGYEH+ ++ + +++ L+ Q ++ DA++V + L
Sbjct: 61 DDTSNQLNVECGGYEHIAEAFELGPSNWKMLRILESRIQPSKVNANWFDALLVATNFL-- 118
Query: 112 KYGETYKGKKHLCLI-TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
K G K L +I L + + + G + V + + N+ +A
Sbjct: 119 KVGAQAKKFATLKIILISKLSGVVELEAGELDSFVDKLTNMPCELNIINDNVEHQAGSDE 178
Query: 171 EPHMRVIIENDNL----LNIFSKKSSA-------KTLFVDSTTSLRGARKTRDISPVTIF 219
+ E D L L IFS++ + + L D GA D + + +
Sbjct: 179 Q-------EEDGLGFDALGIFSQRGNRSKEQRKNEKLLADIVFKSNGALCNIDSAELLLV 231
Query: 220 RGD------------LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+ L + K++I Y EEK + S K D A ++K
Sbjct: 232 HFERKVTRSMPWNCMLTIGSKLQISTSTYVLISEEKGLS----SFKTECVDPNAVVKLKT 287
Query: 268 DYEYKSVEDPSKVVPP--EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
D+ +K+ K+ P E IKGY YG VVP S + + E+ + LGFT A N
Sbjct: 288 DH-FKN----DKLYEPDFEDLIKGYMYGSTVVPYDS-QMDFDYKSGEQCLSCLGFTAAGN 341
Query: 326 ILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
IL Y ++ +A+ + + ++AL +AM E++ V I V+R+ + + L
Sbjct: 342 ILEEYLCGTGTHVVVAKKDCAASEAKLTALIKAMLELDVVMIATKVYRRDTKP-KIQALF 400
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA- 443
P + L F E+V +FP +P + Q EA D L+ +DL
Sbjct: 401 PTFRRRF---PCLTMLELVFQEEVALLKFPPL--LSNRHKPTDAQYEAVDKLIDAMDLMD 455
Query: 444 ----PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 499
+G E T NP + Y + ++ H A P +D+ L+++ + +
Sbjct: 456 GLDDETGSKEAFALHKTLNPIHQHMYRTVAHRAIHPKAPLPAMDEELRQLVDVPSKIRER 515
Query: 500 SQSAIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
S+ A++ F +KE N +LK +L++ + +P+GD + S +Q + +
Sbjct: 516 SKEALEDIKNLFPLKELKVNAQLK-----WLQKTAKINVQPDGDAAGSSSQPNDGSADEE 570
Query: 557 V---VTVDKIGDLTPIQDFEAMMSR 578
+ TV ++G +TP +DF ++ R
Sbjct: 571 LDDHRTVVEVGTVTPAEDFALLLKR 595
>gi|442762071|gb|JAA73194.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen, partial [Ixodes ricinus]
Length = 637
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 146/598 (24%), Positives = 256/598 (42%), Gaps = 92/598 (15%)
Query: 92 GTCAGDFLDAIVVGVDMLIKK-YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTI 148
G+ DFLDA++V +D++ K+ G+ ++ KKH+ + TD P KD D+ T + S I
Sbjct: 7 GSQQADFLDALIVCMDVIQKETVGKKFE-KKHIEVFTDLSSPFSKDQLDIITHNLRKSNI 65
Query: 149 ARQMV---------AFGLR---------------MKNIV------------VRASLSGEP 172
+ Q G R +K I V SL GE
Sbjct: 66 SLQFFLPIQADKEDGTGDRGDSNLHSDHCRPSFPLKGITEQQEEGIQMVKQVMMSLEGE- 124
Query: 173 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKI 231
D L I+S S + L + + I+ +I +R L + + I
Sbjct: 125 --------DGLDEIYSFSESLRQLCI-----------FKKIARSSIPWRCQLTIGSNLSI 165
Query: 232 KVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYR 291
++ YK +EK T D +++ + Y +D VP E I+G+R
Sbjct: 166 EILAYKSIVQEKVKTSWTVVD----ARTLRKEDIQKETVYCLNDDDETEVPKEDTIQGFR 221
Query: 292 YGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATV 349
YG ++P S + E +K+K E K +LGF +S + R Y+M + L + A G+ A V
Sbjct: 222 YGSDIIPFSKVDQEQMKYKSEGKCFSVLGFCRSSQVHRKYFMGNQVLKVFAAKGDEAAAV 281
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+S+L A+ E++ VAIVR + + + + VGV P++ + + + LPF ED+R
Sbjct: 282 ALSSLIHALDELDMVAIVRYAYDR-RTNPQVGVAFPHIKDTY---ECLVYVQLPFMEDLR 337
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERF 464
++ F S + P E Q A D L+ + L + E +L PNP +R
Sbjct: 338 QYMFSSLKN--NKYTPTEVQLSAVDALIDSMSLMKKEEEEDTIKDLFPTTKIPNPQFQRL 395
Query: 465 YHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTR 524
+ L ++ H PP+ + + +P + A+ Q + F + E K K
Sbjct: 396 FQCLLHRALHPQEHLPPVQQHVLNMLDPSTEVTAKCQIPLSEIKALFPLTEVIKRKNQLT 455
Query: 525 R---FLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDC 581
F GS+ + + A S + V++ K+G ++P +DF ++ ++
Sbjct: 456 AQDIFQDNHEEGSN--SKKFKTEEGGAHFSFSNLAKVSITKVGSVSPAEDFRVLVRQKSA 513
Query: 582 PDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+ E++ ++ +E ++NE + K+++ + A R+ I Y + FL
Sbjct: 514 ------SFEEVSLQLINHIEQFLDTNETPYFMKSMDCIRAFREEAIQFSEYQCFNNFL 565
>gi|390464792|ref|XP_002749807.2| PREDICTED: X-ray repair cross-complementing protein 5 [Callithrix
jacchus]
Length = 779
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 149/672 (22%), Positives = 293/672 (43%), Gaps = 81/672 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 53 NKAAVVLCMDVGFTMSNSFPGEESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 112
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI--- 110
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D++
Sbjct: 113 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 169
Query: 111 ------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
K++ E + K L +I +L C + K+ G + D
Sbjct: 170 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLDKEGGSGDRGDGP 229
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ +F L+ + L + + +E D L I+S S + L V
Sbjct: 230 FLLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 283
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 284 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 334
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D + E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 335 DIQKETVYCLNDDDETEILKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 394
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 395 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALNDLDMVAIVRYAYDK-RANPQVG 453
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 454 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 509
Query: 442 LAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
LA + ++ PNP +R + L ++ H PP+ + + P +
Sbjct: 510 LAKKDEKTNTLEDMFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPTEV 569
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMESK 555
+SQ + F + E K + + + + + D P + A S+ S
Sbjct: 570 TKKSQIPLSKIKTLFPLIEAKKKDQVIAQDVFQD-NHEDGPTAKKLKTEEGGAHFSISSL 628
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKA 612
+V +G + P ++F ++ ++ + E+ N++ +E ++NE + + K+
Sbjct: 629 AEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETLYFMKS 682
Query: 613 VELLVALRKGCI 624
++ + A R+ I
Sbjct: 683 MDCIRAFREEAI 694
>gi|358391859|gb|EHK41263.1| hypothetical protein TRIATDRAFT_295201 [Trichoderma atroviride IMI
206040]
Length = 689
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 267/610 (43%), Gaps = 68/610 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDFLDAI 102
VGV+ T+ET + L ++ GY+H+ +LQ + + +++L K P T GD + AI
Sbjct: 53 VGVVGLRTDETSHTLAED--GYDHISILQPLGPMSMSGLKTLQPKIQPSKTTEGDAISAI 110
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDAL-CPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 161
V+ VDM I + + K K+ +CL+TD L PD G KE+ + +Q +K
Sbjct: 111 VIAVDM-IDTFTKKNKWKRQICLVTDVLGVDFDAPDYGYKEEDKPAVKKQNEE---TLKK 166
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+V + I+E + +N KS D + +L + + V + R
Sbjct: 167 LV--DGCGEDARFASIVEAIDDMNEPRAKSVKPYKTYDGSLTLGDPKNAPAVVEVRVERY 224
Query: 222 -DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS-- 278
L+ + V K+ E+ P+ ++ + A VK YK V DP
Sbjct: 225 FKTHLARPVTASTVVVKE--EQAGPSQAADDEQMEGVELTA---VKQSRTYK-VNDPDAP 278
Query: 279 ---KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
+ V E KGY YG V IS ++ K + +KS K++GF + +
Sbjct: 279 GGKRDVEFESLAKGYEYGRTAVHISESDHNVTKLQTQKSFKIIGFIPKEKYEPLLNLGES 338
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV---LTPNVSEKIN 392
+ IA + ++ +A S+L A+ E++ A+ R V + + ++V + L PN + +
Sbjct: 339 CVTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEKDPIMVLLMPYLEPNYACLYD 398
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLA 443
+P LPFAEDVR +QFP + +S Q P+++ +A + V +D++
Sbjct: 399 VP-------LPFAEDVRSYQFPPLDRVVTISGQTITKHRLLPSDELSQAMSDYVDAMDIS 451
Query: 444 PSGKGEILQP------ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
G + +P + NPA+ R H ++ ++ H + P + L + P L+
Sbjct: 452 NYGIDQDGEPAEYATIDEIYNPAIHRINHAIKQRAVHPERPVPEIPPVLLRFAAPPTELV 511
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
Q+ ID+ +K+ P K R+ KP ++ ++ +
Sbjct: 512 ETVQATIDSLIKAADVKKVPPKAKGKRQREAVKP-----------------ISGLDVDAL 554
Query: 558 VTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 614
+ +K G ++P I DF+ ++ + + + A + M + L+ +S Y +A+E
Sbjct: 555 LGGEKKGSISPENAIPDFKRALNSSEEVEQIADATKQMGAIVQSLITDSFGDNKYAQAME 614
Query: 615 LLVALRKGCI 624
+ +R+ I
Sbjct: 615 SIGVMREELI 624
>gi|336469609|gb|EGO57771.1| protein Ku80 [Neurospora tetrasperma FGSC 2508]
Length = 725
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 261/605 (43%), Gaps = 62/605 (10%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VL+++ + ++ LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ P E P NP + + ++ + DA PP+ + L + T P L+A+++
Sbjct: 487 DDDGHPAEYAPVDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLIAKAK 546
Query: 502 SAIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVT 559
+ ID +K+ PK++ R KP SG D D + + + + P+++
Sbjct: 547 TEIDGLIKAAEVKKVPPKVQGKRGRKDTVKPLSGLD---IDALLGETRP--RTKKTPIIS 601
Query: 560 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 619
+ I +F+ ++ + + ++ A + M N I L+ +S + YP+A E L +
Sbjct: 602 TENA-----IPEFKQILETAEDDETIETAAKQMGNIICKLVSDSFADVLYPRAAENLRVM 656
Query: 620 RKGCI 624
R+ I
Sbjct: 657 REELI 661
>gi|358378936|gb|EHK16617.1| hypothetical protein TRIVIDRAFT_232258 [Trichoderma virens Gv29-8]
Length = 714
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 151/627 (24%), Positives = 265/627 (42%), Gaps = 83/627 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
VGV+ F T+ET + L ++ GYE++ +LQ + + + SLK+L P T GD +
Sbjct: 53 VGVVGFRTDETNHTLGED--GYENISILQPLGPM---TMTSLKNLQSKVKPSRTVEGDAI 107
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
AIVV VDM I Y + K K+ +CL+TD + D+ ++ ++ G+
Sbjct: 108 SAIVVAVDM-IDTYTKKNKWKRQICLVTDGHGEIDPDDIDDISRKICDSNIELTVLGVDF 166
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR--DISPVT 217
E V +N+ L + F ++ + R + P
Sbjct: 167 D--APDYGFKEEDKSLVKKQNEQTLKRLVDGCGQDSRFASIVEAIDDMNEPRAKSVKPYK 224
Query: 218 IFRGDLELSEK------MKIKVWVYKKTGEEKFPTLK----KYSDKAPS-------TDKF 260
+ G L L + + I+V Y KT + PT K PS D
Sbjct: 225 TYDGLLTLGDPKNAPAVVDIRVERYFKTHLARPPTASTVVVKEEQAGPSEAADEEQMDGV 284
Query: 261 ATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
VK YK V DP + V E KGY YG V IS ++ K + +KS
Sbjct: 285 ELTAVKQARTYK-VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESDHNVTKLETQKSF 343
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
K++GF + + + IA + ++ +A S+L A+ E++ A+ R V + +
Sbjct: 344 KIIGFVQKEKYELLLNLGETCVTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEK 403
Query: 376 QSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ ++V + + PN ++P LPFAED+R +QFP + VS Q
Sbjct: 404 EPIMVLLMPHMEPNYVCLYDVP-------LPFAEDIRTYQFPPLDRVVTVSGQTLTSHRL 456
Query: 425 -PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQDA 477
P+++ +A + V +D++ G E +P E NPA+ R H ++ ++ H +
Sbjct: 457 LPSDELNQAMSDYVDAMDISTYGIDEEGEPAEYATIEEIYNPAIHRTNHAIKQRAVHPEK 516
Query: 478 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP 537
P + L + P L+ Q+ ID+ +K+ P K R+ KP
Sbjct: 517 PVPEIPPVLLRFAAPPTELVETVQAKIDSLVQAADVKKVPPKAKGKRQRETVKP------ 570
Query: 538 NGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKN 594
++ ++ ++ +K G ++P I DF+ ++ + + + A + M
Sbjct: 571 -----------ISGLDVDALLGEEKKGSISPENAIPDFKRALNSSEEVEQIADATKQMAA 619
Query: 595 KIFGLLENSNEGINYPKAVELLVALRK 621
+ L+ +S Y +A+E + A+R+
Sbjct: 620 IVRSLVTDSFGDSKYAQAMEGIGAMRE 646
>gi|156051442|ref|XP_001591682.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980]
gi|154704906|gb|EDO04645.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 705
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 162/632 (25%), Positives = 276/632 (43%), Gaps = 85/632 (13%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET N+L + GYE++ VL+ + ++ ++ + P GT AGD
Sbjct: 49 KTDGVGIVGFRTDETNNDLQRSGEQGYENISVLKPLGQFQMTDLEEMQEVIKPNGTEAGD 108
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ A+VV V+M+ + K G+ K + + L+TD + ++ ++S ++V
Sbjct: 109 AVSAVVVAVEMIKEHTTLKSGKPGKFARKIVLVTDGKGFMHGEELDDIAKEISRNDIKLV 168
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 208
G+ + E V EN+ LL F++ S +F ++ +
Sbjct: 169 VIGVDFDD--AEFGFKEEDKDLVKAENEKLLRSFTE-SCLDGIFGTIAEAIEALATPVVK 225
Query: 209 KTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY----SDKAPST 257
TR+ + T G L L + K I V Y KT + K + + Y ++ P
Sbjct: 226 VTREYNTYT---GPLTLGDPTKYPETAVSIDVARYFKTHQAKPVSARSYVEAGDEELPDA 282
Query: 258 DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
D + VK YK V DP+ + V + KGY YG +V IS A+ K +
Sbjct: 283 DDLTS--VKQTRTYK-VNDPTAPGGKRDVERDDLEKGYEYGSTIVHISQADEGVTKLQAI 339
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
K ++GF +N R+ M + + I + N +A +A+S+ A+ E+N A+ R V +
Sbjct: 340 KDFSIIGFV-PNNYERYLNMGESCITIPQKTNEKARMALSSFVHALNELNSCAVARIVKK 398
Query: 373 QGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 424
G ++V + + P++ +++P LPFAEDVR ++F K F S
Sbjct: 399 DGADPLIVILAPFIEPDLEGLVDVP-------LPFAEDVRSYRFAPLDKVFNSSGGLMEK 451
Query: 425 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEH 474
P++ + A + V +DL+ +GK E P E T +P L R + ++
Sbjct: 452 HKNLPSKDLKAAMSSFVDSMDLSTAGKDEAGDPVEYMAIEDTYSPVLHRINQAIRRRAVK 511
Query: 475 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE--KPS 532
D PP D L K + P L+ +S S + E +KK+ + RE KP
Sbjct: 512 PDEGVPPPPDVLIKWSHPPSELVEKSSSQLTKLI------ETADVKKAKAKRNREVVKPL 565
Query: 533 GSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 592
S D +A+ E + +TVD I +F+ ++ D + V K +M
Sbjct: 566 ---------SGLDVEALLGREKRQKITVD-----NAIPEFKRTLASTDSTESVTKVTREM 611
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ + LL+ S + +A E L +R I
Sbjct: 612 GDTVRTLLKRSTGNSTWAQAEEYLRVMRTELI 643
>gi|390369106|ref|XP_797768.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 213/472 (45%), Gaps = 59/472 (12%)
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV 233
M ++ E + + F + A T+F + R + P T ++ +LE+ ++KI V
Sbjct: 139 MNIVEEVNGCIYSFDEVIPAVTMF-----------EKRAVRP-TPWKVNLEIGSELKIPV 186
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
Y K E + K K +F ++ + +D V E +++GYRYG
Sbjct: 187 SGYLKVKEATAKSWKSTFQKGHR--EFTPQTIRSKH---LNDDEETEVEKEDQVEGYRYG 241
Query: 294 PQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAV 351
++PIS + + + +K P K +++LGFT S I +H + + V +F A+P + A ++
Sbjct: 242 NDIIPISEEDKKNMDYKKPGKVMQVLGFTKDSKIKKHQQIGNSVYIFYAQPDDQAAAMSF 301
Query: 352 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 411
SAL A+ E N VAIVR + G + +G L P++ K N FY LPFAED+R +
Sbjct: 302 SALVNALYETNSVAIVRRAY-SGSSAPRIGFLAPHI--KANYEALFYIE-LPFAEDLRMY 357
Query: 412 QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS-----GKGEILQPELTPNPALERFYH 466
F S QP+E+Q A D+L+ +DL + G E L+P+ T NP +R
Sbjct: 358 TFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLMTAEEDEDGDTEALKPKNTLNPYTQRLCQ 416
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
L ++ + D P ++ ++ +P C ++ P ++ + F
Sbjct: 417 CLMHRALNPDDPIPGIETAIATYLQP---------------CRAVAVQCEPDVEAMQKLF 461
Query: 527 LREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVD-------------KIGDLTPI-QDF 572
EK + GD + + ++ VD IG +T + DF
Sbjct: 462 KLEKAKAKENVTGDSIWKASDGGDGEPARKKAKVDDEVNGGDLSMAGMAIGVVTEVFGDF 521
Query: 573 EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+A++S++D D +A M +I L++ S Y KA++ L R+ I
Sbjct: 522 KAIISQKD-EDRFKEAAGQMGKRILQLVKESFGSQLYGKALDCLRVYREQAI 572
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT 93
+ N++ Y+++ V + ++ D L+Q ++ Q +
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQAS 96
>gi|50551937|ref|XP_503443.1| YALI0E02068p [Yarrowia lipolytica]
gi|74634055|sp|Q6C7B9.1|KU80_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|49649312|emb|CAG79022.1| YALI0E02068p [Yarrowia lipolytica CLIB122]
Length = 726
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 236/525 (44%), Gaps = 55/525 (10%)
Query: 33 IQKKLIYGKNHEV-GVILFGTEETENELTKEVGGYEHVKVLQDIKVVD-GHLVQSLKHL- 89
I K++ G+ +V G++ T+ T+N + +E G+EH+ ++ I+ + L+++ K L
Sbjct: 44 ISNKILSGRKTDVVGLVGVHTDTTQN-MFEEESGFEHIDIITPIQQFNLDTLLEAKKQLV 102
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P GD + IVV V M IK Y + K +++ ++T+ + D G Q++
Sbjct: 103 PNSDNKGDLISGIVVAVQM-IKLYTKALKYIRNIVVLTNGQGNMNLGDSGGIIKQLNENR 161
Query: 150 RQMVAFGLRMKNIVVRASLSGEP-HMRVIIENDNLLNIFSKK--SSAKTLFVDSTTSLRG 206
+ G+ + V +P H R EN+ L F + S + ++ SL
Sbjct: 162 IILKVMGVDFDDEEVDYFEEDKPEHKR---ENELKLKEFVDRCEDSVFATYKEARDSL-D 217
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-- 264
K + ++PV F+G+L LS+ + G E FP ++ + S+ + E
Sbjct: 218 IPKVKAVNPVRAFQGNLVLSDPEQQPPQRVMSIGVEVFPCTRRATAMTASSYAMSKIEPA 277
Query: 265 ------------VKVDYEYKSVEDPSKVVPPEQRIK-----GYRYGPQVVPISSAEWEAV 307
VK D +Y V D S + ++ + GYRYG ++V I+ E EA+
Sbjct: 278 TISTPSQNNLQAVKWDRQY-YVNDESGIGGKKELDRDTLENGYRYGSEIVYITKEEEEAI 336
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
F S++++GF + ++ + M + I + GN+R VA+SA ARA+ E + +
Sbjct: 337 MFPTSASLQVIGFVNKKSVPPYMLMGHTDYIIGQRGNNRDAVAISAFARALFETDNFGLA 396
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV------ 421
R V + G+ +V VL P + ++ + F LPFAED R+F PS +
Sbjct: 397 RYVNKDGKDPQIV-VLMPYIRAEL---EGLVFCQLPFAEDERKFILPSLTSLETRSGNKT 452
Query: 422 -----SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE------L 470
P ++ +A D+ V +DL+ KGE +P LT HH+
Sbjct: 453 VTTHSRLLPTKEMLDAMDDYVDAMDLSKL-KGEDDEPWLTMEECFNPSIHHIRNVVKECA 511
Query: 471 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
S+ P PL L + ++P L E++ ++ F IKE
Sbjct: 512 VSQDYGKIPEPL-PILTRFSQPAEELTEEAKPQLELLKHLFDIKE 555
>gi|322707314|gb|EFY98893.1| ATP-dependent DNA helicase II subunit 2 [Metarhizium anisopliae
ARSEF 23]
Length = 688
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 162/674 (24%), Positives = 279/674 (41%), Gaps = 112/674 (16%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWAMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
N L ++ GYE++ V+Q++ + +++LK P T +GD + AIVV +D LI +
Sbjct: 64 NNRL-QDGDGYENISVIQELSQITMSGLRALKASVKPNETMSGDAVSAIVVAID-LIGTF 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K +++ L+TD + D+ +++ ++ G+ N +P
Sbjct: 122 TKKLKWIRNIVLVTDGQGDMDADDIEDIAKKINDSGIKLTVLGVDFDNPAYGFKEEDKPP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ E+ I + ++ L R + + P + G L L +
Sbjct: 182 TKATSEHTLKALINQCEGGTFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPA 240
Query: 228 KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
M I V Y KT E+ + + D +F+ VK YK
Sbjct: 241 AMNINVERYFKTHLARPLTASTVVVKSEQATQSTQTLEDDPMDGIEFSA--VKQARTYK- 297
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V DP + V E KGY YG V IS +E K + EKS ++GF +
Sbjct: 298 VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWTKYEP 357
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M +V + A ++++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P +
Sbjct: 358 FLNMGEVCVTHARKNDTKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLE 416
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 439
+ + FY LPFAEDVR +QFP + VS Q P+++ +A + V
Sbjct: 417 LGL---ECFYDIPLPFAEDVRSYQFPPLDRVITVSGQTLKTHRLLPSDELAKAMSDYVDA 473
Query: 440 LDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
+DLA G+ E P + T NPA+ R + +++++ H D P
Sbjct: 474 MDLATYGQDEEGNPAEYASIDETFNPAIHRVNNAVKMRAAHPDKPVP------------- 520
Query: 494 PTLLAESQSAIDAFCGQFVIKENPKL-KKSTRRFLRE--KPSGSDEPNGDGSVSDAQAVN 550
E P + K+ R RE KP S D A+
Sbjct: 521 ---------------------ETPAIPPKAKGRRTRETVKPI---------SGLDVDALL 550
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 610
++K V+ + P+ DF+ + D D ++ A + M N + L+ +S Y
Sbjct: 551 GEDTKRTVSEE-----NPVPDFKRALGTADEMDQIEDAAKQMGNIVRSLITDSFGDSKYA 605
Query: 611 KAVELLVALRKGCI 624
+A E L +R+ I
Sbjct: 606 QATECLGVMREELI 619
>gi|193613368|ref|XP_001944675.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 665
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 150/637 (23%), Positives = 285/637 (44%), Gaps = 76/637 (11%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHE-VGVILFGTEE 54
A +E ++L +DV + + D + KLC+ +I ++ I+ ++ + V +ILFG+ +
Sbjct: 3 ANKKEVIILAIDVGINSLKLDSDGKTYFEKSKLCASMILRRKIFAESKDYVALILFGSNQ 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFLDAIVVGVDMLIKKY 113
T+N L + G +++++ + VV L++ + L P D+L+ +V+ DM K+
Sbjct: 63 TKNHLASQ--GCNNIEIVTSLGVVTWDLIKHIDSLSPSDITRSDWLNTLVLAADMAKKEI 120
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ + + T+ + + + T + G ++ V+R+S+
Sbjct: 121 QDKIFQDLQIVMFTNLATDISFDKIDIIARCIQTQRIDLTIIGTDCED-VLRSSV----- 174
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV 233
L F +K+ A T+ +DS K ++++P + L IKV
Sbjct: 175 ----------LETFIRKTEATTVSLDSVLPNICNYKLKEVTPRA-WNVPLSFGNVFNIKV 223
Query: 234 WVYKKTGEE----KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIK 288
YKK E K+ + Y + D + Y Y V++ ++ V E I
Sbjct: 224 IGYKKIDETPKSFKWSLCRNYD----TPDSITEMNKRTTYSY--VDNGEQIEVDHENIID 277
Query: 289 GYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
G+R+G ++P+S + +A +K + +++LGFT A NI R + M D +I +P +
Sbjct: 278 GFRFGDTIIPVSDLDIQAYSYKSGPRGLQVLGFTKAKNIQRSFLM-DGGSYIFKP-HKDD 335
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 407
VA SA+ +AM + ++ I+R V+ +G + P + +K N F LP+AE+
Sbjct: 336 IVAFSAIFKAMIKREELMIIRKVYLNDCMP-TIGAMFPQIEDKENY---FVCVNLPYAEE 391
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 467
F+ PS F +PN +++ A NL+ +DL + PE T +P L+ Y
Sbjct: 392 EHLFKLPSLESF----KPNYEEKNAVCNLIDAMDLDDEDDELFI-PETTHDPELQYVYDC 446
Query: 468 LELKSEHQDA-APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
+ K+ + D + + ++ + +P ++ +++ ID F S ++
Sbjct: 447 VAQKAINPDKLLTKTIPEYIQSLLDPPKEMMEKAKQPIDEIIKLF----------SLQQE 496
Query: 527 LREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 586
+ EK S ++ N D + NS + V+T +PI+DF ++ + +
Sbjct: 497 ISEK-SPIEDNNASKFDCDEEVENSKQC--VITA-----FSPIEDFNKLLE-----NGFN 543
Query: 587 KAI--EDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
AI MKN L+E+S + K L ALR+
Sbjct: 544 SAIVCGKMKNITLDLIESSTSMKDLEKPASNLKALRE 580
>gi|332815405|ref|XP_001151873.2| PREDICTED: X-ray repair cross-complementing protein 5 isoform 7
[Pan troglodytes]
Length = 827
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 149/672 (22%), Positives = 293/672 (43%), Gaps = 81/672 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ F L+ + L + + +E D L I+S S + L V
Sbjct: 278 FRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 331
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 332 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 382
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 383 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 442
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 443 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 501
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 502 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 557
Query: 442 LAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
LA + ++ PNP +R + L ++ H PP+ + + P +
Sbjct: 558 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEV 617
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESK 555
+SQ + F + E K + T + + + + D P ++ + S+ S
Sbjct: 618 TTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSL 676
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKA 612
+V +G + P ++F ++ ++ + E+ N++ +E ++NE + K+
Sbjct: 677 AEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKS 730
Query: 613 VELLVALRKGCI 624
++ + A R+ I
Sbjct: 731 IDCIRAFREEAI 742
>gi|318054306|gb|ADV35595.1| X-ray repair complementing defective repair 5, partial [Brachionus
ibericus]
Length = 674
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 149/621 (23%), Positives = 282/621 (45%), Gaps = 73/621 (11%)
Query: 6 EALLLLLDVSPSMHS-------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+ L+L+LDV +M + L + ++Q+K+ E+G+ +FG ++T+NE
Sbjct: 4 KGLVLVLDVGETMSTKINRTTTYLQSCVDIIQMIVQRKMFQSSKDEIGLTVFGCDQTDNE 63
Query: 59 L-TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKKYG-E 115
L + HV +++ + +VD ++ +++ + GD LD I+V ++ +
Sbjct: 64 LWDGSSDDFRHVSLVRCLSIVDWEMLDYVQNKIVVSNIRGDVLDGILVALNHFADDQNKK 123
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI------------- 162
T+K K+ + L + C + D KE I + + +R+ I
Sbjct: 124 TFKEKRVIVLTDFSSCS--NDDFKLKE-----IGKNLARQSIRLDVISPFSEDDVNKEEK 176
Query: 163 --VVRASLSGEPH----MRV-IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI-S 214
S S + H M + +E NLLN +++ D T SL + R I S
Sbjct: 177 PNSETKSNSDDHHSSKQMTIGQVETLNLLNNLCEQAEGCLFSFDETLSLLSTYQARTIKS 236
Query: 215 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSV 274
T ++ + + EK + + K E K P + ++ K + D+ E+K D +
Sbjct: 237 SGTKYQ--MTIGEKFALPIVSLIKCKESK-PEIFRFK-KVFAKDENV--ELKTDRARFTK 290
Query: 275 EDPSKVVPPE-QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+D + + + + ++YG VPI S + ++K + EK +LGFT + N+ +HY+
Sbjct: 291 DDEQRDLNDKTDTVDAFKYGSTYVPIDS-DTVSLKLEVEKCFNILGFTKSENVHKHYFSG 349
Query: 334 D-VNLFIAEPGN-SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
D VN + +P + ++ A + RAM E + IVR V+ + S +G L P V+++
Sbjct: 350 DSVNQIMPDPSSGAQVEEAFVNMVRAMFEEDVFGIVRKVF-NSRSSPEMGCLIPYVTKET 408
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA---PSGKG 448
FY + LPF +D+++ +FS ++PN++Q D+L+ LDL+ +
Sbjct: 409 TCL--FYLS-LPFDDDLKKITLENFSIMK-KFKPNDKQLSLVDDLIDSLDLSRKIDQDEE 464
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC 508
E+ P T NP ++R + + L++ + P D+ + T LA+ S I
Sbjct: 465 ELYDPHTTFNPYIQRMFQSIALRATNPSDELPNFDEHITN------THLAKIGSRIRNNT 518
Query: 509 GQFVIK----ENP------KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK-PV 557
Q ++K E P K +K R+++ + + E S++D + +ES
Sbjct: 519 TQNILKRIQDEFPLRELVKKGEKKRRKYIEKTKIENKEEVELISMNDENLTDILESGLES 578
Query: 558 VTVDKIGDLTPIQDFEAMMSR 578
V K+G + P+ DF+ + +
Sbjct: 579 NKVKKVGTVNPVGDFKILAEK 599
>gi|328776977|ref|XP_625128.3| PREDICTED: x-ray repair cross-complementing protein 5-like [Apis
mellifera]
Length = 712
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 145/614 (23%), Positives = 274/614 (44%), Gaps = 76/614 (12%)
Query: 4 TREALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ E+L+LLL++ +P++ S+ + + R I+K + E+ ++L G+ T+N
Sbjct: 3 SAESLVLLLNIGVTNPNIENNSSLFEKAKYIAQRKIEKMIFLKPKDEIAIMLMGSSITKN 62
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETY 117
L + +++ D +V + V+ +L ++++A+ V+ + K
Sbjct: 63 NLNSK-----YIEEFTDFQVPNWDFVRKCMNLKSTKYCYNWVEALYAAVEFI--KQNVID 115
Query: 118 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVI 177
+ + L++D + + +S +++A + + SL+ +
Sbjct: 116 NSIRKIILMSD---------FNEETNIISKFEAKLIAKAENLLHDKPLTSLNSSKKL--- 163
Query: 178 IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYK 237
L ++ + + +F D+ + L+ +T + P+ + DL+L +K KI V Y
Sbjct: 164 -----LKDVHDQINGQHIIFDDAISCLKFYEQTS-VKPLPSYY-DLQLFDK-KIPVVSYV 215
Query: 238 KTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVV 297
K EKFPT KK A K + K++Y ++ ++ IKGY+YG +
Sbjct: 216 KIDIEKFPTWKK----AKGNQKLQS---KIEY----LDGQRNSYAKDEIIKGYKYGGTFI 264
Query: 298 PISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALA 355
P+ + + +K E KS K+ GFTD +NI L H+Y ++ + S T +L
Sbjct: 265 PVEKELEDKLSYKSEMKSYKIYGFTDKNNIDLEHFYKSATHVILPSSEESNVTKPFYSLV 324
Query: 356 RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQ 412
+AM E N VAIVR V+R +V + I+IP+ + V L FAED R +
Sbjct: 325 QAMHETNSVAIVRKVFRNNSTPRMVALFPC-----IDIPNEPWCLVEIELAFAEDQRLME 379
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKML---DLAPSGK---GEILQPELTPNPALERFYH 466
S + Q + +Q +A DNL+ L D+ S + + P PNPA++ +H
Sbjct: 380 --SRPMKSIIKQLSNEQNKAVDNLINSLMLNDIQDSCEIDGNQYFLPGCVPNPAIQHRWH 437
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
L ++ + D P +++ LKKI E P + S+S + F + EN LK +
Sbjct: 438 ILSYRAINPDKPLPAMENYLKKILEA-PLIKERSKSHVQNIAQLFRL-ENIDLKAKEKND 495
Query: 527 LRE---KPSGSDEPNGDGSVSDAQAV--NSMESKPVVTVDK----IGDLTPIQDF---EA 574
+ E + SD + D + NS + ++++D + +L P ++
Sbjct: 496 INEDNMQIDNSDSTKDCNKIEDKTDIENNSYKEDSILSLDTSDVDLDELAPAGSANPPQS 555
Query: 575 MMSRRDCPDWVDKA 588
++R C W+++
Sbjct: 556 QSTKRRCLAWINRC 569
>gi|380485672|emb|CCF39209.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Colletotrichum higginsianum]
Length = 730
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 154/643 (23%), Positives = 262/643 (40%), Gaps = 85/643 (13%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K VG I T+ET N + + GYE++ VL+++ + + SL+ L P T
Sbjct: 49 KTWTVGFIGLKTDETRNAMMDD-EGYENISVLRELGPM---TLTSLRELRAEVKPSETET 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + A+V+ VDM I+K+ T K K+ + L+TD L P+ D+ + +++ ++
Sbjct: 105 GDAVSAVVLAVDM-IEKFTRTLKYKRRIYLVTDGLAPIDGDDIDSIAKKINQDGIELTVL 163
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS-------AKTLFVDSTTSLRGAR 208
G+ + +P ++ +N+ +L K A+ + T L+ R
Sbjct: 164 GVDFDDAEYGFKEEDKPSIKK--KNEGILQELVSKCDKGQFATIAEAIDELDTPRLKPTR 221
Query: 209 --KTRDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFPTLKKYSDKAP------ 255
KT D P+T+ D K+ I V Y +T + K PT A
Sbjct: 222 PYKTYD-GPLTLGLADPPADLKIPPTPVVINVERYFRTKQAKPPTASTVVVSAEGQGAAS 280
Query: 256 ---------------STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVP 298
S FA Y + P + V + KGY YG V
Sbjct: 281 QSTQALEGEPMEGVESVSGFAAVRSARTYRVNDPDAPGGKRDVEFDSLAKGYEYGRTAVA 340
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
IS +EW K + ++ ++GF M + + ++ + ++ +A+S+L A+
Sbjct: 341 ISESEWNVTKLETVRTFSIIGFIPCEKYEPFLNMGETCMTVSRKFDEKSQLALSSLIHAL 400
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
E+ A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP +
Sbjct: 401 YELESYAVARLVVKDKKDPVLV-LLAPRIEPDM---ECLYDVPLPFAEDVRGYQFPPLDR 456
Query: 419 -FPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALE 462
VS Q P + A + V +DL G E P + T NP +
Sbjct: 457 VVTVSGQEITENHRLLPGDDLTAAMSDYVDSMDLGTFGADEDGNPSEYAAIDDTYNPMIH 516
Query: 463 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 522
R + ++ P+ L + P L+ +S S I +K+ P K
Sbjct: 517 RINQAIRQRAVDPQGTIEPVPPILVRYAAPPEELVEQSSSQIKTLVSAAQVKKVPPKAKG 576
Query: 523 TRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDC 581
R+ KP SG D DA + + +P ++V+ I +F+ ++ D
Sbjct: 577 KRKHEASKPLSGLD--------VDA-LLGTQPKRPKISVENA-----IPEFKRALAVADE 622
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ + A M + + L+ +S NY +A+E L LR G +
Sbjct: 623 VETIVDAXTQMGDIVARLVADSFGDANYARALENLTVLRGGLV 665
>gi|350635711|gb|EHA24072.1| hypothetical protein ASPNIDRAFT_180705 [Aspergillus niger ATCC
1015]
Length = 724
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 150/641 (23%), Positives = 266/641 (41%), Gaps = 97/641 (15%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFL 99
+GV+ T++T NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
A+V+ + M+I + + K K+ + L+T+ P+ D +S I +++ + +
Sbjct: 109 SALVLAIQMIITQC-KKLKYKRRIVLVTNGQGPMN-------PDNLSEITKKIKEDNIEL 160
Query: 160 KNIVVRASLS-------GEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSL 204
++V L+ +P V EN+ LL ++ ++ +
Sbjct: 161 IILLVTGVLTCCRGPDFDDPEYGVKEEDKDPRKAENETLLRSLAEDCDGAYGTLEQAVAE 220
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ + F+G L+L + V + E++ + Y KAPS +F
Sbjct: 221 LETPRVKTTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRN 276
Query: 265 ---------------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPI 299
V+ + Y+ + E+ + V EQ KGY YG +VPI
Sbjct: 277 EEEMGMAAAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPI 336
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
S + + +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+
Sbjct: 337 SETDENITTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALF 396
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFS 417
E+ A+ R V ++ + V+V VL P++ PD LPFAEDVR ++FP
Sbjct: 397 ELESYAVARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLD 450
Query: 418 K-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERF 464
+ VS + PN+ A D VK ++L + E L + + +P L R
Sbjct: 451 RVITVSGKVVTQHRNLPNDDLLNAMDKYVKSMELTDMDENDDPTESLPIDDSFSPVLHRI 510
Query: 465 YHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTR 524
+ ++ H + PP L K + P L+ +S+ + +K+ P K T+
Sbjct: 511 DSAIRHRAIHPNDPIPPPASVLTKFSHPPDDLVEKSKKYLYKLVAVSDVKKVPPKTKGTK 570
Query: 525 RFLR-EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
R EKP S D A+ E + KI I +F+ +S+ + +
Sbjct: 571 RTRETEKPL---------SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIE 616
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ A++ M I + +S NY + E L +R+ I
Sbjct: 617 IIKDAVKQMSTIIEDQIRHSLGDANYHRVTEGLGVMREELI 657
>gi|15825665|pdb|1JEQ|B Chain B, Crystal Structure Of The Ku Heterodimer
gi|15825717|pdb|1JEY|B Chain B, Crystal Structure Of The Ku Heterodimer Bound To Dna
Length = 565
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 243/549 (44%), Gaps = 70/549 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LI---------KKYGETYK------GKKHLCLITDAL--CPL-----------KDPDVGT 140
+ K++ E + K L +I +L C + K+ G
Sbjct: 118 IQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGD 177
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVD 199
+ D + +F L+ + L + + +E D L I+S S + L V
Sbjct: 178 RGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV- 236
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ + P L + + I++ YK +E+ D
Sbjct: 237 ----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKT 283
Query: 260 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 318
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 284 LKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVL 343
Query: 319 GFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF +S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + +
Sbjct: 344 GFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RAN 402
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
VGV P++ + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 403 PQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALI 458
Query: 438 KMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ LA + ++ PNP +R + L ++ H PP+ + + P
Sbjct: 459 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNP 518
Query: 493 DPTLLAESQ 501
+ +SQ
Sbjct: 519 PAEVTTKSQ 527
>gi|429861179|gb|ELA35879.1| ku family dna [Colletotrichum gloeosporioides Nara gc5]
Length = 727
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 162/643 (25%), Positives = 276/643 (42%), Gaps = 88/643 (13%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K VGV+ T++T N + + GYE + VLQ++ + ++ LK P GT GD
Sbjct: 49 KTWTVGVVGLKTDDTRNAMQDD-EGYESISVLQELGPMTLTSMRELKEEIKPSGTETGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+V+ VDM I+ + + K K+ + LITD L P+ DV ++++ +++ G+
Sbjct: 108 VSAVVIAVDM-IQTFTKKLKYKRRVYLITDGLGPIDADDVDDIAKKINSDGIELIVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKK-------SSAKTLFVDSTTSLRGAR--K 209
+ +P ++ +N+ +L + K + A+ + T L+ R K
Sbjct: 167 FDDAEYGFKEEDKPSIKK--QNEEVLKDLASKCDNGQFATIAEAIDELDTPRLKAVRPYK 224
Query: 210 TRDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFP---TLKKYSDKAP------ 255
T D P+T+ D K+ I V Y KT K P T+ +D +
Sbjct: 225 TYD-GPLTLGHADPPPELKIPPTPVIINVERYFKTKLAKAPGSSTVVVSADPSSQSTHTM 283
Query: 256 ---------STDKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISS 301
ST FA VK YK V DP + V E KGY YG V IS
Sbjct: 284 DAEPMEGVESTAGFAA--VKSARTYK-VNDPDAPGGKRDVEFEALAKGYEYGRTAVAISE 340
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+EW K + K+ ++GF + M + + + + ++ +A+S+L A+ E+
Sbjct: 341 SEWNVTKLETIKTFTIIGFIPSEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYEL 400
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 420
A+ R V ++ + ++V +L P + + + Y LPFAEDVR +QFP +
Sbjct: 401 ESYAVARLVIKEKKDPLLV-LLAPRIEPDM---ECLYDIPLPFAEDVRGYQFPPLDQVIT 456
Query: 421 VSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFY 465
VS Q P+++ +A + V +DL G + P + T NP + R
Sbjct: 457 VSGQKITTNHRLLPSDELTDAMSDYVDSMDLGTFGNDDEGNPSEYAAIDDTYNPIIHRLN 516
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
+ ++ + P+ L + P L+ +S S+I+A +K+ P K R
Sbjct: 517 QAIRQRAVDPEGKIDPVPPVLVRYAAPPEDLVQKSASSIEALITAADVKKVPPKAKGKRN 576
Query: 526 FLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDC 581
KP SG D V+++ + T K ++P I +F+ + +
Sbjct: 577 RETIKPLSGLD-------------VDAL----LGTAPKRAKISPENAIPEFKQALDTAED 619
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ A M + + L+ +S NY +A E L LR+G I
Sbjct: 620 IAQIKHAAAQMGSIVRSLVTDSFGDANYARAAENLGVLREGLI 662
>gi|398399317|ref|XP_003853086.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
gi|339472968|gb|EGP88062.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
Length = 726
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 147/629 (23%), Positives = 271/629 (43%), Gaps = 72/629 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAI 102
GVI T+ET+N L E Y H+K+L I + V+ L++ + T GD A+
Sbjct: 53 AGVIGLRTDETDNPLGDE-DEYHHIKILHPISQIVMSDVRKLRNDLKLSKTGEGDATSAL 111
Query: 103 VVGVDMLIKKYGETYKGKKHL---CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
VV + M+ ET K K+L L+TDA + D+ +++ + + ++V G+
Sbjct: 112 VVAIQMIT----ETCKQLKYLRKIVLVTDARANMITDDLSHITEKIKSDSIELVVLGVDF 167
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF---VDSTTSLRGARKTRDISPV 216
+ E + E++ +L + K LF ++ L+ R T+ + P
Sbjct: 168 DD--AEYGFKEENKDPLKKEHEAVLKTLC--ADGKGLFGTIAEAIDELQTPR-TKSVRPT 222
Query: 217 TIFRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPST------- 257
++G L L + M I + Y K P+ K+ + ST
Sbjct: 223 PSYKGFLTLGNVELHDDAMIIDIERYPKVMVAAAPSASKFVVRSGGHEATQSTLVGGENG 282
Query: 258 -----DKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A Y+ P + + E+ KGY YG V IS ++ F+
Sbjct: 283 TQDGGDGLAAIHNARTYQVDDENAPGGKRDLDREELSKGYEYGRTAVHISESDQNVTTFE 342
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
++S+ ++GF D + R+ + + +++ N +A++A+S+ A+ E AI R V
Sbjct: 343 TKQSLDIVGFVDKNQYQRYLDLSKACMIVSQKNNDKASMALSSFIHALHECESYAIARYV 402
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
++ + ++ +L PN + + Y LPFAED+R ++FP + VS +
Sbjct: 403 RKENSEPRML-LLCPNAEPEF---ECLYDVELPFAEDLRSYKFPPLDRVLTVSGKEIKAH 458
Query: 425 ---PNEQQQEAADNLVKMLDLA---PSGKG---EILQPELTPNPALERFYHHLELKSEHQ 475
P++ EA + V +DL+ P +G E + T NP L R + ++ ++
Sbjct: 459 RNLPSDDLLEAMSDYVDKMDLSKLVPQEEGDPTEYAPMDETYNPHLHRLHQVIKHRAVFP 518
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
+A PPP + L K + P +L +S+ A+D + +K+ P K +R R+ PS
Sbjct: 519 EADPPPPYEILGKYSHPPEEVLTKSKPALDHLLAKAEVKKVPP-KAKGKRGNRKPPS--- 574
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
+S+ + P +I + +F+ M+ D D + A + +K
Sbjct: 575 -----APLSNLDVAALLAQDPKRKSRRIDPKNAVAEFKQMLESTDDIDEMKNAFKQLKFI 629
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCI 624
I +++S Y +A+E + +R+ +
Sbjct: 630 ILDEIKHSVGENKYGQALENIYVMREQAV 658
>gi|242785406|ref|XP_002480587.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720734|gb|EED20153.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 719
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 156/676 (23%), Positives = 288/676 (42%), Gaps = 85/676 (12%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
Y + K K+ + L+TD + +G ++ + +++ G+ +
Sbjct: 119 NVYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E EN+ LL + + + + + + FRGDL L +
Sbjct: 177 EDKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTR 236
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK--------- 272
++I+V Y +T K P+ + D + + T E D +
Sbjct: 237 YDTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRT 296
Query: 273 -SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 297 YHVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHY 356
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P+
Sbjct: 357 DRFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPS 415
Query: 387 VSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADN 435
+ PD LPF EDVR ++FP K +S + PNE A
Sbjct: 416 IE-----PDYECLLEVQLPFYEDVRSYKFPPLDKVITISGKEVKEHRNLPNEDLVNAMSK 470
Query: 436 LVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
V ++L +GE++ E +P L R + ++ H + PP + L ++++
Sbjct: 471 YVDSMELIDKDEEGEVIDTIPMEDNYSPLLHRIEQAVRWRAIHPNEPVPPPSERLTRLSK 530
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 551
P +Q +D +K+ P K R++ D+P ++
Sbjct: 531 PPKDAQERAQKYLDRIIHAADVKKVPPKTKG-----RKRNRDVDKP-----------LSG 574
Query: 552 MESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
++ ++ +K ++P I +F+ M++ + + + A M+ I + NS N
Sbjct: 575 LDVDELLHREKRAKISPTNAIPEFKQMLASAENVESIKDAASQMQKIIEDHIRNSFGDSN 634
Query: 609 YPKAVELLVALRKGCI 624
Y + VE L LR+ +
Sbjct: 635 YDRVVEELGVLREELV 650
>gi|116192145|ref|XP_001221885.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
gi|121786374|sp|Q2H6C5.1|KU80_CHAGB RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|88181703|gb|EAQ89171.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
Length = 736
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 151/641 (23%), Positives = 270/641 (42%), Gaps = 89/641 (13%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHLPQG--TCAGD 97
K +GV+ TEET N E + GYEH+ VLQDI + ++ L+ Q T GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDSEGLEGYEHISVLQDIGPMTMTQLRELRSSIQTSHTYGGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ IVV + M I+ + + K + + L+T+ P+ D ++++ +++ G+
Sbjct: 109 AISGIVVALAM-IELFTKKLKYNRRIILVTNGESPIDDESSEDVANRLNYSNIELIVIGV 167
Query: 158 RMKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ + E +R ++E N + + + + L + +
Sbjct: 168 DFDDADYGFKEEDKSKGKARNEKTLRKLVEQCNNGVFGTMQQAVEELAIP---------R 218
Query: 210 TRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFP-----TLKKYSDKAPSTD 258
+ + P + G L L + + I V Y KT P + A ++
Sbjct: 219 IKPVRPFKAYDGALTLGDPEKYKSALSIHVERYFKTKRAPAPPASTVVVNSEPGGASQSE 278
Query: 259 KFATHEVKVDYEYKSVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWE 305
D E+ V+ DP + V E KGY+YG VVP S +++
Sbjct: 279 TLNEDTEMGDAEFSGVKHMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDFS 338
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
K + +KS +LGF S+ + + + +A+ N A + +SAL A+ E+ A
Sbjct: 339 ITKLETKKSFTILGFIPFSSYNPFLNLGETGIVVAQKHNEEAELGLSALIHALHELESYA 398
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FPV 421
+ R V + G Q +V +L PN + I D F Y LPFAED+R +QFP K V
Sbjct: 399 VARYVQKDGAQPQLV-LLKPNPA----IEDDFECLYDVPLPFAEDLRSYQFPPLDKVLTV 453
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHH 467
+ P+E ++A + V +DL+ E +P E P NP + R
Sbjct: 454 TGNIIKEHRLLPSEDLKQAMSDFVDAMDLSGFDVDEDGKPTEYAPIDETYNPTIHRMNQA 513
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ DA P + L + ++P L+ +++ I+A IK+ P K+ R
Sbjct: 514 IRARAVDPDAPIKPPAEILLRFSKPPEKLIEKAKPEIEALIDAAEIKKVP--AKAQGRGS 571
Query: 528 REKP----SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
R++P SG D ++S+ + T + + P +F+ +++
Sbjct: 572 RKEPVKPLSGLD-------------IDSLLGESKRTTISLDNAVP--EFKQILATAADDA 616
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ A + M + L+++S + Y +A E L +R+ I
Sbjct: 617 TIESAAKQMGQIVRKLIQDSFADLFYARAAENLRVMREELI 657
>gi|242785409|ref|XP_002480588.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720735|gb|EED20154.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 715
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 156/676 (23%), Positives = 288/676 (42%), Gaps = 85/676 (12%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
Y + K K+ + L+TD + +G ++ + +++ G+ +
Sbjct: 119 NVYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E EN+ LL + + + + + + FRGDL L +
Sbjct: 177 EDKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTR 236
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK--------- 272
++I+V Y +T K P+ + D + + T E D +
Sbjct: 237 YDTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRT 296
Query: 273 -SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 297 YHVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHY 356
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P+
Sbjct: 357 DRFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPS 415
Query: 387 VSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADN 435
+ PD LPF EDVR ++FP K +S + PNE A
Sbjct: 416 IE-----PDYECLLEVQLPFYEDVRSYKFPPLDKVITISGKEVKEHRNLPNEDLVNAMSK 470
Query: 436 LVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
V ++L +GE++ E +P L R + ++ H + PP + L ++++
Sbjct: 471 YVDSMELIDKDEEGEVIDTIPMEDNYSPLLHRIEQAVRWRAIHPNEPVPPPSERLTRLSK 530
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 551
P +Q +D +K+ P K R++ D+P ++
Sbjct: 531 PPKDAQERAQKYLDRIIHAADVKKVPPKTKG-----RKRNRDVDKP-----------LSG 574
Query: 552 MESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
++ ++ +K ++P I +F+ M++ + + + A M+ I + NS N
Sbjct: 575 LDVDELLHREKRAKISPTNAIPEFKQMLASAENVESIKDAASQMQKIIEDHIRNSFGDSN 634
Query: 609 YPKAVELLVALRKGCI 624
Y + VE L LR+ +
Sbjct: 635 YDRVVEELGVLREELV 650
>gi|449304532|gb|EMD00539.1| hypothetical protein BAUCODRAFT_172807 [Baudoinia compniacensis
UAMH 10762]
Length = 729
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 263/630 (41%), Gaps = 65/630 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K GV+ T+ T N L E Y ++ V QDI V V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDGTSNFLESE-SEYANITVFQDIGQVFMAQVRRLRGELVVSSTDAGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+++ + M++ + K ++ + LITDA ++ D+ +++ A Q+V G+
Sbjct: 108 MSALIIAIQMIVNTC-KKLKYERKIVLITDARGSMQADDLEAVVEKLKEDATQLVVLGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ +P + EN+ +L + + + + + P
Sbjct: 167 FDDPEYGFKEEDKPTSKA--ENEAILKQLCQDCGGTFGTLAQAVDELSVPRVKSVRPTPS 224
Query: 219 FRGDL------ELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEV---- 265
++G L E + I V Y KT + ++ SD APS AT +
Sbjct: 225 YKGSLTLGNPQEFDTALSIDVERYPKTMTAPAQSASRFVVRSDLAPSEVMQATQTLDGEA 284
Query: 266 --------------KVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
+ Y+ P + + ++ KGY YG V IS ++ +
Sbjct: 285 APNGYSEGLSAVKNALSYQVDDENAPGGKRDIDRDELAKGYEYGRTAVHISESDRNVTTY 344
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ S ++GF D S R M L IA+ GN +A +A+S+ A+ E+ A+ R
Sbjct: 345 ETVPSFDIIGFVDKSQYERWMDMTRAALTIAQRGNDKAIMALSSFIHALYELESYAVARL 404
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 424
V ++ + +V ++ P + + + Y LPF ED+R ++FP + VS +
Sbjct: 405 VKKENNEPRIV-LVAPCIEPDL---ECLYDVELPFTEDLRSYKFPPLDRIITVSGKELKV 460
Query: 425 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEH 474
PNE Q A + V +DLA G + +P E P +P L R ++ ++
Sbjct: 461 HRNLPNEDLQAAMSDYVDSMDLATFGTNDEGEPTEYMPMDETFSPMLHRIQQVIKHRAVF 520
Query: 475 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
++ PPP D L + + L+ +S+SA+ +K+ P K RRF R K +
Sbjct: 521 PESEPPPPADVLVRYSHSPAELVQQSKSALSRVVKAADVKKVPP-KARGRRFGRGKE--A 577
Query: 535 DEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCP---DWVDKAIED 591
+P D V A + + + D I +F+ ++ +D D V A +
Sbjct: 578 PKPLSDLDVGALLAKDMKRKRRRIDPD-----NAIPEFKQLIDAQDTEEALDVVHDACKQ 632
Query: 592 MKNKIFGLLENSNEGINYPKAVELLVALRK 621
K+ I +++S Y +A+E + +R+
Sbjct: 633 FKDIICDWIKHSVGNSGYGRAIEGIRVMRE 662
>gi|408398938|gb|EKJ78063.1| Ku70 [Fusarium pseudograminearum CS3096]
Length = 714
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 152/621 (24%), Positives = 263/621 (42%), Gaps = 65/621 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ + P T AGD + AI
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGSMTMSSLRDLQSVVKPSNTWAGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM+ + + K + + LITD P+ D+ +++ Q+ G+ +
Sbjct: 112 VVAVDMM-DTFTKKLKWNRKIFLITDGQGPMDGDDLSDISKKINDSNIQLTILGVDFDDP 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFR 220
+P + +N+ L + K ++ L R + + P +
Sbjct: 171 DYGFKEEDKPGTKE--DNEKALKALADDCKDGVFANIAEAIDELDTPR-IKAVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKTGEEK---FPTLKKYSDKAPSTDKFATHE------- 264
G L L + M I V Y KT + T+ S+ +T + E
Sbjct: 228 GALTLGDPETFPAAMSINVERYFKTHLARPLTASTVVVKSEDGEATQQTQDDEMEGIEFS 287
Query: 265 -VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 318
VK YK V DP + V + KGY YG V IS +E K +KS ++
Sbjct: 288 AVKQARSYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDAQKSFSII 346
Query: 319 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
GF + + + + IA ++++ +A+S+L A+ E+ AI R V + G+ +
Sbjct: 347 GFIPCAKYEPFLNIGETCVTIARKFDAKSAIALSSLVWALSELESYAIARIVTKDGKDPL 406
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 429
+V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 407 LV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDEL 462
Query: 430 QEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLD 483
+A + V +DL+ G + P E P NP + R H ++ ++ + + P
Sbjct: 463 NDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVNHAVKARAVYPEKPVPDTP 522
Query: 484 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSV 543
L + +P L+ + QS DA +K+ P K R KP S
Sbjct: 523 SILLRFAQPTQDLIEKVQSKTDALIQAADVKKVPPKVKGKRGRETIKPI---------SG 573
Query: 544 SDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
D A+ E K ++ D + +F+ ++ + ++ A + M I + S
Sbjct: 574 LDVDALLGEEKKSEISSD-----NAVPEFKRALAVTEDVSEIEDATKQMGTIISTFVTES 628
Query: 604 NEGINYPKAVELLVALRKGCI 624
G YP+A+E L +R+ I
Sbjct: 629 FGGDKYPRALECLGVMREELI 649
>gi|340520410|gb|EGR50646.1| hypothetical protein TRIREDRAFT_58213 [Trichoderma reesei QM6a]
Length = 731
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 151/626 (24%), Positives = 266/626 (42%), Gaps = 104/626 (16%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDFLDAI 102
VGV+ F T+ET + L+++ GYE++ +LQ + + +++L K P T GD + AI
Sbjct: 53 VGVVGFRTDETNHTLSED--GYENISILQPLGPMSMSSLKALQPKVKPSRTVEGDAISAI 110
Query: 103 VVGVDMLIKKYGETYKGKKHL-CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 161
V+ VDM I KY + K K+ + C D PD G KE+ ++ +Q
Sbjct: 111 VIAVDM-IDKYTKKNKWKRQISCEGVD----FDAPDYGFKEEDKPSVKKQ---------- 155
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
E ++ +++ + F+ V++ L R + + P + G
Sbjct: 156 --------NEETLKKLVDGCGDDSRFAS-------MVEAIDDLNEPR-AKSVKPYKTYEG 199
Query: 222 DLELSEK------MKIKVWVYKKTGEEKFPTLK-----------KYSDKAPSTDKFATHE 264
L L + ++I+V Y KT + P +D+ D
Sbjct: 200 LLTLGDPKNAPAVVEIRVERYFKTHLARPPAASTVVVKEEQAGPSQADEDEQMDGAELTA 259
Query: 265 VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
V+ YK V DP + V E KGY YG V IS ++ K EKS K++G
Sbjct: 260 VRQARTYK-VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESDQNVTKLATEKSFKIIG 318
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F + + + +A + ++ +A S+L A+ E++ A+ R V + + ++
Sbjct: 319 FVQKEKYEMLLNLGETCVTVASKYDEKSELAFSSLVWALSELDAYAVARLVTKDQKDPML 378
Query: 380 VGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQ 428
V +L P + PD Y LPFAED+R +QFP + VS Q P+++
Sbjct: 379 V-LLMPYME-----PDYVCLYDVPLPFAEDIRTYQFPPLDRVVTVSGQTLTNHRLLPSDE 432
Query: 429 QQEAADNLVKMLDLAPSGKGEILQP-------ELTPNPALERFYHHLELKSEHQDAAPPP 481
+A + V +D++ G E QP EL NPA+ R H ++ ++ H + P
Sbjct: 433 LNQAMSDYVDAMDISSYGIDEDGQPAEYATIDELY-NPAIHRIGHAIKQRAIHPEKPVPE 491
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 541
+ L + P L+ Q IDA +K+ P K R+ KP
Sbjct: 492 IPPVLLRFAAPPTELVETVQPHIDALIHAADVKKVPPKAKGKRQRETVKP---------- 541
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
++ ++ ++ ++ G ++P I DF+ ++ + + + A + M +
Sbjct: 542 -------ISGLDVDALLGEEQKGSISPENAIPDFKRALNSSEEVEQIADATKQMGAIVRS 594
Query: 599 LLENSNEGINYPKAVELLVALRKGCI 624
L+ +S Y +A+E + A+R+ I
Sbjct: 595 LITDSFGDSKYAQAMEGIGAMREELI 620
>gi|134076155|emb|CAK48968.1| unnamed protein product [Aspergillus niger]
Length = 725
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 148/626 (23%), Positives = 260/626 (41%), Gaps = 95/626 (15%)
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDM 108
ET NEL + Y H+ VL IK L+ ++ L P T GD + A+V+ + M
Sbjct: 73 ETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAISALVLAIQM 128
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMVAFGLRM 159
+I + + K K+ + L+T+ P+ ++ KED + I +G++
Sbjct: 129 IITQC-KKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDPEYGVKE 187
Query: 160 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 219
++ R + EN+ LL ++ ++ + + + F
Sbjct: 188 EDKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRVKTTRITASF 236
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE--------------- 264
+G L+L + V + E++ + Y KAPS +F
Sbjct: 237 KGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGMAAAAAGSQE 292
Query: 265 ------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
V+ + Y+ + E+ + V EQ KGY YG +VPIS + + +
Sbjct: 293 GSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDENITTLETFAA 352
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++
Sbjct: 353 IELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKEN 412
Query: 375 QQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------- 424
+ V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 413 KPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVSGKVVTQHRN 466
Query: 425 -PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAP 479
PN+ A D VK ++L + E L + + +P L R + ++ H +
Sbjct: 467 LPNDDLLNAMDKYVKSMELTDMDENGDPTESLPIDDSFSPVLHRIDSAIRHRAIHPNDPI 526
Query: 480 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR-EKPSGSDEPN 538
PP L K + P L+ +S+ +D +K+ P K T+R EKP
Sbjct: 527 PPPASVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKRTRETEKPL------ 580
Query: 539 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
S D A+ E + KI I +F+ +S+ + + + A++ M I
Sbjct: 581 ---SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIEIIKDAVKQMSTIIED 632
Query: 599 LLENSNEGINYPKAVELLVALRKGCI 624
+ +S +NY + E L +R+ I
Sbjct: 633 QIRHSLGDVNYHRVTEGLGVMREELI 658
>gi|440475797|gb|ELQ44459.1| hypothetical protein OOU_Y34scaffold00087g37 [Magnaporthe oryzae
Y34]
gi|440486397|gb|ELQ66269.1| hypothetical protein OOW_P131scaffold00411g3 [Magnaporthe oryzae
P131]
Length = 750
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 153/666 (22%), Positives = 273/666 (40%), Gaps = 93/666 (13%)
Query: 26 EKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLV 83
+KLC+ + K +VGV+ T+ T+N L + G GY ++ VLQ++ + +
Sbjct: 38 DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNISVLQNVAPMTLSAL 92
Query: 84 QSL--KHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTK 141
+ L K +P T GD + AIVV + M+ + + K K+ + L+TD + DVG
Sbjct: 93 KLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTDGQGAIDGDDVGDI 152
Query: 142 EDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVD 199
+++ + ++ G+ + E ++ N+ LL S K S ++
Sbjct: 153 ARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSISTECKESVYGTMIE 210
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKTGEEKFPT-----L 247
+ L R + P F G L L + + I V Y KT + + T +
Sbjct: 211 AVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKTKQARPITASNVMV 269
Query: 248 KKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGP 294
K +D S F ++K YK V DP + VP ++ +GY YG
Sbjct: 270 KSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDVPQDELARGYLYGR 328
Query: 295 QVVPISSAEWEAVKFKPEKSVKLLGFT--DASNILRHYYMKDVNLFIAEPGNSRATVAVS 352
VP+ +E+ K + +KS ++GF + R M + ++ A N + +A S
Sbjct: 329 TAVPMPESEFNITKLETKKSFTIIGFIAWEKKKYERFLNMGESSVIFASKFNEKDELAFS 388
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
AL A+ E + R V + G++ ++ +L P++ I + Y LPFAED+R +Q
Sbjct: 389 ALVNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYDVPLPFAEDIRYYQ 444
Query: 413 FPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTP-----N 458
FP K P+++ +EA + V +D++ +G + E P +
Sbjct: 445 FPPLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDEEAQEYAPIEDTYS 504
Query: 459 PALERFYHHLELKSEHQDAAPPPLD-DSLKKITEPDPTLLAESQSAIDAFC-------GQ 510
P + R + + H D P LD + L + + P + + ++ I+ G+
Sbjct: 505 PIIHRVNQAIRFRVVHPD-KPLGLDSEVLTRYSVPPRKVTSHAKDQIERLIKVAEVKKGK 563
Query: 511 FVIKEN----------------PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 554
F + PK K +R + + SG D DA NS
Sbjct: 564 FSLPYTMREIVLTGYWFHSAVPPKAKGKRQREVVKPISGLD--------VDALLNNSSNG 615
Query: 555 KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 614
KI + +F+ M++ D + ++ A + M + + S +NY +A E
Sbjct: 616 SSKAKRAKISAENSVPEFKQMLASADKVETIENATKQMGEVVTSFINTSMGDMNYDRAAE 675
Query: 615 LLVALR 620
+ +R
Sbjct: 676 NMRVMR 681
>gi|452846847|gb|EME48779.1| hypothetical protein DOTSEDRAFT_67726 [Dothistroma septosporum
NZE10]
Length = 728
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 140/631 (22%), Positives = 270/631 (42%), Gaps = 66/631 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDF 98
K GV+ T++T+N + E Y++VKVLQ + + V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDDTDNPMDVE-ESYQNVKVLQGLSQILMPDVRRLRKELVVSQTDAGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ ++VV + M+++ + K ++ + L+TDA P+ D+ + ++ +V G+
Sbjct: 108 ISSLVVAIHMIVET-CKKLKYERTIVLVTDARAPMDTDDLLQIKRKILEDGIDLVILGVD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ E ++ +N+ + K + + + +T+ PV
Sbjct: 167 FDD--TEYGFKEECKDQIKADNEEIFKQLCKDCNGTFGTLAQAVAEMQVPRTKSTRPVPS 224
Query: 219 FRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFATHE-V 265
++G L L + + I V Y KT K PT K+ + ST + E V
Sbjct: 225 YKGFLTLGNPEMFEDALTIDVERYPKTMVAKAPTASKFVLKQGVQEATQSTATLSNGEGV 284
Query: 266 KVD-------------YEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
V+ Y+ P K V E+ KGY YG V IS ++ F+
Sbjct: 285 PVEEGDGLAGIMTARTYQVNDENAPGGKKDVEREELSKGYEYGRTAVHISESDQNVTAFE 344
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
++ + ++GF R+ + N+ +++ N +A++A+S+L A+ E++ A+ R V
Sbjct: 345 SKQGLDIIGFVTKVQYQRYLDISRANVIMSQKHNDKASMALSSLIHALYELDSYAVARLV 404
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--- 424
+ + V+ +L PN+ PD Y LPFAED+R ++FP + VS +
Sbjct: 405 PKDMKDPKVI-ILAPNIE-----PDFECLYDIELPFAEDLRSYKFPPLDRVVTVSGKVLK 458
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLELKSE 473
P+++ Q+A + V ++L+ K E + T +P L R ++ ++
Sbjct: 459 VHRNLPSDELQDAMSDYVDGMELSTFSKDDEGEDAEYAHFDETFSPMLHRLNQVIKHRAV 518
Query: 474 HQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSG 533
+ +A P D L K P L+ +++ A++ +K+ P R +E P
Sbjct: 519 YPEAGIPEPYDLLVKYAHPPEDLVEKARPALEKVIKAAEVKKVPPKAAGKRYSRKEAPK- 577
Query: 534 SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 593
+S+ + P I + +F ++ D + + A + ++
Sbjct: 578 --------PLSNLDVTALLAQDPERKNKLIDPKNAVPEFRQIVENADDEEQLADACKQLR 629
Query: 594 NKIFGLLENSNEGINYPKAVELLVALRKGCI 624
N I+ +++S NY +A E + +R+G I
Sbjct: 630 NIIYDWIKHSVGDSNYGRATEAIRVMREGMI 660
>gi|449550383|gb|EMD41347.1| hypothetical protein CERSUDRAFT_146244 [Ceriporiopsis subvermispora
B]
Length = 830
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 142/589 (24%), Positives = 250/589 (42%), Gaps = 89/589 (15%)
Query: 9 LLLLDVSPSMHSV----LPD--------VE--------KLCSRLIQKKLIYG-KNHEVGV 47
+ L+DVSPSM + +PD VE + +Q+ + +G K + G+
Sbjct: 12 MFLVDVSPSMGKIREVEVPDGANGESMTVEMTNLEYALQFVKLKVQEMIYHGRKTEQCGL 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
ILFGT++T+N + ++ GGYEHV I D + + + GD +DA++VG++
Sbjct: 72 ILFGTDDTDNTVNEKNGGYEHVSEYIPILQPDVRTLAKISGIEPSETTGDAIDALIVGIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 167
+ + + LITD P++ D +++ + + G+ + +
Sbjct: 132 TQQEYLERKPSWTRKIVLITDGESPIEIEDWEATVSKMNALKISLTVVGVDFDDDELPFH 191
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTL----FVDSTTSLRGARKTRDISPVTIFR-GD 222
G+ ++ N++ + F+ K + F + ++ + V + R GD
Sbjct: 192 EQGKSDIKRT--NESFYHTFTSKLERGVVGNAEFALQELARPEIKQVKSQPSVFVLRVGD 249
Query: 223 LELSEKMKIKVWV--YKKTGEEKFPTLKKYSDKAPSTD------KFATHEVKV------- 267
+E + I+++V YK T + P++K+++ + D + E KV
Sbjct: 250 VESRAEEAIEIYVKTYKYTAKASLPSIKRFARRVKGDDEDESRMQLDDDEDKVIWTQLAR 309
Query: 268 -----------------DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D E + D + V E+ ++G++YG VP + K
Sbjct: 310 RTEYFIDRGDGEEDSEGDAEDERKGDALEKVEKEELVRGFKYGASYVPCPDDTFP--KLP 367
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM-KEMNKVAIVRC 369
K +++ GF A + R M +V + + VA+S+L +AM K K AI R
Sbjct: 368 TLKGIEICGFFKAKHFKRWQEMGEVYYVFGDTDKAMQQVALSSLVKAMAKSEEKFAIARW 427
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS------- 422
V + G + VGV+ P E D + +PFA+D+R F F S K VS
Sbjct: 428 VKKDGGEP-KVGVMWPMTIE--GQMDYLMWVQMPFADDIRNFPFGSLDKL-VSKTNNTVT 483
Query: 423 ---WQPNEQQQEAADNLVKMLDLAPSG-KGEILQPE------LTPNPALER----FYHHL 468
+ P ++Q+ A D V +DL +G K E + E L+ NPAL R H
Sbjct: 484 SHPYLPTKEQESAMDRFVDEMDLMNAGEKNEEGEREPWFDVRLSYNPALHRMKQALLHAA 543
Query: 469 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
+ ++ PPP + L K +P +L ++ AI+ F ++E P
Sbjct: 544 VVDDISKNPLPPPHPE-LTKYFDPPLRVLKRARDAIEECKDLFKVREVP 591
>gi|407924294|gb|EKG17347.1| Ku70/Ku80 arm [Macrophomina phaseolina MS6]
Length = 725
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 236/541 (43%), Gaps = 71/541 (13%)
Query: 47 VILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDA 101
V+ +++TEN L E GYE++ VLQ + + +Q L+ L P T GD + A
Sbjct: 55 VVALRSDKTENPLASE-EGYENISVLQQLSPI---YMQQLRELREKIRPSNTDEGDAISA 110
Query: 102 IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 161
+VV + +++ + + K ++ + L+++A + + ++ +++ G +
Sbjct: 111 LVVAIQLIVD-HCKKLKYRRRIILVSNARGSIDAEGLSEIIKKIKGENIELIVLGPDFDD 169
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+ E N++LL ++ + + + PV +RG
Sbjct: 170 L--DYGFKEEEKDETKATNEDLLKQLAEGCDGVFGTMAQAIEELEIPRVKLTKPVHSYRG 227
Query: 222 DLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFAT-------HE- 264
L L + M I V Y +T +++ PT Y SD AP + + HE
Sbjct: 228 LLTLGDPEKYDTAMTIDVERYPRTMQQRPPTASSYVVRSDLAPGESQAQSSVTMAEGHEG 287
Query: 265 ----------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
VK + Y VEDP + + E KGY YG VPIS +E F
Sbjct: 288 GMPDQSDLAAVKQNISY-YVEDPDAPGGKRDIDREDTAKGYPYGSTAVPISESERNVTDF 346
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
+ S+ ++GF A + R+ M ++ I + N +A++A+S+ A+ E+ A+ R
Sbjct: 347 ESFASLDIIGFVPADKLDRYMEMSKASIIIPQKANEKASMALSSFIHALYELETYAVARF 406
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKF-PVSWQ--- 424
V ++ ++ +++ +L P +IN +V LPFAED+R ++FP + VS +
Sbjct: 407 VPKENKEPLIL-LLAP----EINPEYECLIDVELPFAEDMRGYRFPPLDRIVTVSGKEIH 461
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSE 473
P+E ++ + + +DL+ + + E P E +P L R + ++
Sbjct: 462 THKNLPSEDLMKSMSDYIDSMDLSTAAQDEDGDPTEFAAIEEAYSPVLHRVQQAIRWRAV 521
Query: 474 HQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREK 530
H PP L + +P LL +++ ++DA +K P K +K TR F EK
Sbjct: 522 HPTEEIPPPPGILTRYMKPQEHLLKQAKPSLDAIIAAGDVKRVPPQQKGRKRTREF--EK 579
Query: 531 P 531
P
Sbjct: 580 P 580
>gi|119498147|ref|XP_001265831.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413995|gb|EAW23934.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 718
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 153/683 (22%), Positives = 281/683 (41%), Gaps = 97/683 (14%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGKSMGEKRNGRSMTDLEWAMQYVWDRITATVATGRKTATIGVIGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
NEL + ++H+ VL +I+ ++ L L P T GD + AI++ + M++ Y
Sbjct: 64 SNELDDD-PHFKHISVLSEIQQFLMPDIRRLDALIKPSKTDKGDAISAIILAIQMIVT-Y 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K K+ + L+T+ + + D+ ++ +V G + G+
Sbjct: 122 CKKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTDFDDPEYGFKEEGKDP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ EN+ LL + ++ S + + + V F+G L+L
Sbjct: 182 RKA--ENEALLRGLVEDCDGAYGTLEQAISEMDIPRAKKVRTVATFKGFLQLGNPEEYDT 239
Query: 228 KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH-EVKVDYEYKSVEDPSKVVPP--- 283
++I V Y +T Y K PS F +V + E +P K P
Sbjct: 240 ALRIPVERYYRT----------YVAKPPSASSFVLRSDVGAEEEQGESSEPPKSPPEGGA 289
Query: 284 --------------------------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
E+ KGY YG V IS + + +++L
Sbjct: 290 LTSVRNLRTYEVPDENAPGGKIDVEREELAKGYEYGRTAVHISETDENITTLETYAALEL 349
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
+GF R+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V ++ +
Sbjct: 350 VGFIQTDKYDRYMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVKENKPP 409
Query: 378 VVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PN 426
V+V +L P++ PD LPFAEDVR ++FP K VS + PN
Sbjct: 410 VMV-LLAPSIE-----PDYECLIEVQLPFAEDVRTYRFPPLDKVITVSGKVVTEHRNLPN 463
Query: 427 EQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
+ +A V ++L + + E L + + +P L R + ++ H D PP
Sbjct: 464 KDLLDAMSEYVDSMELVDTDEDGNPVEGLPIDDSFSPVLHRIDSAIRYRAIHPDDPVPPP 523
Query: 483 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDG 541
+L K+++P L+ +S++ + +K+ PK+K R EKP
Sbjct: 524 SKNLTKLSQPPQDLVEKSKAYLQKLMEVADVKKVPPKVKGRKRVRESEKPL--------- 574
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
S D A+ E + +I I +F+ +++ + + + A++ M + I ++
Sbjct: 575 SGLDVDALLHQEKRA-----RISPTNAIPEFKQTLTQAETIETIKDAVKQMTSIIEDQIK 629
Query: 602 NSNEGINYPKAVELLVALRKGCI 624
NS NY + +E + +R+ +
Sbjct: 630 NSLGDANYDRVIEEMGVMREELV 652
>gi|164428817|ref|XP_956387.2| hypothetical protein NCU00077 [Neurospora crassa OR74A]
gi|157072293|gb|EAA27151.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 670
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 212/494 (42%), Gaps = 50/494 (10%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ P E P NP + + ++ + DA PP+ + L + T P LLA+++
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAK 546
Query: 502 SAIDAFCGQFVIKE 515
+ ID +K+
Sbjct: 547 TEIDGLIQAAEVKK 560
>gi|46401620|dbj|BAD16623.1| MUS52 [Neurospora crassa]
Length = 661
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 212/494 (42%), Gaps = 50/494 (10%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VLQ++ + +++LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ P E P NP + + ++ + DA PP+ + L + T P LLA+++
Sbjct: 487 DDDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAK 546
Query: 502 SAIDAFCGQFVIKE 515
+ ID +K+
Sbjct: 547 TEIDGLIQAAEVKK 560
>gi|346971582|gb|EGY15034.1| Ku80 [Verticillium dahliae VdLs.17]
Length = 726
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 157/638 (24%), Positives = 270/638 (42%), Gaps = 79/638 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ET + L E GYE++ +LQ+I + + ++ L+ + P T GD
Sbjct: 49 KTWTVGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMNSLKELQDVIVPSETHTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ VDM+ +KY + K + + LITD P+ D ED I + +
Sbjct: 108 VSAIVIAVDMM-EKYTKALKYARKIYLITDGTGPIDGDDF---EDITKKINHDGIEL-IE 162
Query: 159 MKNIVVRASLSGEPHMR-------VIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKT 210
++AS PH + EN+ LL ++ SK A+ + +
Sbjct: 163 EDKPSLKAS-QPRPHSDESGTNSFLKKENERLLKDLVSKCKDAQLATIAEAIDELDTPRL 221
Query: 211 RDISPVTIFRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSDKAPST-- 257
+ + P + G L L + M I V Y KT + P T+ ++ PS
Sbjct: 222 KPVRPYKSYDGPLTLGDVKDPKHPSPMVINVERYFKTKLTRPPPASTVVLRTEPGPSQAA 281
Query: 258 ---------DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAE 303
++ YK V DP + V + KGY YG V IS +E
Sbjct: 282 EGEGMEGVESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESE 340
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
W K + K+ +++GF A M + + ++ + ++ +A+S+L A+ E++
Sbjct: 341 WNMTKIETTKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSS 400
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVS 422
A+ R V + G++ ++ +L P + + + Y LPFAEDVR +QFP + VS
Sbjct: 401 YAVARIVLKDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVS 456
Query: 423 WQ--------PNEQQQEAADNLVKMLDLAPSGKGEI-LQP-ELTP-----NPALERFYHH 467
Q P+++ +A + V +DL K E +P E P NPA+ R
Sbjct: 457 GQTLTKHRLIPDDELNDAMSDFVDAMDLDTFVKDEDGGEPTEYAPIDESYNPAIHRINQV 516
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ P+ L + EP LL ++++ + A +K+ P K+ R
Sbjct: 517 VRDRAIKPTGDIEPIPRVLLRYAEPPEDLLTKAKADMKALIKAAEVKKVPPKAKNKRNRD 576
Query: 528 REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 586
KP SG D GS+ + S ++ + +F+ ++ ++
Sbjct: 577 AAKPLSGLDIDALLGSLPKRARLVSRDNA-------------VPEFKQALTSATDVAAIE 623
Query: 587 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+A M I GL+ +S Y +A+E L +R I
Sbjct: 624 EAASQMGEVIRGLVTDSFGDAEYNRAIEALGVMRTELI 661
>gi|392596993|gb|EIW86315.1| SPOC domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 822
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 161/727 (22%), Positives = 298/727 (40%), Gaps = 137/727 (18%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ + +G K + GVI+FG+++T N + ++ GGY+HV I + + L L
Sbjct: 56 IQDMIFHGRKTEQCGVIIFGSDDTHNVVNEKNGGYDHVTEFIPIGQPNATTLAKLDTLKP 115
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
+GD +DA++V ++ + + + + L+TD P++ D +++ +
Sbjct: 116 SETSGDPIDALIVAIETQDQYLEKKRTWTRKIVLLTDGKNPMEIEDWEATVHKMNALHIS 175
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARKT 210
+ G+ + + G+ +++ EN+ F S S+ + + R +
Sbjct: 176 LDVVGIDFDDEEIGYQEEGKKNIK--FENEAFYAKFTSSLSNGEVGTFEKALQERYRPEP 233
Query: 211 RDISPV---TIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSD----KAPSTDKF 260
+D T+ R GD+++ E M++ V K T E+ + KK++ K + D+
Sbjct: 234 KDTKSTLMGTMLRLGDVDVRPDEAMEVLVKTSKCTMLERPKSWKKFARRQAVKQDAEDET 293
Query: 261 ATHEVKVDYEYKSV----------------------------------EDPSKVVPPEQR 286
+ +VD + K+V ++ + V EQ
Sbjct: 294 QDVDGQVDEDKKTVFSQLRMRTEYYVDHSESKDDTDDEDNEEGEDVKKKNAPEKVEKEQL 353
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
I+G++YG P ++ K +K + + GF N R + M +V A+P ++
Sbjct: 354 IRGFKYGATYAPCPDGQFP--KLPTKKGIDICGFFHRQNFRRDFSMGEVQYVWADPSSAL 411
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
V +S++ +AM + + +AI R V R G +GVL P+ +K+ D + +PFA+
Sbjct: 412 QQVTLSSVVQAMADKDVLAIARWVMRDGADP-KMGVLCPSQFDKV---DCLLWVQMPFAD 467
Query: 407 DVREFQFPSFSKF------PVS---WQPNEQQQEAADNLVKMLDLAPSGKGE---ILQP- 453
DVR++ F P++ + P +Q A +N V +DL +G+ + QP
Sbjct: 468 DVRKYTFAPLEHLVSKKGDPITTHPYLPTSEQMSAMENFVDAMDLMDAGEKDEDGHRQPW 527
Query: 454 ---ELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 506
L+ NPA+ R YH + + PP + L +P + ++ A++
Sbjct: 528 FDTRLSYNPAIHRTKQALYHSAIVNDVVSNPLAPPHPE-LVMYFDPPKRAVKRAREAVEE 586
Query: 507 FCGQFVIKENPKLKKSTRRFLRE--------------------KPSGSD------EPNGD 540
F +KE P K++ +R ++ KPS S+ EP +
Sbjct: 587 CQTVFKVKEIP--KRAAKRARKDGHVRARDDDEEMLLLDLKGPKPSASESQTTSQEPYTN 644
Query: 541 GSVSDAQAVNSMESK------------------------PVVTVDK-------IGDLTPI 569
DA A + ES+ VD IG P+
Sbjct: 645 QVSEDADAGSETESEDEELLLDQPKSGAKANPPPTPARLASTDVDPGRERGRIIGTTYPL 704
Query: 570 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVY 629
QDF+ +++ D V KA+EDM I ++ + + + L ALR+ C+ E
Sbjct: 705 QDFKKNIAQGDL---VTKAVEDMAYVIKEIVLRPFASRRHKELISCLTALRETCLKEDEI 761
Query: 630 LSVSFFL 636
+ + FL
Sbjct: 762 DAWNKFL 768
>gi|303271277|ref|XP_003055000.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462974|gb|EEH60252.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 604
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 149/364 (40%), Gaps = 55/364 (15%)
Query: 89 LPQGTCAGDFLDAIVVGVDMLIK-KYGETYKGKKHLCLITD--ALCPLKDPDVGTKEDQV 145
L G A D+LDA+ V DML++ + G + +H+ +TD C + D + +
Sbjct: 17 LDAGDAAADYLDALTVASDMLVRHERGGGFA--RHVLFVTDLRTRCEIDD-------EFI 67
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEND---------------NLLNIFSKK 190
+ IA M +R+ VV G+ E D ++LN S
Sbjct: 68 AGIAAGMKGASVRLTVAVV----DGDGDAATTSEADEETKRVNRAMLQGLCDVLNEASGV 123
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 250
++A + +T+ P T FRGDLE + + +KVWVYKK E K P++K
Sbjct: 124 AAASMSGIQDAVEALQVAQTKLTKPTTTFRGDLEFTPFVSLKVWVYKKVSEAKPPSMKLR 183
Query: 251 SDKAPSTDKFATHEVKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
D S + V + +KS DP VP E I Y YGP +PI V
Sbjct: 184 VDDDESGGAHEPNVVVRERSFKSYADPDNPVSVPSEMMISAYPYGPTNIPIQDDVAALVA 243
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA----------- 357
K +K +K+ GFT + + M + + + PG ++ A A +
Sbjct: 244 SKNDKGMKIFGFTPLDTVPQWLGMDEARILVPWPGREQSVAAGMAASAGFSPREAGKAAA 303
Query: 358 --------MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
M+ A+ R VW Q V G LTP+++ + D F LP++ED+
Sbjct: 304 AMSALARAMERKGVAALTRAVWTQNSDKVNFGALTPHITAEG---DFLLFVPLPYSEDMY 360
Query: 410 EFQF 413
F
Sbjct: 361 SSDF 364
>gi|213409423|ref|XP_002175482.1| Ku80 [Schizosaccharomyces japonicus yFS275]
gi|212003529|gb|EEB09189.1| Ku80 [Schizosaccharomyces japonicus yFS275]
Length = 686
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 158/633 (24%), Positives = 256/633 (40%), Gaps = 68/633 (10%)
Query: 28 LCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK 87
L RL++ K K +G++ F T+E+ N+L E Y ++ V I+ +Q L+
Sbjct: 40 LSQRLLENK----KTDVIGIVGFKTDESRNDLV-EQEAYWNIAVFYPIQTAKFAQLQDLR 94
Query: 88 HLPQG--TCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQV 145
T GD L AIVV D LI +Y + K K L + T A + D
Sbjct: 95 PRLSASKTMQGDLLSAIVVSFD-LIGRYCKANKWTKELFIGTGARGTIDFEDS------- 146
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 205
IA Q+ + + + R L E H DN L F +K + K L +
Sbjct: 147 DGIAEQIAQHDVHITLGLTR-DLKLERHTY-----DNQLLQFLEKCNGKLLTAQNLMEEA 200
Query: 206 GARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA-PSTD 258
R + PV IFRG L L + + Y T K P + A PS D
Sbjct: 201 QRPPIRKVKPVPIFRGILSLGNPQDPDASLAFPIERYPYTRIAKPPVSTAFDASAKPSAD 260
Query: 259 -------------KFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
H ++ + V+D + V + GY YG ++PIS
Sbjct: 261 PSGADNDEVMSQPNLGMHSDVVSTIRTYVVHDPVKDETFEVDRKDLESGYSYGRTIIPIS 320
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
S + + + + +++LGF S Y+M + NL + + + + +++ AM +
Sbjct: 321 STDEDIMSLDTQAGLEVLGFAPKSCFPPFYFMSETNLIVNKKDDEQTATQLTSFVEAMIQ 380
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
++ A+ R V + +++ VL P++ N LP+AEDVR F FPS
Sbjct: 381 EDRYALARFVNKNHNGPILL-VLIPHIE---NGTHCLIDVQLPYAEDVRAFSFPSLEHV- 435
Query: 421 VSWQPNEQQQEAADNLVK--MLD---LAPSGKGEILQPELTPNPALERFYHHLELKSEHQ 475
+ + + Q A D V +LD + S K + +P+ + + R ++ + H
Sbjct: 436 TTGEEKMRVQNAVDAYVSSMLLDNPAIQQSSKAPVFEPQFSYSVMRHRIQQAIQHYAFHP 495
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF--VIKENPKLKKSTRRFLREKPSG 533
+A P L T L +Q A++ G ++ E PK++ + + S
Sbjct: 496 NAPLPEPSPYLVHYTHAPEAALRNAQDALNTLQGVLEPIVHEAPKVEPAEKESQVSVLSI 555
Query: 534 SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 593
SD S A+ E +PV+ V P+ F ++ P +D AI +M+
Sbjct: 556 SDAEIEAMLNSTAEEQLETEKEPVLHVSASD---PVYTFYELIKN---PFGLDDAITEME 609
Query: 594 NKIFGLLENSNEGINYPKAVELLVALRKGCILE 626
+ I LL EG A E L+ALR+ CI E
Sbjct: 610 SAIRLLL---TEG-KLDSAKESLIALRETCIRE 638
>gi|397491845|ref|XP_003816850.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Pan
paniscus]
Length = 720
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 140/624 (22%), Positives = 271/624 (43%), Gaps = 72/624 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAI-----VVGVDM 108
N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA+ V+ +
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 217
Query: 109 LIKKYGETYK----------GKKHLCLITDAL--CPL-----------KDPDVGTKEDQV 145
+ KK+ + + K L +I +L C + K+ G + D
Sbjct: 218 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 277
Query: 146 STIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSL 204
+ F L+ + L + + +E D L I+S S + L V
Sbjct: 278 FRLGGHGPCFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCV------ 331
Query: 205 RGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ I +I + L + + I++ YK +E+ D
Sbjct: 332 -----FKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKE 382
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 322
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 383 DIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCK 442
Query: 323 ASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
+S + R ++M + L + A + A VA+S+L A+ +++ VAIVR + + + + VG
Sbjct: 443 SSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVG 501
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
V P++ + + LPF ED+R++ F S K + P E Q A D L+ +
Sbjct: 502 VAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMS 557
Query: 442 LAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
LA + ++ PNP +R + L ++ H PP+ + + P +
Sbjct: 558 LAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEV 617
Query: 497 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESK 555
+SQ + F + E K + T + + + + D P ++ + S+ S
Sbjct: 618 TTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSL 676
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRR 579
+V +G + P ++F ++ ++
Sbjct: 677 AEGSVTSVGSVNPAENFRVLVKQK 700
>gi|346465795|gb|AEO32742.1| hypothetical protein [Amblyomma maculatum]
Length = 555
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 193/426 (45%), Gaps = 39/426 (9%)
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T + +LE+ + I + Y K E K K++ K V+ D Y ++
Sbjct: 70 TPWNANLEIGRDISIPISSYIKVVEVKTKPWKQF------VAKRTEAPVRCDTIYYRNDE 123
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+ + + YRYG +VP + A + K + +++LGFTD SNI RHYYM
Sbjct: 124 KETELERDSTVLAYRYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMG 183
Query: 334 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
D +I A G++ A A+SAL +A+K+ VAIVR + + + +G L+P + E+
Sbjct: 184 DKTSYIVARKGDNCAGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY- 241
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---S 445
+ F LP+ ED+R F F P+ P + Q D+L+ +DL +
Sbjct: 242 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDIN 294
Query: 446 GK-GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 504
G+ E+ + T NP L+RFY ++ ++ H PP+ + + ++A ++ +
Sbjct: 295 GEPEELFKSSQTSNPYLQRFYQCVQHRAMHPKDPVPPIPQHIADAIKTPKAVMALAEPIL 354
Query: 505 DAFCGQFVIKENPKLKKSTRRFL------REKPSGSDEPNGDGSVSDAQAVNSMESKPVV 558
QF ++E +K + +++ + SDEP + +D SM
Sbjct: 355 QKIASQFPLEEVAPVKVPQDNGVGPNDHGKDQVTNSDEPAPKRARTDV----SMADLVAT 410
Query: 559 TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVA 618
K+ + P++DF+ ++S ++ + ++ I L +++ + KAV L A
Sbjct: 411 ATTKVDVVNPVEDFKKLVSSKE--QSYSEVCHQLEEVILKLFKDALGRAAHGKAVRCLRA 468
Query: 619 LRKGCI 624
R+ +
Sbjct: 469 YRQSAL 474
>gi|351712841|gb|EHB15760.1| ATP-dependent DNA helicase 2 subunit 2 [Heterocephalus glaber]
Length = 748
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 249/560 (44%), Gaps = 66/560 (11%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR+ + A++L +DVS +M + P E K+ + +Q+++ E+ ++LFGT
Sbjct: 1 MARSGKAAVVLCMDVSFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFGT 60
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLI 110
+ T+N L VG Y+++ V + +K+ D L++ + Q G+ D + + L
Sbjct: 61 DSTDNALA--VGDQYQNITVHRHLKLPDFDLLEDIDSRIQLGSQQADCI------LFWLG 112
Query: 111 KKYGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQM-VAFGLRMKNIVVRAS 167
KK+ K+H+ + TD P KD D+ + ++I+ Q + F + K+
Sbjct: 113 KKFE-----KRHIEVFTDLSSPFSKDQLDIIIHNVKKNSISLQFFLPFPIGKKD---GTG 164
Query: 168 LSGEPHMRVIIENDNLLN--IFSKKSSAKTLFVDSTTSLRGARKTRDI-------SPVTI 218
G+ ++ + + L + ++ + SL G +I + I
Sbjct: 165 DRGDGNLHLSDHGPSFLQKGVTEQQKEGIQIVKKMMLSLEGVNGLDEIYSFSESLRQLCI 224
Query: 219 FRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
F+ L + + IK+ YK +EK D +++ +
Sbjct: 225 FKKIERHSMPWPCQLTIGSNLSIKIVAYKSILQEKVKKTWIVVD----ARTLKKEDIQKE 280
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
Y +D V E I+G+RYG ++P S + E +K+K E K +LGF +S +
Sbjct: 281 TVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQ 340
Query: 328 RHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
R +YM + + +F A + ATVA+S+L A+ E++ VAIVR + + + + VGV P
Sbjct: 341 RKFYMGNQVLKVFPAH-DDEAATVALSSLIHALDELDMVAIVRYAYDR-RANPQVGVAFP 398
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 445
+ + + + LPF ED+R++ F S K + P E Q A D ++ + L
Sbjct: 399 FIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAFIESMSLIKK 454
Query: 446 GKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 500
+ E +L PNP +R + L ++ H PP+ + + +P + A+S
Sbjct: 455 DEEEDTIKDLFPTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKS 514
Query: 501 QSAIDAFCGQFVIKENPKLK 520
Q + F + E K K
Sbjct: 515 QIPLSKIKTLFPLTEAIKRK 534
>gi|225560795|gb|EEH09076.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 727
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 148/643 (23%), Positives = 277/643 (43%), Gaps = 88/643 (13%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T+++ N L E Y ++ V QDI + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDSNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ + VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIDGIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N++ L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLK 248
+ F+GDL L S + I+V Y +T G+E +
Sbjct: 223 RSMPTFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSA 282
Query: 249 KYSDKAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQV 296
+ K PS ++ A T++V + K + V ++ KGY YG
Sbjct: 283 TLATKEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTA 338
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V IS ++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++
Sbjct: 339 VHISESDENITKLETEAALEFIGFIPSDNFDRYMNMSTSNIIIAQKTNNKAILALSSIIH 398
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFP 414
A+ E+ A+ R V + G+ +VV +L P++ PD LPFAED+R ++FP
Sbjct: 399 ALFELECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFP 452
Query: 415 SFSK-FPVSWQP-NEQQQEAADNL-------VKMLDLAPSGK-GEILQP---ELTPNPAL 461
K VS + E + +D+L V L+L + GE ++ E + +P L
Sbjct: 453 PLDKVVTVSGKTVTEHRNLPSDSLLSRMAEYVDSLELTEKDEDGETIESMSIENSFSPLL 512
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
R H + ++ H PP+ + L+K++ L A+S++ + +K+ P K
Sbjct: 513 HRIDHAIRWRAVHPSEPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAK 572
Query: 522 STRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDC 581
+R + D +S ++++ V KI I +F+ +
Sbjct: 573 GRKR----------DREIDKPLSGLNVEELLQTEKRV---KISPDNAIPEFKQSLVNSQD 619
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
D V A++ M + I + +S NY +AVE L +++ +
Sbjct: 620 LDAVKDAVKQMSSIIESQIRHSLGDANYDRAVEGLGTMKEELV 662
>gi|46124687|ref|XP_386897.1| hypothetical protein FG06721.1 [Gibberella zeae PH-1]
Length = 693
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 217/505 (42%), Gaps = 82/505 (16%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ P T AGD + AI
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGPMTMSSLRDLQSAVKPSNTWAGDAVSAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV +DM+ + + K + + LITD DPD G KE+ G + N
Sbjct: 112 VVAIDMM-DTFTKKLKWNRKIFLITD---DFDDPDYGFKEEDKP---------GTKEDNE 158
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
+L+ +D +F+ + A +D + R + + P + G
Sbjct: 159 KALKALA----------DDCKDGVFANIAEA----IDELDTPR----IKGVKPYKTYDGA 200
Query: 223 LELSE------KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFAT 262
L L + M I V Y KT E+ T + D+ + A
Sbjct: 201 LTLGDPETFPAAMSINVERYFKTHLARPLTASTVVVKSEDGEATQQTQDDEMEGIEFLAV 260
Query: 263 HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
+ + YK V DP + V + KGY YG V IS +E K +KS +
Sbjct: 261 KQAR---SYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDTQKSFSI 316
Query: 318 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
+GF + + + + IA ++++T+A+S+L A+ E+ AI R V + G+
Sbjct: 317 IGFIPCAKYEPFLNIGETCVTIARKFDAKSTIALSSLVWALSELESYAIARIVTKDGKDP 376
Query: 378 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQ 428
++V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 377 LLV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDE 432
Query: 429 QQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPL 482
+A + V +DL+ G + P E P NP + R H ++ ++ + + P
Sbjct: 433 LNDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVNHAVKARAVYPEKPVPDT 492
Query: 483 DDSLKKITEPDPTLLAESQSAIDAF 507
L + +P L+ + QS DA
Sbjct: 493 PSILLRFAQPTQDLIEKVQSKTDAL 517
>gi|400597468|gb|EJP65201.1| Ku family DNA helicase, putative [Beauveria bassiana ARSEF 2860]
Length = 716
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 170/692 (24%), Positives = 286/692 (41%), Gaps = 95/692 (13%)
Query: 5 REALLLLLDVSPSM---HSVLPDVEKLCS-RLIQKKL--IYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + S R + K+ I N + +G + T+ T
Sbjct: 4 KEATVFILDLGASMGKSHSGRSESDLDWSMRYVWDKITDIVSANRKTLCIGAVGLRTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
N+L E GY+++ VLQ++ + + SLK L P T GD + AIVV VDM I
Sbjct: 64 MNKLMDE-DGYDNISVLQELGPM---TMTSLKTLQTSIKPSKTFDGDAISAIVVAVDM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
+ + K + + +ITDA + D+G +++ + G+ +
Sbjct: 119 DTFTKKLKWNRKIVMITDAQSGIDPDDIGDIAHKINDSNIHLTVLGVDFDD--PEYGYKE 176
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFRGDLELSE- 227
E EN+ L + + + V++ + R + + P + G L L +
Sbjct: 177 ENKSPAKAENEKTLKALTDQCTDSVFASIVEAIDEIDTPR-VKQVKPYKSYDGTLVLGDP 235
Query: 228 -----KMKIKVWVYKKTGEEKFPT-----LKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
M I V Y KT + T LK S ST + D E+ +V+
Sbjct: 236 DKFPFAMSINVERYFKTHLARQMTASTVVLKSESGGTQSTQTLEEEPIN-DVEFSAVKQA 294
Query: 278 S--KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
KV P E KG+ YG V IS +E K + KS ++GF
Sbjct: 295 RTYKVNAPDAPGGKKDVEFESLAKGFEYGRTAVHISESEHNITKLETIKSFSIVGFIPWE 354
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
M +V + A+ + ++ +A+S+L + E+ AI R V + G+ +V +L
Sbjct: 355 KYEPFLSMGEVCVTHAKKFDEKSELAMSSLVWGLNELESYAIARLVTKDGKDPTLV-LLA 413
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADN 435
P + ++ + Y LPFAED+R ++FP K V+ Q P E+ EA
Sbjct: 414 PGLEPEL---ECLYDVPLPFAEDIRAYKFPPLDKVVTVTGQTLTTHRLLPTEELTEAMGE 470
Query: 436 LVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDD---SL 486
V +DL G E +P E P NP + R + ++ ++ H D P+DD L
Sbjct: 471 YVDAMDLDSYGMDENGEPAEFAPFDETYNPVIHRINNVVKQRAVHPDQ---PIDDIPSIL 527
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDA 546
+ P L+ Q I+ + +K+ P K R KP
Sbjct: 528 LRYANPPQDLIDRVQDRIEDLIKEADVKKVPPKAKGRRNKEAVKP--------------- 572
Query: 547 QAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
++ ++ ++ D G +TP + DF+ M+ + + A + M I L+ +S
Sbjct: 573 --LSGLDVDALLGEDSKGQITPENAVPDFKRAMATSEEISDIQSAAKQMGGIIESLVTDS 630
Query: 604 NEGINYPKAVELLVALRKGCI-LEQVYLSVSF 634
Y +AVE + +R+ I +E+ + SF
Sbjct: 631 FGDSKYARAVECIGVMREELINMEEPEMYNSF 662
>gi|325089084|gb|EGC42394.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 723
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 149/640 (23%), Positives = 281/640 (43%), Gaps = 90/640 (14%)
Query: 45 VGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLD 100
+GVI T+++ N L E Y ++ V QDI + ++ L+ L P T GD +
Sbjct: 53 LGVIGLKTDDSNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEGDAIS 112
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGL 157
++++ +DM+++ Y + K K+ + LITD + D+ + VS I + +V G+
Sbjct: 113 SLILAIDMIVR-YCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGV 168
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ E + +N++ L + ++ S +T+ + +
Sbjct: 169 DFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMP 226
Query: 218 IFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSD 252
F+GDL L S + I+V Y +T G+E + +
Sbjct: 227 TFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIAT 286
Query: 253 KAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
K PS ++ A T++V + K + V ++ KGY YG V IS
Sbjct: 287 KEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHIS 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETEAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ PD LPFAED+R ++FP K
Sbjct: 403 LECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDK 456
Query: 419 -FPVSWQP-NEQQQEAADNLV-KMLDLAPS-------GKGEILQP---ELTPNPALERFY 465
VS + E + +D+L+ +M + S GE ++ E + +P L R
Sbjct: 457 VVTVSGKTVTEHRNLPSDSLLSRMAEYVDSLEHTEKDEDGETIESMSIENSFSPLLHRID 516
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
H + ++ H PP+ + L+K++ L A+S++ + +K+ P K +R
Sbjct: 517 HAIRWRAVHPSEPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAKGRKR 576
Query: 526 FLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDF-EAMMSRRDCPDW 584
+ D +S ++++ V KI I +F ++++S +D D
Sbjct: 577 ----------DREIDKPLSGLNVEELLQTEKRV---KISPDNAIPEFKQSLVSSQDL-DA 622
Query: 585 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
V A++ M + I + +S NY +AVE L +++ +
Sbjct: 623 VKDAVKQMSSIIESQIRHSLGDANYDRAVEGLGTMKEELV 662
>gi|71650382|ref|XP_813890.1| KU80 protein [Trypanosoma cruzi strain CL Brener]
gi|70878816|gb|EAN92039.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 152/715 (21%), Positives = 298/715 (41%), Gaps = 95/715 (13%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG---DFLDAIVVGVDMLIKKYGE 115
GG ++H+ V + ++ L H+ P C DFL+ + V D ++++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPPPPPCERHEVDFLETLFV-CDHVLRERTA 120
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI------ARQMVAFGLRMKNIVVRASLS 169
++ + LITDA DV K+D + + +V G+ V A+
Sbjct: 121 NKCYQRVVYLITDA-----HTDVARKDDMNTLLESFQQHGVSLVVIGIDFTETSVDATDD 175
Query: 170 GE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRG 221
E + + +N+ +L++ ++ V +L+ + + R I+ + R
Sbjct: 176 EERDDKSLTDLSLKAQNERVLHVMCSLLGEESKVVSLEEALQEVQELRRRKITQRALLRV 235
Query: 222 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + + +
Sbjct: 236 VLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAPL 286
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 287 RKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPL 346
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ D +F+
Sbjct: 347 ADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDADPVLGLCVPSTNER---RDVLFFSP 402
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LP+AEDVR F+F + + + E A L +++ GK +L+P T NP +
Sbjct: 403 LPYAEDVRFFEFSDYKGMWGTSSDDGDDGEEARLLAAIVEDMTVGKS-VLRPRETFNPVI 461
Query: 462 ERFYHHLELK-----------SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 510
+++Y L K L + +L AI+A
Sbjct: 462 QQYYATLRAKLRLFCDGRGAVGGKGSCGAGELRGEKNGEKNTNGEVLLPLVGAIEATSAA 521
Query: 511 FVIKEN----------PKLKKSTRRFL----REK-------------PSGSDEPNGDGSV 543
F + N KL+ R F+ RE P+ S + D S
Sbjct: 522 FGVPGNQLESVLSSVREKLEACARSFVYVSNRENCVAEERQPYRFCSPAASHDV--DASD 579
Query: 544 SDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 602
+ +A +++ + +++ +I + P+ F+A++ R+ + V A++ + + +F LL
Sbjct: 580 ASTRAPSTVATPCIISGASQITTVDPVYSFKAIVQAREGVN-VRLAMDKLGDIVFKLLRC 638
Query: 603 SNEGINYPKAVELLVALRKGCILEQVYLSVSFFLLWFAF--------AFWDNSCL 649
S Y K E ++ LR+ C+ E + FLL +FW N +
Sbjct: 639 SLGDAQYAKCTECVLVLRQHCVREGEAAYFNDFLLKLMLMARELDHESFWKNGIM 693
>gi|345566887|gb|EGX49827.1| hypothetical protein AOL_s00076g711 [Arthrobotrys oligospora ATCC
24927]
Length = 698
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 143/640 (22%), Positives = 261/640 (40%), Gaps = 59/640 (9%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K + V+ F T+ ++N L + Y ++ +L + ++ L L P T GD
Sbjct: 49 KTDTIAVVGFRTDGSDNSLFQNDENYSNISILSPMSQFLMPQIRELNKLLEPSATDRGDG 108
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ A+VV +DM I+KY + K +++ +T+ + +Q++ + G+
Sbjct: 109 VSALVVALDM-IEKYCKKLKYIRNIVFLTNGTGNFDFDGINDIIEQITEQKINLTILGVD 167
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
++ + + + EN+ L + + +T+ PV
Sbjct: 168 FDDLEFGVAEKDKSLDKA--ENERALRELCDQCDGMYGTIAEAIEEIQRPRTKKTRPVHS 225
Query: 219 FRGDLELSEK-------MKIKVWVYKKTGEEKFPTLKKYSDKAPS-TDKFATHEVKV--- 267
FRG L + + + I V + +T K PT ++ PS D + K+
Sbjct: 226 FRGQLSIGNESTNPRSTLLIDVERFPRTMVAKPPTASSFA--VPSERDSVGGNLHKIRNT 283
Query: 268 -DYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
++ + P K + EQ KGY YG +VPIS + E VKF E S+K++GF S
Sbjct: 284 RTFQVGDEDAPGKAIDIEQEDMAKGYLYGRTIVPISVEDQEIVKFDTEASLKIVGFIPKS 343
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG--- 381
R + + N+ +A N A +A+S+ A+ E++ + I R V + + V++
Sbjct: 344 GFERPICLSNSNIIVASKANDEAIMALSSFIHALYELDSLVIGRLVTKDDKPPVMIAMAP 403
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEA 432
++ P+ + + LPFAED R+++F + + P ++ QEA
Sbjct: 404 IIEPSFECLVEVQ-------LPFAEDARQYKFAPLNTVRTTAGKVLDKHRLIPTQELQEA 456
Query: 433 ADNLVKMLDLAP-SGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
D+ V +DL G + L P P H ++ + AP + I E
Sbjct: 457 MDDYVDSMDLMNLEGLNDPLLPFAQPEDIFSPLLHRIQQVIRARAIAP-----NSDGIPE 511
Query: 492 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 551
P LL S + G ++ +LK++ L + + D +S
Sbjct: 512 VSPILLNYSTIHL----GLDPEEDLDRLKQAADVCLVPAKAKGKKIGRDKPLSGLDVGRL 567
Query: 552 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 611
+E + +I PI +F M++ + + ++ M + I ++ S ++Y +
Sbjct: 568 LEER--TKSKRIDKNNPIPEFRQMIASAQQREDIQLLVQQMGDIIKDIIRYSIADLHYSR 625
Query: 612 AVELLVALRKGCI-LEQVYLSVSFFLLWFAFA------FW 644
A+E L ALR+ CI LE SF +F FW
Sbjct: 626 AIECLRALREDCITLEAFEFYDSFIRELKSFTEADRKDFW 665
>gi|440636757|gb|ELR06676.1| hypothetical protein GMDG_00293 [Geomyces destructans 20631-21]
Length = 724
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 144/636 (22%), Positives = 273/636 (42%), Gaps = 84/636 (13%)
Query: 37 LIYGKNH-EVGVILFGTEETENELTKEVGGYEHVKVLQD---IKVVD-GHLVQSLKHLPQ 91
+I G+ VG++ F T+ET N L E GY ++ ++Q IKV D L +S+K P
Sbjct: 44 MITGRTTLTVGIVGFRTDETNNALEGE-EGYNNISIMQPLGPIKVPDLKKLQKSVK--PS 100
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
+ GD + AI++ +DM+ +++ + K + + L+T+ + D+ +++ +
Sbjct: 101 KSDVGDAVSAIIIAIDMM-ERFTKKLKYARKIVLVTNGTGLMDSDDLDETSSKLNEDGIE 159
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--K 209
+V G+ ++ E + N+ +L + K K++F + +++ +
Sbjct: 160 LVVLGVDFDDL--EFGFKEEDKDSLKAGNEKVLRSLADKCE-KSIFGTAAEAVQDLSIPR 216
Query: 210 TRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------- 250
+D P F+G L L + M I + Y +T K P+ Y
Sbjct: 217 VKDYRPYATFKGQLTLGDPEKYDTAMCIDIERYFRTKVAKPPSASSYVVAEMAGDNEGDV 276
Query: 251 --SDKAPSTDKFATHEVKVDYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEW 304
D + D + VK YK V++ + + V + +G+ YG V I+ ++
Sbjct: 277 KMEDISAQGDALTS--VKNARTYKIVDESAPGGKRDVDRDDLAQGFEYGRTAVAIAESDQ 334
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + S ++GF A R++ M + + +A N +A +A+S+L ++ E+
Sbjct: 335 NITKLETVASFSIVGFIPAERYERYFNMGESCVTVAARSNEKARLALSSLVHSLAELESY 394
Query: 365 AIVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 420
A+ R V + G+ +V + + P++ I++P LPFAEDVR ++FP +
Sbjct: 395 AVARIVLKDGKDPQLVLLSPSIEPDLESLIDVP-------LPFAEDVRLYRFPPLDRVIT 447
Query: 421 VSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYH 466
+S Q P + A V +D++ GK + P E T +P L R
Sbjct: 448 LSGQTMTKHRNLPTDDLTRAMSAYVDAMDISTFGKDDEGNPVEYMAIEDTYSPVLHRINQ 507
Query: 467 HLELKSEHQD--AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTR 524
+ ++ D PPP + L K ++P L+ S + ++A +K+ P K R
Sbjct: 508 AIRRRAVQPDEPVQPPP--EVLMKYSKPPADLVKASATELEALIKAADVKKVPPKAKGRR 565
Query: 525 RFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 584
KP S + A+ S E + + D I +++ + +
Sbjct: 566 AKEAIKPL---------SGLNVDALLSREERSEINSD-----NAIPEYKQRLGTAEDITT 611
Query: 585 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
++ A ++M I L+E+S Y +A+ L +R
Sbjct: 612 IESASKEMDGIIRSLVEHSLGDSGYGQAIANLGVMR 647
>gi|170595344|ref|XP_001902342.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
gi|158590032|gb|EDP28811.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
Length = 565
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 221/517 (42%), Gaps = 57/517 (11%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
+I +K+ + ++LFG+E T+N +T + + +V+ +Q K+ D + P
Sbjct: 50 IITRKIFTESVDKFTLMLFGSEVTQNPITTDENIFFYVEEMQQAKI-DWLRFIDKEIKPS 108
Query: 92 GTCAGDFLDAIVVGVDML---IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+ GDFL A++ +D + ++ Y E+ +++ L+T+ L D E+ + TI
Sbjct: 109 KSTNGDFLSALIAALDYMRNHLENYPESNITVRNILLVTN----LGGFDGNMDEECIETI 164
Query: 149 ARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS----------AKTLFV 198
M A + + +P +I ++ + + K S A+ +
Sbjct: 165 INGMKALEINFNVVGPSFGKLSKPKDEIISTEESAIELEESKLSNTTQSFKMEPAERILT 224
Query: 199 DSTTSLRGARKT---------RDISPVTIFRGD---LELSEKMKIKVWVYKKT------- 239
D T G + R + RG LEL K+ + +YKK
Sbjct: 225 DILTQTDGVIYSFAEALPVLQRFVPRKVKVRGQKFYLELGIDFKLPLQMYKKIQPANFKL 284
Query: 240 GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED-----PSKVVPPEQRIKGYRYGP 294
+K+ ++ K + + + KVD S + S + EQ IKGY++G
Sbjct: 285 ATQKYASITDVQLKRKTVYEKCVKDEKVDDGDGSADSNLSQGSSSKISKEQTIKGYKFGT 344
Query: 295 QVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVS 352
+VP + + + +KPE + +KL+ F S IL HY M + P R A +A+S
Sbjct: 345 TIVPYNEEDQKEYGWKPENRCLKLIQFAKRSQILEHYMMDGGACYFIPPALDRSACIAIS 404
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQ 412
AL AM + VA+ R V+ ++G+ + D F LPF ED R
Sbjct: 405 ALVNAMIAEDSVALTRYVYSAASHPRIMGLFPRRSKRGV---DMFVGIKLPFYEDFRGLD 461
Query: 413 FPSFSKFPVSWQPNEQQQEAADNLVKMLDL------APSGK-GEILQPELTPNPALERFY 465
FP + P + +P +A LV+ +DL + +G+ E L+P PNP L+
Sbjct: 462 FPQLNS-PTT-EPKSDDLKAMHALVEAMDLTKAHFNSETGQFEESLRPRDVPNPKLQNVC 519
Query: 466 HHLELKSEHQDAAPPPLDDS-LKKITEPDPTLLAESQ 501
+ ++ ++ H + P DD L + EP+ LL ++
Sbjct: 520 NAMKYRALHPNIPLPAFDDKLLGGLLEPNAFLLKRAK 556
>gi|212542999|ref|XP_002151654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066561|gb|EEA20654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 722
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 162/692 (23%), Positives = 292/692 (42%), Gaps = 117/692 (16%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+Q + + L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------ 164
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 119 NVYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPD 171
Query: 165 ---------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
E +R ++E+ D + ++ + L + +RG
Sbjct: 172 YGFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG-------- 221
Query: 215 PVTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST----- 257
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 -VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEA 280
Query: 258 --DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 281 SKDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLE 340
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 341 TMAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLV 400
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--- 424
+ G+ ++V +L P + PD LPF+EDVR ++FP + +S +
Sbjct: 401 TKDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDRVITISGKEVK 454
Query: 425 -----PNEQQQEAADNLVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQ 475
P+E A V ++L +GEI++ E +P L R + ++ H
Sbjct: 455 EHRNLPSEDLVNAMSKYVDSMELIDKDEEGEIVETIPMEDNYSPLLHRIEQAVRWRAIHP 514
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
D PP + L ++++P + +Q +D +K+ P K R++ D
Sbjct: 515 DEPVPPPSERLTRLSKPPKEVQERAQKYLDRIIRAADVKKVPPKAKG-----RKRNRDVD 569
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDM 592
+P ++ ++ ++ +K ++P I +F+ M++ + + + A M
Sbjct: 570 KP-----------LSGLDIDELLHREKRAKISPTNAIPEFKQMLATAETVETIKDATSQM 618
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ I + S NY + VE L LR+ I
Sbjct: 619 QKIIEDHIRTSFGDSNYDRVVEELGVLREELI 650
>gi|212542997|ref|XP_002151653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066560|gb|EEA20653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 717
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 162/692 (23%), Positives = 292/692 (42%), Gaps = 117/692 (16%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+ L + GYE++ V+Q + + L+ ++ L P T GD + +++V + M I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQM-I 118
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------ 164
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 119 NVYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPD 171
Query: 165 ---------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
E +R ++E+ D + ++ + L + +RG
Sbjct: 172 YGFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG-------- 221
Query: 215 PVTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST----- 257
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 -VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEA 280
Query: 258 --DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 281 SKDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLE 340
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 341 TMAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLV 400
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--- 424
+ G+ ++V +L P + PD LPF+EDVR ++FP + +S +
Sbjct: 401 TKDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDRVITISGKEVK 454
Query: 425 -----PNEQQQEAADNLVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQ 475
P+E A V ++L +GEI++ E +P L R + ++ H
Sbjct: 455 EHRNLPSEDLVNAMSKYVDSMELIDKDEEGEIVETIPMEDNYSPLLHRIEQAVRWRAIHP 514
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
D PP + L ++++P + +Q +D +K+ P K R++ D
Sbjct: 515 DEPVPPPSERLTRLSKPPKEVQERAQKYLDRIIRAADVKKVPPKAKG-----RKRNRDVD 569
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDM 592
+P ++ ++ ++ +K ++P I +F+ M++ + + + A M
Sbjct: 570 KP-----------LSGLDIDELLHREKRAKISPTNAIPEFKQMLATAETVETIKDATSQM 618
Query: 593 KNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ I + S NY + VE L LR+ I
Sbjct: 619 QKIIEDHIRTSFGDSNYDRVVEELGVLREELI 650
>gi|121795545|sp|Q2MHH1.1|KU80_ASPSO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677430|dbj|BAE78504.1| Ku80 protein [Aspergillus sojae]
Length = 725
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 154/659 (23%), Positives = 273/659 (41%), Gaps = 101/659 (15%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +V + H+ VL +IK L+ ++ L P T
Sbjct: 49 KTATMGVIGLRTDETSNELEDDVH-FSHIAVLSNIK---QFLMPDIRKLEDELKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR 150
GD + AI++ + M+I + + K ++ + L+T+ + D D+G KED + +
Sbjct: 105 GDAISAIILAIQMIIT-HCKKLKYRRKIALVTNGQGRMSDEDLGEIVKKVKEDNIELVVM 163
Query: 151 QM----VAFGLRMKNIVVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLR 205
+ +G + ++ R + E +R ++E+ D + F + + L + S+R
Sbjct: 164 GIDFDDPEYGYKEEDKDPRKA-ENETLLRTLVEDCDGVYGTFEQ--AVAELDIPRVKSVR 220
Query: 206 GARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY--------- 250
V F+G L+L ++I V Y +T K PT +
Sbjct: 221 S---------VASFKGYLQLGNPEDYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAG 271
Query: 251 ------------SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYG 293
+ K + V+ Y+ VED S K+ + + KGY YG
Sbjct: 272 QEEAESSEAAAATQKGSQSGDIGLTTVRTMRTYQ-VEDKSAPGGKIDIERDDLAKGYEYG 330
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSA 353
V IS + ++L+GF R+ +M + N+ IA+ N +A +A+S+
Sbjct: 331 RTAVHISETDENITILDTFAGLELMGFIQTDRYQRYMHMSNTNIIIAQRANDKAALALSS 390
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREF 411
A+ E+ A+ R V ++ + V+V +L P++ PD LPFAEDVR +
Sbjct: 391 FIHALFELECYAVARLVVKENKPPVIV-LLAPSIE-----PDYECLLEVQLPFAEDVRTY 444
Query: 412 QFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPN 458
+FP K VS + PN+ + V ++L + + E + + +
Sbjct: 445 RFPPLDKVITVSGKVVTQHRNLPNDDLLDVMGKYVNSMELVDADEDGDPVETFPIDDSYS 504
Query: 459 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NP 517
P L R + ++ H D PP + L K + P L+ SQ ++ +K+ P
Sbjct: 505 PVLHRIDAAIRARAIHPDQPIPPPSERLTKFSHPREDLIERSQKYLEKLIEIADVKKVPP 564
Query: 518 KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMS 577
K K R EKP S D A+ E + KI I +F+ ++
Sbjct: 565 KAKGRKRTRETEKPL---------SGLDVDALLHHEKRA-----KISPNNAIPEFKQTLA 610
Query: 578 RRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+ + + + A + M + +++S NY + +E L +R + + S + FL
Sbjct: 611 QAENIEAIKDATKQMMVIVEDQIKHSLGNANYDRVIEALGTMRDELVSYEEPASYNDFL 669
>gi|358337029|dbj|GAA55452.1| ATP-dependent DNA helicase 2 subunit 2, partial [Clonorchis
sinensis]
Length = 1241
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 163/687 (23%), Positives = 298/687 (43%), Gaps = 121/687 (17%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLP-QGTC 94
K G+ E V+L GTE T+N L E G + H+ +++ + +D L++ T
Sbjct: 6 KFFQGEKEEFAVVLCGTEATDNGLADEDGNFVHISLVRALAPLDWDLLEFFNSESLLSTN 65
Query: 95 AGDFLDAIVVGVDMLIKKYGETYKG--KKHLCLITDALCPLKDPDVG--TKEDQVSTIAR 150
D +DA++VGV+ L+ + + KG +K + LI++ L P + +++ +
Sbjct: 66 DADVVDALIVGVNHLVTQCKDR-KGLSEKRILLISNLLGPADISQLTEVAHNLRIADVKL 124
Query: 151 QMVAFGLRMKNI---VVRASLS-------------GEPHMRVIIENDNLLNIFSKKSSAK 194
++ F L + RA LS G+P +V + +++S+ +
Sbjct: 125 SLIGFSLPEGSAPPESERAVLSPNSHPGPSSSRTNGDPQFKVHPAQKAIGDLWSQLNGES 184
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 254
F ++ +L +TR ++ ++ D ++ + + + V + + E + P L +
Sbjct: 185 YTFDEAIPAL-AYFETRAVAQRG-WKVDFQIGDSLSLPVEGFTQVREARPPALTQLYAAC 242
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
PST ++ Y + ++ + + Q I+G+RYG +VP ++ + AV+ EK
Sbjct: 243 PST------PIRAITTYCTQDENATELQSTQVIRGHRYGNTMVPFTAEDKAAVQPAGEKC 296
Query: 315 VKLLGFTDASNILRHYYMKD-VNLFIAE-PG-NSRATVAVSALARAMKEMNKVAIVRCVW 371
+ L+GFT ASN+ + ++ D V +F+A P N ++ALA+A+ E+N VA+VR V+
Sbjct: 297 LTLIGFTPASNVPINLHLGDSVLVFVANCPAENHPVAQGLAALAQALFELNGVALVRRVY 356
Query: 372 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF------SKF---PVS 422
+ + +GVL P V + ++ L FA+DVR FQFPS SK P
Sbjct: 357 NR-VSAPRLGVLIPEVR---GTQVALFYTDLAFADDVRTFQFPSLPLRTTPSKSHVKPDR 412
Query: 423 WQPNEQQQEAADNLVKML-------------------DLAPSGKGEILQPELTPNPALER 463
P ++Q +A D V L D A G ++PE P+P ++R
Sbjct: 413 HTPTDEQLKAMDEFVSSLILGKMSDEDDSDAECNERQDEANFGLALDVKPEQLPSPWIQR 472
Query: 464 FYHHLELKSEH--QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFV-IKENPKLK 520
+ + + + P + S+ D L+A++ ++ + + EN
Sbjct: 473 LFTCFRERGLNPTESLIPSTSNQSM------DSWLVAQNLPGLEQLLARIAPVYENASGN 526
Query: 521 ---KSTRRFL-------------REKPSGSDEP--------------NGDGS--VSDAQA 548
S RR L +E SG+ D S V + QA
Sbjct: 527 DPVSSARRHLLDCLPTLSSVEKEQEGESGASAAKRRRLMAAELFGLQTNDSSLTVDNTQA 586
Query: 549 VNSMES----------KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 598
NS V + +G + P+ DF+ ++++ D + A + ++++I
Sbjct: 587 SNSFTGGGGLILNSALSQVSQLTDVGSVDPVGDFDKLLAQGD----IRFASQRLESRIVQ 642
Query: 599 LLENSNEG-INYPKAVELLVALRKGCI 624
L+ + G I P+AV LVA R+ I
Sbjct: 643 LVTDPYTGSILRPRAVSCLVAYRERAI 669
>gi|350290744|gb|EGZ71958.1| SPOC domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 211/494 (42%), Gaps = 50/494 (10%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKH 122
GYE++ VL+++ + ++ LK P T + D + AIVV + M I+ + + K K+
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRM-IQTFTKKLKYKRK 132
Query: 123 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 182
+ ++T+ P+ D + ++ + +++ G+ + E R +N+
Sbjct: 133 IIVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEK 190
Query: 183 LLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVW 234
+L +S A + L R + + P + G L L + K I+V
Sbjct: 191 ILKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVE 249
Query: 235 VYKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS--- 278
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 250 RYFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAG 308
Query: 279 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M +
Sbjct: 309 GKKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETG 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
L +A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 369 LIVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-EC 426
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGK 447
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 427 LYDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQ 486
Query: 448 GEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
+ P E P NP + + ++ + DA PP+ + L + T P L+A+++
Sbjct: 487 DDDGHPAEYAPVDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLIAKAK 546
Query: 502 SAIDAFCGQFVIKE 515
+ ID +K+
Sbjct: 547 TEIDGLIKAAEVKK 560
>gi|330917637|ref|XP_003297893.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
gi|311329194|gb|EFQ94024.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
Length = 733
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 147/622 (23%), Positives = 258/622 (41%), Gaps = 88/622 (14%)
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKY--- 113
E GYE+++V ++K +L+ +++L P T GD L A+VV + M+
Sbjct: 71 ESEGYENIRVFSELK---QYLLSDIRNLQEQLKPSSTDDGDLLSALVVAIHMIENATKGA 127
Query: 114 -GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASLSG 170
G K + + ++TD + D+ ++ A ++V GL + V
Sbjct: 128 KGNPLKYDRRIIIVTDGRGQMVTDDLEELAAKIKDPAAPIEIVLLGLDFDDADV--GFKE 185
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E R I+N+ +L F + + + ++ PV +RG L L +
Sbjct: 186 EGKERQKIQNEEILKSFVDDCDGSFGTLATAIDQLHVPRLKETRPVHNYRGSLTLGDPQN 245
Query: 228 ---KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKAPSTDKFATH 263
+ I V Y T K PT + D P+TD A H
Sbjct: 246 YEATITIDVERYPCTMLAKPPTASSFIVRSEVKDESGQSRQSSATMTDDNPPTTDLSAIH 305
Query: 264 EVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
+V Y+ + P SK+ V E+ +GY YG V IS ++ VK + ++S +L+GF
Sbjct: 306 NSRV-YQVDDRDQPGSKITVEMEELERGYEYGRTAVHISESDMNVVKLETQQSFELVGFV 364
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
A R+ + N + + N A + +S+ A+ E + AI R V + + V++
Sbjct: 365 KAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYAIARLVAKDLKPPVLL- 423
Query: 382 VLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQE 431
+ +I + +V LPF ED+R ++FP K VS + P +
Sbjct: 424 ----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSGKTITEHKDLPTDDLLG 479
Query: 432 AADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLD-- 483
A V +DL+ G+ E +PE T +P + R H ++ ++ H + P D
Sbjct: 480 AMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRINHVIQWRATHPEPGLPIPDPP 539
Query: 484 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREKP-SGSDEPNG 539
+ L K + P LLA ++ ++ +K+ P K + +R R+KP SG D
Sbjct: 540 EILLKYSVPPAALLASTEKHLETLKKAADVKKVPPKVKGRGQRQRTERDKPLSGLD---- 595
Query: 540 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 599
V+ + KP + +L P F+ + D + + +A + M +I L
Sbjct: 596 ---------VDELLGKPKHVKIEANNLIP--SFKQALDVSDSIEAIQEAADGMAKEIRSL 644
Query: 600 LENSNEGINYPKAVELLVALRK 621
+ NS Y +A+E + +R+
Sbjct: 645 ISNSVGDSAYARALEAIRVMRE 666
>gi|240280661|gb|EER44165.1| Ku80 [Ajellomyces capsulatus H143]
Length = 723
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 147/643 (22%), Positives = 285/643 (44%), Gaps = 96/643 (14%)
Query: 45 VGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLD 100
+GVI T+++ N L E Y ++ V Q+I + ++ L+ L P T GD +
Sbjct: 53 LGVIGLKTDDSNNPLWEKDEEESYANISVFQNISQILMPQIRELRELIKPSHTLEGDAIS 112
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGL 157
++++ +DM+++ Y + K K+ + LITD + D+ + VS I + +V G+
Sbjct: 113 SLILAIDMIVR-YCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGV 168
Query: 158 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ E + +N++ L + ++ S +T+ + +
Sbjct: 169 DFDD--PEYGFKEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMP 226
Query: 218 IFRGDLEL------SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSD 252
F+GDL L S + I+V Y +T G+E + +
Sbjct: 227 TFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIAT 286
Query: 253 KAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 300
K PS ++ A T++V + K + V ++ KGY YG V IS
Sbjct: 287 KEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHIS 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETEAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 418
+ A+ R V + G+ +VV +L P++ PD LPFAED+R ++FP K
Sbjct: 403 LECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDK 456
Query: 419 -FPVSWQP-NEQQQEAADNLV-KMLDLAPS-------GKGEILQP---ELTPNPALERFY 465
VS + E + +D+L+ +M + S GE ++ E + +P L R
Sbjct: 457 VVTVSGKTVTEHRNLPSDSLLSRMAEYVDSLEHTEKDEDGETIESMSIENSFSPLLHRID 516
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
H + ++ H PP+ + L+K++ L A+S++ + +K+ P K
Sbjct: 517 HAIRWRAVHPSEPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAKG--- 573
Query: 526 FLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDF-EAMMSRRDC 581
R++ D+P ++ + + ++ +K ++P I +F ++++S +D
Sbjct: 574 --RKRDREIDKP-----------LSGLNVEELLQTEKRVKISPDNAIPEFKQSLVSSQDL 620
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
D V A++ M + I + +S NY +AVE L +++ +
Sbjct: 621 -DAVKDAVKQMSSIIESQIRHSLGDANYDRAVEGLGTMKEELV 662
>gi|238496249|ref|XP_002379360.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220694240|gb|EED50584.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 742
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 148/665 (22%), Positives = 270/665 (40%), Gaps = 96/665 (14%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T
Sbjct: 49 KTAMMGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR 150
GD + AI++ + M+I + + K ++ + L+T+ + D D+G KED + +
Sbjct: 105 GDAISAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVM 163
Query: 151 QMVAFGLRMKNIVVRA-------------SLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
++ + + K + + +PH EN+ LL +
Sbjct: 164 SVICYQIATKQKLTSSRGIDFDDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGT 220
Query: 198 VDSTTSLRGARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY- 250
+ + + + + V F+G L+L ++I V Y +T K PT +
Sbjct: 221 FEQAVAELDIPRVKSVRSVASFKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFV 280
Query: 251 --------------------SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQ 285
+ K + V+ Y+ VED S K+ + ++
Sbjct: 281 LRSEPEAGQEEAESSEAAAATQKGSQSGDAGLTAVRTMRTYQ-VEDKSAPGGKIDIERDE 339
Query: 286 RIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
KGY YG V IS + ++L+GF R+ +M + N+ IA+ N
Sbjct: 340 LAKGYEYGRTAVHISETDENITILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRAND 399
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 405
+A +A+S+ A+ E+ A+ R V ++ + V+V +L P++ + + LPFA
Sbjct: 400 KAALALSSFIHALFELECYAVARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFA 455
Query: 406 EDVREFQFPSFSKF------PVSWQPNEQQQEAAD------NLVKMLDLAPSGKG-EILQ 452
EDVR ++FP K V+ N + D N ++++D G E
Sbjct: 456 EDVRTYRFPPLDKVITVSGKVVTQHRNLPSDDLLDVMGKYVNSMELVDADEDGDPVETFP 515
Query: 453 PELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFV 512
+ + +P L R + ++ H D PP + L K + P L+ +SQ ++
Sbjct: 516 IDDSYSPVLHRIDAAIRARAIHPDQPIPPPSERLTKFSHPREDLIEKSQKHLEKLIEIAD 575
Query: 513 IKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQD 571
+K+ PK K R EKP S D A+ E + KI I +
Sbjct: 576 VKKVPPKAKGRKRTRETEKPL---------SGLDVDALLHHEKRA-----KISPNNAIPE 621
Query: 572 FEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLS 631
F+ +++ + + + A + M + +++S NY + +E L +R + + S
Sbjct: 622 FKQTLAQAENIEAIKDATKQMMVIVEDQIKHSLGDANYDRVIEALGTMRDELVSYEEPAS 681
Query: 632 VSFFL 636
+ FL
Sbjct: 682 YNDFL 686
>gi|346327581|gb|EGX97177.1| Ku family DNA helicase, putative [Cordyceps militaris CM01]
Length = 730
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 148/629 (23%), Positives = 262/629 (41%), Gaps = 63/629 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAI 102
VGV+ T+ET N L + GYE++ VLQ++ + ++SL+ P T +GD + AI
Sbjct: 53 VGVVGLRTDETRNPLMAD-DGYENISVLQELGPMTMTSLKSLQTSIKPSKTYSGDAISAI 111
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
VV VDM I + + K + + +ITDA + D+G +++ + G+ +
Sbjct: 112 VVAVDM-IDTFTKKLKWTRKIVMITDAQSAIDPDDIGDIAHKINDSNITLTVLGVDFDD- 169
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFR 220
E +N+ L + + + V++ + R + + P +
Sbjct: 170 -PEYGFKEEDKSPTKADNEKTLKSLADQCTGGVFASIVEAIDEIDTPR-VKQVKPYKTYD 227
Query: 221 GDLELSE------KMKIKVWVYKKT-------------GEEKFPTLKKYSDKAPSTDKFA 261
G L L + + I V Y KT E+ T ++ + D
Sbjct: 228 GTLVLGDPEKFPSALNINVERYFKTHVARQIAASTVVLKSEQGGTQSTHTLEEEPMDGVE 287
Query: 262 THEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
VK YK V P K V E KG+ YG V IS +E K + KS
Sbjct: 288 FSAVKQARTYK-VNAPDAPGGKKDVEFETLAKGFEYGRTAVHISESEHNITKLETTKSFS 346
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+LGF M DV + A + ++ +A+S+L + E+ A+ R V + G++
Sbjct: 347 ILGFIPWDKWEPFLGMGDVCVTHARKFDEKSELAMSSLVWGLNELESYAVARLVTKDGKE 406
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
++V +L P + ++ + Y LPFAEDVR ++FP K V+ + P +
Sbjct: 407 PILV-LLAPGLEPEL---ECLYDIPLPFAEDVRAYKFPPLDKVITVTGKTLTTHRLLPTD 462
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPP 481
+ EA V +DL G + +P E P NP + R + ++ ++ + D
Sbjct: 463 ELNEAMGEYVDAMDLDSYGMDDQGEPAEFAPIDETYNPIIHRINNAVKQRAVYPDRPIED 522
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN-PKLKKSTRRFLREK--PSGSDEPN 538
+ L + +P L+ Q I+ + +K+ P +ST +K P N
Sbjct: 523 IPSVLLRYAKPPQDLIDRVQDRIENLIKEAEVKKGMPDSTQSTGHANHQKVPPKAKGRRN 582
Query: 539 GDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNK 595
+ + ++ ++ ++ D G +TP + DF+ M+ + + A + M +
Sbjct: 583 REA----VKPLSGLDVDALLGGDSKGQITPENAVPDFKRAMATSEEISDIQSAAKQMGDI 638
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCI 624
I L+ +S Y +AVE + +R I
Sbjct: 639 IKSLITDSFGDSKYAQAVECIGVMRDELI 667
>gi|383851774|ref|XP_003701406.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Megachile rotundata]
Length = 705
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 221/504 (43%), Gaps = 62/504 (12%)
Query: 5 REALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+L++++ SP S+L + + R I+K + EV +I+ G+ T+N
Sbjct: 7 KESLMLIINIGVTSPGKSNDSSLLEKAKDIAKRKIEKMIFLRPKDEVAIIVMGSSNTKNS 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
L EH++ D +V + L++ L +L ++++A+ V+ + + +
Sbjct: 67 LNA-----EHIEEFADFQVPNWDLIRKLVNLKGTNYCSNWVEALQAAVEFMKENICDA-- 119
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
K + LI+ D +ED +S + G SL + I
Sbjct: 120 SMKRIILIS---------DFNEEEDIISQFEAVFLFRG--------EESLDERSESSLKI 162
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
L ++ K S F D+ +SLR + T F LEL +K KI V Y K
Sbjct: 163 SEQLLKDLHKKISGQHITFDDAISSLRFYTEMPKKPSPTYFT--LELVDK-KIPVVSYVK 219
Query: 239 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVP 298
K P+ ++ D + KV+ + + V+ ++ + GY+YG P
Sbjct: 220 VDTGKLPSWRRAKD-----------DQKVETKTQYVDRQRTTYTKDEIVPGYKYGGTFFP 268
Query: 299 ISSAEWEAVKFKP-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
+ + E + +K KS K+ FT+ NI L + Y + ++ + T +L +
Sbjct: 269 VEKEQEEKMSYKSGPKSYKIHCFTNRDNINLEYLYGNNTHIILPSNKVKETTKTFYSLVQ 328
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQF 413
AM + N VAIVR V+R+ +V VL P I+IPD + V L FAED R +
Sbjct: 329 AMHKTNSVAIVRKVYRENLAPKMV-VLFPC----IDIPDEPWCLVEIILTFAEDRRVMET 383
Query: 414 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHH 467
V Q + +Q EA DNL+ L L+ +G + P P+PA++ +H
Sbjct: 384 RPIKS--VVKQLSSEQNEAIDNLIDSLMLSDTGDSCELDERQYFLPGCVPDPAVQHRWHM 441
Query: 468 LELKSEHQDAAPPPLDDSLKKITE 491
L ++ + + P +++ LK+I E
Sbjct: 442 LSYRAVNPNKPLPSMENYLKEILE 465
>gi|70989095|ref|XP_749397.1| Ku family DNA helicase [Aspergillus fumigatus Af293]
gi|74669251|sp|Q4WI96.1|KU80_ASPFU RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|66847028|gb|EAL87359.1| Ku family DNA helicase, putative [Aspergillus fumigatus Af293]
gi|159128812|gb|EDP53926.1| Ku family DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 725
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 140/628 (22%), Positives = 267/628 (42%), Gaps = 68/628 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K +GVI T+ET NEL + ++H+ V +I+ ++ L L P T GD
Sbjct: 49 KTATIGVIGLKTDETSNELDDD-PHFKHISVFTEIQQFLMPDIRRLGALVKPSETDKGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AI++ + M++ Y + K K+ + L+T+ + + D+ ++ +V G
Sbjct: 108 ISAIILAIQMIV-TYCKKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTD 166
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
+ G+ + EN+ LL + + ++ S + + + V
Sbjct: 167 FDDPEYGFKEEGKDPRKA--ENEALLRGLVEDCNGAFGTLEQAVSEMDIPRAKRVRTVAT 224
Query: 219 FRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVD- 268
F+G L+L ++I V Y +T K P+ + SD ++ + ++
Sbjct: 225 FKGFLQLGNPEEYDTALRIPVERYYRTYVAKPPSASSFVLRSDVGAEGEQGESSQLPKSP 284
Query: 269 ---------YEYKSVEDPSKVVPP-------EQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
++ E P + P E+ KGY YG V IS + +
Sbjct: 285 PEGGALTSVRNLRTYEVPDENAPGGKFDVEREELAKGYEYGRTAVHISETDENITTLETY 344
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+++L+GF R+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V +
Sbjct: 345 AALELVGFIQTDKYDRYMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVK 404
Query: 373 QGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 424
+ + V+V +L P++ PD LPFAEDVR ++FP K VS +
Sbjct: 405 ENKPPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDKVITVSGKVVTEH 458
Query: 425 ---PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDA 477
PN+ +A V ++L + + E L + + +P L R + ++ H D
Sbjct: 459 RNLPNKDLLDAMSEYVDSMELVDTDETGNPVEGLPIDDSFSPVLHRIDSAIRYRAIHPDD 518
Query: 478 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDE 536
P +L K+++P L+ +S++ + +K+ PK+K R EKP
Sbjct: 519 PVLPPSKNLTKLSQPPQDLVEKSKAYLQKLMEAADVKKVPPKVKGRKRIRESEKPL---- 574
Query: 537 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 596
S D A+ E + +I I +F+ +++ + + + A++ M + I
Sbjct: 575 -----SGLDVDALLHQEKRA-----RISPTNAIPEFKQTLTQAETIETIKDAVKQMTSII 624
Query: 597 FGLLENSNEGINYPKAVELLVALRKGCI 624
++NS NY + +E + +R+ I
Sbjct: 625 EDQIKNSLGDANYDRVIEEMGVMREELI 652
>gi|403347774|gb|EJY73321.1| hypothetical protein OXYTRI_05549 [Oxytricha trifallax]
Length = 679
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 199/443 (44%), Gaps = 68/443 (15%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N RA + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNERA---FAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
E+ N + LP E+ R+++F S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDFHK--KK 347
Query: 449 EILQPELTPNPALERFY---HHLELKSEHQDAAPPP--LDDSLKKITE---PDPTLLAES 500
+ +L AL L+ Q+ +P L D K I E D L +
Sbjct: 348 TQMSQKLMNRQALFDIRPCSQVLQSNRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTHA 407
Query: 501 QSAIDAFCGQFV-----IKENPKLKKSTRRFLR--EKPSGSDEPNGDGSVSDAQAVNSME 553
Q AF F KEN K +++ ++ + G + + DG+V +
Sbjct: 408 QEEASAFEEAFKPEHNNEKENKKQEEAIIAMMKLIQNGGGFEFKDNDGAVKE-------- 459
Query: 554 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 613
IG + PI+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+
Sbjct: 460 ---------IGSVNPIEDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAI 509
Query: 614 ELLVALRKGCILEQVYLSVSFFL 636
E L +LR+ CI E + F+
Sbjct: 510 ECLASLREACITEDEAQEFNLFM 532
>gi|395326369|gb|EJF58779.1| SPOC domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 840
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 132/561 (23%), Positives = 229/561 (40%), Gaps = 78/561 (13%)
Query: 26 EKLC--SRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
E +C RL+ + K + GVILFG+EET N + GGYEHV I + +
Sbjct: 47 EMVCPTRRLVTQIFNGRKTDKCGVILFGSEETNNMINDANGGYEHVAEYIPIAQPNSATL 106
Query: 84 QSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKED 143
L L T +GD +DA++V ++ + G + + ++TD P++ ED
Sbjct: 107 AKLAALEPSTVSGDPIDALIVAIETQDQYLGNKKTWTRKVVILTDGESPIE------VED 160
Query: 144 QVSTIARQMVAFGLRMKNIVVRASLSGEP-----HMRVIIENDNLLNIFSKKSSAKTL-- 196
+T+ + M A + + + V P + +N+ F+ K A +
Sbjct: 161 WEATVNK-MNALDISLTVVGVDFDDDDLPFHEEDKSNIKQKNEAFYRTFTSKLHAGVVGN 219
Query: 197 --FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYS 251
+ S R+ + T+ R GD ++ E ++I V K T + + K++
Sbjct: 220 CDYALQEISRPDVRQVKSTLMGTVLRIGDTQVRPEEAIEISVKTSKCTALARPKSWKRFG 279
Query: 252 DKAP------------------STDKFATHEVKVDY-----------EYKSVEDPSKVVP 282
+ P T F ++ Y E K +D +V
Sbjct: 280 RRKPLAAGKDKEKHKDAMDEDEQTMTFVQLRMRTAYYLEQNKGSKAEEKKEKDDLKNLVK 339
Query: 283 --PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
E+ ++GY+YG +P++ + + K + + GF N R M +V A
Sbjct: 340 VQKEELVRGYKYGATFLPVADGGYP--RLHTRKGIDICGFFQKKNFRRELEMGEVYYVWA 397
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN----IPDS 396
+P N VA+S++ +AM E +AI R V + +GVL P+V E+++ +
Sbjct: 398 DPANPMQQVALSSIVQAMYEKGVMAIARWV-SKDDMDPKMGVLYPSVFEEVDCLLWVQVC 456
Query: 397 FYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGK 447
N +PFA+D+R F F S + P +Q +A + V +DL+ +G+
Sbjct: 457 GSLNAMPFADDIRNFPFASLETLINKKGEVVTEHPYLPTNEQMDAMEQFVDAMDLSDAGE 516
Query: 448 GE-------ILQPELTPNPALERFYHHLELKSEHQD---AAPPPLDDSLKKITEPDPTLL 497
+ L+ NPA+ R L + QD PP L K +P +L
Sbjct: 517 KDEEGNREPWFDTRLSYNPAIHRTKQALFHSAIVQDLNTHPLPPPHPELLKYMDPPRRVL 576
Query: 498 AESQSAIDAFCGQFVIKENPK 518
+++AI+ ++E PK
Sbjct: 577 KRARTAIEECKKTLKVREVPK 597
>gi|452988385|gb|EME88140.1| hypothetical protein MYCFIDRAFT_62686 [Pseudocercospora fijiensis
CIRAD86]
Length = 730
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 140/625 (22%), Positives = 257/625 (41%), Gaps = 62/625 (9%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDFLDAI 102
GVI T++T+NEL + Y ++ V + I V ++ L+ T +GD + A+
Sbjct: 53 AGVIGLRTDDTDNELADDDDSYNNISVFKPISQVTMTDIRRLRDQLTVSNTDSGDAVSAL 112
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
+ + M I + + + K+ + LITDA + D+ ++ ++V G+ +
Sbjct: 113 ALAIHM-IAETCKKLQYKRKIVLITDASSSMDTDDLSHFTKKIKEDDMELVILGVDFDD- 170
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSS------AKTLFVDSTTSLRGARKTRDISPV 216
E + N+ +L F A+ + L+ + T + +
Sbjct: 171 -AEYGFKEEDKGSLKASNEAILEQFCHDCDGAFGTLAQAIDELQIPRLKVTKGTPTRTIL 229
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAP-S 256
T+ D + + + I+V Y K P+ K+ S +AP
Sbjct: 230 TLGNPD-QYDDALTIEVERYIKVMRASPPSASKFVVREGVQHPTQSSATLSNGSAQAPEG 288
Query: 257 TDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
D A Y+ P K V ++ KGY YG V IS ++ F+ +
Sbjct: 289 GDGLAAVRTARSYQVDDENAPGGKKDVEADELSKGYEYGRTAVHISESDQNVTTFETKPG 348
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+++LGF D + R+ M + IA+ + +A++A+S+L A+ E+ AI R V R
Sbjct: 349 LEILGFVDRNQYHRYLDMSRSQMIIAKRTDEKASMALSSLIHALYELESFAIARMVPRAN 408
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------P 425
Q ++ VL+PN+ + Y LPF EDVR ++FP + VS + P
Sbjct: 409 SQPRLI-VLSPNIESDF---ECLYDTELPFNEDVRNYKFPPLDRVLTVSGKQLKIHRNLP 464
Query: 426 NEQQQEAADNLVKMLDLAPSG------KGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
E +A + V ++L + + E + T NP + + ++ ++ + D P
Sbjct: 465 EEDLLDAMSDYVDNMNLLKANTEDADEQSEYAAMDDTYNPVIHKLTQAIKHRAVYPDDEP 524
Query: 480 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 539
P + K ++P L+ +S++A+D +K+ P K +R+ R +D P
Sbjct: 525 PEPYHIITKYSQPPEHLVEQSKTALDKVIAAGSVKKVPP-KARGKRWGR-----TDAPK- 577
Query: 540 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 599
+SD + P KI I +F+ M+ D + +A + +K I
Sbjct: 578 --PLSDLDVAALLAQDPKRKAKKIDPENAIPEFKQMLQHADAIPEIYEACKQLKFIILDW 635
Query: 600 LENSNEGINYPKAVELLVALRKGCI 624
+S N + VE + +R+ I
Sbjct: 636 ARHSIGESNTGRVVEGIRVMREEVI 660
>gi|121710658|ref|XP_001272945.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401095|gb|EAW11519.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 720
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 145/633 (22%), Positives = 261/633 (41%), Gaps = 76/633 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +E + H+ VL I+ L+ ++ L P T
Sbjct: 49 KTATIGVIGLKTDETSNEL-EEDPHFRHISVLSGIQ---QFLMPDIRKLAGTIKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + AI++ + M++ Y + K K+ + L+T+ + D+ ++ ++V
Sbjct: 105 GDAISAIILAIQMIV-TYCKKLKYKRKIVLVTNGRGWMSSEDLEQITQKIKEDNIELVVL 163
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G + E EN+ LL + ++ S + + +
Sbjct: 164 GTDFDD--PEYGFKEEEKDAQKAENEALLRGLVEDCDGAYGTLEQAVSEMDIPRVKKVRT 221
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFP--------------------TLKK 249
V F+G L+L ++I V Y +T K P T+
Sbjct: 222 VATFKGYLQLGNPEEYETALRIPVERYYRTYVAKPPSASSFVLRSEIPEQDLEESGTVTG 281
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAV 307
D P + Y+ P KV V E+ KGY YG V IS+ +
Sbjct: 282 TPDTHPEGGPLTSVRNLRTYQVTDENAPGGKVDVEREELAKGYEYGRTAVHISATDENIT 341
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ +++L+GF R+ ++ N+ + + GN +A++AVS+ A+ E+ A+
Sbjct: 342 TLETFAALELVGFIQTDKYDRYMHLTTTNIIVGQRGNDKASLAVSSFIHALFELECFAVA 401
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ 424
R V ++ + V+V +L P++ PD LPFAEDVR ++FP + VS +
Sbjct: 402 RLVTKENKAPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDRVITVSGK 455
Query: 425 --------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKS 472
PN+ +A V ++LA + + E L + + +P L R + ++
Sbjct: 456 VVTEHRNLPNKDLLDAMSKYVDSMELANTDEDGEPVEGLPIDNSFSPVLHRIDSAIRYRA 515
Query: 473 EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKP 531
H + PP +L K+++P L+ +++ ++ +K+ PK K R EKP
Sbjct: 516 IHPNDPVPPPSKNLTKLSQPPQELVEKAERYLEKLMAAADVKKVPPKAKGRKRARESEKP 575
Query: 532 SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 591
S D A+ E + KI I +F+ +++ + + + +A++
Sbjct: 576 L---------SGLDVDALLHQEKRA-----KISSNNAIPEFKQTLAQAENIETITEAVKQ 621
Query: 592 MKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
M I ++NS NY + E L +R I
Sbjct: 622 MNTIIEDQVQNSLGDANYDRVNEALGVMRGELI 654
>gi|407852203|gb|EKG05832.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 154/716 (21%), Positives = 304/716 (42%), Gaps = 97/716 (13%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKYGE 115
GG ++H+ V + ++ L H+ P DFL+ + V D ++++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPTPPPCERHEVDFLETLFV-CDHVLRERTA 120
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ-------MVAFGLRMKNIVVRASL 168
++ + LITDA DV K D+++T+ +V G+ V A+
Sbjct: 121 NKCYQRVVYLITDA-----HTDVARK-DEMNTLLESFQQHGVSLVVIGIDFTETSVDATD 174
Query: 169 SGE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFR 220
E + + +N+ +L++ +++ V +L+ + + R I+ + R
Sbjct: 175 DEERDDKSLTDLSLKAQNERVLHVMCSLLGEESMVVSLEEALQEVQELRRRKITQRALLR 234
Query: 221 GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV 280
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + +
Sbjct: 235 VVLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAP 285
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+ E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 286 LRKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMP 345
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ D +F+
Sbjct: 346 LADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDTDPVLGLCVPSTNER---RDVLFFS 401
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LP+AEDVR +F + + + +E A L +++ GK +L+P T NP
Sbjct: 402 PLPYAEDVRFLEFSDYKGMWGNSNDDGDDEEEARLLAAIVEEMTVGKS-VLRPRETFNPV 460
Query: 461 LERFYHHLELK-------SEHQDAAPPPLDDSLK--KITEPDPT--LLAESQSAIDAFCG 509
++++Y L K E D L+ K E + +L AI+A
Sbjct: 461 IQQYYATLRAKLRLFCDGREGVGGKGSCGADELRGGKNGEKNTNGEVLLPLVGAIEATSA 520
Query: 510 QFVIKEN----------PKLKKSTRRFL----REK-------------PSGSDEPNGDGS 542
F + N KL+ R F+ RE P+ S + D S
Sbjct: 521 AFGVPGNQLESVLSSVREKLEACARSFVYVSNRENCVAEERQSYRFYSPAASHDV--DAS 578
Query: 543 VSDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
+ +A +++ + +++ +I + P+ F+A++ R+ + V A++ + + +F LL
Sbjct: 579 DTSTRAPSTVATPCIISDASQITTVDPVYSFKAIVQAREGVN-VRLAMDKLGDIVFKLLR 637
Query: 602 NSNEGINYPKAVELLVALRKGCILEQVYLSVSFFLLWFAF--------AFWDNSCL 649
S Y K ++ LR+ C+ E + FLL +FW N +
Sbjct: 638 CSLGDAQYAKCTGCVLVLRQHCVREGEAAYFNDFLLKLMLMARELDHESFWKNGIM 693
>gi|403351317|gb|EJY75148.1| hypothetical protein OXYTRI_03469 [Oxytricha trifallax]
Length = 873
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 199/443 (44%), Gaps = 68/443 (15%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N RA + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNERA---FAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
E+ N + LP E+ R+++F S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDFHK--KK 347
Query: 449 EILQPELTPNPALERFY---HHLELKSEHQDAAPPP--LDDSLKKITE---PDPTLLAES 500
+ +L AL L+ Q+ +P L D K I E D L +
Sbjct: 348 TQMSQKLMNRQALFDIRPCSQVLQSNRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTHA 407
Query: 501 QSAIDAFCGQFV-----IKENPKLKKSTRRFLR--EKPSGSDEPNGDGSVSDAQAVNSME 553
Q AF F KEN K +++ ++ + G + + DG+V +
Sbjct: 408 QEEASAFEEAFKPEHNNEKENKKQEEAIIAMMKLIQNGGGFEFKDNDGAVKE-------- 459
Query: 554 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 613
IG + PI+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+
Sbjct: 460 ---------IGSVNPIEDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAI 509
Query: 614 ELLVALRKGCILEQVYLSVSFFL 636
E L +LR+ CI E + F+
Sbjct: 510 ECLASLREACITEDEAQEFNLFM 532
>gi|317147298|ref|XP_003189905.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus oryzae RIB40]
Length = 722
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 147/648 (22%), Positives = 266/648 (41%), Gaps = 79/648 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T
Sbjct: 49 KTAMMGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + AI++ + M+I + + K ++ + L+T+ + D D+G +V ++V
Sbjct: 105 GDAISAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVM 163
Query: 156 GLRMKNIVV-RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
G+ + +PH EN+ LL + + + + + +
Sbjct: 164 GIDFDDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVR 220
Query: 215 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 250
V F+G L+L ++I V Y +T K PT +
Sbjct: 221 SVASFKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEA 280
Query: 251 ---SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSA 302
+ K + V+ Y+ VED S K+ + ++ KGY YG V IS
Sbjct: 281 AAATQKGSQSGDAGLTTVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISET 339
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ ++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+
Sbjct: 340 DENITILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELE 399
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF--- 419
A+ R V ++ + V+V +L P++ + + LPFAEDVR ++FP K
Sbjct: 400 CYAVARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDKVITV 455
Query: 420 ---PVSWQPNEQQQEAAD------NLVKMLDLAPSGKG-EILQPELTPNPALERFYHHLE 469
V+ N + D N ++++D G E + + +P L R +
Sbjct: 456 SGKVVTQHRNLPSDDLLDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAIR 515
Query: 470 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLR 528
++ H D PP + L K + P L+ +SQ ++ +K+ PK K R
Sbjct: 516 ARAIHPDQPIPPPSERLTKFSHPREDLIEKSQKHLEKLIEIADVKKVPPKAKGRKRTRET 575
Query: 529 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
EKP S D A+ E + KI I +F+ +++ + + + A
Sbjct: 576 EKPL---------SGLDVDALLHHEKRV-----KISPNNAIPEFKQTLAQAENIEAIKDA 621
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+ M + +++S NY + +E L +R + + S + FL
Sbjct: 622 TKQMMVIVEDQIKHSLGNANYDRVIEALGTMRDELVSYEEPASYNDFL 669
>gi|380023984|ref|XP_003695789.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU80-like, partial [Apis florea]
Length = 676
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 252/575 (43%), Gaps = 100/575 (17%)
Query: 6 EALLLLLDVSPSMHSVLPDVEKLCSRLIQ-KKLIYGK-NHEVGVILFGTEETENELTKEV 63
E+L+LLL+V + P+VE S + K +I+ K EV +IL G+ T+N
Sbjct: 9 ESLVLLLNVGITN----PNVENNSSLFEKAKHIIFLKPKDEVAIILMGSSITKNNF---- 60
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
+++++ D +V + V+ +L ++++A+ V+ +
Sbjct: 61 -NFKYIEEFTDFQVPNWDFVKKCMNLQSTKYCYNWVEALYAAVEFI-------------- 105
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 183
K++ + R+ I++ + + E ++ E + +
Sbjct: 106 -----------------KQNVIDNSIRK----------IILMSDFNEETNIISKFEANLI 138
Query: 184 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF--RGDLELSEKMKIKVWVYKKTGE 241
+N +F D+ +SL+ +T V +F DL+L +K KI + Y K
Sbjct: 139 IN------GQHIIFDDAISSLKFYEETS----VKLFPTYYDLQLFDK-KIPIVSYVKIDI 187
Query: 242 EKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
EKFPT KK A K + +D + S ++ IKGY+YG +P+
Sbjct: 188 EKFPTWKK----AKGNQKLQSKTEYLDGQRNSY-------TKDEIIKGYKYGGTFIPVEK 236
Query: 302 AEWEAVKFKP-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
+ + +K KS K+ GFTD +NI L ++Y ++ + + T +L +AM
Sbjct: 237 ELEDKMSYKSGMKSYKIYGFTDKNNIDLEYFYKSATHVILPSSETNNVTKPFYSLVQAMH 296
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQFPSF 416
E N VAIVR V+R +V + I+IPD + + L FAED R + S
Sbjct: 297 ETNSVAIVRKVFRNNSTPRMVALFPC-----IDIPDEPWCLIEIELAFAEDRRLME--SR 349
Query: 417 SKFPVSWQPNEQQQEAADNLVK--ML-DLAPSGK---GEILQPELTPNPALERFYHHLEL 470
+ Q + +Q EA DNL+ ML D+ S + + P PNPA++ +H L
Sbjct: 350 PMKSIIKQLSNEQNEAVDNLINSVMLNDIQDSYEVDGNQYFLPGCVPNPAIQHRWHILSY 409
Query: 471 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK 530
++ + D PP+++ LKKI E P + S+S I F + EN LK + ++E
Sbjct: 410 RAINPDKPLPPMENYLKKILEA-PLIKERSKSHIQKIAQLFRL-ENIDLKAEEKSDIKED 467
Query: 531 PSGSDEPNG--DGSVSDAQAV--NSMESKPVVTVD 561
D+ + D + D + NS + ++++D
Sbjct: 468 NMQIDDNSDTKDNKIEDKVDIENNSYKEDSILSLD 502
>gi|121795547|sp|Q2MHH2.1|KU80_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677428|dbj|BAE78503.1| Ku80 protein [Aspergillus oryzae]
Length = 725
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 147/648 (22%), Positives = 266/648 (41%), Gaps = 79/648 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +V + H+ VL ++K L+ ++ L P T
Sbjct: 49 KTAMMGVIGLRTDETSNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + AI++ + M+I + + K ++ + L+T+ + D D+G +V ++V
Sbjct: 105 GDAISAIILAIQMIIT-HCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVM 163
Query: 156 GLRMKNIVV-RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
G+ + +PH EN+ LL + + + + + +
Sbjct: 164 GIDFDDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVR 220
Query: 215 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 250
V F+G L+L ++I V Y +T K PT +
Sbjct: 221 SVASFKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEA 280
Query: 251 ---SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSA 302
+ K + V+ Y+ VED S K+ + ++ KGY YG V IS
Sbjct: 281 AAATQKGSQSGDAGLTTVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISET 339
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ ++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+
Sbjct: 340 DENITILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELE 399
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF--- 419
A+ R V ++ + V+V +L P++ + + LPFAEDVR ++FP K
Sbjct: 400 CYAVARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDKVITV 455
Query: 420 ---PVSWQPNEQQQEAAD------NLVKMLDLAPSGKG-EILQPELTPNPALERFYHHLE 469
V+ N + D N ++++D G E + + +P L R +
Sbjct: 456 SGKVVTQHRNLPSDDLLDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAIR 515
Query: 470 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLR 528
++ H D PP + L K + P L+ +SQ ++ +K+ PK K R
Sbjct: 516 ARAIHPDQPIPPPSERLTKFSHPREDLIEKSQKHLEKLIEIADVKKVPPKAKGRKRTRET 575
Query: 529 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
EKP S D A+ E + KI I +F+ +++ + + + A
Sbjct: 576 EKPL---------SGLDVDALLHHEKRV-----KISPNNAIPEFKQTLAQAENIEAIKDA 621
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVYLSVSFFL 636
+ M + +++S NY + +E L +R + + S + FL
Sbjct: 622 TKQMMVIVEDQIKHSLGNANYDRVIEALGTMRDELVSYEEPASYNDFL 669
>gi|357626202|gb|EHJ76373.1| ku P80 DNA helicase [Danaus plexippus]
Length = 706
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 162/657 (24%), Positives = 302/657 (45%), Gaps = 79/657 (12%)
Query: 1 MARTR--EALLLLLDVSPSMHSVLPD---------VEKLCSRLIQKKLIYGKNHEVGVIL 49
MA T+ + +++LDV ++ S+L D + R+I++K++ + +G+IL
Sbjct: 1 MAPTKVDQGTIIILDVGKNV-SILEDKNQKSFFESARECAVRIIERKILSQGKNLLGIIL 59
Query: 50 FGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM 108
G++ ++N L+++ G ++++L +++ +++ L P + G++LDA++V VD
Sbjct: 60 LGSKISKNNLSEQTPGCCRNIELLAELQYPTWKMIRDLPTQPTKS-TGNWLDALIVAVDH 118
Query: 109 LIKKYGETYK-GKKHLCLITD--ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
K + ++K K++ L+T+ AL L++ D+ T + Q F L V+
Sbjct: 119 F-KSHTSSFKIADKNIILLTNFEALSDLEESDIET-----AISGFQEDGFELD----VIG 168
Query: 166 ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS--LRGARKTRDISPVTIFRGDL 223
L E + I+ L F + ++ T D L +KT + +P + DL
Sbjct: 169 PELYNEDNKNSDID---LARQFVEGTNGSTATFDYAMRYLLFHKKKTVNSNPWNV---DL 222
Query: 224 ELSEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKF-ATHEVKVDYEYKSVEDPSKV 280
+ +KI V Y + +E P +K + S + P T+K AT ++ + + E +V
Sbjct: 223 SIGPNIKIPVSAYIRIKDE--PVVKNFNKSVRNPVTEKSSATEYIERKKTFINTEAQMEV 280
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI- 339
E IKGY+YG QV+P S + + KS+ + GFT + NI D ++
Sbjct: 281 ESTEV-IKGYQYGEQVIPFSDFDKSMIYDAGNKSLNVYGFTKSGNITWQNLNGDGLYYVF 339
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
+ G+ ++ AV L + E++ VAIVR V+ G + VL P + + +
Sbjct: 340 GQKGDKKSEYAVRCLVECLLELDLVAIVRRVYNNGNAPRMF-VLMPVIDSENFV--GLSM 396
Query: 400 NVLPFAEDVREFQFPS--FSKFPVSWQPNEQQQEAADNLVKMLDLAPS-GKGEILQPELT 456
L + E+++ FP+ K+ S EQQ EA L+K +DL + + + E
Sbjct: 397 AGLCYKEEIKSMAFPATNLKKYNCS----EQQVEAFKELIKAMDLTKAYDESDFDDTEAF 452
Query: 457 P-----NPALERFYHHLELKS--EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCG 509
P +P+ + + ++ HQ P P DD + P P + ++ ++
Sbjct: 453 PIAKVVSPSAQYILDCIAFRAMNPHQ-PLPQPRDDIMVLFKVP-PLIEKRARDPMEKLKE 510
Query: 510 QFVIK----ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIG 564
F + + PK +K+ + EKP S EP D VN ++ +P + IG
Sbjct: 511 LFELNRVEVKKPK-RKTVPMDIDEKPGTSREPEIS---DDMPKVNLNVVKRPDII---IG 563
Query: 565 DLTPIQDFEAMMSR-RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
L PI D+E + + R D + IE +++ I G ++ ++ KA++ + LR
Sbjct: 564 TLNPINDYEKLKNEGRTICDLYKQMIEAIESLIHGNIDG-----DFTKALDAMAYLR 615
>gi|193083083|ref|NP_001122374.1| zinc finger protein ZF(C2H2)-102 [Ciona intestinalis]
gi|93003104|tpd|FAA00135.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 710
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 183/402 (45%), Gaps = 51/402 (12%)
Query: 219 FRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
++ +L L + I Y KT E K T KK K + ++ + Y +D
Sbjct: 257 WKCNLTLGSHLSIPCCAYIKTKEAKLKQTWKKCHAKTHKKE-----DITSNIFYYIDDDE 311
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKD-V 335
V E KGY+YG ++ + + + +KF +K + +LGFTD N+ ++M D
Sbjct: 312 KTEVTKENLGKGYKYGKDIITFGTEDEKQMKFAACDKCLSILGFTDMRNVHVIHHMDDQA 371
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
++ I E G+ A A+SAL AM + N A+ V+R+G +V +L K+ +
Sbjct: 372 HVVIPEAGDEHAGTALSALCTAMVKQNLCAVACHVYRKGSNPKLVALLP-----KVKLGS 426
Query: 396 SFYFNV-LPFAEDVREFQFPS-FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
+ V LPFAEDVR F S FS + QP+E+Q + A++L+ +D S G I +
Sbjct: 427 HYLVMVSLPFAEDVRPLSFESLFSG--KNKQPSEEQLQLAEDLISSMDFTQSEDG-IFKA 483
Query: 454 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK-KITEPDPTLLAESQSAIDAFCGQFV 512
+ NP +R + L+ + +H D+ P L+ + ++ PT + ++ +D +F
Sbjct: 484 KEKMNPTFQRTFQCLDHRLKHPDSKLPDLNQLINDSVSISHPTSV---ETLLDKINEKFP 540
Query: 513 IKENPKLKKSTRRFLREKPSGSDEP--NGDGSVSDAQAVNSMESKPVVTVD--------- 561
+ L +KP S E N V+D E KP V+V
Sbjct: 541 V------------ILNKKPQTSHEAWINNKSDVADPDK----EEKPGVSVSAHIRNEQTT 584
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
IG +T QDF ++ P ++A + M+ +I + +S
Sbjct: 585 SIGTVTTDQDFVEILQNGSLPS--NEAFDQMEQRIKEFVSDS 624
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVEK---LC----SRLIQKKLIYGKNHEVGVILFGTEE 54
A +EALLL LDV M + LC S L+Q+K+ EV ++LFGT E
Sbjct: 3 ASKKEALLLCLDVGTGMKDSTNNQSTSLDLCIHVISTLVQRKIFSQSKDEVSLVLFGTNE 62
Query: 55 TENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVDMLIKK 112
T N L +E Y+++ + + + L+ L + L G DF+DA+ V +D L K+
Sbjct: 63 TSNPLNQEDEESYQNISIAFSLGCPNFELLHYLSNDLKPGVLETDFVDALTVSLDHLHKE 122
Query: 113 YGETYKGKKHLCLITDALCPLKDPDV 138
+ L T+ P D ++
Sbjct: 123 TRYKKISSCRIVLFTNFCHPTSDENL 148
>gi|312069749|ref|XP_003137827.1| ku P80 DNA helicase [Loa loa]
gi|307767009|gb|EFO26243.1| ku P80 DNA helicase [Loa loa]
Length = 614
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/595 (23%), Positives = 249/595 (41%), Gaps = 87/595 (14%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A + E ++L+DV +M+ + + + +I +K+ E ++LFG+E T
Sbjct: 14 ALSHECTVILIDVGANMNRKGIATTDMQLAKDTVEWIITRKIFTESADEFTLVLFGSELT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLV-QSLKHLPQGTCAGDFLDAIVVGVDML---IK 111
+N +T + + + +Q K+ L+ + +K P + GDFL A++ +D + ++
Sbjct: 74 QNPVTVDENIFFCEEEMQQAKIDWLRLIDKEIK--PSKSTNGDFLAALIAALDYMRNHLE 131
Query: 112 KYGETYKGKKHLCLIT---------DALC---------------PLKDPDVG-TKEDQVS 146
+ ++ +++ L+T D C + P +G ED+
Sbjct: 132 SWPKSNITARNILLVTNLGGFNENVDEECIGAVINGMKALEINFNVIGPSIGMVSEDEDK 191
Query: 147 TIARQMVAFGLRMKNIVVRASLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDSTT 202
I+ + K S EP RV+ + D ++ F++ FV
Sbjct: 192 IISNEESTIQPEEKLSNAMRSFKIEPAERVLTDILKQTDGVIYSFAEALPVLQHFVSRKV 251
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT-------GEEKFPTL-------- 247
+LRG + +LEL +K+ + +YKK EK+ ++
Sbjct: 252 NLRGQK------------FNLELGIDLKLPLQMYKKIQTTDFKLAAEKYASITGTRLKRK 299
Query: 248 ---KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW 304
+K D +V V + + SK+ E +KGY++G +VP ++ +
Sbjct: 300 TLYEKCVKDGEVDDGLTAMDVDVGRSDCASQGSSKIFAKEI-VKGYKFGTTIVPYNAEDQ 358
Query: 305 EAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPG-NSRATVAVSALARAMKEMN 362
+ +K E + +KL+ FT S IL HY M + P + A VA+SAL AM +
Sbjct: 359 KEYGWKHENRCLKLIQFTKRSQILEHYLMDGGACYFIPPALDKNACVAISALVNAMIAED 418
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
VA+ R V+ Q ++G L P S+K D F LPF ED R FP + P +
Sbjct: 419 SVALTRYVYNAASQPRIMG-LFPRRSKK--GVDMFVGIQLPFYEDFRGLNFPPLNS-PAT 474
Query: 423 WQPNEQQQEAADNLVKMLDLAP----SGKG---EILQPELTPNPALERFYHHLELKSEHQ 475
+P A + V+ +DL S G E L+P PNP L+ ++ ++ H
Sbjct: 475 -EPKNDHLSAMHSFVQAMDLTKAHFNSQTGQFEESLRPRDVPNPKLQNVCKAIKYRALHP 533
Query: 476 DAAPPPLDDS-LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE 529
+A P +D L + EP+ LL + ++ + E+P K+ + E
Sbjct: 534 NAPLPAFEDKLLGDLLEPNALLLKRANESLVYLKTNLPMFESPNKKQHIKEVKEE 588
>gi|328769384|gb|EGF79428.1| hypothetical protein BATDEDRAFT_89512 [Batrachochytrium
dendrobatidis JAM81]
Length = 840
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 169/725 (23%), Positives = 281/725 (38%), Gaps = 139/725 (19%)
Query: 27 KLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEVGGYEHVKVLQDI--KVVDGHLV 83
+L +R +Q +I G+ +V +I+ G+E +N L + Y+HV + ++ V
Sbjct: 39 QLVARQLQDLIINGRKGDVVSLIIVGSESADNPLAVD-DQYQHVSIYNYCHEQLFCMASV 97
Query: 84 QSLKHLPQGTCAG----DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG 139
K + G G D +D I+VG+ +L + + + + + + + A L+
Sbjct: 98 DMFKFVSNGCVVGGDYGDVMDGIIVGMHVL-ELHCKQLQFDRRMFVCAHAGGSLESDGYE 156
Query: 140 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM-RVIIENDNLLNIFSKKSSAKTLFV 198
+ + + G + V S+S PH+ + I S S +
Sbjct: 157 QVLHTATVMNLDFIMVGFNFPDPV---SISN-PHLANATFWRNFTCQIPSCTRSQPNRVL 212
Query: 199 D---STTSLRGARKTRDISPVTIFRGDLELS--EKMKIKVWVYKKTGEEKFPTLKKYSDK 253
D ++ L R +S ++ GDL E + I V Y KT K PT KK+S
Sbjct: 213 DPEEASVVLDQLRHHLTLS-APVYCGDLTFGTKEDLVIPVTCYLKTSGVKIPTSKKFSML 271
Query: 254 APSTDKFATHEVKVDY-------EYKSVED--------------PSKVVPPEQRIKGYRY 292
A D + +DY YK V+ + + PE I+ YRY
Sbjct: 272 AEEIDSELRAQYGMDYGAVKLTKTYKYVDGNDKDSDDASESDSVDASHIHPENVIRAYRY 331
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS 352
G V+P S + EA + +KS+K++GF + I RHYY+ + + +
Sbjct: 332 GKAVIPFSIQDEEAAQLLTKKSIKIIGFIKSDAIPRHYYISGTMAIVPNKDVRGTDIQFT 391
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK------INIP--DSFYFNVLPF 404
AL +AM + N VAI R R GVL +S K I IP D F F V P
Sbjct: 392 ALLQAMTKANIVAIAR-YCRINNAKPKFGVL---ISTKKGYGLFIQIPYADDFRFVVAPP 447
Query: 405 AEDVREFQFP---------SFSKFPVSWQPNEQQQ------------------------- 430
+D+ P S + VS + EQ
Sbjct: 448 IDDLTLATLPKTIQSISTESKTDMLVSIETEEQHNKEKDDSSTTISHHDISDTSSTGQIR 507
Query: 431 -----------------------EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 467
+A D+L+ +D++ G P+ NP +R
Sbjct: 508 YAQEHARYREKFLARKVSPQQAFDAVDSLIDAMDISVKSAGTSFNPKHVSNPLYQRLCDC 567
Query: 468 LELKSEHQDAAPP-PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK-----ENPKLKK 521
+ ++ H ++ P++ ++K+ EP L+ ++ AID F IK E PK K
Sbjct: 568 IAYRAIHPNSTDILPVNPTIKRNMEPRQELVEKAMPAIDQLRQAFTIKKVVDVEKPKKSK 627
Query: 522 S-----TRRFLRE---KPSGSDEPNGDGSVSDAQAVNSMESKPVV--------------T 559
R ++ +P+ D P D S++ +S +P+
Sbjct: 628 HVWADLAREMVKSENAEPTVRDHPADDTVASESTKASSYIGQPLSLSTHPATVKHITQRA 687
Query: 560 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 619
VD I L P+ +F++M+SR D ++V++A+ M + + L+ S Y KA L AL
Sbjct: 688 VDTISTLDPVSEFQSMVSRSD-GNYVEQAMTQMCHIVKTLIAESIGQAFYAKAFAALKAL 746
Query: 620 RKGCI 624
R C+
Sbjct: 747 RVECV 751
>gi|307203853|gb|EFN82789.1| ATP-dependent DNA helicase 2 subunit 2 [Harpegnathos saltator]
Length = 832
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 240/544 (44%), Gaps = 54/544 (9%)
Query: 5 REALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+ L+++ + H S L D EK + +IQKK+ EVG++L G++ +EN+
Sbjct: 13 QESLIFLINIGVTRHGTQSNSSLLDKEKFILKHIIQKKIFLHPKDEVGIVLMGSDSSEND 72
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
V G ++++ L +++ + +L++S+ L + +++ I V+ +
Sbjct: 73 ---SVTGMDNIRELSNMQFGNWNLIESIDKLQNTKQSSSWMEGIYAAVEYI--------- 120
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
KH CL + D +ED VS + L +NI + A G+ + I
Sbjct: 121 --KHECLDNSERKIMLLSDFNEEEDIVSQFEVDDIIKTLNSENIFLIAI--GKRQLNNID 176
Query: 179 ENDN------LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 232
E+ L + K + + F + + +R +++ + +R D+EL +
Sbjct: 177 EDSYTSSEALLKKVLEKGNGQYSTFEHAMSEVRFYKQSS--TKPKPWRCDMELGDFCIPI 234
Query: 233 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK-GYR 291
+ K E P +KK A +T T + + D +++ ++ + GY
Sbjct: 235 AGISKVMNEPMLPKMKKI---AKTTAADLTEKETLIKNIPQWTDKDRIIHTKEDMSYGYM 291
Query: 292 YGPQVVPISS-AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 350
YG + + +S E + EK K+ GFT N+ Y++ D ++ P + +
Sbjct: 292 YGSKPIFVSDDCEQSMIPKTSEKCYKIHGFTARENVPMEYWLSD-GTYVIIPADESVSAP 350
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
+L +AM E N VAI+ V+R+ ++ + L P+V + N P LPF D
Sbjct: 351 FYSLVKAMVEKNVVAIIEKVYRKNTEANMAA-LFPSVDDP-NEPWCLIEIGLPFERD--- 405
Query: 411 FQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPAL 461
+ + ++ P+ + Q +++Q A D+L+ L+L G+ P PNP
Sbjct: 406 --YGAIAQHPLKFMMKQLSQEQSNAVDDLLTSLELPEDADEDSTVDGDKYLPGCMPNPGA 463
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
+R + L ++ H D PP+ + +K + E ++ + A + F +++ K+
Sbjct: 464 QRMWDVLAARALHPDQPLPPITEDVKNLLEQPESVRENGKLACEKIKNLFSLEK--KISS 521
Query: 522 STRR 525
T+R
Sbjct: 522 RTKR 525
>gi|346467801|gb|AEO33745.1| hypothetical protein [Amblyomma maculatum]
Length = 344
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 164/352 (46%), Gaps = 33/352 (9%)
Query: 291 RYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSR 346
RYG +VP + A + K + +++LGFTD SNI RHYYM D +I A G+
Sbjct: 1 RYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMGDKTSYIVARKGDDC 60
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 406
A A+SAL +A+K+ VAIVR + + + +G L+P + E+ + F LP+ E
Sbjct: 61 AGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYME 116
Query: 407 DVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---SGK-GEILQPELTPN 458
D+R F F P+ P + Q D+L+ +DL +G+ E+ + T N
Sbjct: 117 DLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDINGEPEELFKSSQTSN 171
Query: 459 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 518
P L+RFY ++ ++ H PP+ + + ++A ++ + QF ++E
Sbjct: 172 PYLQRFYQCVQHRAMHPKDPVPPIPQHIADAIKTPKAVMALAEPILQKIASQFPLEEVAP 231
Query: 519 LKKSTRRFL------REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDF 572
+K + +++ + DEP + +D SM K+ + P++DF
Sbjct: 232 VKVPQDNGVGPNDHGKDQATNLDEPAPKRARTDV----SMADLVATATTKVDVVNPVEDF 287
Query: 573 EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ ++S ++ + ++ I L +++ + KAV L A R+ +
Sbjct: 288 KKLVSSKE--QSYSEVCHQLEEVILKLFKDALGRTAHGKAVRCLRAYRESAL 337
>gi|361124310|gb|EHK96413.1| putative ATP-dependent DNA helicase II subunit 2 [Glarea lozoyensis
74030]
Length = 679
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 210/472 (44%), Gaps = 78/472 (16%)
Query: 45 VGVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGD 97
VGV+ T+E+EN L + G Y+H+ V +++ + + SL K +P T AGD
Sbjct: 54 VGVLGLRTDESENSLYNDDDGPEDESYQHIAVHKELGPITLSDLGSLQEKLVPSQTEAGD 113
Query: 98 FLDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVS----TIA 149
+ AIVV ++M+ K G+ K + + L+TD + + D DQ++ +
Sbjct: 114 AVSAIVVAIEMVNKFTTLGTGKPAKSGRKIVLVTDGQGYIDNTDPNNL-DQIALRCNELG 172
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGA 207
+++ G+ ++ E EN+ LL + + + T+ +++ +L G
Sbjct: 173 IELIVLGIDFDDL--DYGFKEEDKSEQKRENEALLKSLTDQCNKGTIATLIEAIDNL-GV 229
Query: 208 RKTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
+ + + P F G L L + K I V Y KT KK S APS F
Sbjct: 230 PEIKSVRPYKAFGGRLALGDYEKYPETALYIDVLRYTKT--------KKAS--APSASSF 279
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
+ KS + V + KGY YG V IS+AE K + ++GF
Sbjct: 280 VNN--------KSAR--KRDVDRDDLAKGYEYGRTAVHISAAEENVTKMDTYEGFSIIGF 329
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + R+ M + + +A+ N +A VA+S+L A+ E++ A+ R V + ++ ++
Sbjct: 330 VPSESFERYLVMGESCMTVAQSVNEKAVVALSSLIHALHELDSYAVARIVLKDMKEPKII 389
Query: 381 ---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
V+ P+ ++P LPFAEDVR + P+++ +A ++ V
Sbjct: 390 LLAPVIEPDFEGLADVP-------LPFAEDVR------------IYLPSDELTDAMEDYV 430
Query: 438 KMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQDA--APPP 481
+DL+ GKGE +P E T +P + R + ++ + D PPP
Sbjct: 431 DAMDLSTFGKGEDGEPIEYMTMEETYSPTVHRINAAIRNRAIYPDEPIKPPP 482
>gi|154341439|ref|XP_001566671.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063996|emb|CAM40187.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 792
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 224/506 (44%), Gaps = 61/506 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
+++A +L+LD++ S + L + LC+R++ K++Y EV VIL GTE++ + L +
Sbjct: 2 SKDATVLVLDITLSRAAALEEACDLCTRILTDKMVYSPLDEVAVILAGTEKSRSALYDQS 61
Query: 64 GG--YEHVKV-------LQDIKVVDGHLVQSLKHLPQG-------TCAGDFLDAIVVGVD 107
G Y+H+ V + I V + LP G T A DF+DA+ V V
Sbjct: 62 GQARYQHITVAVELGPATEKILVPIAATRAGVVALPGGATVQRPITEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLRMKN 161
+L + + + + + L+TDA +V KED + I A Q +V G +
Sbjct: 122 LLQARTSQ-RRCNRCIYLLTDA-----RHEVRHKEDLLFLIDALQHDQITLVVIGFDFQA 175
Query: 162 IVVRA--------SLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDSTTSLR--GA 207
+ S +G+ V + +N+ +L + + + +L
Sbjct: 176 LPAGTASQEECDESSTGDTSAWVGLDRKAQNEKVLGALCTELGPPSTLISPAEALDRLSL 235
Query: 208 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
R I +F+ L + + +++ ++ T EE+ P L++ ST A V
Sbjct: 236 LHCRKIRQQPMFKIALRIGD-VRLATQLFTLTQEERLPALRR------STQDGADVVQSV 288
Query: 268 DYEYKS-VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 326
+Y S V++ + + E+R++ + +G V S A+ E +K K ++++ +GF + +
Sbjct: 289 EYVTPSDVDEQPRALAKEERMEVFFFGADRVSCSEADREEMKVKGPRALEAIGFVGETEV 348
Query: 327 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
M + G+ +AL AM K +VR V R + ++ V
Sbjct: 349 EPCLLMGGTRALLPLAGDHAGQRGFNALVDAMVSSGKAMLVRLV-RTAHATPLLCVCFAR 407
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAADNLVKMLDLAPS 445
V+E + LPFAED+R + FS++P V + E+Q D L+ L S
Sbjct: 408 VAETASGQRHLVLAPLPFAEDMRALR---FSEYPEVRFSKAEEQ--LMDELIDGL----S 458
Query: 446 GKGEILQPELTPNPALERFYHHLELK 471
G +L P+ T NP L+++Y L+ K
Sbjct: 459 VDGSVLAPQDTFNPVLQQYYATLQAK 484
>gi|256086585|ref|XP_002579478.1| ku P80 DNA helicase [Schistosoma mansoni]
gi|353229680|emb|CCD75851.1| putative ku P80 DNA helicase [Schistosoma mansoni]
Length = 833
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 214/473 (45%), Gaps = 56/473 (11%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGY 66
AL ++LDV M+ + + L++KK EV +IL G++ T+N L E G +
Sbjct: 4 ALGVVLDVGIHMNPNFREAVECVRLLLEKKFFAESKDEVALILCGSDATDNALADEEGSF 63
Query: 67 EHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGK-KHLCL 125
+++ + ++ + +++ L GD +DA++VG D L + K KHL L
Sbjct: 64 QNICLAFELAPISWKVLEFLDPELLSLSTGDVVDALMVGADHLFNRCKNKKNIKEKHLLL 123
Query: 126 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------------VRASLSG 170
+++ + D DV + + + + G +K + V L
Sbjct: 124 VSNLYGSVDDSDVSRVSESLQSSGIKFSLIGCDLKKSINVTPENRDEPGPSHAVSHHLHH 183
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG---DLELSE 227
P R I L ++ + + F D+ T+L +TR + + RG L++ +
Sbjct: 184 SPKTRPSIS--FLAELWDQLNGESYDFSDAVTAL-SIFETRSV----LQRGWNVSLQIGD 236
Query: 228 KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE-DPSKVVPPEQR 286
+ I V Y E PT++ P T ++ +Y++ + DP + E
Sbjct: 237 SITIPVVGYTYIKEAHPPTMRIMYAPDP------TLPLRAVTKYRTQDPDPCDLNSSEV- 289
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEP--- 342
+GYRYG VVP + ++K EK ++GFT A NI ++Y + V +F+A+
Sbjct: 290 TRGYRYGGTVVPFGEEDMASIKPPSEKCFSVIGFTSADNIPHNFYTGESVLVFVAQSVKQ 349
Query: 343 ------GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPD 395
A++ALA+A+ E++ VA+VR V+ Q + +GVLTP + ++I
Sbjct: 350 SEDDVTNRPSCPTALAALAQALYEVSGVALVRRVYNQ-PSAARLGVLTPEIHGDQI---- 404
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA---ADNLVKMLDLAPS 445
S + + F+ED+R+ + PS PVS +P+ E + N +K+ PS
Sbjct: 405 SLMYTDIAFSEDIRDLKLPS---LPVSCEPSTSTTECFVKSSNTMKLSKNCPS 454
>gi|189188602|ref|XP_001930640.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972246|gb|EDU39745.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 733
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 143/638 (22%), Positives = 264/638 (41%), Gaps = 91/638 (14%)
Query: 49 LFGTEETENELT---KEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLD 100
+ G E++L +E GYE+++V ++K +L+ +++L P T GD L
Sbjct: 55 VIGCRTDESDLAGTMEESEGYENIRVFSELK---QYLLGDIRNLQEQLKPSNTNDGDLLS 111
Query: 101 AIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVA 154
A+VV + M+ G K + + ++TD + D+ ++ A ++V
Sbjct: 112 ALVVAIHMVENATKGAKGNPLKYDRRIIIVTDGRGQMVTDDLEELATKIKDPAAPFEIVL 171
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 214
GL + V G+ + +N+ +L F + + + ++
Sbjct: 172 LGLDFDDAEVDFKEEGKEPQKA--QNEEILRSFVDDCDGNFGTLATAIDQLHVPRLKETR 229
Query: 215 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 250
PV +RG L L + + I V Y T K PT +
Sbjct: 230 PVHNYRGSLTLGDPQNYEATITIDVERYPCTMLAKPPTASSFIVQGDVKDESGQSGQSSM 289
Query: 251 ---SDKAPSTDKFATHEVKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWE 305
D P+TD A H ++ Y+ + P V E+ +G+ YG V IS ++
Sbjct: 290 TMTGDNPPTTDLSAVHNSRI-YQVDDKDHPGTKTTVEMEELERGFEYGRTAVHISESDMN 348
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 365
VK + ++S+ L+GF A R+ + N + + N A + +S+ A+ E + A
Sbjct: 349 VVKLETQQSLDLVGFIKAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYA 408
Query: 366 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSW 423
I R V + + V++ + +I + +V LPF ED+R ++FP K VS
Sbjct: 409 IARLVAKDLKPPVLL-----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSG 463
Query: 424 Q--------PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLE 469
+ P + +A V +DL+ G+ E +PE T +P + R H ++
Sbjct: 464 KTITEHKDLPTDDLLDAMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRINHVIQ 523
Query: 470 LKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTR 524
++ H + P D + L K + P LLA ++ ++A +K+ P K + +
Sbjct: 524 WRATHPEPGLPIPDPPEILLKYSVPPAALLASTEKHLEALEKAADVKKVPPKVKGRGKRQ 583
Query: 525 RFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
R R+KP SG D V+ + KP + +L P F+ + D +
Sbjct: 584 RAERDKPLSGLD-------------VDELLGKPKRVKIEANNLIP--SFKQALDVCDTVE 628
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
+ +A + + ++ L+ NS Y +A+E + +R+
Sbjct: 629 AIQEAADSIAKEVRSLISNSVGDSAYARALEAIRVMRE 666
>gi|384497794|gb|EIE88285.1| hypothetical protein RO3G_12996 [Rhizopus delemar RA 99-880]
Length = 660
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 244/579 (42%), Gaps = 63/579 (10%)
Query: 45 VGVILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQG---TCAGDFLD 100
VIL GT ET+N +E G Y+H+ ++ L++ + + T D LD
Sbjct: 4 ASVILAGTHETDNPCAEESPGQYQHISTSCPLQQPSLDLLRKIAKIQPSQDPTTTPDVLD 63
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
A+++ + M++ + + K +K + + TDA + D E S + + +
Sbjct: 64 AVIIAIQMIVT-HCKKLKYEKCVAVFTDAKHKI---DWLDYEAISSALQENSITLLINGV 119
Query: 161 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFR 220
+ R S P +++ + + S+ VD + +++ P +R
Sbjct: 120 DYHQRNDPSSPPEVQMNYKY--WKELASQTPEGHVWEVDEMYDEIHRLRVKEVRPTPSYR 177
Query: 221 GDLELSEK-----MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
G L L + I + +Y + E K PT KYS + T+E + Y +
Sbjct: 178 GFLYLGNPTHENYLAISINMYLRVKEVKLPTADKYSKLSTGPSHAVTYETR--YTVNNTT 235
Query: 276 DP-----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 330
DP KVV E KG+R+G Q V +S+ E E K K +K + +LGF SN R Y
Sbjct: 236 DPMNNEIEKVVSKEDLEKGFRFGKQRVKVSAEEEEYGKLKTKKEMTILGFIPKSNFPR-Y 294
Query: 331 YMKDVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
Y+K + ++ G R T +A+SA+A A+ E + +A V+ V + + +G+L P
Sbjct: 295 YLKS-HPYVVAAGVHRPTESGMAISAIAYALHETDTLAFVKYV-SKDDGAPKIGLLFPCF 352
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
E I + + +PFA DV + F S P + +++ + D L+ +DL
Sbjct: 353 DENITL---LQYVEVPFAGDVNTYIFRS---IPSVIKRDDEADKMMDELIDEMDLNKLTD 406
Query: 448 GE---ILQPELTPNPALERFYHHLELKSEHQDAAPPPL-DDSLKKITEPDPTLLAESQSA 503
E L P T NP R ++ ++ + A P + D + P+P A +
Sbjct: 407 EEGNKYLDPNDTFNPVFWRINKAIKSRALNTSAPIPDMPKDFSPEFDTPEP-FKARLKLI 465
Query: 504 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK-------- 555
D F IK+ + EK D D ++ + K
Sbjct: 466 SDKLASHFDIKK-----------VEEKGKKRDYAEADEESKTLVPIDELVQKNKFAKIQH 514
Query: 556 PVVTVDK-IGDL---TPIQDFEAMMSRRDCPDWVDKAIE 590
P + V K I D+ TP++DF+AM+S + D V + IE
Sbjct: 515 PSIAVQKGILDITINTPVEDFKAMISHTES-DLVSEVIE 552
>gi|444708075|gb|ELW49194.1| X-ray repair cross-complementing protein 5 [Tupaia chinensis]
Length = 652
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 229/535 (42%), Gaps = 91/535 (17%)
Query: 16 PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI 75
P S +K+ + +Q+++ E+ ++LFGT+ T N L E Y+++ V + +
Sbjct: 12 PGEESAFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDGTNNTLADE-DQYQNITVHRHL 70
Query: 76 KVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
+ D L++ ++ Q G+ DFLDA++ M+ K+ G +G L +D P
Sbjct: 71 MLPDFDLLEDVESKIQPGSQQSDFLDALI----MIDKEDGTGDRGDGKL--RSDHHGP-S 123
Query: 135 DPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
P G E Q + QMV KN+++ SL G+ D L I+S S +
Sbjct: 124 FPQKGLTEQQKEGV--QMV------KNLMM--SLEGK---------DGLDEIYSFSESLR 164
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT-LKKYSDK 253
L V + R+ P + L + + IK+ YK +P L S+
Sbjct: 165 QLCV-------FKKIQRNSVP---WPCQLTIGSNLAIKIVAYKSRNSVPWPCQLTIGSNL 214
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 312
A +K+ YKS+ + GYRYG +VP S + E +K+K E
Sbjct: 215 A----------IKI-VAYKSMLFSCSL--------GYRYGSDIVPFSKVDEEQMKYKSEG 255
Query: 313 KSVKLLGFTDAS----------NILRHYYMKD----VNLF--------IAEPGNSRATVA 350
K +LGF +S I++ + +D +NLF A + A VA
Sbjct: 256 KCFSVLGFCKSSEVPINLFTGYQIVKVFAARDDEVPINLFTGYQIVKVFAARDDEPAAVA 315
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 410
S+L A+ E++ VAI+R + + + VG+ P++ + + + LPF ED+R+
Sbjct: 316 FSSLVHALDELDMVAIIRYAY-HNKSNPQVGMAFPHIKDTY---ECLMYVQLPFMEDLRQ 371
Query: 411 FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFY 465
+ F SF + P E Q A D L+ + L + E +L PNP +R +
Sbjct: 372 YMFSSFRN-SKKYIPTEAQLSAVDALIDSMSLVKKNEEEDTVEDLFLTTKIPNPQFQRLF 430
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
L ++ H PP+ + + +P + A+ Q ++ F + E K K
Sbjct: 431 QCLLYRAFHPQEPLPPIPQHIVTMLDPPAEVTAKCQDSLSKIKTLFPLTEAVKTK 485
>gi|449669936|ref|XP_002157022.2| PREDICTED: uncharacterized protein LOC100208923 [Hydra
magnipapillata]
Length = 1177
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 12/294 (4%)
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
++F+A+P + A VA SAL RA+ E N VAIVR V R +G LTPN+ +
Sbjct: 69 HIFVAQPDDEYAAVAFSALCRALDEKNMVAIVRYVSRSNNDP-KIGFLTPNIKSSY---E 124
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 455
S F LPF ED+R +QF SF +P+E+ A D+ + + L + E+ P+
Sbjct: 125 SLLFIALPFKEDIRHYQFASFKNVK---EPSEEAIAAMDSFIDSMTLIKND-TELFNPKD 180
Query: 456 TPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 514
NP ++R + ++ ++ + D P +++ + P +LA +Q F ++
Sbjct: 181 LVNPYMQRQFQCIQHRALNPDDTTIPEVEEYIASSLRVIPEMLANAQEQASIIKKNFPLQ 240
Query: 515 ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEA 574
E + +K+ F ++ +D D ++ D ++ + + S + ++G P+ DF
Sbjct: 241 ELKQKEKNVNMF--QQGGINDTEYNDNNMGDNESRDFLSSLTKSCLKEVGTADPVNDFLT 298
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQV 628
++ D +V+ E M+ I L+ NS + KA++ LR+ I ++V
Sbjct: 299 LIENADNDKFVE-VCEQMRKSILKLVLNSFLSQYFIKAIQATKTLREQSIAKRV 351
>gi|402086941|gb|EJT81839.1| hypothetical protein GGTG_01813 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 727
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 160/679 (23%), Positives = 271/679 (39%), Gaps = 88/679 (12%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
+E + ++D+ SM V PD++ KLC+ + + K +VGV+
Sbjct: 4 KEVTVFIIDLGQSMGDCNGGRVEPDLDWSMRYVWDKLCTIVAASR----KTWQVGVVGLR 59
Query: 52 TEETENELTK-EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVG 105
T++T N K GYE++ VLQ + + + SLK L P T +GD + AIVV
Sbjct: 60 TDDTNNIHHKGHEDGYENISVLQPVGPMS---MTSLKELRGQIAPSNTNSGDAISAIVVA 116
Query: 106 VDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+D++ + K K+ + L+TD P+ + + +++ + ++ G+ +
Sbjct: 117 IDLIDNAAPQRLKYKRKIVLVTDGQGPMDEDSLEDIWARINQLNIELTVVGVDFDD--AD 174
Query: 166 ASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
E RV N+ LL + K + ++ L+ R + P F G L
Sbjct: 175 YGSKEEDKTRVKTTNEKLLRTLTGNCKDAVFGTMAEAVEELQNPR-IKTTRPYKTFDGQL 233
Query: 224 EL-------SEKMKIKVWVYKKT-----------------GEEKFPTLKKYSDKAPSTDK 259
L S + I+V Y KT + T++ D + D
Sbjct: 234 TLGDPKAYGSSALSIRVERYFKTKAAHAVSASTVVVKSEDATQSTRTVRGEEDDSVPADG 293
Query: 260 FATH-EVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
T + +Y+ K P + V E KGY YG V IS +E K + K
Sbjct: 294 MLTGLQTARNYQIKDESAPGGKRDVKFEGLAKGYEYGRTAVHISESEHNITKLETTKEFT 353
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
++GF M + + +A + + VA+SAL A+ + A+ R V + G+
Sbjct: 354 IIGFIPKEKFEPFLSMGEACVTLAAKFSEKDEVALSALINALYDTESYAVARLVTKDGKD 413
Query: 377 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 427
+V +L P + + Y LPFAED+R +QFP K +S Q P++
Sbjct: 414 PQLV-LLMPESDVEF---ECLYDVPLPFAEDLRHYQFPPLDKVVTLSGQTMTTHRLLPSD 469
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPP 481
++A + V +DL+ G+ +P E P +P + R + + H D P
Sbjct: 470 ALEQAMSDYVDAMDLSSYNTGDDDEPSEYAPIDETFSPMIHRVNQAIRQRVVHPDKPIQP 529
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 541
L + + P L+ E+ I +K+ P K R+ KP
Sbjct: 530 ATGILTRYSMPPEKLVDEAADQIKELIRIADVKKVPPKVKGKRQRETVKPM--------- 580
Query: 542 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 601
S D A+ E KI + +F+ M++ D ++ A M I L++
Sbjct: 581 SGLDVDALLGKEGPKKRA--KITAENSVPEFKQMLAVADEVSTIEDAARQMGVIIRDLIQ 638
Query: 602 NSNEGINYPKAVELLVALR 620
NS NY +A E + +R
Sbjct: 639 NSMGDANYDRATENMRVMR 657
>gi|403337575|gb|EJY68009.1| Ku P80 DNA helicase, putative [Oxytricha trifallax]
Length = 854
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 192/431 (44%), Gaps = 78/431 (18%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 276
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNFKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 277 PSKV-VPPEQRIKGYRYGPQVVP----ISSAEWEAVKFKP---EKSVKLLGFTDASNILR 328
K+ +P EQ IK + Y Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITIPSEQDIKAFNYEKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
+ + + N R A + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRRSFNER---AFAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
E+ N + LP E+ R++QF S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYQFLSL--YPAS----RNHMQAAMELIKALDFH---KK 346
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE---PDPTLLAESQSAID 505
+LQ ++++ L D K I E D L +
Sbjct: 347 RLLQS---------------NRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTMPKRK-- 389
Query: 506 AFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGD 565
Q +K++ +TR+ +R G + + DG+V + IG+
Sbjct: 390 ----QAPLKKHSIRSTTTRKRIRNNGGGFEFKDNDGAVKE-----------------IGN 428
Query: 566 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
+ PI+DF+ M++ R D V AI+ +K+ I L+ NS G Y KA+E L +LR+ CI
Sbjct: 429 VNPIEDFKKMVTDRKV-DRVGTAIDQIKDMITKLVNNSLNGDLYHKAIECLASLREACIT 487
Query: 626 EQVYLSVSFFL 636
E + F+
Sbjct: 488 EDEAQEFNLFM 498
>gi|327356138|gb|EGE84995.1| Ku80 [Ajellomyces dermatitidis ATCC 18188]
Length = 741
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 270/637 (42%), Gaps = 76/637 (11%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ E+ VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIEEIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFA 261
+ F+GDL L S + I+V Y +T + P + S+ +T A
Sbjct: 223 RSMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSA 282
Query: 262 THEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPIS 300
T K V SV + + V ++ KGY YG V I+
Sbjct: 283 TLAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHIT 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-F 419
+ A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 403 LECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDKVI 458
Query: 420 PVSWQPNEQQQEAADN--LVKMLDLAPS-------GKGEILQP---ELTPNPALERFYHH 467
VS + + + +N L +M D S GE ++ E + +P L R
Sbjct: 459 TVSGKTVTEHRNLPNNNLLSRMADYVDSLELTEKDEDGETVESMSIEDSFSPLLHRIDQA 518
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ H PP+ + L+K++ L A+S+ + +K+ P K
Sbjct: 519 IRWRAVHPSEPLPPVPEILQKLSHQPEDLQAQSKDTLAKLIAASDVKKVPPKAKG----- 573
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
R++ +D+P +S ++++ V KI I +F+ ++ V
Sbjct: 574 RKRDRDTDKP-----LSGLNVEELLQTEKRV---KISANNAIPEFKQLLVSSQDLGAVKD 625
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
A++ M I + +S NY +AVE L +++ +
Sbjct: 626 AVKQMSAIIESQIRHSLGDANYDRAVEGLGTMKEELV 662
>gi|320588005|gb|EFX00480.1| ku family DNA-binding protein [Grosmannia clavigera kw1407]
Length = 734
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 152/647 (23%), Positives = 274/647 (42%), Gaps = 73/647 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K VGV+ T+ET N L E GYE++ VLQ+++ + +++L + P T GD
Sbjct: 49 KTWTVGVLGLRTDETRNPLQGE-DGYENIAVLQEVEPMSLTSLRALGSRIQPSSTKTGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AI+V DM+ K + K + + L+TD L P+ D Q++ + Q++ G+
Sbjct: 108 VSAIIVATDMISKAAPKRLKFNRKIVLVTDGLGPIDGDDFDDLAFQLNELDIQLIVVGVD 167
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK--TRDISPV 216
+ +P ++ I N+NLL +K S +++F +++ + + P
Sbjct: 168 FDDAEFGFKEENKPPLK--IYNENLLQSLVEKCS-RSVFGTMAEAIKEMDRPNVKPYRPY 224
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF-------ATHEVKVD- 268
+ G L L + + + E+F L K + P+T AT +D
Sbjct: 225 KTYDGPLTLGNPESYESALSIEV--ERF-FLTKVARPPPATTVVVNTEADGATQSTPIDP 281
Query: 269 --------YEYKSVEDPS--KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAV 307
++ V++ V+ P ++ KGY YG V IS +
Sbjct: 282 MGGIEIGGSDFSKVQNTRVYSVIDPRAPGGKLEVDFDELEKGYEYGRTAVHISETDRNIT 341
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ K K + ++GF N M + + + + + VA SAL AM E A+
Sbjct: 342 QLKTLKGLSIVGFISQDNYEPFLNMGESCIILPRKFSEQDEVAFSALIHAMIETKTYAVA 401
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ--- 424
R V + ++ ++ +L P V+E I FY LPFAEDVR + FP K +
Sbjct: 402 RFVAKDMKEPQLL-LLFPTVAENIV---CFYDVPLPFAEDVRTYPFPPLDKVITATGSVL 457
Query: 425 ------PNEQQQEAADNLVKMLDLAPSGKGEILQP----ELTPN--PALERFYHHLELKS 472
P+++ +A + V +D++ G + QP +L N P + R L ++
Sbjct: 458 SKHRLLPDDKLNQAMSDYVDAMDISMFGTDDEGQPAEYVDLADNYSPIIYRVNKALAFRA 517
Query: 473 EHQDAAPPPLDDS-LKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLK-KSTRRFLRE 529
H D +D+ + + P L+ +++S I++ +K+ PK K +++R
Sbjct: 518 VHPDEPFVQVDNEFVTRFDHPPQELVRQAKSQIESLIKVADVKKVPPKAKGRASRNAAAN 577
Query: 530 KP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
KP SG D G+ + A++ + KI I +F+ ++ +
Sbjct: 578 KPLSGLDVDALLGTPAAAKSGKAT---------KISKENAIPEFKQALAGTVDVKQISDL 628
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI-LEQVYLSVSF 634
M + L+ +S I+Y + E + +R+ I LE+ L F
Sbjct: 629 TAQMGEVVRSLITSSTGDIHYARVAENMRVMREELISLEEPALYNQF 675
>gi|302673880|ref|XP_003026626.1| ku80-like protein [Schizophyllum commune H4-8]
gi|300100309|gb|EFI91723.1| ku80-like protein [Schizophyllum commune H4-8]
Length = 838
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/565 (22%), Positives = 233/565 (41%), Gaps = 86/565 (15%)
Query: 31 RLIQKKLIYG--KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
+L +++IY K + GVI+FG +ET N + + GGYE+V ++ + + L
Sbjct: 54 KLKIQEMIYNGRKTDKCGVIIFGCDETNNPVNEREGGYENVSEYIPVEQPNSSTIAKLDE 113
Query: 89 LPQGT-CAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST 147
L GD +DA++V V M + + + ++TD P++ D +++
Sbjct: 114 LRASEDSTGDPMDALIVAVQMQDEVLNSKKTWTRKITIVTDGESPMELEDWEATVQKINE 173
Query: 148 IARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN--DNLLNIFSKKSSAKTLFVDSTTSLR 205
+ ++ G+ + +PH++ EN ++ S T+
Sbjct: 174 LGVRLAVVGIDFDSEEYGYHQENKPHVKSTNENFWTQFTSLLSHGVVGTCEEALEDTAAP 233
Query: 206 GARKTRDISPVTIFR-GDLELSEK--MKIKVWVYKKTGEEKFPTLKKYS-----DKAPST 257
++T+ + + R GD++ + ++I V K T ++ + KK++ D++ +
Sbjct: 234 DVKETKSVLMSNVLRLGDVDNRPETALEIIVRTAKCTAMQRPKSWKKFAPRVKGDESEAE 293
Query: 258 DK-------------------------FATHEVKVDYEYK-----------SVEDPS--- 278
DK +T +V +D + + +EDP
Sbjct: 294 DKPDEDMEKDDDSIRKAKQAKGEDANAASTQDVNMDADDEDGDDSDAEEVLDLEDPQVRA 353
Query: 279 ---KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
V E ++G++YG P + K +K + F N R M +V
Sbjct: 354 TYYDEVERETLVRGFKYGTSYAPCPEGHFP--KLNTKKGIDFCAFFKRDNFRRELVMGEV 411
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
A+P R +A+S++ RAM + AI R V + G +GVL P K D
Sbjct: 412 QYIWADPAQPRQQIALSSIIRAMFKEKVYAIGRWVGKDGADP-KMGVLAPC---KFPDVD 467
Query: 396 SFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKMLDLAP 444
+ +PFA+DVR++ FPS ++ P + P E Q A D+ V +DL
Sbjct: 468 CLLWAPMPFADDVRKYTFPSLMNLLNKKGERVTEHP--YIPTEAQCAAMDDFVDSMDLME 525
Query: 445 SG-------KGEILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
+G +G+ + NPAL R +H + + +D PPP D ++ P+
Sbjct: 526 AGEKDDDGKRGQWFTTIESYNPALHRTKQAMFHGAVVHNLDKDPVPPPHPDIVRFFDPPN 585
Query: 494 PTLLAESQSAIDAFCGQFVIKENPK 518
+L +++ A++ + +K+ PK
Sbjct: 586 -RVLRKARDALETAKRELKVKQVPK 609
>gi|258568132|ref|XP_002584810.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906256|gb|EEP80657.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 713
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 245/581 (42%), Gaps = 68/581 (11%)
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T GD + +I++ +DM I+++ + K K+ + L+TD + + ++
Sbjct: 82 PSKTTEGDAISSIILAIDM-IERFCKRLKYKRRIILVTDGKGQMDSDGIDGIVTKIKDEG 140
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+++ G+ + + E IEN+ L + + + +
Sbjct: 141 IELIILGVDFDD--PDYGVKEEDKDPQKIENEATLKHLADRCDGMFGTLAQAIDEMSIPR 198
Query: 210 TRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
+ + FRGDL+L + + ++V Y +T + PT + D+
Sbjct: 199 IKIVRSNPSFRGDLKLGDPEHYSIALTVQVERYYRTYVARPPTASAFVLSTALLDRREAA 258
Query: 264 EVKVDYEYKSVEDPS--------------------------KVVPPEQRIKGYRYGPQVV 297
E + +S +P+ + VP + KGY YG V
Sbjct: 259 ESATLRDGESSAEPADPSANLTSVRNARSYQVDDKDAPGGKRDVPRDDLAKGYEYGRTAV 318
Query: 298 PISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA 357
IS ++ K + +++ +GF D N R+ M +VN+ + + N +A++A+S++ A
Sbjct: 319 HISESDENITKLDTDAALEFIGFIDNENYKRYMSMSNVNVIVGQKLNEKASLALSSIVHA 378
Query: 358 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS 417
+ E+ AI R V ++G+ +VV +L P + + LPFAEDVR ++FP
Sbjct: 379 LFELECYAIARLVTKKGKPPLVV-LLAPLIELGF---ECLLEVQLPFAEDVRSYRFPPLD 434
Query: 418 KF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFY 465
+ VS + P+++ +A D VK +DL+ G L+ E + +P L R
Sbjct: 435 RIVTVSGKVVKEHRNLPSDELLDAMDKYVKNMDLSELDNGNPLESMALEDSFSPLLHRID 494
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTR 524
+ ++ + PP+ L K++ L+ +SQS++ +K+ P++K R
Sbjct: 495 QAIRWRAVRPTESLPPIPKILDKLSHFPERLIDKSQSSLKGLISVSAVKKVPPRVKGRKR 554
Query: 525 RFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
+KP SG N D + + + KI PI +F+ ++ +
Sbjct: 555 NRDVDKPLSGL---NVDELLRGEKRL------------KISPENPIPEFKQTLANTEDVS 599
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+++A++ M + + S +NY + +E + +R+ I
Sbjct: 600 AIEEAVKQMSVIMETQIRESVGDVNYDRTIEGIGTMREELI 640
>gi|295664851|ref|XP_002792977.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278498|gb|EEH34064.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
Length = 719
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 150/687 (21%), Positives = 288/687 (41%), Gaps = 95/687 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMADCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAIVVGVDMLI 110
++N L +E Y ++ V QDI + ++ L+ + T GD + ++++ +DM++
Sbjct: 63 SDNPLWEKEEEESYANLTVFQDISQIHMPQIRELRKAIKISNTTEGDAISSLILAIDMIV 122
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRAS 167
+ Y + K ++ + L+TD + D E VS I + +V G+ +
Sbjct: 123 R-YCKKLKYRRKIVLVTDGTGAM---DTDGMEGIVSKINEENIELVVLGVDFDD--PEYG 176
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL-- 225
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 177 FKEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEVEIPRTKVVRSMPTFKGDLRLGD 236
Query: 226 ----SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT------------- 262
S + I+V Y +T + P + S+ +T AT
Sbjct: 237 PEQYSSALTIQVERYYRTYAARPPAASSFVPSSVLSEAHQTTQSSATLGGGAWSQESGTG 296
Query: 263 ----HEVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
V+ Y K + + ++ KGY YG V I+ ++ K + + +
Sbjct: 297 PASLTSVRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAA 356
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G
Sbjct: 357 LEFIGFIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAG 416
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQ--- 430
+ +VV +L P++ + LPFAEDVR ++FP + VS + + +
Sbjct: 417 KAPLVV-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFPPLDEVVTVSGKTVTEHRNLP 472
Query: 431 ------EAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPP 481
AD + KM GEI++ E + +P L R + ++ H PP
Sbjct: 473 SVNLLSRMADYVDKMELTEKDEDGEIVESLSIEDSFSPLLHRIDQAIRWRAVHPSDPLPP 532
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFC-GQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 540
+ ++L++++ L A+S+ ++ V K PK K R EKP
Sbjct: 533 VPEALQRLSRQPEELQAQSKKELNKLVEASDVKKVPPKAKGRKRARDTEKP--------- 583
Query: 541 GSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIF 597
++ + + ++ +K ++P I +F+ ++ D V A++ M I
Sbjct: 584 --------LSGLNVEELLQTEKRVRISPDNAIPEFKQSLANSQNLDTVKDAVKQMSTIIE 635
Query: 598 GLLENSNEGINYPKAVELLVALRKGCI 624
+++S NY +AVE L +++ +
Sbjct: 636 NQIKHSLGDANYDRAVEGLGTMKEELV 662
>gi|261203883|ref|XP_002629155.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239586940|gb|EEQ69583.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239608829|gb|EEQ85816.1| protein Ku80 [Ajellomyces dermatitidis ER-3]
Length = 727
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 269/637 (42%), Gaps = 76/637 (11%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MV 153
D + ++++ +DM+++ Y + K K+ + L+TD + D+ E VS I + +V
Sbjct: 109 DAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DIDGIEGIVSKINEENIELV 164
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 213
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 165 ILGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVV 222
Query: 214 SPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFA 261
+ F+GDL L S + I+V Y +T + P + S+ +T A
Sbjct: 223 RSMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSA 282
Query: 262 THEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPIS 300
T K V SV + + V ++ KGY YG V I+
Sbjct: 283 TLAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHIT 342
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E
Sbjct: 343 ESDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFE 402
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-F 419
+ A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 403 LECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDKVI 458
Query: 420 PVSWQPNEQQQEAADN--LVKMLDLAPS-------GKGEILQP---ELTPNPALERFYHH 467
VS + + + +N L +M D S GE ++ E + +P L R
Sbjct: 459 TVSGKTVTEHRNLPNNNLLSRMADYVDSLELTEKDEDGETVESMSIEDSFSPLLHRIDQA 518
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ H PP+ + L+K++ L A+S+ + +K+ P K
Sbjct: 519 IRWRAVHPSEPLPPVPEILQKLSHQPEDLQAQSKDTLAKLIAASDVKKVPPKAKG----- 573
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
R++ +D+P +S ++++ V KI I +F+ ++ V
Sbjct: 574 RKRDRDTDKP-----LSGLNVEELLQTEKRV---KISANNAIPEFKQLLVSSQDLGAVKD 625
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
A++ M I + +S NY +AVE L +++ +
Sbjct: 626 AVKQMSAIIESQIRHSLGDANYDRAVEGLGTMKEELV 662
>gi|225684065|gb|EEH22349.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 148/682 (21%), Positives = 289/682 (42%), Gaps = 90/682 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMANCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDFLDAIVVGVDMLI 110
++N L +E Y ++ V QDI ++ ++ L+ + T GD + ++++ +D+++
Sbjct: 63 SDNPLWEKEEEKSYANLTVFQDISQINMPQIRELRKAIKISNTTEGDAISSLILAIDLIV 122
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRAS 167
+ Y + K K+ + L+TD + D E VS I + +V G+ +
Sbjct: 123 R-YCKKLKYKRKIVLVTDGTGAM---DTDGMEGIVSKINEESIELVVLGVDFDD--PEYG 176
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL-- 225
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 177 FKEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGN 236
Query: 226 ----SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT------------H 263
S + I V Y +T + P + S+ +T AT
Sbjct: 237 PEKYSSALTILVERYYRTYAARPPAASSFVPSSVLSESHQTTRSSATLGGESGTGAASLT 296
Query: 264 EVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
V+ Y K + + ++ KGY YG V I+ ++ K + + +++ +G
Sbjct: 297 SVRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAALEFIG 356
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +V
Sbjct: 357 FIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAGKAPLV 416
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQ-------- 430
V +L P++ + LPFAEDVR ++FP + VS + + +
Sbjct: 417 V-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFPPLDEVVTVSGKTVTEHRNLPSVNLL 472
Query: 431 -EAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
AD + KM GEI++ E + +P L R + ++ H PP+ + L
Sbjct: 473 SRMADYVDKMELTEKDEDGEIVESLSIENSFSPLLHRIDQAIRWRAVHPSDPLPPVPEVL 532
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL-REKPSGSDEPNGDGSVSD 545
++++ L A+S+ ++ +K+ P K +R EKP
Sbjct: 533 QRLSRQPEELQAQSKKELNKLVEASDVKKVPPKAKGRKRVRDTEKP-------------- 578
Query: 546 AQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 602
++ + + ++ +K ++P I +F+ ++ D V A++ M I +++
Sbjct: 579 ---LSGLNVEELLRTEKRVRISPDNSIPEFKQSLANSQNLDTVKDAVKQMSTIIENQIKH 635
Query: 603 SNEGINYPKAVELLVALRKGCI 624
S NY +AVE L +++ +
Sbjct: 636 SLGDANYDRAVEGLGTMKEELV 657
>gi|407417188|gb|EKF37990.1| KU80 protein, putative [Trypanosoma cruzi marinkellei]
Length = 746
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 140/688 (20%), Positives = 284/688 (41%), Gaps = 82/688 (11%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEETENE----LTKEVGG--YEHVKVLQDIKVVDG 80
+ C R + +++ + E+ ++L GT + N E GG ++++ V +
Sbjct: 25 EFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQHGQNDEKGGERFKYISVPCALAAPTV 84
Query: 81 HLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPL-K 134
++ L H+ P G DFL+ + V D ++++ ++ + LITDA + +
Sbjct: 85 EFLEPLAHITPPPPPCGRHEVDFLETLFV-CDHVLRERTANKCYQRVVYLITDAHTDVAR 143
Query: 135 DPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII------ENDNLLNIFS 188
D+ T + + +V G+ V + E + + +N+ +L++
Sbjct: 144 KDDMNTLLESFQQLGVSLVVIGIDFTETSVDTTDDEERDDKSLTDLPLKAQNERVLHVMC 203
Query: 189 KKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT 246
+++ V +L+ + + R I+P + R L + + +++ ++ K EE+ PT
Sbjct: 204 SLLGEESMVVSLEEALQEVQELRRRKITPRALVRVVLSIGD-VRLATQMFTKAQEERLPT 262
Query: 247 LKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 306
+K+ + EV + ++ + + + E +KGY YG +VP + + A
Sbjct: 263 MKRMTANG--------EEVYMKIIFQDFSEDATPLRKEDLLKGYHYGRSLVPCAGEDVGA 314
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
+K K +++ +GF + + + V + + + A ++ RA+ N+ I
Sbjct: 315 MKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPLADDMVGAKAFRSIVRAIAAANRAMI 374
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 426
VR V R ++G+ P+ +E+ D +F+ LP+AEDVR F+F + + +
Sbjct: 375 VRFV-RTRDADPILGLCVPSTNEQ---RDVLFFSPLPYAEDVRFFEFSDYKGMWGTDSAD 430
Query: 427 EQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELK-----------SEHQ 475
+ +EA L+ + + +L+P T NP ++++Y L K +
Sbjct: 431 DDGEEA--RLLAAIVEDMTVDKLVLRPRETFNPVIQQYYATLRAKLRLFCDGREGVGGKE 488
Query: 476 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN----------PKLKKSTRR 525
L + +L AI+A F + N KL+ R
Sbjct: 489 SCGAGELRREKHGDKNTNGEVLLPLVGAIEATSAAFGVPGNQLEPVLSSVREKLEACARS 548
Query: 526 FL----REKPSG---------SDEPNGDGSVSDA--QAVNSMESKPVVT-VDKIGDLTPI 569
F+ RE S + D SDA +A +++ + ++ +I + P+
Sbjct: 549 FVYVSNRENCVADERQSYRFHSPAASHDVVASDASTRAPSTVATPCFISGASQITTVDPV 608
Query: 570 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVY 629
F+A++ R+ V A++++ + +F LL S Y K E ++ LR+ C+ E
Sbjct: 609 YSFKAIVQAREGVK-VRLAMDELGDIVFKLLRCSLGDAQYAKCTECVLVLRQHCVKEGEA 667
Query: 630 LSVSFFLLWFAFA--------FWDNSCL 649
+ FLL FW N L
Sbjct: 668 AYFNDFLLKLMLMARELDHDLFWKNGIL 695
>gi|119194859|ref|XP_001248033.1| hypothetical protein CIMG_01804 [Coccidioides immitis RS]
gi|121927188|sp|Q1E6K9.1|KU80_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 731
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 143/636 (22%), Positives = 258/636 (40%), Gaps = 74/636 (11%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 49 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +I++ +DM+++ Y + K K+ + L+TD + + + ++ ++V G
Sbjct: 109 DAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + E +N+++L I + + + + + + +
Sbjct: 168 VDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIKVVRGI 225
Query: 217 TIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVD 268
FRGDL L S + I+V Y +T + P + S P A V +
Sbjct: 226 PSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAESSVTLQ 285
Query: 269 YEYKSVEDPS-------------------------KVVPPEQRIKGYRYGPQVVPISSAE 303
+VE + K V + KGY YG V IS ++
Sbjct: 286 NGDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVHISESD 345
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+ E+
Sbjct: 346 EVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHALFELEY 405
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-PVS 422
AI R V + G+ ++V +L P + + LPFAED R ++FP K VS
Sbjct: 406 YAIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDKIVTVS 461
Query: 423 WQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLEL 470
+ P++ E V+ +DL+ + + L E +P + R +
Sbjct: 462 GKVVKEHRNLPSDDLLETMGKYVEDMDLSEFDENGDPFQSLALEDCYSPLVHRIDQAIRW 521
Query: 471 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DAFCGQFVIKENPKLKKSTRRFLRE 529
++ H PP+ L+K++ L+ +S ++ D V K PK K RR +
Sbjct: 522 RAVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDLISISAVKKVPPKAKGRKRRREAD 581
Query: 530 KP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
KP SG N D + + + KI PI +F+ ++ + + A
Sbjct: 582 KPLSGL---NVDDLLRGEKRL------------KISPENPIPEFKQTLANTEDISAISDA 626
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ M I + S INY +A+E + +R+ I
Sbjct: 627 VKQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELI 662
>gi|62896765|dbj|BAD96323.1| ATP-dependent DNA helicase II variant [Homo sapiens]
Length = 732
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 185/413 (44%), Gaps = 27/413 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 541
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 574
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCI 624
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAI 647
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD 128
+ + G+ ++ K+H+ + TD
Sbjct: 118 IQHETIGKKFE-KRHIEVFTD 137
>gi|322702143|gb|EFY93891.1| Ku70/Ku80 domain & Ku-core domain containing protein [Metarhizium
acridum CQMa 102]
Length = 646
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 209/488 (42%), Gaps = 55/488 (11%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWSMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKY 113
N+L +E GYE++ V+Q++ + +++L+ P T +GD + AIVV VD LI +
Sbjct: 64 NNKL-QEDDGYENISVIQELSQITMSGLRALQASVKPSETMSGDAVSAIVVAVD-LIDTF 121
Query: 114 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
+ K + + L+TD + + +++ ++ G+ N +P
Sbjct: 122 TKKLKWVRKIVLVTDGQGEMDADGIEDIAKKINDSGIKLTVLGVDFDNPQYGFKEEDKPP 181
Query: 174 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------ 227
+ E K ++ L R + + P + G L L +
Sbjct: 182 TKAASEKTLKALTDQCKGGIFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPA 240
Query: 228 KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 273
M I V Y KT E+ + + D A +F+ VK YK
Sbjct: 241 AMNINVERYFKTHLARPLTASTVVVKSEQATQSTQTVEDDAMDGIEFSA--VKQARTYK- 297
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V DP + V E KGY YG V IS +E K + EKS ++GF S
Sbjct: 298 VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWSKYEP 357
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M +V + A + ++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P +
Sbjct: 358 FLNMGEVCVTHARKNDIKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLE 416
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 439
+ + Y LPFAEDVR +QFP + VS Q P+++ EA + V
Sbjct: 417 LGL---ECLYDIPLPFAEDVRTYQFPPLDRVITVSGQTLKKHRLLPSDELAEAMSDYVDA 473
Query: 440 LDLAPSGK 447
+DLA G+
Sbjct: 474 MDLATYGQ 481
>gi|401709869|dbj|BAM36546.1| ku80 protein [Aspergillus aculeatus]
Length = 726
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 143/642 (22%), Positives = 268/642 (41%), Gaps = 96/642 (14%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K +GVI T++T N+L + + ++ V IK ++ L K +P T GD
Sbjct: 49 KTAGIGVIGLRTDDTSNDLEDD-ADFANISVFSGIKQFLMPDIRELSEKIVPSKTNKGDA 107
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ AIV+ + M+I + + K K+ + L+TD P+ D +S I +++ +
Sbjct: 108 ISAIVLAIQMIII-HCKKLKYKRRIVLVTDGKGPMN-------TDSLSEITKKIKEDNIE 159
Query: 159 MKNIVVRASLSGEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
+ ++ +P V EN+ +L ++ ++ + +
Sbjct: 160 L---IILGPDFDDPDYGVKEEDKDPQKAENEAILRSLAEDCDGAYGTLEQAVAELQIPRV 216
Query: 211 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPS----- 256
+ + F+G L+L ++I V Y +T K P+ ++ SD A S
Sbjct: 217 KSVRVTATFKGFLQLGNPEEYDTALRIPVERYFRTHAAKPPSASQFVLRSDLAASQEQPE 276
Query: 257 --------------TDKFATHEVKVDYEYKSVEDPSKVVPPEQR-------IKGYRYGPQ 295
TD + V+ ++ + P + P +R KGY YG
Sbjct: 277 SSATAAAAAQESQPTDGNSLTNVR---NLRAYQVPDEEAPGGKRDVELGDLAKGYEYGRT 333
Query: 296 VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALA 355
V IS + + +++LLGF + R+ ++ N+ IA+ N +A +A+S+
Sbjct: 334 AVHISETDLNITTLETFAALELLGFIQSDRYDRYMHLSTTNIIIAQRANDKAALALSSFI 393
Query: 356 RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQF 413
A+ E+ A+ R V ++ + +VV +L P++ PD LPFAEDVR ++F
Sbjct: 394 HALFELECYAVARLVVKENKPPLVV-LLAPSIE-----PDYECLLEAQLPFAEDVRTYRF 447
Query: 414 PSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPA 460
P K VS + PNE +A + V ++L + + + L E + +P
Sbjct: 448 PPLDKVLTVSGKVVTQHRNLPNEDLMDAMEKYVLGMELNDTDENGDPVDTLPIEDSFSPV 507
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKL 519
L R + ++ H + PP ++L K + P L+ +SQ ++ +K+ PK
Sbjct: 508 LHRTDAAIRFRAIHPNKPIPPPSETLTKFSNPPQDLVEKSQPQLEKLIAVAGVKKVPPKA 567
Query: 520 KKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRR 579
K R EKP S D A+ E + KI I +F+ +++
Sbjct: 568 KGRKRTRETEKPL---------SGLDVDALLHQEKRA-----KISPNNAIPEFKQTVAQA 613
Query: 580 DCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
+ + + +A++ M + + +S NY + E + +R+
Sbjct: 614 ENIETIKEAVKQMSAILEDQIRHSLGDANYDRVTEGMGTMRE 655
>gi|157872149|ref|XP_001684623.1| putative KU80 protein [Leishmania major strain Friedlin]
gi|68127693|emb|CAJ05844.1| putative KU80 protein [Leishmania major strain Friedlin]
Length = 798
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 218/511 (42%), Gaps = 71/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
++ A++L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L ++
Sbjct: 2 SKGAVVLVLDITLPRAAALVEACNLCDRILTDKMIYAPSDEVSVILAGTEKSRSALYEQS 61
Query: 64 --GGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
Y H+ V ++ + + LP+G A DF+DA+ V V
Sbjct: 62 VQARYNHITVAAELGPATSLTLAPIAATRAGVAVLPEGETVRPSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTI---ARQMVAF---GLRM 159
+L + T + K + C+ +TDA +V KED +S I R VA G
Sbjct: 122 VLQAR---TSQKKYNRCIYFLTDA-----RHEVRHKEDLLSLIDILQRDQVALVVIGFDF 173
Query: 160 KNIVVRASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STT 202
+ + A GE + + +N+ +L + + V ++
Sbjct: 174 QALPAPADSQGEFNESTTVVPSAWAALDRKAQNERILAALCTELGPPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + D
Sbjct: 234 SLLRCRRIRQQPVLKVALRMGDVRLATQL------FTLTQEERLPSLRRSTQD--GVDVA 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E V VE+ + E+R++ + G + S A+ EA++ K ++++ +GF
Sbjct: 286 QTIEYVV---LGGVEERPCALAKEERVEAFFLGVDRISCSEADREAMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAAQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALERFYHHLELK 471
+ S +L P T NP L+++Y L K
Sbjct: 458 SVDDS----VLAPHDTFNPVLQQYYATLRAK 484
>gi|62988844|gb|AAY24231.1| unknown [Homo sapiens]
Length = 568
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 185/413 (44%), Gaps = 27/413 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 87 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 142
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 143 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 202
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 203 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 258
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 259 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 317
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 318 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 377
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 574
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 378 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 436
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCI 624
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I
Sbjct: 437 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAI 483
>gi|402889331|ref|XP_003919748.1| PREDICTED: LOW QUALITY PROTEIN: X-ray repair cross-complementing
protein 5 [Papio anubis]
Length = 618
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 185/413 (44%), Gaps = 27/413 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 137 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 192
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 193 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 252
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 253 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 308
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 309 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 367
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 368 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 427
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 574
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 428 AKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 486
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCI 624
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I
Sbjct: 487 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSMDCIRAFREEAI 533
>gi|171686704|ref|XP_001908293.1| hypothetical protein [Podospora anserina S mat+]
gi|170943313|emb|CAP68966.1| unnamed protein product [Podospora anserina S mat+]
Length = 731
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 147/644 (22%), Positives = 270/644 (41%), Gaps = 97/644 (15%)
Query: 41 KNHEVGVILFGTEETENELTKE--VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAG 96
K +G + F T+ETENEL + + GY+++ VLQ I + ++ L+ P +
Sbjct: 49 KTWTIGFVGFNTDETENELADKDKLEGYDNISVLQPIGPMSMTELRELRSKVQPSRSYGA 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + A VV + ML +KY +K K+ + L+T+ + D ++ D ++ + +
Sbjct: 109 DPVSAAVVALKML-EKYNPKHKIKRRVILVTNGESNIDDEEL----DHIAAVFNE----- 158
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR-------- 208
+++ IV+ + E D N + + + + L + G
Sbjct: 159 FKVELIVIGIDFDDADYG--FKEEDKSTNKKNNEKALQQLVEKCNDGVFGTMQQAVDELS 216
Query: 209 --KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTL------------- 247
+ + + P + G L L + + V Y KT P+
Sbjct: 217 IPRIKPVRPFKAYDGPLTLGDPDKYPSAISFHVERYYKTKRASAPSASTVVVSNNNGFSQ 276
Query: 248 -KKYSDKAPSTDKFATH--EVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPI 299
+ Y D+ ++ VK YK V DP + V E+ KGY+YG VVP
Sbjct: 277 SQTYKDEDGDSEMGGAEFSGVKQMRTYK-VNDPDAPGGKRDVDFEELAKGYQYGRTVVPF 335
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
++ K+ +KS ++GF + M + L + + N A + +SA A+
Sbjct: 336 GESDLSITKYSTKKSFTIIGFVPFDSYNPFINMGETGLIVPQKMNEEAELGLSAFIHALY 395
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSF 416
E + A+ R V + + +V + +L PN + D F Y LPFAED+R +QFP
Sbjct: 396 EADSYAVARYVQKD-EAAVQILLLKPNTG----LEDEFECLYDVPLPFAEDIRSYQFPPL 450
Query: 417 SK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPAL 461
K VS + PN+ ++A + V +DL+ E +P + P NP +
Sbjct: 451 DKVLTVSGRVLKEHRLLPNDDLKDAVSDFVDAMDLSKYDVDEDGKPVDYAPVDEVYNPII 510
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
R + ++ D + L + ++P LL +++ I +K+ P +K
Sbjct: 511 HRMNQAIRARAVDPDLPIGQPAEILLRYSKPPKKLLEKAKHEIGNLIDAAELKKVP--EK 568
Query: 522 STRRFLRE---KP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMS 577
+ RF ++ KP SG D + G A++S + P +F+ M++
Sbjct: 569 AKGRFGKKDAVKPLSGLDIDSLLGGQPKRAAISSENAIP--------------EFKQMLA 614
Query: 578 RRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRK 621
+ + ++KA++ M + L+++S + Y +A E L +R+
Sbjct: 615 AAEDDETIEKAVKQMGEIVRKLIKDSFADVFYSRAAENLGVMRE 658
>gi|427791695|gb|JAA61299.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 573
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 198/467 (42%), Gaps = 81/467 (17%)
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T + +LE+ + I + Y K E K K+ K P T V+ D Y ++
Sbjct: 105 TPWNANLEIGPDISIPISSYIKVVEVKPKPWKQCVAKRP------TVPVRCDTVYYRNDE 158
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
V + I YRYG +VP + A E K + +++LGFTD +NI RHYYM
Sbjct: 159 KESEVEKDGTIPAYRYGSTLVPFTDENRAAMEGSKAGSGRGLQVLGFTDEANIKRHYYMG 218
Query: 334 D-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
D + +A G+ A A+SAL +A+++ VAIVR + + + +G L+P + E+
Sbjct: 219 DKTSYVVARKGDESAGAALSALIQALRKSKMVAIVRYSF-SDKSAPRMGFLSPRIKERY- 276
Query: 393 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---- 444
+ F LP+ ED+R F F P+ P + Q D+L+ +DL
Sbjct: 277 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNIPTDTQLSLFDDLIAAMDLTAVDID 329
Query: 445 SGKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPP---LDDSLKKITEPDPTLLAE- 499
E+ + T NP L+R Y ++ ++ H +D PP + D++K P ++E
Sbjct: 330 GEPEELFKSSQTSNPYLQRLYQCIQHRAMHPKDPLPPTPQYIADAIKT-----PKAVSEL 384
Query: 500 SQSAIDAFCGQFVIKENPKLKKSTRRFL------REKPSGSDEP---------------- 537
++ + F ++E +K + ++ S SDEP
Sbjct: 385 AEPVLKKIAAAFPLEEVSPVKAPQDNGVGPSDQNKDHVSNSDEPACKRARTDVXEEVSPV 444
Query: 538 -----NGDG---------SVSDAQAVN------SMESKPVVTVDKIGDLTPIQDFEAMMS 577
NG G S SD A SM K+ + P++DF+ ++S
Sbjct: 445 KAPQDNGVGPSDQNKDHVSNSDEPASKRARTDVSMAELVATATTKVDVVNPVEDFKKLVS 504
Query: 578 RRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+D + E ++ I L +++ + KAV+ L A R+ +
Sbjct: 505 GKD--HSYSEVCEQLEEVILKLFKDALGRAAHGKAVQCLRAYRESAL 549
>gi|255942515|ref|XP_002562026.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586759|emb|CAP94406.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 718
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 138/614 (22%), Positives = 250/614 (40%), Gaps = 67/614 (10%)
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVG 105
++FGT T N+L +E + ++ +L + V ++ L+ P T GD + +IV+
Sbjct: 70 LMFGTG-TINDLEEE--SFSNISILFGLGQVLMPDIRKLRETIKPSNTNRGDAISSIVIA 126
Query: 106 VDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ M+I Y + K K+ + L+T+ + D D + I +M + + +V+
Sbjct: 127 MQMIID-YTKKNKYKRKIILVTNGTGVMSD-------DNIEGIIEKMKEVNIEL--VVMY 176
Query: 166 ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL 225
+ E EN+ L ++ ++ S + + + F+G+L L
Sbjct: 177 YGVKEEDKDSRKAENETFLRSLAEDCEGAYGTLEQAVSELDIPRIKVTKSMPSFKGNLTL 236
Query: 226 SE------KMKIKVWVYKKTGEEKFPTLKKY--------SDKAP-----STDKFATHEVK 266
M I V Y +T K + + +AP D A+
Sbjct: 237 GNPEEYDTAMTIPVERYFRTYVAKPISASSFVPRSGTEPGSQAPVKGDAEGDALASVRTS 296
Query: 267 VDYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
Y+ P + E+ KGY YG VPI + + + L+GF
Sbjct: 297 RTYQITDESAPGGKIDVERDDLAKGYEYGRTAVPIEQTDENVANLQTFAGMGLIGFVQKD 356
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
R+ +M + N+ I + N A++A+S+L A+ E+ A+ R V ++ + ++V +L
Sbjct: 357 QYDRYMHMSNTNIIIPQRANDYASLALSSLIHALYELESYAVARLVTKESKPPMLV-LLA 415
Query: 385 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADN 435
P++ + LPFAEDVR ++FP K VS + P+ ++A N
Sbjct: 416 PSIEADY---ECLIEVQLPFAEDVRSYRFPPLDKIITVSGKVVTEHRNLPSVALKDAMSN 472
Query: 436 LVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP--PPLDDS--LKKITE 491
V +D + +L + + H +E ++ P P LD S L +
Sbjct: 473 YVDSMDFVTTNDEGQATDDLPIDESFSPLLHRIESAVRYRAVHPNDPVLDPSERLTEFAH 532
Query: 492 PDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN 550
P ++ S+S ++ +K+ PK K R+ EKP S D A+
Sbjct: 533 PSEDMVKNSKSHLEKLMSIADVKKVPPKTKGRKRQRETEKPL---------SGLDVDALL 583
Query: 551 SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 610
S+E K KI I +F+ +SR + D + A++ M I + +S NY
Sbjct: 584 SLEPKRT----KISTENAIPEFKQTLSRAENIDAIHDAVQQMAKIIESQITHSLGHSNYD 639
Query: 611 KAVELLVALRKGCI 624
+ +E L +R+ +
Sbjct: 640 RVIEGLGTMREELV 653
>gi|453088076|gb|EMF16117.1| Ku family DNA helicase [Mycosphaerella populorum SO2202]
Length = 728
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 144/636 (22%), Positives = 270/636 (42%), Gaps = 85/636 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK---HLPQGTCAGDFLDA 101
GVI T+E+ NE + Y +V VL DI V V+ L+ H+ + T GD +DA
Sbjct: 54 AGVIGLRTDESNNEWADD-DNYRNVSVLHDISQVLMPDVRRLRDKLHVSR-TTKGDAIDA 111
Query: 102 IVVGVDMLIKKYGETYKGKKH---LCLITDALCPLKDPDVGTKE-DQVSTIARQMVAFGL 157
+V+ V +K ET K ++ + LITD G E D + I +++V G+
Sbjct: 112 LVIAV----QKLHETCKKLQYVRTIILITDGR--------GRMEIDMLPEIKKKIVEDGI 159
Query: 158 RMKNIVVRASLSGEPHMR------VIIENDNLLNIFSKKSSAK-TLFVDSTTSLRGARKT 210
+ + V H + + EN+ LL + + + + L+ R
Sbjct: 160 HLIVLGVDFDDPDYHHFKEEDKDPIKAENEVLLRTLCEDCNGTFGTMLQAHDELQMPR-I 218
Query: 211 RDISPVTIFRGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFAT 262
+ + P +RG L L + I V Y K + P+ + S+ F
Sbjct: 219 KSVRPTAGYRGFLTLGNPELYDDAFTISVERYPKIMKATVPSSSAFVVRHGGASSQNFTQ 278
Query: 263 HE----------------VKVDYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSA 302
+ V++ Y+ ++ + K V ++ +GY YG V IS +
Sbjct: 279 PQNDDSNNNNNNTNSLSAVRMARTYQVHDENAPGGKKDVGRDELAQGYEYGRTAVHISES 338
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ F+ + ++GF + ++ + + +++ + +A++A+S+L RA+ E++
Sbjct: 339 DRNVTAFETLPGLDVVGFVHKDHYRQYLDLSRAYMTVSKKADEKASMALSSLIRALYELD 398
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 421
AI R V ++ ++ +L PN+ + Y LPFAEDVR ++FP + V
Sbjct: 399 SYAIARFVAKENSNPKLL-LLVPNIEPDF---ECLYDVELPFAEDVRNYKFPPLDRVLTV 454
Query: 422 SWQ--------PNEQQQEAADNLVKMLDLA---PSGKGEILQP---ELTPNPALERFYHH 467
S + PN+ A + V +DL+ + +GE ++ + T P L R H
Sbjct: 455 SGKSLKVHRHLPNDDLMSAMSDYVDAMDLSHATTNDEGESIEYGALDDTYAPKLHRLQHV 514
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 527
+ ++ +A PP + K + P L +++ A++ +K+ P K +R+
Sbjct: 515 IRHRAIFPEADPPEARPIIHKYSHPPEDLAEKAKPALERVIKAGEVKKVPP-KARGKRWN 573
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 587
R++ S +SD + P +I I +F+ M+ D + ++
Sbjct: 574 RKETS--------KPLSDLDVAALLAHDPARKGKRIDPKNAIPEFKQMVEAADGLEQIED 625
Query: 588 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGC 623
A + +K IF +++S G Y A+E + +R+ C
Sbjct: 626 ACKQLKFVIFDWIKHSVGGSAYGSAIEGVRVMRETC 661
>gi|406860029|gb|EKD13090.1| putative ATP-dependent DNA helicase II subunit 2 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 774
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 231/570 (40%), Gaps = 101/570 (17%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDF 98
K VGV+ F T+ETEN L+ + GY+++ VL+ + +D + L K + GT AGD
Sbjct: 48 KTLSVGVVGFRTDETENPLSND-DGYDNITVLKQLGEMDMPSYEELRPKLVSSGTDAGDA 106
Query: 99 LDAIVVGVDMLIK----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
+ AIVV ++ + K G K + + L+TD ++D ++ Q+ + ++V
Sbjct: 107 ISAIVVAAQLIDEGTRLKSGGQAKFVRKIVLVTDGQGRIEDDNIEPIAQQLDELNIRLVV 166
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL-----FVDSTTSLRGARK 209
G+ + E V +N+ LL ++ VDS T
Sbjct: 167 LGVDFDD--AEYGFKEEDKSSVKRDNEKLLRKLTESCRDGDFGTMAEAVDSLT----IPA 220
Query: 210 TRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY-----------S 251
+ + P + G L L + +K I V Y KT P+ +
Sbjct: 221 IKVVRPFKAYGGRLGLGDYVKYPESALFIDVERYSKTKRATAPSASNFVVSRAAAINGDG 280
Query: 252 DKAPSTDKFATHEVKVDYEY--KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
D + A + + DY +S +V + KGY YG VP +F
Sbjct: 281 DTEMTDAPLAAVKNRRDYHVFDESASQGKAIVDRTELAKGYYYGSTAVPFGEDAEAETRF 340
Query: 310 KPEKSVKLLGF-----------TDASNILRHYYMKDVNL-----FIAEPGNSRATVAVSA 353
K ++S ++GF + A+ ++ Y + +N+ IAEP N +A +A+S+
Sbjct: 341 KSKESFSIIGFIPNDKVFRRDKSHATQLMPSQYERFLNMGEACVTIAEPTNDKARMAMSS 400
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVR 409
L A+ E A+ R V + G V++ ++ P ++ +++P LPFAEDVR
Sbjct: 401 LVHALDETESYAVARLVKKDGAGPVIL-LMAPLIDLDIECLVDVP-------LPFAEDVR 452
Query: 410 EFQFPSFSK---------FPVSWQPNEQQQEA---------------ADNLVKML----- 440
++FP K + P + + +A A ++V+ L
Sbjct: 453 NYKFPPLDKVMGISGNVIMKHRYLPADNEVQAMSDYVLCLSCLARVRAKSMVRQLTSSGM 512
Query: 441 DLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
DL+ G+ E +P E P P + R H + ++ D P + L K + P
Sbjct: 513 DLSSFGRDEEGKPKEYMPIEEMYAPMVHRLQHAISYRAMQPDKPVPKPAEILLKWSHPPS 572
Query: 495 TLLAESQSAIDAFCGQFVIKENPKLKKSTR 524
L+ ++ ++A + + P K R
Sbjct: 573 DLVTKASPQLEALKKAVKVSKVPPKTKGKR 602
>gi|327308720|ref|XP_003239051.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
gi|326459307|gb|EGD84760.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
Length = 737
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 275/646 (42%), Gaps = 86/646 (13%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDI---KVVDGHLVQSLKHLPQGTCA 95
K +GV+ T+ T +++ + Y+++ + ++I ++ D +QSL P T
Sbjct: 49 KTATIGVVGLRTDGTSSDMWTKSKDNSYKNISIFKEIGQARMPDLRELQSLIK-PSNTDN 107
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
GD + +I++ +DM I KY + + K+ + L+T+ P+ + T +++ ++V
Sbjct: 108 GDAISSIILAIDM-IAKYCKKLRYKRQIVLVTNGKGPMDLDGMDTIAEKIREEGIELVIL 166
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G+ ++ + E +EN++ L ++ S + + +
Sbjct: 167 GVDFDDL--EFGVKEEDKDAAKVENESSLQGLCDVCDGVYGTLEQAISELDTPRVKVVRG 224
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFP------------TLKKYSDKAPST 257
+ F+GD +L + + I+V Y +T + P +++ D + +
Sbjct: 225 IPSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEIQETGDSSANL 284
Query: 258 DKFATHEVK-VDYEYKSVEDP-------SKVVPPEQRI------KGYRYGPQVVPISSAE 303
T K E SV + S VV ++ + KGY YG V I+ ++
Sbjct: 285 KNARTDTRKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITESD 344
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
K + + +++++GF + R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 345 ENITKLETKAALEIVGFIPIEHYDRYMNMSNSNVIIAQRTNNKAIIALSSIIHALHEVES 404
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPV 421
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 405 YAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTT 458
Query: 422 SWQ---------PNEQQQEAADNLVKMLDLAPSGK--GEILQPELTP--NPALERFYHHL 468
PNE A + V+ ++L G+ G++ L +P L R +
Sbjct: 459 MSGKVVKEHRNLPNENLLAAMEKYVENMELVQLGEEGGQVESFALQDCYSPLLHRVDQAI 518
Query: 469 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN----------PK 518
++ H PP+ L+K + L+ +S+SA++ +K+ PK
Sbjct: 519 RWRAIHPTKPLPPIPKVLQKQSRQPDELMEQSKSALEQLIKTSDVKKGKLNPQHPKIPPK 578
Query: 519 LKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSR 578
+K R + +KP S D A+ E + +I I +F+ ++
Sbjct: 579 VKGRKRNRITDKPL---------SGLDVDALLQGEKR-----QRISPENAIPEFKQALAN 624
Query: 579 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
D + V +A++ M I +++S NY + VE + +R I
Sbjct: 625 TDDINTVKEAVKQMCAIIENQIKHSLGDANYDRVVEYIGTMRDELI 670
>gi|340727268|ref|XP_003401969.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Bombus
terrestris]
Length = 560
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 221/510 (43%), Gaps = 66/510 (12%)
Query: 5 REALLLLLDV---SPSM---HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+LL+++ +P++ HS+L + + R IQK + N +V ++L G+ T+N
Sbjct: 7 KESLVLLINIGVTNPNIENNHSLLEKAKHIAKRKIQKMIFLTPNDKVAIMLMGSGVTKNR 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
L EHV+ D ++ LV+ L ++++A+ V L K
Sbjct: 67 L-----DTEHVEEFTDFQIPKWDLVKKCMALEGTNHCSNWIEALEAAV--LFMKENTILP 119
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----RASLSGEPHM 174
+ + L++D +DPD+ +S +A L I++ +++S P +
Sbjct: 120 STRKIILMSDF---NEDPDI------ISQFQADAIADCLSTNKIILVTLSESTISPTPTL 170
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVW 234
+ LL ++K + + D+ S P + LEL +K KI V
Sbjct: 171 SEV-----LLKDVNEKINGHHITFDNAISDMKFYTPIPSKPSPSYYS-LELLDK-KIPVV 223
Query: 235 VYKKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 292
Y K + FP KK K S K+ + +V Y +++ KGY+Y
Sbjct: 224 SYGKVRKTNFPPWKKAKGDQKLRSETKYLDRQ-RVSYTADNIQ------------KGYKY 270
Query: 293 GPQVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVA 350
G + + E + E+S ++ GFTD +N+ L ++Y ++ + +
Sbjct: 271 GGDFISVPEDLEMNIRQKDSERSYRIYGFTDRNNVDLEYFYKSSSSVILPNSQTNNVVKP 330
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAED 407
+L +AM E N VAIVR ++++G +V + I+IPD + + L FAED
Sbjct: 331 FYSLVQAMHETNSVAIVRKIFKKGGVPRMVALFPC-----IDIPDEPWCLIEIQLVFAED 385
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPAL 461
R + S Q N Q EA D+L+ L L + E P PNP +
Sbjct: 386 RRIMETRSMKS--TIKQLNTPQNEAIDSLIDSLMLTDTENDSQIDGCECFLPGCMPNPGV 443
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
+ + L ++ + D PP+++ LK+I E
Sbjct: 444 QHRWDMLSYRAINPDKPLPPVENYLKEIFE 473
>gi|67969531|dbj|BAE01114.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 185/413 (44%), Gaps = 27/413 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 137 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 192
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G RYG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 193 KEDIIQGSRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 252
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+++++ VAIVR + + + + VGV P++ + +
Sbjct: 253 ARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 308
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 309 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 367
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 368 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 427
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 574
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 428 AKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 486
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCI 624
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I
Sbjct: 487 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSMDCIRAFREEAI 533
>gi|384248239|gb|EIE21724.1| hypothetical protein COCSUDRAFT_83513 [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
YS+K+ + D A+H+V + EYK DP VP E+R K Y+YG Q VP+ + + + +
Sbjct: 2 YSEKSRAAD--ASHDVLREQEYKDASDPDATVPAEERAKAYKYGKQYVPVQAEDEAYLAY 59
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 363
+P++ + L+GF DA ++ + Y+MKD + +AE GN R+ +A+SAL RAM N+
Sbjct: 60 RPDRGISLMGFLDAESVPQQYHMKDPWVMVAEKGNERSGLAMSALVRAMANKNQ 113
>gi|67536764|ref|XP_662156.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|74595831|sp|Q5B4H8.1|KU80_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|40741705|gb|EAA60895.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|259482618|tpe|CBF77271.1| TPA: ATP-dependent DNA helicase II subunit 2 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku80)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B4H8] [Aspergillus
nidulans FGSC A4]
Length = 725
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 152/696 (21%), Positives = 289/696 (41%), Gaps = 114/696 (16%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE---KLCSRLIQKKLIYG-KNHEVGVILFGTEET 55
+EA + ++DV SM L D+E K I + G K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGERRNGRDLTDLEWAMKYVWDCITNTVATGRKTAMLGVIGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDFLDAIVVGVDMLI 110
+NEL E + H+ VL +IK L+ ++ L P GD + A+++ + M+I
Sbjct: 64 DNELGDE-SHFSHISVLSEIK---QFLMSDIRELGERIKPSSVDKGDAISALILAIQMII 119
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQMVA----------F 155
+ + K K+ + LIT+ L + ++ KED + I + +
Sbjct: 120 T-HCKKLKWKRKIVLITNGLGRMNSENLDDIVSKVKEDNIELIILDLTGRRGPDFDDAEY 178
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
G++ ++ +PH N+ LL +++ ++ + + + P
Sbjct: 179 GIKEED--------KDPHK---ASNETLLRTITERCDGVFGTLEQAVEETEIPRVKPVRP 227
Query: 216 VTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTD----KFAT 262
V F+G L+L ++I V Y +T K PT ++ SD A + A
Sbjct: 228 VASFKGFLQLGNPEEYDTAVRIPVERYPRTMVAKPPTASQFVLRSDLAAGQEGPVSSTAV 287
Query: 263 HEVKVD-------------YEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAV 307
E + + Y+ P + E+ KGY YG V IS +
Sbjct: 288 PETQPEDGSNLTNVRNLRTYQVSDESAPGGKIDVERDDLAKGYEYGRTAVHISETDENIT 347
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+ + +++L+GF + R+ ++ + ++ IA N +A++A+S+ A+ E+ A+
Sbjct: 348 RLETTAAMELVGFIQSERYDRYMHLSNTHIIIANRANDKASLALSSFIHALFELESYAVA 407
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ 424
R V ++ + +V +L P++ PD LPFAEDVR ++FP VS +
Sbjct: 408 RLVTKENKPPTLV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDHVVTVSGK 461
Query: 425 --------PNEQQQEAADNLVKMLDLAPSGK-GEILQPELTP-------NPALERFYHHL 468
PN+ +A D V ++L + + G+++ TP +P L R +
Sbjct: 462 VVTQHRNLPNDDLLDAMDKYVDSMELKGTDEDGDLVN---TPFPIDDSFSPVLHRVNAAI 518
Query: 469 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 528
++ H + PP L + ++P LL ++ + +K+ P K +R
Sbjct: 519 RSRAIHPNDPIPPPARILTQFSQPPEHLLKNAERHLKRLIEVADVKKVPPKAKGRKR--- 575
Query: 529 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
+ EP S D ++ E + +I I +F+ +++ + + + A
Sbjct: 576 -----AREPEKPLSGLDVDSLLHQEKRV-----RISPNNAIPEFKQTLAQAENIETMKDA 625
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ M++ + + +S NY + E L +R+ I
Sbjct: 626 VKQMRSILEDQIRHSLGDANYDRVTEGLGVVREELI 661
>gi|35038|emb|CAA40736.1| nuclear factor IV [Homo sapiens]
Length = 628
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 184/413 (44%), Gaps = 27/413 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 147 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 202
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFI-A 340
E I+G+ YG +VP S + E +K+K E K +LGF +S + R ++M + L + A
Sbjct: 203 KEDIIQGFLYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 262
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 263 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 318
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 455
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 319 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 377
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 378 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 437
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 574
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 438 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 496
Query: 575 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCI 624
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I
Sbjct: 497 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAI 543
>gi|154278066|ref|XP_001539857.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413442|gb|EDN08825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 710
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 142/619 (22%), Positives = 271/619 (43%), Gaps = 121/619 (19%)
Query: 66 YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD-FLDAIVV-GVDMLIKKYGETYKGKK 121
Y ++ V QDI + ++ L+ L P T GD + A+ + G+D ++ K E +
Sbjct: 83 YANISVFQDISQILMPQIRELRELIKPSHTLEGDDGMGAMDIDGIDGIVSKINE-----E 137
Query: 122 HLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEND 181
++ L+ + DP+ G KE+ L+ KN E H++ ++E+
Sbjct: 138 NIELVILGV-DFDDPEYGFKEEDKEP---------LKAKN---------ESHLKQLVED- 177
Query: 182 NLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWV 235
IF ++ S +T+ + + F+GDL L S + I+V
Sbjct: 178 -CEGIFGT--------LEHAISEMEIPRTKVVRSMPTFKGDLRLGDPDQYSSALTIQVER 228
Query: 236 YKKT-------------------GEEKFPTLKKYSDKAPSTDKFA------------THE 264
Y +T G+E + + K PS ++ A T++
Sbjct: 229 YYRTYAARPPPASSFVSSSALSEGQETAQSSATLAAKEPSQERGAGAASLTAVRNARTYQ 288
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V + K + V ++ KGY YG V I+ ++ K + E +++ +GF +
Sbjct: 289 V----DDKGAAGGKRDVARDELAKGYEYGRTAVHITESDENITKLETEAALEFIGFIPSD 344
Query: 325 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +VV +L
Sbjct: 345 NYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVPKAGKSPLVV-LLA 403
Query: 385 PNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQP-NEQQQEAADNL---- 436
P++ PD F LPFAED+R ++FP K +S + E + +D+L
Sbjct: 404 PSIE-----PDYECFLEVQLPFAEDMRSYRFPPLDKVVTISGKTVTEHRNLPSDSLLSRM 458
Query: 437 ---VKMLDLAPSGK-GEILQPELTPN---PALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
V L+L + GE ++ L N P L R H + ++ H PP+ + L+K+
Sbjct: 459 AEYVDSLELTEKDEDGETIESMLIENSFSPLLHRIDHAIRWRAVHPSEPLPPVPEILQKL 518
Query: 490 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV 549
+ L A+S++++ +K+ P K R++ D+P +
Sbjct: 519 SRQPEDLQAQSENSLANLIATSDVKKVPPKAKG-----RKRDREIDKP-----------L 562
Query: 550 NSMESKPVVTVDKIGDLTP---IQDF-EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 605
+ + + ++ +K ++P I +F ++++S +D D V A++ M + I + +S
Sbjct: 563 SGLNVQELLQTEKRVKISPDNAIPEFKQSLVSSQDI-DAVKDAVKQMSSIIESQIRHSLG 621
Query: 606 GINYPKAVELLVALRKGCI 624
NY +A+E L +++ +
Sbjct: 622 DANYDRAIEGLGTMKEELV 640
>gi|326670851|ref|XP_002665537.2| PREDICTED: x-ray repair cross-complementing protein 5-like [Danio
rerio]
Length = 832
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 181/412 (43%), Gaps = 25/412 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 353 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 408
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 409 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 468
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 469 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 524
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG----EILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ + L + EI +
Sbjct: 525 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVEIFKVNHI 583
Query: 457 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI--- 513
PNP +R + L + + D PP+D LK++ E + A Q+ + F +
Sbjct: 584 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCQAPLRDVKTSFPLKVV 643
Query: 514 KENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 573
+ + K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 644 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 699
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
++ ++ D+A + + ++I LL N + Y K++ + A R +L
Sbjct: 700 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVL 748
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 38 IYGKNH-EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCA 95
++ +N E+G++LFGT+ T+N L + G YE++ V + + + D L++ ++ Q G
Sbjct: 150 VFAENKDEIGLVLFGTDGTKNPLAND-GQYENITVHRHLMIPDFELLEEIERELQPGGQQ 208
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
D+LDA+VV +D+L ET GKK+ L + L D ++ T EDQ+ I + +
Sbjct: 209 ADWLDALVVCMDLL---QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKA 261
Query: 156 GLRMK 160
G+ ++
Sbjct: 262 GITLQ 266
>gi|296814992|ref|XP_002847833.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238840858|gb|EEQ30520.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 721
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 128/582 (21%), Positives = 243/582 (41%), Gaps = 78/582 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + L D++ + ++ K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGEINNGRELSDLDWAMLYVWDKITTTVATGRKTATIGVIGMRTDGT 63
Query: 56 ENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA--GDFLDAIVVGVDMLIK 111
+++ + YEH+ + +DI ++ L+ L + + GD +D IV
Sbjct: 64 SSDIWSKSKDDAYEHISIFKDIGQALMPDLRELRSLIKASSTDKGDAIDLIV-------- 115
Query: 112 KYGETYKGKKHLCLITDALCPLKDPD-VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 170
KY + K K+ + L+T+ + DPD + +++ ++V G+ +
Sbjct: 116 KYCKKLKYKRKIVLVTNGKGAM-DPDGMEGIASKINEEGIELVVLGVDFDD--PEYGFKE 172
Query: 171 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 227
E V EN++ L ++ S + + + + F+GD L +
Sbjct: 173 EDKDAVKAENESSLQKLCDVCDGIYGTLEQAISELDTPRVKIVRGIPSFKGDFRLGDPEK 232
Query: 228 ---KMKIKVWVYKKTGEEKFP----------------------TLKKYSDKAPSTDKFAT 262
+ I+V Y +T + P TLK + + +++
Sbjct: 233 YDSALTIQVERYYRTYAARPPAASSFVLSGAPPEGQESGKPSVTLKNVNAEGENSNTIGL 292
Query: 263 HEVKVDYEYKSVEDP----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 318
V+ Y+ +D + V ++ KGY YG V IS ++ K + + +++++
Sbjct: 293 TSVRNARSYQVADDSVVGGKRDVERDELAKGYEYGRTAVHISESDENITKIETKAALEII 352
Query: 319 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
GF N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+
Sbjct: 353 GFIPTQNYDRYMIMSTSNVIIAQRTNNKAIMALSSVIHALFELESYAVGRLVVKDGKGPA 412
Query: 379 VVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ--------PNE 427
++ +L P++ PD LPFAED R ++FP + VS + PNE
Sbjct: 413 LI-LLAPSIE-----PDYECLLEVQLPFAEDCRCYRFPPLDRVTTVSGKAVKEHRNLPNE 466
Query: 428 QQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 483
A + V ++L G+G E E +P L R + ++ H PP+
Sbjct: 467 DLVSAMEQYVASMELVEPGEGGELVESFALEDCYSPLLHRIDQAIRWRAIHPTKPLPPVP 526
Query: 484 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
+ L+K++ TL +S+ A++ IK+ P K +R
Sbjct: 527 EILQKLSRQPETLREQSRPALEQLIKVSDIKKVPPKAKGRKR 568
>gi|133777834|gb|AAI15209.1| Xrcc5 protein [Danio rerio]
Length = 727
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 182/412 (44%), Gaps = 25/412 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESMDIFKVNHI 478
Query: 457 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI--- 513
PNP +R + L + + D PP+D LK++ E + A Q+ + F +
Sbjct: 479 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCQAPLRDVKTSFPLKVV 538
Query: 514 KENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 573
+ + K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 539 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 594
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
++ ++ D+A + + ++I LL N + Y K++ + A R +L
Sbjct: 595 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVL 643
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSMSNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + G YE++ V + + + D L++ ++ Q G D+LDA+VV +D+L
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMIPDFELLEEIERELQPGGQQADWLDALVVCMDLL-- 117
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
ET GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 118 -QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|259479030|dbj|BAI40068.1| Ku80 [Trichophyton interdigitale]
Length = 728
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 138/636 (21%), Positives = 268/636 (42%), Gaps = 75/636 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GV+ T+ T +++ TK Y+++ + ++I ++ L+ L P T G
Sbjct: 49 KTATIGVVGVRTDGTSSDMWTKSKDPSYKNISIFKEIGQALMPDLRELRSLIKPSNTDNG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +IV+ +DM I KY + K K+ + L+T+ P+ + T +++ ++V G
Sbjct: 109 DAISSIVLAIDM-IAKYCKKLKYKRKIVLVTNGKGPMDLDGMDTISEKIREEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + + E V EN++ L ++ S + + + +
Sbjct: 168 VDFDD--PEFGVKEEDKDAVKAENESSLEKLCDACDGVYGTLEQAISELDTPRVKVVRGI 225
Query: 217 TIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY-------------------S 251
F+GD +L + + I+V Y +T + P +
Sbjct: 226 PSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQQTEDSSANLK 285
Query: 252 DKAPSTDKFATHEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEW 304
+ T K ++E+ +S V D V V + KGY YG V I+ +
Sbjct: 286 NARADTGKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITDSME 345
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + + +++++GF N R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 346 NITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKAIIALSSIIHALHEVESY 405
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVS 422
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 406 AVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTM 459
Query: 423 WQ---------PNEQQQEAADNLVKMLDLA-PSGKGEILQP---ELTPNPALERFYHHLE 469
P+E A + V+ ++L P +G+ ++ + +P L R +
Sbjct: 460 SGKVVKEHRNLPDENLLAAMEKYVENMELVQPGEEGDQVESFALQDCYSPLLHRVDQAIR 519
Query: 470 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLR 528
++ H PP+ L+ + L+ +S+SA++ +K+ PK+K R
Sbjct: 520 WRATHPTKPLPPIPGILQNQSRQPEDLMEQSKSALEQLIKASDVKKVPPKVKGRKRNRTT 579
Query: 529 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 588
+KP S D A+ E + +I I +F+ ++ D + V ++
Sbjct: 580 DKPL---------SGLDVDALLQGEKR-----QRISPENAIPEFKQALASTDDINTVKES 625
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ M I +++S NY + VE L +R I
Sbjct: 626 VKQMCAIIENQIKHSLGDANYDRVVEYLGTMRDELI 661
>gi|392862723|gb|EAS36611.2| ATP-dependent DNA helicase II subunit 2 [Coccidioides immitis RS]
Length = 742
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/641 (22%), Positives = 258/641 (40%), Gaps = 79/641 (12%)
Query: 41 KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 55 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 114
Query: 97 DF-----LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
D + +I++ +DM+++ Y + K K+ + L+TD + + + ++ +
Sbjct: 115 DANTYEAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIE 173
Query: 152 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 211
+V G+ + E +N+++L I + + + + +
Sbjct: 174 LVILGVDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIK 231
Query: 212 DISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKFATH 263
+ + FRGDL L S + I+V Y +T + P + S P A
Sbjct: 232 VVRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAES 291
Query: 264 EVKVDYEYKSVEDPS-------------------------KVVPPEQRIKGYRYGPQVVP 298
V + +VE + K V + KGY YG V
Sbjct: 292 SVTLQNGDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVH 351
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
IS ++ K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+
Sbjct: 352 ISESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHAL 411
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
E+ AI R V + G+ ++V +L P + + LPFAED R ++FP K
Sbjct: 412 FELEYYAIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDK 467
Query: 419 F-PVSWQ--------PNEQQQEAADNLVKMLDLAP-SGKGEILQP---ELTPNPALERFY 465
VS + P++ E V+ +DL+ G+ Q E +P + R
Sbjct: 468 IVTVSGKVVKEHRNLPSDDLLETMGKYVEDMDLSEFDENGDPFQSLALEDCYSPLVHRID 527
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DAFCGQFVIKENPKLKKSTR 524
+ ++ H PP+ L+K++ L+ +S ++ D V K PK K R
Sbjct: 528 QAIRWRAVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDLISISAVKKVPPKAKGRKR 587
Query: 525 RFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 583
R +KP SG N D + + + KI PI +F+ ++ +
Sbjct: 588 RREADKPLSGL---NVDDLLRGEKRL------------KISPENPIPEFKQTLANTEDIS 632
Query: 584 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+ A++ M I + S INY +A+E + +R+ I
Sbjct: 633 AISDAVKQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELI 673
>gi|312371754|gb|EFR19861.1| hypothetical protein AND_21697 [Anopheles darlingi]
Length = 672
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 147/588 (25%), Positives = 252/588 (42%), Gaps = 57/588 (9%)
Query: 50 FGTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIVVGVD 107
GT+ET N++ E G GYEH+ ++K+ + H + L++ + + ++ DA++V VD
Sbjct: 1 MGTDETSNQVNTEHGSGYEHICEASELKLPNWHTSRVLENKVLRSNSEANWYDALIVAVD 60
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKED-------------QVSTIARQMVA 154
L + G + KHL + + PL P ++ + QV I+ Q+
Sbjct: 61 FL--RAGTANRSFKHLHIFL--ISPLAMPAEVSQSEIRYLLDNLEVMLCQVHIISDQIEH 116
Query: 155 FGLRMKNIVVRASLSG-----EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ + S SG E I+N+NLLN +K + G
Sbjct: 117 SNPITTSTIFTPSSSGTFVDEEVKSEDRIKNENLLNEIMQKEGFTLTNISMAHRCLGFYV 176
Query: 210 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 269
+ + P T + L + K+K + Y E+K K + ST A VK+
Sbjct: 177 PKPVRP-TPWNSTLTIGTKLKFAISAYLLISEQKGLGPFKVTSAGGST---ANSVVKMRT 232
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
++ E P + E I GY YG VVP + K E + LGFT +SNIL
Sbjct: 233 QHFQNEKPIDL-EMEDVIVGYMYGSTVVPYDNTIDMDYK-SGEAGLTCLGFTASSNILDE 290
Query: 330 YYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
Y K L +A+ G + + ++AL +AM +N V + ++R+ + + L P +
Sbjct: 291 YLSGKGTYLVMAKKGCAGSEEKLTALVKAMMALNVVMMAAKIYRKDTKP-RLQTLFPIMH 349
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
E+ P L F +++ +FPSF QP+ +Q A D L+ ++L + +
Sbjct: 350 EQ-RYP-CLVMLELVFQDEINLVRFPSF--LTSKHQPSPEQYAAIDKLIDSMNLMDAVED 405
Query: 449 ------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS-LKKITEPDPTLLAESQ 501
E T NP + Y + ++ H +AA P+ DS + ++ L+ ++
Sbjct: 406 EHGVSHEAFGFNETHNPNHQFLYRSVVHRAMHPNAASLPVVDSDISELVSIPKKLVHRAE 465
Query: 502 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDA------QAVNSMESK 555
+A+D F ++E K+ TR + + + GD + S A A++ +
Sbjct: 466 AAMDEIKQVFPLEEQ---KRITRAEWLHRMAAMHQGGGDAATSSAASAPGLDAIDEESER 522
Query: 556 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
VV +G TP +DF+ ++ R + V K M+ IF LL S
Sbjct: 523 RVVLA--VGSTTPAEDFDPLLRRGEKFVTVAK---QMQTVIFELLFTS 565
>gi|396493633|ref|XP_003844102.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
gi|312220682|emb|CBY00623.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
Length = 733
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 232/555 (41%), Gaps = 77/555 (13%)
Query: 45 VGVILFGTEETE-NELTKEVGGYEHVKVLQDIK---VVDGHLVQSLKHLPQGTCAGDFLD 100
+ VI + T++T+ + K+ GYEH+ V ++K +VD +Q K P T GD L
Sbjct: 53 MSVIGYRTDDTDLRGIVKDTQGYEHITVFSNVKQYLLVDIRNLQE-KLKPSQTDDGDLLS 111
Query: 101 AIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
A+ + V M+ G K + + ++TD D+ E I +
Sbjct: 112 ALALAVQMIDSTTRGAKGNPLKYDRKIIVVTDGRGEWDTDDL---EQITMKIKDEAAPIE 168
Query: 157 LRMKNIVVRASLSG------EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
+ + + + SG EP N+ +L F + + +
Sbjct: 169 VTVLGVDFDDAESGFKEEDKEPEK---ARNEEILRSFVEACDGNFGTLAVAIDQMHTPRL 225
Query: 211 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYS-----DKA-PSTD 258
++ P ++G L L + + I V Y T K PT ++ DKA PS +
Sbjct: 226 KETRPTPSYKGPLTLGDTANYDATITIDVERYPCTMLAKPPTASSFAVRTEDDKAGPSAE 285
Query: 259 KFATHEVKVDY--------EYKSVEDPSKVVPPEQRI--------KGYRYGPQVVPISSA 302
AT V D+ Y+ + K P+ ++ +GY YG V IS +
Sbjct: 286 SPATM-VGEDHAMTDLSAVRYQRLYQIDKPGEPDSKMTVELDELERGYEYGRTAVHISES 344
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 362
+ VK + E S++L+GF A R+ + + + + N +A +A+S+ A+ E
Sbjct: 345 DMNCVKMETEPSLQLVGFVKAEEFERYLPLSRSSFLVPQKANPQAQLALSSFIHALYEAE 404
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFP 420
AI R V ++ + V+V +L P +I + +V LPF ED+R ++FP K
Sbjct: 405 CYAIARLVTKEMKPPVMV-LLMP----RIELEWEALVDVELPFEEDMRRYKFPPLDRKLT 459
Query: 421 VSWQ--------PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYH 466
VS + P E A + V +DL+ G+ E + E T P + R H
Sbjct: 460 VSGKVITEHKDLPTEDLVNAMSDYVDAMDLSTFGRDEDGNEEEYAKIEDTYAPIVHRINH 519
Query: 467 HLELKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKK 521
+ ++ H D A P D + L K + P P L+A+ QS + +K+ P K +
Sbjct: 520 VIRWRATHPDPAQPIPDPPEILLKYSTPPPALIAQYQSTLTVLQKAADVKKVPPKVKGRG 579
Query: 522 STRRFLREKP-SGSD 535
+R R+KP SG D
Sbjct: 580 KRQRTERDKPISGLD 594
>gi|336365737|gb|EGN94086.1| hypothetical protein SERLA73DRAFT_114994 [Serpula lacrymans var.
lacrymans S7.3]
Length = 614
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S+ V EQ I+G++YG P ++ + +K + + GF A N R M +V
Sbjct: 122 SEKVEKEQLIRGFKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQY 179
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+P +++ VA+S++ +AM E + +AI R V + G +GVL P+V +KI D
Sbjct: 180 IWADPSSAQQQVALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCL 235
Query: 398 YFNVLPFAEDVREFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ +PFA+DVR++ F S K P + P + Q A +N V +DL +G
Sbjct: 236 LWVQMPFADDVRKYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAG 293
Query: 447 KGE-------ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
+ L+ NPA+ R +H + + PPP + LK EP
Sbjct: 294 DKDEEGNRYPWFDTRLSYNPAVHRTKQALFHSAVVNDLITNPIPPPHPELLKYF-EPPKK 352
Query: 496 LLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
+L ++ AI+ F +KE PK R+
Sbjct: 353 VLKRARDAIEDCKQAFKVKEVPKKVARARK 382
>gi|425768972|gb|EKV07482.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum Pd1]
gi|425770556|gb|EKV09025.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum
PHI26]
Length = 711
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 258/629 (41%), Gaps = 76/629 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDF 98
K VGV+ T+ T N+L +E + ++ +L + V ++ L+ P T GD
Sbjct: 49 KTATVGVVGLRTDGTINDLEEE--NFSNISILFGLGQVLMPDIRKLRETIKPSKTDRGDA 106
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA---- 154
+ +I++ + M+I+ Y + K K+ + L+T+ + D ++ +++ + ++V
Sbjct: 107 ISSIIIAMQMIIE-YTKKNKYKRKIVLVTNGTGAMSDDNIEGIIEKMKEVNIELVVIGAD 165
Query: 155 -----FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+G++ ++ +R + EN++LL ++ ++ S +
Sbjct: 166 FDDPEYGVKEEDKDIRKA-----------ENESLLRSLTEDCEGIYGTLEQAVSELDTPR 214
Query: 210 TRDISPVTIFRGDL------ELSEKMKIKVWVYKKTGEEKFPTLKKY--------SDKAP 255
+ + F+G+L E + I V Y +T K + Y +AP
Sbjct: 215 IKITKSMPSFKGNLMLGNPEEYDTAITIPVERYFRTYVAKPISASLYVLRSGNEAGSQAP 274
Query: 256 -----STDKFATHEVKVDYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVK 308
D + Y+ P + E+ +GY YG VPI E
Sbjct: 275 VKDTSEGDSLTSVRTSRTYQITDKSAPGGKIDVERDDLARGYEYGRTAVPIEQTEENVAN 334
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
+ + L+GF R+ +M + N+ I + N A++A+S+L A+ E+ A+ R
Sbjct: 335 LQTFAGMGLIGFVQKDQYDRYMHMSNTNIIIPQRANDNASLALSSLIHALYELESYAVAR 394
Query: 369 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--- 424
V ++ + ++V +L P+V + LPFAEDVR ++FP K VS +
Sbjct: 395 LVTKESKPPMLV-LLAPSVEAD---HECLIEVQLPFAEDVRSYRFPPLDKIITVSGKVVT 450
Query: 425 -----PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
P+ ++A + V +D + +L + + H +E ++ P
Sbjct: 451 EHRNLPSAALKDAMSDYVDSMDFVTTNDEGEPTDDLPIDESFSPLLHRIESAVRYRAVHP 510
Query: 480 --PPLDDS--LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 535
P LD S L + + ++ S+S ++ +K+ K R+ EKP
Sbjct: 511 NDPVLDPSERLTEFAQLSVDMVKNSKSHLEKLMSIADVKKGEPTKGRKRQRETEKPL--- 567
Query: 536 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 595
S D A+ S+E K KI I +F+ +SR + D + A++ M
Sbjct: 568 ------SGLDVDALLSLEPKRT----KISTENAIPEFKQTLSRAENIDAIHDAVQQMAKI 617
Query: 596 IFGLLENSNEGINYPKAVELLVALRKGCI 624
I + +S NY + +E L +R+ +
Sbjct: 618 IETQITHSLGHSNYDRVIEGLGTMREELV 646
>gi|398019168|ref|XP_003862748.1| KU80 protein, putative [Leishmania donovani]
gi|322500979|emb|CBZ36056.1| KU80 protein, putative [Leishmania donovani]
Length = 798
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 212/511 (41%), Gaps = 71/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
E Y H+ V D+ + + LP G A DF+DA+ V V
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRRSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRM 159
+L + T + + + C+ +TDA +V KED +S I +V G
Sbjct: 122 VLQVR---TSQKRYNRCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDF 173
Query: 160 K------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STT 202
+ N S + +N+ +L + + + V ++
Sbjct: 174 QALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCTELGSPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 234 SLPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVV 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 286 QTIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALERFYHHLELK 471
+ S +L P T NP L+++Y L K
Sbjct: 458 SVDDS----VLAPHDTFNPVLQQYYATLRSK 484
>gi|146093538|ref|XP_001466880.1| putative KU80 protein [Leishmania infantum JPCM5]
gi|134071244|emb|CAM69929.1| putative KU80 protein [Leishmania infantum JPCM5]
Length = 798
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 212/511 (41%), Gaps = 71/511 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVD 107
E Y H+ V D+ + + LP G A DF+DA+ V V
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRQSIAEAYDFIDALQVAVA 121
Query: 108 MLIKKYGETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRM 159
+L + T + + + C+ +TDA +V KED +S I +V G
Sbjct: 122 VLQVR---TSQKRYNRCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDF 173
Query: 160 K------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STT 202
+ N S + +N+ +L + + + V ++
Sbjct: 174 QALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCAELGSPSTLVSPAEALASL 233
Query: 203 SLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 260
SL R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 234 SLPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVV 285
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 320
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 286 QTIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGF 342
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 343 VGEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSL 401
Query: 381 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 440
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 402 CVCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGL 457
Query: 441 DLAPSGKGEILQPELTPNPALERFYHHLELK 471
+ S +L P T NP L+++Y L K
Sbjct: 458 SVDDS----VLAPHDTFNPVLQQYYATLRSK 484
>gi|409050963|gb|EKM60439.1| hypothetical protein PHACADRAFT_82428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 878
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 130/564 (23%), Positives = 225/564 (39%), Gaps = 98/564 (17%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLD 100
K + GVI+FG+ +T N + ++ GGYE+V L I + + L GD LD
Sbjct: 66 KTDQCGVIVFGSRKTNNHVNRKQGGYENVDELVPILHPTAKTIAQISELNPAEEIGDPLD 125
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
A+VVG++ + G + + L+TD P++ + + R+
Sbjct: 126 ALVVGIETQDQYLGNKKTWTRKIVLLTDGENPIE--------------IQHLEKIAQRLN 171
Query: 161 NIVVRASLSG------------EPHMRVIIEND----NLLNIFSKKSSAKTLFVDSTTSL 204
++ ++ ++ G E + EN+ L+ S
Sbjct: 172 DLKIKLTIVGVDFDDEEFGYVEEDKSDIKRENEEFYHTLVGTLDNGVVGNCTAAIEEISR 231
Query: 205 RGARKTRDISPVTIFR-GDLE--LSEKMKIKVWVYKKTGEEKFPTLKKYSD--------K 253
+++TR ++ R GD+E E ++I V + K T + + KK++ +
Sbjct: 232 PESKQTRSQPSASVLRLGDVENHPEEAIEINVKISKCTALVRPKSFKKFARIGDEDIEMQ 291
Query: 254 APSTDKFATHEV-KVDYEYKSVEDPS----------------------KVVPPEQRIKGY 290
P D T E ++ E + DPS + V E+ I+GY
Sbjct: 292 NPGDDSEPTVEYGQLTREIRYAFDPSGRRDDEEADRDAEEETEKKDDLQDVEKEELIRGY 351
Query: 291 RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 350
+YG VP+ + K + ++ +++ GF R + + +V A + VA
Sbjct: 352 KYGSSFVPVPENNFP--KLETKRGMEICGFFKDEFFRREWSIGEVRYVFAADKSPLQQVA 409
Query: 351 VSALARAM------KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--- 401
+S+L AM KE+ AI R + G + + GVL P E N + V
Sbjct: 410 LSSLVEAMFQEINGKEIMYYAITRWITTDGSEPKM-GVLQPVKDESANY--LLWVQVRAS 466
Query: 402 -LPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 449
+PFA+D+R++ FPS + + P E+Q E ++LV L+L +G+ +
Sbjct: 467 HMPFADDLRKWSFPSLDQLVNGKGQLVMTHPYLPTEEQLETMEDLVDALNLMEAGEKDED 526
Query: 450 -----ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
L+ NPA+ R H + + PP L K EP ++ ++
Sbjct: 527 GNRTPWYDTRLSYNPAIHRIKQAQFHAAIVEDLNRQPLPPPHPELLKYFEPPRRVMKRAR 586
Query: 502 SAIDAFCGQFVIKENPKLKKSTRR 525
AIDA F +KE PK R+
Sbjct: 587 PAIDAAREAFNVKEVPKTVARNRK 610
>gi|121934976|sp|Q0U8L4.1|KU80_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 715
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 157/659 (23%), Positives = 271/659 (41%), Gaps = 119/659 (18%)
Query: 41 KNHEVGVILFGTEETE-NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGD 97
K+ + VI T+ET+ + +E GYE+++V ++K +++L+ P T GD
Sbjct: 28 KSALMSVIGCRTDETDLGGVMEEAEGYENLRVFSELKQFLLGDIRTLQDQLRPSKTNDGD 87
Query: 98 FLDAIVVGVDML----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
L A+ + V M+ K G+ K + + ++TD + D+ + +
Sbjct: 88 LLSALALAVQMIDGATQGKGGKPLKYDRRIIIVTDGRGSIDTDDL------------EQI 135
Query: 154 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTL-------FVDSTTSL 204
A +R V L G ++ D+ N F + KSS K FV+ +
Sbjct: 136 AAKIRDPEAPVDLVLLG-------VDFDDPDNGFKEEDKSSQKAKNEVSLKGFVEDCNGV 188
Query: 205 RGAR----------KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLK 248
G + ++ PV F+G L L + + I V Y T K PT
Sbjct: 189 FGTLAEAIDQLQIPRLKETRPVPSFKGQLTLGDPGHYDATLTIDVERYPCTMLAKPPTAS 248
Query: 249 KYSDKA-----------------------PSTDKFATHEVKVDYEYKSVEDPS--KVVPP 283
++ + P TD A +V Y+ + E+P K V
Sbjct: 249 SFATRTDFGAGSAAGPSDESSHTMTGEEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEM 307
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
++ +GY YG V IS ++ VK + + L+GF A R+ + N + + G
Sbjct: 308 DELERGYEYGRTAVHISESDMNVVKLETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRG 367
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-L 402
N A +++S+ A+ E + A+ R V ++ + V+V +L P +I + +V L
Sbjct: 368 NQAAQLSLSSFIHALYEADCYAVARLVTKELKPPVIV-LLVP----RIEVEWEALVDVEL 422
Query: 403 PFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGK------ 447
PF ED+R ++FP K +S + P ++ +A V +DL+ G+
Sbjct: 423 PFEEDMRRYKFPPLDRKLTISGKVITEHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNP 482
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS--LKKITEPDPTLLAESQSAID 505
E +PE T +P + R H + ++ H D + P S L K P LL S S +
Sbjct: 483 AEYAKPEDTFSPIVHRIGHIIRWRATHPDPSLPMPPPSDILTKYANPPADLLDASTSQFE 542
Query: 506 AF-CGQFVIKENPKLKKSTRRFL--REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVD 561
A V K PK+K +R R+KP SG D ++++ P
Sbjct: 543 ALKKAARVSKVPPKVKGRGKRNRAERDKPISGLD-------------IDALLGNPNRVKI 589
Query: 562 KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
+L P F+ ++ D + + +A + M +I L+ +S Y +A+E L +R
Sbjct: 590 DPSNLVP--SFKNALAASDDLETIKEAAQSMSTEIRSLIRSSVGDSGYGRALEALRVMR 646
>gi|402218793|gb|EJT98868.1| SPOC domain-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 799
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 164/392 (41%), Gaps = 61/392 (15%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
V E+ +K Y+YG VP E+E K + K ++++GF S R + +V+
Sbjct: 345 VEKEELVKAYKYGATWVPCEEGEFE--KLQTTKGMEVIGFVPESKWHREQALGEVSYVYP 402
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ-SVVVGVLTPNVSEKINIPDSFYF 399
+++A + SA+ + M E + VR VWR G V V P S + D F
Sbjct: 403 SDTSAKAQIQFSAIVQVMAEKGVMMTVRYVWRDGADPKVGVCKAQPLGSVEWGGVDCLLF 462
Query: 400 NVLPFAEDVREFQFPSFSKF----------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE 449
+PFA+DVR+++F S + S P ++QQ A D+ V +DL + + E
Sbjct: 463 VQMPFADDVRKYKFNSLTDLFDKKTGERIKEHSTLPTQEQQSAMDDFVDAMDLMDATQDE 522
Query: 450 ------ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 499
P L+ NPAL R +H + ++ PPP + +K T P+ +L
Sbjct: 523 EGNTAPWFDPALSFNPALHRIKQALFHGARVADPEKNPLPPPHPELVKYFTTPE-NVLDR 581
Query: 500 SQSAIDAFCGQFVIKEN-----PKLKKSTRR---------FLREKPS---GSDEPNGD-- 540
++ AI+ IK+ PK S RR +L E G+ GD
Sbjct: 582 AKPAIERLKKAMNIKKGKFSVPPKAAVSKRRNGATADAPEYLYESVEDILGATTGTGDSN 641
Query: 541 ---------GSVSDAQAVNSMESKPVVTVDK---IGDLTPIQDFEAMMSRRDCPDWVDKA 588
G D P V + I TP++DFE ++ + D V KA
Sbjct: 642 SLLAKTSPKGKGKDTNNAQLPTPSPSVAPEPGRLISLRTPLKDFEGLL---EAGDLVSKA 698
Query: 589 IEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
+EDM LL+ + + + +E + A+R
Sbjct: 699 VEDMSAV---LLQVATDSQRSEEMLECMKAMR 727
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCS------------------RLIQKKLIY-GKNHEVGVIL 49
+ ++DVSPSM + E S R IQ+ + K E GVIL
Sbjct: 13 IFVIDVSPSMGEPMFPAEDSGSPEEGYGLTKLEWALEYVIRKIQEFIFTERKTEECGVIL 72
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFLDAIVVGVDM 108
FGT+ T N++ E GYE++ L + ++ L+ + P+GT A + LDA++V +
Sbjct: 73 FGTDTTNNKVNDEHDGYENIVELVPLSAPTTKIIDMLRTVKPEGTIA-EPLDALIVAIQT 131
Query: 109 LIKKYGETYKGKKHLCLIT--DALCPLKDPD 137
G K+ + L+T + C D D
Sbjct: 132 QSLHLGNKKAWKRRITLVTYGETECNFDDWD 162
>gi|401425391|ref|XP_003877180.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493425|emb|CBZ28712.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 798
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 211/506 (41%), Gaps = 67/506 (13%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK--EVG 64
A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L + E
Sbjct: 5 ATVLVLDITLPSAAALVEACDLCDRILTDKMIYAPSDEVAVILAGTEKSRSALYERSEQA 64
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKH-------LPQGTC-------AGDFLDAIVVGVDMLI 110
Y+H+ V ++ + + LP+G A DF+DA+ V V +L
Sbjct: 65 RYKHITVAAELGPATTLTLAPIAATRAGVAVLPEGATVRRSIAEAYDFIDALQVAVAVLQ 124
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLRMKNIVV 164
+ + + + L TDA +V KED +S I A Q +V G + +
Sbjct: 125 ARTSHK-QYNRCIYLFTDA-----RHEVRHKEDLLSLIDALQRDQVALVVIGFDFQPLPA 178
Query: 165 RASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STTSLRGA 207
A E + + +N+ +L + ++ V + SL
Sbjct: 179 AADSQEELNESAVCDASAWAALDRKAQNERILAALCTELGPPSVLVSPAEALESLSLLRC 238
Query: 208 RKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
R+ R + V + GD+ L+ ++ + T EE+ P+L++ + D T E
Sbjct: 239 RRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQDG--VDVVQTIEY 290
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
V++ + E+R++ + G +P S + E ++ K ++++ +GF +
Sbjct: 291 ---VALGGVDEQPCALAKEERVEAFFLGVDRIPCSETDRETMRVKGPRALEAIGFVGEAE 347
Query: 326 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
+ + M + G+ +AL AM K +VR V R + + V
Sbjct: 348 VEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLCVCFA 406
Query: 386 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 445
+ LPFA+DVR FS++P Q + +++ D L+ L + S
Sbjct: 407 RTAASSAEQRHLVLAPLPFADDVRALH---FSEYP-ELQFSAAEEQLMDELIDGLSVDDS 462
Query: 446 GKGEILQPELTPNPALERFYHHLELK 471
+L P+ T NP L+++Y L K
Sbjct: 463 ----VLAPDDTFNPVLQQYYATLRAK 484
>gi|62821807|ref|NP_001017360.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Danio rerio]
gi|58221047|gb|AAW68220.1| Ku80 protein [Danio rerio]
Length = 727
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 180/412 (43%), Gaps = 25/412 (6%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 341
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 342 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
P + A VA+S+L R + + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRTLDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 456
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVDIFKVNHI 478
Query: 457 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI--- 513
PNP +R + L + + D PP+D LK++ E + A + + F +
Sbjct: 479 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCHAPLRDVKTSFPLKVV 538
Query: 514 KENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 573
+ + K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 539 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 594
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
++ ++ D+A + + ++I LL N + Y K++ + A R +L
Sbjct: 595 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVL 643
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV S+ + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSISNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIK 111
+ T+N L + G YE++ V + + + D L++ ++ Q G D+LDA+VV +D+L
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMMPDFELLEEIERELQPGGQQADWLDALVVCMDLL-- 117
Query: 112 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
ET GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 118 -QNETM-GKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|320034646|gb|EFW16589.1| Ku family DNA helicase [Coccidioides posadasii str. Silveira]
Length = 705
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 136/599 (22%), Positives = 241/599 (40%), Gaps = 86/599 (14%)
Query: 83 VQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
++ L+ L P T GD + +I++ +DM+++ Y + K K+ + L+TD T
Sbjct: 67 IRKLRDLVKPSNTNQGDAISSIILAIDMIVR-YCKRLKYKRKIVLVTDGRST-------T 118
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVR-----ASLSGEPHMRVIIENDNLLNIFSKKSSAKT 195
D + +I ++ G+ + + V E +N+++L I + +
Sbjct: 119 DSDGIDSIVSKIKEEGIELVILGVDFDDPDYGFKEEDKDPFKTKNESVLKILADDADGAY 178
Query: 196 LFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKK 249
+ + + + + FRGDL L S + I+V Y +T + P
Sbjct: 179 GTLAQAVEEMTTPRIKVVRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASA 238
Query: 250 Y--SDKAPSTDKFATHEVKVDYEYKSVEDPS-------------------------KVVP 282
+ S P A V + +VE S K V
Sbjct: 239 FALSIAPPKGQSTAESSVTLQNGDSTVETASASNNLSGVRNARSYQVIDENAPGGKKEVE 298
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
+ KGY YG V IS ++ K +++ +GF + N R+ M N+ IA+
Sbjct: 299 RDDLAKGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQK 358
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFN 400
N +A +A+S++ A+ E+ AI R V + G+ ++V +L P + PD
Sbjct: 359 INDKAILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAPLIE-----PDFECLLEV 412
Query: 401 VLPFAEDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG--- 448
LPFAED R ++FP K VS + P++ E V+ +DL+ +
Sbjct: 413 QLPFAEDTRSYRFPPLDKIVTVSGKVVKEHRNLPSDDLLETMGKYVENMDLSEFDENGDP 472
Query: 449 -EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DA 506
+ L E +P + R + ++ H PP+ L+K++ L+ +S ++ D
Sbjct: 473 FQSLALEDCYSPLVHRIDQAIRWRAVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDL 532
Query: 507 FCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGD 565
V K PK K RR +KP SG N D + + + KI
Sbjct: 533 ISISAVKKVPPKAKGRKRRREADKPLSGL---NVDDLLRGEKRL------------KISP 577
Query: 566 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
PI +F+ ++ + + A++ M I + S INY +A+E + +R+ I
Sbjct: 578 ENPIPEFKQTLANTEDISAISDAVKQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELI 636
>gi|296419253|ref|XP_002839231.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635242|emb|CAZ83422.1| unnamed protein product [Tuber melanosporum]
Length = 665
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 144/667 (21%), Positives = 259/667 (38%), Gaps = 116/667 (17%)
Query: 5 REALLLLLDVSPSMHSVLP-----DVEKLCSRL---IQKKLIYGKNHEV-GVILFGTEET 55
++A + ++D+ P++ V P D++ + + I + G+ +V GV+ F TE T
Sbjct: 4 KQATVYVIDLGPTLSRVHPSRGECDLDYALTYIWDKITATMSTGRKTDVIGVVGFRTENT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-------AGDFLDAIVVGVDM 108
+N + GYE++ VL I L+ L+ L + GD AI + VDM
Sbjct: 64 DNAMAT-ADGYENICVLAPIS---QFLLDHLRDLKRALVPSRGKGKGGDGFSAICIAVDM 119
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN----IVV 164
+++ Y K +++ L+TD D Q+ + A G+ + V
Sbjct: 120 IMR-YCRKLKYIRNIVLVTDGRGEWDDEGCEDIVGQIQEEGINLTALGVDFDDEEYGFVE 178
Query: 165 RASLSGEPHMRVII--------ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + +I E L IF + A + ++ R +SP
Sbjct: 179 EGKVPKKARNEKVIKKMVEACNEGGQELGIFGTLAEAISELGKPRLKKIRPKRLRPLSPS 238
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 276
T D+ + + + + P L K P V+ +ED
Sbjct: 239 T--SSDI---------LALLSRNPSVRAPILPKLRGWDP-----------VNARAYQIED 276
Query: 277 PSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
+ + EQ KGY YG +VPIS+ + + E ++++GF R++
Sbjct: 277 GTTAGGMMDIEKEQMEKGYNYGRTIVPISATDEAITVLETEPGLRIIGFVPVEKYRRYFS 336
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M N + N +A++A+S+L A+ E+ + V+
Sbjct: 337 MSTTNAIVGAKDNLKASMALSSLIHALFELESLIDVQ----------------------- 373
Query: 392 NIPDSFYFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDL 442
+PF+EDVR ++FP K + P ++ + V +DL
Sbjct: 374 ----------VPFSEDVRHYRFPPLDKVKTVSGKVLEKHRFLPTPHVEKLMSDYVDKMDL 423
Query: 443 APS----GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 498
+ G+ E + T +P L R + ++ H D P D L K + P TLL
Sbjct: 424 MVANEDEGEPEYATVDETFSPILHRINQIVRWRAVHPDEPLPLAHDILTKYSYPPKTLLG 483
Query: 499 ESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 557
S +A+ +K +PKL + R+ RE+P+ S D +A+ + + V
Sbjct: 484 VSTNALQKLIEASDVKRVDPKL--AGRKRGREQPAPK-------SGLDVEALLTSAAPSV 534
Query: 558 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 617
KI PI DF+ + + + +A ++M + L++ S NY + E+L
Sbjct: 535 PKKAKISSANPIPDFKNKLRTTEDLSDLKEAGKEMLAVLKELIKYSLADANYGRVCEILK 594
Query: 618 ALRKGCI 624
+R+ I
Sbjct: 595 VMREEYI 601
>gi|226293459|gb|EEH48879.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb18]
Length = 633
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 125/580 (21%), Positives = 243/580 (41%), Gaps = 75/580 (12%)
Query: 93 TCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ- 151
T GD + ++++ +DM+++ Y + K K+ + L+TD + D E VS I +
Sbjct: 16 TTEGDAISSLILAIDMIVR-YCKKLKYKRKIVLVTDGTGAM---DTDGMEGIVSKINEES 71
Query: 152 --MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+V G+ + E + EN+ L + ++ S +
Sbjct: 72 IELVVLGVDFDD--PEYGFKEENKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEMEIPR 129
Query: 210 TRDISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPST 257
T+ + + F+GDL L S + I V Y +T + P + S+ +T
Sbjct: 130 TKVVRSMPTFKGDLRLGDPEKYSSALTILVERYYRTYAARPPAASSFVPSSVLSESHQAT 189
Query: 258 DKFAT------------HEVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISS 301
AT V+ Y K + + ++ KGY YG V I+
Sbjct: 190 RSSATLGGESGTGAASLTSVRNARTYQVDDKEAAGRKRDLERDELAKGYEYGRTAVHITE 249
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
++ K + + +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+
Sbjct: 250 SDENITKLETDAALEFIGFIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFEL 309
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 420
A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP +
Sbjct: 310 ECYAVARLVSKAGKAPLVV-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFPPLDEVVT 365
Query: 421 VSWQPNEQQQ---------EAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFYHHL 468
VS + + + AD + KM GEI++ E + +P L R +
Sbjct: 366 VSGKTVTEHRNLPSVNLLSRMADYVDKMELTEKDEDGEIVESLSIENSFSPLLHRIDQAI 425
Query: 469 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL- 527
++ H PP+ + L++++ L A+S+ ++ +K+ P K +R
Sbjct: 426 RWRAVHPSDPLPPVPEVLQRLSRQPEELQAQSKKELNKLVEASDVKKVPPKAKGRKRVRD 485
Query: 528 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDW 584
EKP ++ + + ++ +K ++P I +F+ ++ D
Sbjct: 486 TEKP-----------------LSGLNVEELLRTEKRVRISPDNSIPEFKQSLANSQNLDT 528
Query: 585 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
V A++ M I +++S NY +AVE L +++ +
Sbjct: 529 VKDAVKQMSTIIENQIKHSLGDANYDRAVEGLGTMKEELV 568
>gi|158298889|ref|XP_319031.4| AGAP009910-PA [Anopheles gambiae str. PEST]
gi|157014103|gb|EAA14064.4| AGAP009910-PA [Anopheles gambiae str. PEST]
Length = 681
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 139/597 (23%), Positives = 265/597 (44%), Gaps = 65/597 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDFLDAIV 103
VG++LFGT+ET N+L + GGYE++ ++K + ++ L++ + Q + DA++
Sbjct: 3 VGIVLFGTDETNNQLNVDSGGYENITEAFELKPPNWQTLRILQNQVVQTESEAGWFDALI 62
Query: 104 VGVDMLIK-KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
V + L G+ + G + ++ L D D G E I+ L + ++
Sbjct: 63 VATNFLRNGALGKKFTG--YSIILLSPLFVAGDIDQGQLESVADGISNM-----LGVLHV 115
Query: 163 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT-------LFVDST----TSLRGARK-- 209
+ L + I + + K+ A+T +D+T ++ A +
Sbjct: 116 ITNYVLHPAASVASIFTTTGTFDEQASKTEARTENERYVRQILDATDGTLANINWAERML 175
Query: 210 ----TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 265
+ + P T + L + K+K+ + Y E+K L + K S D A+ V
Sbjct: 176 TFFDAKAVRP-TPWNSTLTIGTKVKLSISAYYIVCEQK--GLGSF--KVDSVDDAASR-V 229
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDAS 324
++ +Y + P+++ + I GY YG VVP + +++K + + LGFT +S
Sbjct: 230 EMRTQYFLNDKPAEI-SMQDIIMGYMYGSTVVPYDNTI--DIEYKSGDCRLACLGFTASS 286
Query: 325 NILR-HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
NIL H K ++ +A+ G + + AL +AM E+N V I V+R+ + + L
Sbjct: 287 NILEEHLSGKGSHVVVAKKGCGASNQKLCALVKAMHELNVVMIATKVYRKDTKP-RLNAL 345
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KML 440
P + K P ++ F +++ +FPS K + +P +Q +A D L+ ++
Sbjct: 346 IP--TYKHGNPCLVMLELI-FKDELCSLKFPSLLKSSKN-KPTNEQYDAVDKLIDSMNLM 401
Query: 441 DLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
D GE + T NP L+ Y + ++ + P ++ +L+++ + ++
Sbjct: 402 DAVDDSNGECREAFALNSTFNPTLQHVYRTVAHRALNPKQPLPDVNSTLQELIDVPKKVV 461
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTR-----RFLREK----PSGSDEPN--GDGSVSDA 546
S+ A++ F +KE +K++TR R + K SGS G + D
Sbjct: 462 DRSKPALEEVRKAFELKE---IKQNTRAEWLQRMAKIKVGTDASGSSSSTTIDSGVLMDE 518
Query: 547 QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 603
+A + + V +G +TP +DF A++ RR + ++N +F LL S
Sbjct: 519 EADDGSDDANRRMVVSVGTVTPAEDF-ALLLRRG--EKFATVATQLQNAVFELLFTS 572
>gi|315054073|ref|XP_003176411.1| Ku80 [Arthroderma gypseum CBS 118893]
gi|311338257|gb|EFQ97459.1| Ku80 [Arthroderma gypseum CBS 118893]
Length = 725
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 150/685 (21%), Positives = 290/685 (42%), Gaps = 91/685 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRL----------IQKKLIYG-KNHEVGVILFGTE 53
+EA + ++DV SM + + CS L I + G K +GV+ T+
Sbjct: 4 KEATVYIVDVGRSMGE--KNGGRECSDLDWAMLYVWDKITTTVATGRKTATIGVVGLRTD 61
Query: 54 -ETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDM 108
+T N++ TK YEH+ + ++I ++ L+ L T GD + +I + VD+
Sbjct: 62 GKTSNDVWTKSKDEAYEHISIFKEIGQALMPDLRELRSLIKTSSTDNGDAISSIALAVDI 121
Query: 109 LIKKYGETYKGKKHLCLITDALCPLKDPDVGTK-EDQVSTIARQMVAFGLRMKNIVVRAS 167
++K Y + K K+ + L+T+ + DPD + +++ ++V G+ +
Sbjct: 122 IVK-YCKKLKYKRKIVLVTNGKGRM-DPDGMNRIAGKINEEGIELVILGVDFDD--PEFG 177
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE 227
+ E V EN++ L ++ S + + + + F+G+ +L +
Sbjct: 178 IKEEDKDAVKAENESSLQKLCDTCDGVYGTLEQAISELDTPRVKVVRGIPSFKGNFKLGD 237
Query: 228 ------KMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAPSTDKFAT 262
+ I+V Y +T + P + ++ + +K +
Sbjct: 238 PENYDSALTIQVERYYRTYAARPPPASSFVLSGAPPEVQETGDSSATLNNASTEAEKSTS 297
Query: 263 HEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
+E+ V +S V D V V + KGY YG V I+ ++ K + + ++
Sbjct: 298 NELTVVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITESDENITKLETKAAL 357
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
+++GF N R+ M + N+ +A+ N++A +A+S++ RA+ E+ A+ R V + G+
Sbjct: 358 EIIGFIPTQNYDRYMNMSNSNVIVAQRTNNKAIMALSSIIRALFELESYAVGRLVSKDGK 417
Query: 376 QSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ-------- 424
++ +L P++ PD LPFAEDVR ++FP + VS +
Sbjct: 418 SPTLI-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTVSGKVVKEHRNL 471
Query: 425 PNEQQQEAADNLVKMLDLAPSG----KGEILQPELTPNPALERFYHHLELKSEHQDAAPP 480
PNE + V+ ++L S + E E +P L R + ++ H P
Sbjct: 472 PNESLLAVMEKYVESMELVGSNDESDQAESFALEDCYSPLLHRIDQAIRWRAIHPTKLLP 531
Query: 481 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNG 539
+ + L+K++ L +S+ ++ +K+ PK+K R +KP
Sbjct: 532 EVPEVLQKLSRQPEELKEKSKPVLEQLIKASDVKKVPPKMKGRKRNRDADKPL------- 584
Query: 540 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 599
S D A+ E + KI I +F+ ++ D + V +++ M +
Sbjct: 585 --SGLDVDALLQGEKR-----QKISPENAIPEFKQALANTDDINTVKDSVKQMCAIVENQ 637
Query: 600 LENSNEGINYPKAVELLVALRKGCI 624
+++S NY +AVE L +R I
Sbjct: 638 IKHSLGDANYDRAVEYLGTMRDELI 662
>gi|451847146|gb|EMD60454.1| hypothetical protein COCSADRAFT_193151 [Cochliobolus sativus
ND90Pr]
Length = 733
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 148/647 (22%), Positives = 264/647 (40%), Gaps = 97/647 (14%)
Query: 41 KNHEVGVILFGTEETE-NELTKEVGGYEHVKVLQDIK-VVDGHLVQSLKHLPQG-TCAGD 97
K+ + VI T+ET+ + +E GY+H++V IK + G + +HL T GD
Sbjct: 49 KSALMSVIGCRTDETDLASIIEEDEGYDHIRVFSKIKQYLLGDIRNLQEHLKSSRTNNGD 108
Query: 98 FLDAIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
L A+ V + M+ G K + + ++TD + D+ E S I
Sbjct: 109 ILSALAVAIHMIDTATRGAKGNPLKYDRRIIIVTDGRGEMVTDDL---EQLTSKIKDPEA 165
Query: 154 AFGLRMKNI------VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA 207
F + + I V + +P +N+ +L F + +
Sbjct: 166 PFEITLLGIDFDDPDVGFKEENKDPQK---AQNEGILKSFIADCDGNFGTLATAIDQLHM 222
Query: 208 RKTRDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKY----------- 250
+ ++ PV +RG L L + K I + Y T K PT +
Sbjct: 223 PRLKETRPVHSYRGSLTLGDPTKYDATITIDIERYPCTMIAKPPTASSFVIRTDATGSSG 282
Query: 251 -----------SDKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVV 297
D+A +TD A +V Y+ +S +P K V ++ +GY YG V
Sbjct: 283 PVIESSAAGTDQDQA-ATDLSAVRNQRV-YQVESQTEPGIKKNVEMDELERGYEYGSTAV 340
Query: 298 PISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA 357
IS ++ VK + +++++L+GF A + R+ + N + + N A + +S+ A
Sbjct: 341 HISESDMNVVKLETQQAMELVGFVRAEDFERYLPLSRTNFIVPQKANQPAQLGLSSFIHA 400
Query: 358 MKEMNKVAIVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFP 414
+ E + A+ R V + + V++ + + P +++ LPF ED+R ++FP
Sbjct: 401 LYEADCYAVARLVAKDLKPPVLLLLVPRIEPEWEALVDVE-------LPFEEDMRRYKFP 453
Query: 415 SFS-KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNP 459
K VS + P + +A + V +DL+ G+ E +PE T +P
Sbjct: 454 PLDRKLTVSGKVITEHKDLPTKNLVDAVSDYVDAMDLSTFGRDEDGNEDEYAKPEDTFSP 513
Query: 460 ALERFYHHLELKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
+ R + ++ H D + P D + L K + P L+ +Q ++A +K+ P
Sbjct: 514 LVHRINQVIRWRATHPDPSLPIPDPPEILIKYSMPPADLVVSAQKQLNAVKQAAELKKVP 573
Query: 518 ---KLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 573
K + +R R+KP SG D V+ + P KI I F+
Sbjct: 574 PKVKGRGKRQRTERDKPLSGLD-------------VDQLLGNPKRV--KIESKNLIPSFK 618
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
+S D D + A + + +I L+ NS Y +A+E + +R
Sbjct: 619 QALSASDDLDAIQDAADGIAKEIRSLISNSVGDNAYQRALEAIRVMR 665
>gi|451997927|gb|EMD90392.1| hypothetical protein COCHEDRAFT_1195612 [Cochliobolus
heterostrophus C5]
Length = 733
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 147/643 (22%), Positives = 260/643 (40%), Gaps = 89/643 (13%)
Query: 41 KNHEVGVILFGTEETE-NELTKEVGGYEHVKVLQDIK-VVDGHLVQSLKHL-PQGTCAGD 97
K+ +GVI T+ET+ + +E GY H++V IK + G + HL P T +GD
Sbjct: 49 KSALMGVIGCRTDETDLAGIIEEDEGYGHIRVFSKIKQYLLGDIRNLQAHLKPSRTNSGD 108
Query: 98 FLDAIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
L A+ V + M+ G K + + ++TD + D+ E S I
Sbjct: 109 LLSALAVAIHMIDTATRGAKGNPLKYDRRIIIVTDGRGEMVTDDL---EQLTSKIKDPEA 165
Query: 154 AFGLRMKNIVVRASLSG---EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
F + + I G E +N+ +L F + + + +
Sbjct: 166 PFEITLLGIDFDDPDVGFKEEKKDPQKAQNEAILKSFMQDCDGNFGTLATAIDQLHIPRL 225
Query: 211 RDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKF---- 260
++ PV +RG L L + K I V Y T K PT + + +T
Sbjct: 226 KETRPVHSYRGSLTLGDPTKYDATITIDVERYPCTMIAKPPTASSFVIRTDATGLSGPVI 285
Query: 261 -----------------ATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISS 301
A +V Y+ +S +P K V ++ +GY YG V IS
Sbjct: 286 ESSAAATDQDQAAADLSAVRNQRV-YQVESQTEPGVKKNVEMDELERGYEYGRTAVHISE 344
Query: 302 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
++ VK + +++++L+GF A + R + N + + N A + +S+ A+ E
Sbjct: 345 SDMNVVKLETQQAMELVGFVRAEDFERFLPLSRTNFIVPQKANQPAQLGLSSFIHALYEA 404
Query: 362 NKVAIVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS- 417
+ A+ R V + + V++ + + P +++ LPF ED+R ++FP
Sbjct: 405 DCYAVARLVAKDLKPPVLLLLVPRIEPEWEALVDVE-------LPFEEDMRRYKFPPLDR 457
Query: 418 KFPVSWQ--------PNEQQQEAADNLVKMLDLAP------SGKGEILQPELTPNPALER 463
K VS + P + A + V +DL+ + E +PE T +P + R
Sbjct: 458 KLTVSGKVITEHKDLPTKNLLNAVSDYVDAMDLSTFDRDEDGNEDEYAKPEDTFSPLVHR 517
Query: 464 FYHHLELKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---K 518
+ ++ H D + P D + L K + P L+A +Q ++A +K+ P K
Sbjct: 518 INQVIRWRATHPDPSLPIPDPPEILTKYSMPPAELVASAQKQLNAVKQAADLKKVPPKVK 577
Query: 519 LKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMS 577
+ +R R+KP SG D V+ + P + +L P F+ +S
Sbjct: 578 GRGKRQRTERDKPLSGLD-------------VDQLLGNPKRVKIESNNLIP--SFKQALS 622
Query: 578 RRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
D D + A + + +I L+ NS Y +A+E + +R
Sbjct: 623 ASDDLDAIQDAADGISKEIRSLISNSVGDNAYQRALEAIRVMR 665
>gi|403412940|emb|CCL99640.1| predicted protein [Fibroporia radiculosa]
Length = 842
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 123/303 (40%), Gaps = 37/303 (12%)
Query: 250 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 309
Y D+ D A+ + D + + + V EQ ++G++YG P ++ +
Sbjct: 310 YIDQEGEMDDNASMDGDQDDDSGTKSKTIEKVEKEQLVRGFKYGSSYAPCPDGQFP--RL 367
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
K +++ GF R Y M +V A+P VA+SA+ +AM E AI R
Sbjct: 368 PTRKGIEICGFFPEKRFRREYAMSEVTYVWADPVQPLQQVALSAVVQAMYEKGAFAIARW 427
Query: 370 VWRQGQQSVVVGVLTPNVSEKIN---------------IPDSFYFNVLPFAEDVREFQFP 414
+ R G +GVL P + EK++ P+S +PFA+DVR F FP
Sbjct: 428 IARDGADP-KMGVLVPTMFEKVDCLLWVQVCRLFYAYTTPESLSIAKMPFADDVRNFAFP 486
Query: 415 SFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE-------ILQPELTPN 458
S + P E Q +A + V +DL +G+ + L+ N
Sbjct: 487 SLDMLINKKGEIIATHPYLPTEDQMDAMERFVDAMDLMEAGEKDDEGNRTPWFDTRLSYN 546
Query: 459 PALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
P++ R H + + PP L K +P +L + AID F +KE
Sbjct: 547 PSIHRVKQAQFHAAVVPDLNTHPLPPTHPELTKYFDPPRRVLKRAHDAIDECKRVFKVKE 606
Query: 516 NPK 518
P+
Sbjct: 607 VPR 609
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 9 LLLLDVSPSMHSV----LP-------DVEKLCS--------RLIQKKLIYG--KNHEVGV 47
+ L+DVSPSM LP D K+ + L +++IY K + GV
Sbjct: 1 MFLVDVSPSMGKTRRVRLPGARSGGLDPMKMTNLEWSLQFVMLKIQEMIYNGRKTDQCGV 60
Query: 48 ILFGTEET--------ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFL 99
ILFG+E T EN + K+ GGYE+V I + + L L GD +
Sbjct: 61 ILFGSEGTFYHPANYTENIINKKNGGYENVLEFIPIAQPNAGTLAKLATLQPSETIGDPI 120
Query: 100 DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
DA++VG++ + + + L+TD P++ D
Sbjct: 121 DALIVGIETQHQYLSSKKTWTRKVVLLTDGENPIEIED 158
>gi|412992252|emb|CCO19965.1| predicted protein [Bathycoccus prasinos]
Length = 745
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 65/363 (17%)
Query: 96 GDFLDAIVVGVDMLIKKY----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 151
GD LDA+ + D+L ++ G+T K + L L P + +G + AR
Sbjct: 132 GDILDALTIACDILAQRMEAMQGKTAKIANEILL----LSPCAEDALGEGSLDENEFARD 187
Query: 152 MVAFGLRMKNIVVRASLS---------GEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
+V ++ K I + + GE + I + N K L +
Sbjct: 188 LVRV-MKEKEITLSVGVGIVDSGGKEEGEEQQKRIGDTSTNTNTNEPKVKVVKLLAEMVK 246
Query: 203 SLRG----------ARKTRDISPVTIFRGDLELSE-----KMKIKVWVYKKTGEEKFPTL 247
G R R +P T FRG+L + + I +W YK+T E T+
Sbjct: 247 QTNGQIEPAMDAIIGRLMRTKTPTTTFRGNLSFGKLGKESYLSIPIWAYKQTMEATAETM 306
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV----VPPEQRIKGYRYGPQVVPI-SSA 302
K Y F ++ D +YK++ SK+ +P EQR++ Y+YG Q +P+ S
Sbjct: 307 KPYG-------AFEGQDLLRDVQYKNI---SKIDGDEIPAEQRVRCYKYGKQSIPMDESV 356
Query: 303 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS-------------RATV 349
E + K +K V+++G D + ++ +F A P + +A
Sbjct: 357 ERQFGAEKMKKGVEIIGTVDLKYVPFWLTTEEPMMFCAWPELTEDEKAGIHTDEYQKACQ 416
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 409
A+SA ARA+ + K A+ R +R+G + G LTP + D F+ LP+AED R
Sbjct: 417 ALSAFARALDKKGKCALCRACFREG-SGIHFGALTPKF---LPEGDFLLFSPLPYAEDWR 472
Query: 410 EFQ 412
Q
Sbjct: 473 ADQ 475
>gi|326474806|gb|EGD98815.1| hypothetical protein TESG_06180 [Trichophyton tonsurans CBS 112818]
Length = 767
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 136/657 (20%), Positives = 273/657 (41%), Gaps = 86/657 (13%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GV+ T+ T +++ TK Y+++ + ++I ++ L+ L P T G
Sbjct: 49 KTATIGVVGVRTDGTSSDMWTKSKDPSYKNISIFKEIGQALMPDLRELRSLIKPSNTDNG 108
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
D + +IV+ +DM I KY + K K+ + L+T+ P+ + T +++ ++V G
Sbjct: 109 DAISSIVLAIDM-IAKYCKKLKYKRKIVLVTNGKGPMDLDGMDTISEKIREEGIELVILG 167
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + + E V EN++ L ++ S + + + +
Sbjct: 168 VDFDD--PEFGVKEEDKDAVKAENESSLEKLCDACDGVYGTLEQAISELDTPRVKVVRGI 225
Query: 217 TIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY-------------------S 251
F+GD +L + + I+V Y +T + P +
Sbjct: 226 PSFKGDFKLGDPDKYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQQTEDSSANLK 285
Query: 252 DKAPSTDKFATHEVKVDYEYKS--VEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEW 304
+ T K ++E+ +S V D V V + KGY YG V I+ +
Sbjct: 286 NARADTGKSTSNELTSVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITDSME 345
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
K + + +++++GF N R+ M + N+ IA+ N++A +A+S++ A+ E+
Sbjct: 346 NITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKAIIALSSIIHALHEVESY 405
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVS 422
A+ R V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 406 AVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTM 459
Query: 423 WQ---------PNEQQQEAADNLVKMLDLA-PSGKGEILQP---ELTPNPALERFYHHLE 469
P+E A + V+ ++L P +G+ ++ + +P L R +
Sbjct: 460 SGKVVKEHRNLPDENLLAAMEKYVENMELVQPGEEGDQVESFALQDCYSPLLHRVDQAIR 519
Query: 470 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE 529
++ H P + + L+ + L+ +S+SA++ Q + + K K ++ +
Sbjct: 520 WRATHPTKPLPSIPEILQNQSRQPEELMEQSKSALE----QLIKASDVKKGKLKPQYPKR 575
Query: 530 KPSGSDEPNGDGSVSDAQAV-----------NSMESKPVVTVD-----------KIGDLT 567
+ G+ P + A+ N + KP+ +D +I
Sbjct: 576 RTRGALIPPHHHHICLLTAIVVPPKVKGRKRNRITDKPLSGLDVDALLQGEKRQRISPEN 635
Query: 568 PIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
I +F+ ++ D + V ++++ M I +++S NY + VE L +R I
Sbjct: 636 AIPEFKQALASTDDINTVKESVKQMCAIIENQIKHSLGDANYDRVVEYLGTMRDELI 692
>gi|426201921|gb|EKV51844.1| hypothetical protein AGABI2DRAFT_148177 [Agaricus bisporus var.
bisporus H97]
Length = 844
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 25/254 (9%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 346 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 403
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 404 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 459
Query: 404 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 449
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 460 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 519
Query: 450 --ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 504
P + NPAL R H + ++ PP L K +P LL ++ AI
Sbjct: 520 TPWFNPAESYNPALHRTKQAMFHCAVVTDIASNPLPPPHPELLKYFDPPKKLLKRAKPAI 579
Query: 505 DAFCGQFVIKENPK 518
F +KE PK
Sbjct: 580 VQAQEAFKVKEIPK 593
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLST 114
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
GD +D ++V + + G+ + + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAEYLGKKKSWTRKIVLLTNGECPFE 157
>gi|390603931|gb|EIN13322.1| ku80-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 864
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 25/275 (9%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
V E ++G++YG VP + + + K + + GF A N R M +V A
Sbjct: 352 VEKEDLVRGFKYGATYVPCPEGAFP--RLETRKGIDICGFFKAKNFRRELAMGEVYYVWA 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
+P +A+S++A+AM+E +AI R V R G +GVL P+V EKI D +
Sbjct: 410 DPAVPAQQIALSSIAQAMEEKGVMAIARWVSRDGMDP-KMGVLAPSVFEKI---DCLLWV 465
Query: 401 VLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 449
+PFA+DVR++ F S ++ P +QQ+A D V +DL +G+ +
Sbjct: 466 QMPFADDVRKYTFASLDTLINKNGEVVEEHAYLPTPEQQDAMDAFVDAMDLMEAGEKDEE 525
Query: 450 -----ILQPELTPNPALERFYHHLELKSEHQD---AAPPPLDDSLKKITEPDPTLLAESQ 501
L+ NPA+ R L + QD PP L K EP +L +
Sbjct: 526 GNRYPWYDTRLSYNPAIHRTKQALFHSAVAQDLNSNPLPPPHPELLKYFEPPKKVLKRAA 585
Query: 502 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 536
AI+ F ++E PK R+ + DE
Sbjct: 586 PAIEHAKAAFKVREVPKRVAKGRQDGHRRARDEDE 620
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 9 LLLLDVSPSMHSVL-------PDVEKLCSRL-------------IQKKLIYG-KNHEVGV 47
+ L+D+SPSM + P E+ + + IQ+ + +G K + GV
Sbjct: 12 MFLVDISPSMGKLREVELPPGPKGERRTTEVTNLEWGLQFVKLKIQEMIFHGRKTEQCGV 71
Query: 48 ILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGV 106
ILFGTEET N + ++ GYEHV I + + L L +GD +DA++VG+
Sbjct: 72 ILFGTEETHNLVHDQMKSGYEHVSEYIPISQPNAGTLAKLSKLQPSEVSGDPIDALIVGL 131
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLK 134
+ + G+ + + L+TD P++
Sbjct: 132 EAQAQYLGKKKTWTRKIVLLTDGESPME 159
>gi|430811714|emb|CCJ30847.1| unnamed protein product [Pneumocystis jirovecii]
Length = 577
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 226/520 (43%), Gaps = 66/520 (12%)
Query: 33 IQKKLIYGKNHE-VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--L 89
I K+ G+ + VGVI F T ET N++ + Y+++ VL I+ + ++ LK +
Sbjct: 58 ISSKIFSGRKTDYVGVIGFKTNETNNDMEDD-EFYKNISVLCPIQQITIKQIKELKKQLV 116
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T G ++ LI KY K K+L LIT+ + + D QV ++
Sbjct: 117 PSNTNIG----DGIIIGIDLISKYCGNLKYIKNLILITNGMSYMDFSDSEKIAYQVKHMS 172
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN---LLNIFSKKSSAKTLFVDSTTSLRG 206
+ FG+ + S + + II+ +N LL + + ++ SL
Sbjct: 173 INISIFGIDFDS----YSYGYKEDFKSIIKMNNEKELLKFANICNGTFASMIEVINSLNT 228
Query: 207 ARKTRDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPT------LKK----- 249
+ R + PV++F G L + + ++I + Y +T K P+ LKK
Sbjct: 229 SN-FRKVHPVSLFNGTLTIGDPQNYPDVVEIMIQRYPRTRLAKMPSAHRYNVLKKSPKPT 287
Query: 250 -YSDKAPSTDKFATHEVKVDY--------EYKSVEDPS-KVVPPEQRIKGYRYGPQVVPI 299
Y+++ T + ++ K +Y YK E+ S K + E GY YG ++P
Sbjct: 288 NYTEQLAQTSTNSNNDNKNEYFSEILTTKNYKIEENGSEKEISKEDLELGYVYGKTIIP- 346
Query: 300 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 359
+S + +K+K + +LGF + R + + N+ + N + +++S+L M
Sbjct: 347 TSIIVDELKYKTNIQLTILGFIKNKSFPRFMAIGESNIIVPAKTNLNSKISLSSLIHGML 406
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVREFQFPS 415
+ N +A+ + V + + ++ ++ P++ + I +P LPFAED R F+FPS
Sbjct: 407 KTNTLALAKIVTKTDKCPEMI-MIAPSIENEFECLIELP-------LPFAEDCRNFKFPS 458
Query: 416 FSKFPVSWQPNEQQQEAADNL----VKMLDLAPS------GKGEILQPELTPNPALERFY 465
K+ +S E D+L V +DL+ + K +L+ + N A+ R
Sbjct: 459 MKKYQISNIETNSSIENIDSLMEKYVTKMDLSNTVSDTYIQKTNLLESKYIHNMAIYRLN 518
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAID 505
+ + + ++ P L +K P LL + I+
Sbjct: 519 QAISHNAIYPNSELPNLLPKIKHFMYPSINLLKTCEEEIE 558
>gi|409083028|gb|EKM83385.1| hypothetical protein AGABI1DRAFT_96384 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 862
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 25/254 (9%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 364 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 421
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 422 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 477
Query: 404 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 449
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 478 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 537
Query: 450 --ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 504
P + NPAL R H + ++ PP L K +P LL ++ AI
Sbjct: 538 TPWFNPAESYNPALHRTKQAMFHCAVVTDIASNPLPPPHPELLKYFDPPKKLLKRAKPAI 597
Query: 505 DAFCGQFVIKENPK 518
F +KE PK
Sbjct: 598 VQAQEVFRVKEIPK 611
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLSP 114
Query: 92 GTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLK 134
GD +D ++V + + G+ + + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAEYLGKKKSWTRKIVLLTNGECPFE 157
>gi|392572067|gb|EIW65239.1| SPOC domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 676
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 28/279 (10%)
Query: 261 ATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 319
A +V+ D E ++ D V V E+ ++GY+YG P + +P + + G
Sbjct: 162 AHGDVEDDAETQAERDKRLVKVEKEELVRGYKYGASFAPAPEEGFPKFPVRP--GMDICG 219
Query: 320 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 379
F R M +V A+P + VA+S++ AM E + VAI R V + +
Sbjct: 220 FFPQERFRREMAMGEVYYVWADPASPMQQVALSSIVNAMNETHVVAITRWV-KTEKGEPK 278
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQ 430
+GVL P V E+I D F + +PFA+D+R F F S + P +Q
Sbjct: 279 MGVLWPTVFEEI---DCFLWVQMPFADDIRNFTFASLENLITKKGEVVKEHPYLPTNEQM 335
Query: 431 EAADNLVKMLDLAPSGKGE-------ILQPELTPNPALERF----YHHLELKSEHQDAAP 479
+A + V +DL +G+ + L+ NPA+ R +H +K + P
Sbjct: 336 DAMEKFVDAMDLMDAGEKDEDGNRMPWFDTTLSYNPAIHRMKQAQFHAAIVKDLNTHPLP 395
Query: 480 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 518
PP ++ LK EP +L ++ AI+ F ++E PK
Sbjct: 396 PPHEELLKYF-EPPRRVLKRAREAIEECKTTFNVREAPK 433
>gi|307187343|gb|EFN72471.1| ATP-dependent DNA helicase 2 subunit 2 [Camponotus floridanus]
Length = 576
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 122/572 (21%), Positives = 245/572 (42%), Gaps = 75/572 (13%)
Query: 3 RTREALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ +E+++ L+ + H S+L D K + +IQ+K+ E+GVIL G +
Sbjct: 5 KLKESIIFLVKIGIVRHGTQSNSMLLDKAKFILKHIIQRKIFLCPKDEIGVILMGCD--- 61
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N + + E+++ L ++V + +L++S++ L +++AI ++ + +
Sbjct: 62 NSKSNSITELENIQELCRVQVGNWNLIESIEKLQTTNQNYSWMEAIYAAIEYI--NHECV 119
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRV 176
K ++ + L++D +ED VS +A +LS E +
Sbjct: 120 DKSERKIILLSD---------FNEEEDVVSQFQMDDIA-----------KTLSSEEISLI 159
Query: 177 IIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKT--RDISPVTIFR----------GDL 223
I +L NI +++++ L + + G T R +S V ++ +
Sbjct: 160 AIGERDLDNIDKDSQTASEGLLMSVLREIGGQYLTFERAMSDVCFYKRPSTKPMPWYCQM 219
Query: 224 ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP 283
EL + K E K P + ST EV + + ++ +
Sbjct: 220 ELGNFHIPIAAISKIPTEVKLPKMILMG--KTSTPDMPEQEVPIKNIAQWTDNNRTIHTE 277
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
E I+GY YG + +P+S + + K EK K+ GFT NI Y++ D ++ P
Sbjct: 278 EDIIRGYVYGGKSIPVSDETEKTMTPKTNEKCYKIHGFTAKENIPMEYWLSD-GTYVIVP 336
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV- 401
N + +L +AM + N +AIV V+R ++ +V + I++P+ + +
Sbjct: 337 ANESVSAPFYSLVQAMVDKNVIAIVEKVYRANTEANMVALFP-----SIDVPNEPWCLIE 391
Query: 402 --LPFAEDVREFQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSGKGEILQ---- 452
LPF D + + ++ P+ + Q +++Q +A D+L+ L+L + + +
Sbjct: 392 IGLPFERD-----YGAIAQRPLKFVMKQLSKEQNDAIDDLLTSLELPEAVDDDAIDINEK 446
Query: 453 --PELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 510
P P+P + + L ++ D PP+ D +K + E + + + +
Sbjct: 447 YLPGYMPDPGTQHMWDMLAARALKPDKPLPPIADDVKNLLEQPEFMKEKCKPVTERIKNL 506
Query: 511 FVI--KENPKLKKSTRRFLREKPSGSDEPNGD 540
F + K++P +K RR +EK + + NGD
Sbjct: 507 FSLEKKQSPNTRK--RRKSKEKDNEQSD-NGD 535
>gi|303310907|ref|XP_003065465.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105127|gb|EER23320.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 739
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 141/616 (22%), Positives = 243/616 (39%), Gaps = 95/616 (15%)
Query: 66 YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHL 123
Y H+ V Q+I + ++ L+ L P T GD DM+++ Y + K K+ +
Sbjct: 93 YAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQGD---------DMIVR-YCKRLKYKRKI 142
Query: 124 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR-----ASLSGEPHMRVII 178
L+TD T D + +I ++ G+ + + V E
Sbjct: 143 VLVTDGRST-------TDSDGIDSIVSKIKEEGIELVILGVDFDDPDYGFKEEDKDPFKT 195
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIK 232
+N+++L I + + + + + + + FRGDL L S + I+
Sbjct: 196 KNESVLKILADDADGAYGTLAQAVEEMTTPRIKVVRGIPSFRGDLRLGDPSQYSTGLTIQ 255
Query: 233 VWVYKKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPS------------ 278
V Y +T + P + S P A V + +VE S
Sbjct: 256 VERYYRTYVARPPAASAFALSIAPPKGQSTAESSVTLQNGDSTVETASASNNLSGVRNAR 315
Query: 279 -------------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
K V + KGY YG V IS ++ K +++ +GF + N
Sbjct: 316 SYQVIDENAPGGKKEVERDDLAKGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSEN 375
Query: 326 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
R+ M N+ IA+ N +A +A+S++ A+ E+ AI R V + G+ ++V +L P
Sbjct: 376 YERYMNMSTSNVIIAQKINDKAILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAP 434
Query: 386 NVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ--------PNEQQQEAAD 434
+ PD LPFAED R ++FP K VS + P++ E
Sbjct: 435 LIE-----PDFECLLEVQLPFAEDTRSYRFPPLDKIVTVSGKVVKEHRNLPSDDLLETMG 489
Query: 435 NLVKMLDLAP-SGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 490
V+ +DL+ G+ Q E +P + R + ++ H PP+ L+K++
Sbjct: 490 KYVENMDLSEFDENGDPFQSLALEDCYSPLVHRIDQAIRWRAVHPTKPLPPVPKVLEKLS 549
Query: 491 EPDPTLLAESQSAI-DAFCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQA 548
L+ +S ++ D V K PK K RR +KP SG N D + +
Sbjct: 550 HWPEELVKKSHDSLRDLISISAVKKVPPKAKGRKRRREADKPLSGL---NVDDLLRGEKR 606
Query: 549 VNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 608
+ KI PI +F+ ++ + + A++ M I + S IN
Sbjct: 607 L------------KISPENPIPEFKQTLANTEDISAISDAVKQMSAIIEDQIRQSLGDIN 654
Query: 609 YPKAVELLVALRKGCI 624
Y +A+E + +R+ I
Sbjct: 655 YDRAIEGIGTMREELI 670
>gi|169617443|ref|XP_001802136.1| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
gi|160703409|gb|EAT80944.2| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
Length = 618
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 175/394 (44%), Gaps = 45/394 (11%)
Query: 251 SDKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
++ P TD A +V Y+ + E+P K V ++ +GY YG V IS ++ VK
Sbjct: 177 GEEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEMDELERGYEYGRTAVHISESDMNVVK 235
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
+ + L+GF A R+ + N + + GN A +++S+ A+ E + A+ R
Sbjct: 236 LETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRGNQAAQLSLSSFIHALYEADCYAVAR 295
Query: 369 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ-- 424
V ++ + V+V +L P +I + +V LPF ED+R ++FP K +S +
Sbjct: 296 LVTKELKPPVIV-LLVP----RIEVEWEALVDVELPFEEDMRRYKFPPLDRKLTISGKVI 350
Query: 425 ------PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLELKS 472
P ++ +A V +DL+ G+ E +PE T +P + R H + ++
Sbjct: 351 TEHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNPAEYAKPEDTFSPIVHRIGHIIRWRA 410
Query: 473 EHQDAAPPPLDDS--LKKITEPDPTLLAESQSAIDAF-CGQFVIKENPKLKKSTRRFL-- 527
H D + P S L K P LL S S +A V K PK+K +R
Sbjct: 411 THPDPSLPMPPPSDILTKYANPPADLLDASTSQFEALKKAARVSKVPPKVKGRGKRNRAE 470
Query: 528 REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 586
R+KP SG D ++++ P +L P F+ ++ D + +
Sbjct: 471 RDKPISGLD-------------IDALLGNPNRVKIDPSNLVP--SFKNALAASDDLETIK 515
Query: 587 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 620
+A + M +I L+ +S Y +A+E L +R
Sbjct: 516 EAAQSMSTEIRSLIRSSVGDSGYGRALEALRVMR 549
>gi|170084899|ref|XP_001873673.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651225|gb|EDR15465.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 628
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E+ ++G++YG VP ++ K K + + GF N R M ++ A+P
Sbjct: 150 EELVRGFKYGTTYVPCPEGQFP--KLPTRKGIDICGFFYTKNFRRELSMGEIQYVWADPS 207
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+ + VA+S++ +AM E +AI R V + G +GVL P +K+ D ++ +P
Sbjct: 208 SPQQQVAISSIVQAMYEKEVMAIARWVTKDGMDP-KMGVLWPTRFDKV---DCLLWSHMP 263
Query: 404 FAEDVREFQFPSFSKFPVS----------WQPNEQQQEAADNLVKMLDLAPSGKGE---- 449
FA+DVR++ F S + VS + P + Q A D V +DL +G+ +
Sbjct: 264 FADDVRKYTFASLDQL-VSKKGEAIKEHPYIPTKAQITAMDEFVDAMDLMDAGEKDEEGS 322
Query: 450 ---ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
L+ NPA+ R +H + + PPP D L K EP +L ++
Sbjct: 323 RLPWFDTLLSYNPAVHRTKQAIFHSAVVSDIETNPLPPPHPD-LVKYFEPPKRVLKRARG 381
Query: 503 AIDAFCGQFVIKENPK 518
++ F +K+ PK
Sbjct: 382 PLEECKSAFKVKQVPK 397
>gi|322789872|gb|EFZ15019.1| hypothetical protein SINV_15786 [Solenopsis invicta]
Length = 527
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 219/557 (39%), Gaps = 94/557 (16%)
Query: 6 EALLLLLDVSPSMHS-----VLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
E+L+ L+DV L D EK + +IQKK+ E+GVIL G+ E+
Sbjct: 1 ESLIFLVDVGVPCQDDQSSLQLLDKEKYILKHIIQKKIFLRPKDEIGVILMGSGSNESSS 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKG 119
E +++V+ L ++V + L+++++ L + +++AI VD +
Sbjct: 61 ATE---FDNVQELCSMQVGNWDLIKNIERLQTTNQSCSWMEAIYAAVDYI---------- 107
Query: 120 KKHLCLITDALCPLKDPDVGTKEDQ-----VSTIARQMVAFGLRMKNIVVRASLSGEPHM 174
K C+ L P+ D D T + + I Q + F M ++
Sbjct: 108 -KRECVGEKTL-PIADEDSQTASEVLLMEVIEQIGGQYLTFENAMSDVR----------- 154
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVW 234
F K+ S K + +EL +
Sbjct: 155 ------------FYKRPSTKPF---------------------QWHCQMELGDFCFPITG 181
Query: 235 VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGP 294
+ K E K P + + S + A EV + + ++ + E I+GY YG
Sbjct: 182 IAKMPNEVKLPDMTLMGKLSASNKEEADKEVPIKNVAQWTDNNRTIHTQEDIIRGYVYGG 241
Query: 295 QVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSA 353
+ +P+S + + K EK K+ GFT N+ ++ D + I P N A+ +
Sbjct: 242 KAIPVSDESKKRMTPKNNEKCYKIHGFTARENVPMECWLSDGSYVIV-PANESASAPFYS 300
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVRE 410
L +AM + N VAIV V+R ++ ++ + +++P+ + + LPF D
Sbjct: 301 LVQAMVDKNVVAIVEKVYRANTEANMMALFP-----SVDVPNEPWCLIEIGLPFERD--- 352
Query: 411 FQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSGK-----GEILQPELTPNPALE 462
+ + ++ P+ Q +++Q +A D+L+ L+L + GE P P+P +
Sbjct: 353 --YGAIAQRPLKKMMDQLSKEQNDAIDDLLTSLELPDAADDDVTGGEKYLPGYMPDPGAQ 410
Query: 463 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 522
+ L ++ + D PP+ D L + EP P L E + E K K
Sbjct: 411 HMWDTLVARALNPDKPLPPIADDLLNLLEP-PEFLKEKCKPVTERIKNLFFLEKKKPLKR 469
Query: 523 TRRFLREKPSGSDEPNG 539
R +E+ + N
Sbjct: 470 KRDISQEENDKQSDANS 486
>gi|332018465|gb|EGI59055.1| ATP-dependent DNA helicase 2 subunit 2 [Acromyrmex echinatior]
Length = 651
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 222/494 (44%), Gaps = 42/494 (8%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVV 104
+GVIL G++ + + + G ++ + L ++++ + +L++S++ L ++DAI
Sbjct: 1 MGVILMGSDSST---SDSITGLDNAQELCNMQIGNWNLIKSIEKLQPTNQTCSWMDAIYA 57
Query: 105 GVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI---ARQMVAFGLRMKN 161
V+ + K+ K ++ + L++ D+ ED + + A ++A G R +
Sbjct: 58 AVEYI--KHECVDKCERKIILLSSFNEEENVVDMFQAEDIIEILNSEAVSLIAIGERALH 115
Query: 162 IVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 221
+ S + + L+N+ + + F + + +R ++ P+ +R
Sbjct: 116 EIDEDSQTPSEAL--------LMNVLQQINGQYLTFEHAMSDVRFYKRP-STKPLP-WRC 165
Query: 222 DLELSEKMKIKVWVYKKTGEEKFP--TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK 279
+EL E + K E K P L + + + DK EV + + +++
Sbjct: 166 LMELGELCIPIAGISKMPSEVKLPEMVLMGKTSMSNTPDK----EVPIKNVVQWMDNNRT 221
Query: 280 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLF 338
+ E I+GY YG + +P+S +A+ K EKS K+ GFT N+ Y++ D +
Sbjct: 222 IHTEEDIIRGYVYGGKAIPVSDEAKKAMTPKNNEKSYKIHGFTKRENVAMEYWLSDGSYV 281
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
I P N A+ +L +AM + N +AIV V+R ++ +V L P+V + N P
Sbjct: 282 IV-PANEAASAPFYSLVQAMVDKNVIAIVEKVYRANTEANMVA-LFPSVDVE-NEPWCLI 338
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE---AADNLVKMLDLAPSGKGEILQ--- 452
LPF D + + ++ P+ N+ QE A D+L++ L+L + + +
Sbjct: 339 EIGLPFERD-----YGAIAQKPLKGMTNQLSQEQDNAIDDLLRSLELPDAADDDTISSSE 393
Query: 453 ---PELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCG 509
P P+P + + L +++ + D PP+ D L + E + A+ + +
Sbjct: 394 KYLPGYMPDPGTQHMWDVLTVRALNPDKPLPPIADDLLNLLEQPEFIKAKCKPVTERIKN 453
Query: 510 QFVIKENPKLKKST 523
F +++ +KS+
Sbjct: 454 LFFLEKKKPFRKSS 467
>gi|302656140|ref|XP_003019826.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
gi|291183598|gb|EFE39202.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
Length = 675
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 134/627 (21%), Positives = 252/627 (40%), Gaps = 106/627 (16%)
Query: 61 KEVGGYEHVKVLQDIKVVDGH------LVQSLKHL-----PQGTCAGDFLDAIVVGVDML 109
KE+G Y VK + +DG L+ LK L P T GD + +I++ +DM
Sbjct: 17 KEIGQYVFVKP----RGLDGSNTSLRALMPDLKELRSLIKPSNTDNGDAISSIILAIDM- 71
Query: 110 IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLS 169
I KY + K K+ + L+T+ P+ + T ++ ++V G+ ++ +
Sbjct: 72 ITKYCKKLKYKRKIVLVTNGKGPMDLDGMDTIAGKIREEGIELVILGVDFDDL--DFGVK 129
Query: 170 GEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE-- 227
E V EN++ L ++ S + + + + F+GD +L +
Sbjct: 130 EEDKDAVKAENESSLQKLCDVCDGVYGTLEQAISELDTPRVKVVRGIPSFKGDFKLGDPD 189
Query: 228 ----KMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAPSTDKFATHE 264
+ I+V Y +T + P + D T K ++E
Sbjct: 190 KYDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQETGDSSANLKDARTDTGKSISNE 249
Query: 265 VKVDYEYKSVE-DPSKVVPPEQRI------KGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
+ +S + S VV ++ + KGY YG V I+ ++ K + + ++++
Sbjct: 250 LTSVRNARSYQVTDSGVVGGKRDVERDALAKGYEYGRTAVHITDSDENITKLETKAALEI 309
Query: 318 LGFTDASNILRHYYMKDVNLFIAEP--------GNSRATVAVSALARAMKEMNKVAIVRC 369
+GF N+ + +K + + P N++A +A+S++ A+ E+ A+ R
Sbjct: 310 VGFIPIENVC--FIIKSILIIYKLPFTDYVLIRTNNKAIIALSSIINALHEVESYAVGRL 367
Query: 370 VWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ--- 424
V + G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 368 VTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVV 421
Query: 425 ------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAA 478
PNE A + V+ ++L P E + ++ H
Sbjct: 422 KEHRNLPNENLLAAMEKYVENMELV--------------QPGEEGVDQAIRWRAIHPTKP 467
Query: 479 PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEP 537
PP+ L+K + L+ +S+SA++ +K+ PK+K R + +KP
Sbjct: 468 LPPIPKVLQKQSRQPDELMEQSKSALEQLIKASDVKKVPPKVKGRKRNRITDKPL----- 522
Query: 538 NGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIF 597
S D A+ E + +I I +F+ ++ D + V K+++ M I
Sbjct: 523 ----SGLDVDALLQGEKR-----QRISPENAIPEFKQALANTDDINTVKKSVKQMCAIIE 573
Query: 598 GLLENSNEGINYPKAVELLVALRKGCI 624
+++S NY + VE + +R I
Sbjct: 574 NQIKHSLGDANYDRVVEYIGTMRDELI 600
>gi|393218981|gb|EJD04469.1| SPOC domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 913
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+Q IKG++YG P ++ + K + + GF R M +V A+P
Sbjct: 377 DQLIKGFKYGASYAPCPDGQFP--RLSTRKGMDICGFFPDHLFRRELAMSEVQYVWADPS 434
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
+S+ +++S++ +AM + VAI R V R +G+L P EK+ D F + +P
Sbjct: 435 SSQTQLSLSSIVQAMLSRHVVAIARYVSRDDMDP-KMGLLIPRQLEKV---DCFLWLQMP 490
Query: 404 FAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKMLDLAPSG----KG 448
FA+DVR++ FPS +K P + P E+Q E+ + V +DL +G G
Sbjct: 491 FADDVRKYTFPSLENLVSKKGERITKHP--FLPTEEQMESMEKFVDGMDLMHAGDKDETG 548
Query: 449 E---ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
E P L+ NPA+ R +H + + PPP ++ +K + EP +L +
Sbjct: 549 ERTPWFDPRLSYNPAVHRIKQALFHAAVVSDLRTNPLPPPHEEVIKYL-EPPRRVLKRAL 607
Query: 502 SAIDAFCGQFVIKENPKLKKSTRR 525
A++ F +++ PK TR+
Sbjct: 608 PALEECKQAFKVRQVPKRVMRTRK 631
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 9 LLLLDVSPSMHSV----LPDVEKLCSRL----------------IQKKLIYG-KNHEVGV 47
+ +DVSPSM S+ + D + +R IQ+ + +G K + GV
Sbjct: 12 MFCIDVSPSMGSLRSVEVSDSQDGTTRTVEMTNLAWAMQYVLLKIQEMIFHGRKTDQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
ILFGTEET N + GGYEHV L I + + L++L T GD +DAI+V ++
Sbjct: 72 ILFGTEETNNVVNDSNGGYEHVTELIPIGQPNTGTLTKLQNLQPSTEIGDPIDAIIVAIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPL--KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ + + L ++TD P+ +D DV K+ IA ++ + V+
Sbjct: 132 TQDRYLAKKKSWTRKLVVLTDGENPIEVEDWDVTVKKINDLQIATTIIGVDFDDEEFGVK 191
Query: 166 ASLSGEPHMRVIIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARK-----TRDISPVTIF 219
E + +EN+ + F S + + +L ++ T+ T
Sbjct: 192 Q----EDKSPIKLENERFFHEFISSLHDDLGMIGTAAYALHECQRPEVKETKSALLGTTL 247
Query: 220 R-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKY--------SDKAPST 257
R GD++ E +++ + + K T PTLKK+ SD+AP+T
Sbjct: 248 RLGDVDTRPEEAIELPIKMSKCTAAVHPPTLKKFAKRVVSDTSDEAPAT 296
>gi|19113583|ref|NP_596791.1| Ku domain protein Pku80 [Schizosaccharomyces pombe 972h-]
gi|74624850|sp|Q9HGM8.1|KU80_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Pombe Ku80
gi|9929270|emb|CAC05245.1| Ku domain protein Pku80 [Schizosaccharomyces pombe]
Length = 695
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 206/496 (41%), Gaps = 43/496 (8%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-- 89
L K L K VG++ + ++T+N+L E Y ++ VL I+ +QS+
Sbjct: 40 LSHKFLANRKTDVVGIVGYKCDDTKNDLA-EQEAYWNISVLYPIQTALFSKLQSVSQTLK 98
Query: 90 PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 149
P T GD + AIVV D L+ ++ + K KK + ++T A + D +Q+
Sbjct: 99 PSNTMQGDLISAIVVSFD-LMARHCKKNKWKKKMIVLTAARGIIDFSDYIGIAEQLLQHD 157
Query: 150 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK 209
+ +G+ + S + + EN+ + F + + + G
Sbjct: 158 VFLGVYGVDFDQEDINYSEPLKESQKK--ENEVRIQEFVESCHGQYCTFQQIYNNIGKPW 215
Query: 210 TRDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R + PV IFRG + + + I+V Y +T K PT + + S + +
Sbjct: 216 VRKVRPVAIFRGTFSIGNRDSKDTSISIQVERYPRTRLTKPPTSSAFYENDMSKNYECLN 275
Query: 264 EVKVDYEYKSVE-------------DP----SKVVPPEQRIKGYRYGPQVVPISSAEWEA 306
+ E KS+E DP S V E GY YG +VPIS ++ +
Sbjct: 276 IENSNVENKSMESDAVSTVRSYMVRDPKTNDSFEVKREDLESGYSYGRTIVPISRSDEDV 335
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
+ ++LGF S++ +Y + D N+ + + + + + SA ++++ ++ A+
Sbjct: 336 LALDTIPGYEILGFIPKSSLPIYYTISDTNIIVPK-DDFESKLNFSAFVQSLEREHRYAL 394
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKFPVSWQP 425
R V + V++ VL P V K + + ++ LPFAEDVR + F F K + +
Sbjct: 395 ARFVSKDKGVPVLL-VLMPYVEFKRH----YLVDIQLPFAEDVRPYSFSEFEKLS-NEED 448
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP----PP 481
Q A N + +DL S G P P H L+ + +P P
Sbjct: 449 MRQIDFAVSNYIDNMDLDSSDCG--FNPPFEPENTFSMIPHRLQQAISYYANSPEGDLPQ 506
Query: 482 LDDSLKKITEPDPTLL 497
+ L + T P +LL
Sbjct: 507 PNIYLTRYTNPPKSLL 522
>gi|388856904|emb|CCF49505.1| related to ATP-dependent DNA helicase II, 80 kDa subunit [Ustilago
hordei]
Length = 810
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 24/237 (10%)
Query: 281 VPP---EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+PP E + ++ G ++P+ + ++ KS+++L F +AS R Y M +
Sbjct: 364 LPPNSDENFTRAWKLGASLIPVPEESFGSLD--THKSMQILHFFNASAYRREYNMDQIWY 421
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
A+ +A + +S L RAM EM+ +A+VR V + G + +GV+ P V EK N + F
Sbjct: 422 VFADHAQVKAQLQLSTLVRAMAEMDVLAVVRLVRKDGAEP-ELGVIKPKV-EKHN--EYF 477
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKG 448
+++ PF ED+R F FP + + P+EQ QEA D + L+L P
Sbjct: 478 FYSKAPFREDLRRFPFPPLDRVITTDGTEIRIAPTIPDEQDQEAMDAFIDSLEL-PGEWY 536
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAA--PPPLDDSLKKITEPDPTLLAESQSA 503
++LQ + NPA+ + + H DA P P + +K + P A S +A
Sbjct: 537 DVLQ---SYNPAIHGLKTAVRHRFIHPDAKHLPAPHPELVKYLEAPYEVSKAASDAA 590
>gi|145349222|ref|XP_001419039.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579269|gb|ABO97332.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 640
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 56/424 (13%)
Query: 41 KNHEVGVILFGTEETENELTK----------EVGGYEHVKVLQDIKVVDGHLVQS--LKH 88
++H G+ LFG +T N++ E G + L+ + G + L+
Sbjct: 67 RDHCFGLTLFGARDTSNDVAAAALDDDGEGDEYAGIVTARQLRPPESKTGLEYERDILET 126
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKY---GETYKGKKHLC-------LITDALCPLKDPDV 138
A D +A+ V D LI++Y G KK L LITDA
Sbjct: 127 AAAVDGAADVPEALAVACDSLIRQYSPEGVNAATKKRLAGCVKDIVLITDATGAAT-MQS 185
Query: 139 GTKEDQVSTIARQMVAFGLRMKNIVVRAS----LSGEPHMRVII-----END-----NLL 184
++ V+T+ M A +R+K VV A G+ +RV E D
Sbjct: 186 AVDDEFVATLLDGMKAQNVRLKVGVVDACEMSRARGDAGVRVTASATFREPDFEALRQAC 245
Query: 185 NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKF 244
++ + + V ++L + + + P + +RG L + V +YK E
Sbjct: 246 DVLAAADAGNDSAVVGASALLLDLQIKRVRPTSGYRGFLSFGFNAGVNVALYKLNTEAVP 305
Query: 245 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVED-PSKVVPPEQRIKGYRYGPQVVPISSAE 303
L +YS++ + +H+ V+ Y++V D + VPPE+ +K +RYG Q +PI +
Sbjct: 306 VKLNRYSEELADRPE-ESHQTLVETTYRNVNDLDGEFVPPERHVKAFRYGKQHIPIDAET 364
Query: 304 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVS----------- 352
+ + EKS+K++G + + ++ + +P S T +S
Sbjct: 365 ESRLSMRFEKSMKVIGSISMDECPLWLSVGEPSVCVPQP--STKTTGLSQERAAADATAL 422
Query: 353 -ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 411
ALARA+ + +VR + +G S+ +G LTP ++ + D + LPF ED E+
Sbjct: 423 SALARALDDAKLALLVRGAFTEGTTSIHIGALTPRLT---DAGDFLLYTPLPFKEDYNEY 479
Query: 412 QFPS 415
PS
Sbjct: 480 SLPS 483
>gi|326477795|gb|EGE01805.1| Ku family DNA helicase [Trichophyton equinum CBS 127.97]
Length = 714
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 151/349 (43%), Gaps = 46/349 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
KGY YG V I+ + K + + +++++GF N R+ M + N+ IA+ N++A
Sbjct: 333 KGYEYGRTAVHITDSMENITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKA 392
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 405
+A+S++ A+ E+ A+ R V + G+ +V +L P++ PD LPFA
Sbjct: 393 IIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFA 446
Query: 406 EDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
EDVR ++FP + P+E A + V+ ++L
Sbjct: 447 EDVRCYRFPPLDRVTTMSGKVVKEHRNLPDENLLAAMEKYVENMELV------------- 493
Query: 457 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE- 515
P E + ++ H P + + L+ + L+ +S+SA++ +K+
Sbjct: 494 -QPGEEGVDQAIRWRATHPTKPLPSIPEILQNQSRQPEELMEQSKSALEQLIKASDVKKV 552
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM 575
PK+K R + +KP S D A+ E + +I I +F+
Sbjct: 553 PPKVKGRKRNRITDKPL---------SGLDVDALLQGEKR-----QRISPENAIPEFKQA 598
Query: 576 MSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ D + V ++++ M I +++S NY + VE L +R I
Sbjct: 599 LASTDDINTVKESVKQMCAIIENQIKHSLGDANYDRVVEYLGTMRDELI 647
>gi|226483439|emb|CAX74020.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 258
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 345
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 346 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 396
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|340959514|gb|EGS20695.1| hypothetical protein CTHT_0025310 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 652
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 274 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
V+DP+ + VP ++ +GY YG VP S +++ +KF +KS +LGF S+
Sbjct: 278 VKDPNAPGGKRDVPADEVERGYLYGETAVPFSESDYTVIKFDAKKSFTILGFIPFSSYQP 337
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
M + +A+ N A +A+S+ + E+ A+ R V + G Q ++ +L PN
Sbjct: 338 FLSMGEAGCVVAQRNNPEAEIALSSFIHTLYELESYAVARFVQKDGAQPQIL-LLKPNP- 395
Query: 389 EKINIPDSF---YFNVLPFAEDVREFQFPSFSK 418
I D F Y LPFAEDVR F FP K
Sbjct: 396 ---GIEDEFECLYDVPLPFAEDVRNFPFPPLDK 425
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ F T++T+N +E + GYE++ VLQ+I + ++ L+ L P + +GD
Sbjct: 49 KTWTVGVVGFNTDDTDNPQDREGLEGYENISVLQEIGSMTMSSLRRLRSLIKPSHSSSGD 108
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD---PDVGTKEDQVS 146
+ A+VV +DM I+K+ + K K+ + L+T+ P+ D DV + +Q S
Sbjct: 109 AISAVVVALDM-IEKFTKKLKYKRKIILVTNGHTPIDDDSTEDVALRLNQSS 159
>gi|294953906|ref|XP_002787962.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239903057|gb|EER19758.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 137
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 229 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP-SKVVPPEQRI 287
MKI +W Y KT + PTLKK S + VK+D Y +V+DP + +P E+R
Sbjct: 1 MKIPIWCYLKTSKVTLPTLKKESTHTSAA-------VKMDRVYYAVDDPDGEAIPAEERA 53
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSR 346
K Y+YG Q V + ++K+ +K + +LGF + I + + + AEP N
Sbjct: 54 KAYKYGTQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGESIECVAAEPNNLD 113
Query: 347 ATVAVSALARAMKEMNKVAIVRCV 370
A A+S+L +AM M V + C
Sbjct: 114 AAKALSSLIKAMDAMGVVVLYLCC 137
>gi|226483441|emb|CAX74021.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 548
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 345
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 346 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 396
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|339239001|ref|XP_003381055.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
gi|316975959|gb|EFV59329.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
Length = 887
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 26/293 (8%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGN 344
+K +R+G VVP++ + K+K EK K+LGF D + + ++ D F+ +P +
Sbjct: 534 VKAFRFGSSVVPLNKFDLNEAKYKDREKCFKVLGFFDRCMVKQWHFAGDGTHFVFGDPKS 593
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPF 404
+ A A SAL + K +KV +VR + +GVL P + + + F F +LPF
Sbjct: 594 ATACQAFSALIHSCKSNSKVILVRYAYNVASNP-KIGVLIPLLKDTY---ECFVFVILPF 649
Query: 405 AEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA-------PSGKGEILQPELTP 457
ED+ S +F ++Q EA D L+ +++ SG G I +
Sbjct: 650 EEDLIIVDQKSIGEFEKC-HVTDEQLEAVDKLIDAMNMTDLSSSASSSGDG-IFKWSKVK 707
Query: 458 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK--E 515
NP + + + ++ P L D L + +P+ LL +++A D F+++ E
Sbjct: 708 NPYYQNLFRCMTFRALQPKEKLPFLRDDLLEDVQPNVALLDNAKNAFDLMRKNFILEKVE 767
Query: 516 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP 568
N K K++ + + D + + ++++ K +VT+ KIG + P
Sbjct: 768 NAKGKRTAAEVFKNELC-------DAFPAKVASFHAIDEK-IVTM-KIGTVNP 811
>gi|285475086|dbj|BAI68043.1| piggyBac-like protein Tpb1p [Tetrahymena thermophila]
Length = 1363
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 29/315 (9%)
Query: 151 QMVAFGLRMKNIVVRASLSGEPHMRVIIE--------NDNLLNIFSKKSSAKTLFVDSTT 202
Q+ F + +K ++ +L GE M+ + E N N+ + K+ + T
Sbjct: 142 QLQEFIMHLKRDQIKITLIGEEIMKNLREDSVTDWKDNQNIEFLIKLKNQISKKNIQFLT 201
Query: 203 SLRGARKTRDISPVTI-----FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA--- 254
S + + I P I + G ++ ++ V V+ KT E+ LK YS+
Sbjct: 202 SEEALQISLRIKPKQILQRPKYNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNITEWN 261
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
PST + V+ +Y V+D P + K Y+YG Q+V +S + K
Sbjct: 262 PSTQR---QMVEQQIQYYQVDDILLENPVQDISKYYKYGNQLVKMSELFLNQINLFTLKE 318
Query: 315 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
+KL+G S+I R +M ++ A+ + R+ +++L +A E + + R V RQ
Sbjct: 319 IKLIGSVQKSSIPRQSFMSGCDILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVLRQN 378
Query: 375 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 434
+V VL P++ + + FY LP E +R++ F S + +QQ+
Sbjct: 379 SIPKLV-VLIPHLKKNC---EYFYIIELPTVESIRDYSFNSLIR------STPEQQKLMS 428
Query: 435 NLVKMLDLAPSGKGE 449
L+ LDL K +
Sbjct: 429 QLIDELDLDQDEKNQ 443
>gi|312306086|gb|ADQ73897.1| DNA-dependent protein kinase [Alternaria alternata]
Length = 660
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 124/620 (20%), Positives = 240/620 (38%), Gaps = 104/620 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPTMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLP----------QGTCAGDFLD 100
GTE+T+ L +++ +L D+ V V+ L+ + + T G +
Sbjct: 88 GTEKTD--LKDGDNTFQNCYLLADLDVPSAQDVKRLRDMVENEEEAEEILKPTKDGASMA 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R +V + +P + I + + + S + S S
Sbjct: 202 LFPISQPDHTFDRSRFYGDLVYPTSPSDPDAPIAIPSTTQVAKSGEGISLLKQLISSINS 261
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R+ +F +EL ++I V Y L K + S +
Sbjct: 262 KAAPRRA-------LFSLPMELGPDLRIGVKGY---------ILIKRQEHVKSCYVWVGG 305
Query: 264 E---VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLL 318
E + V + D ++ + + K Y++G + + E ++ F E ++++
Sbjct: 306 EKPQIAVSTTTQMANDSARAIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPVIRII 364
Query: 319 GFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF S++ + K ++ +E +T SAL + + K+ +V + R+ +
Sbjct: 365 GFKPISSVPIWANTNKSTFIYPSEADYIGSTRVFSALQHKLLKSQKMGLVWFIPRR-NAA 423
Query: 378 VVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ L P EK+N +P + LPFA+D+R+F P +P +
Sbjct: 424 PTLAALIPG-EEKVNEEGEQLMPPGLWLVPLPFADDIRQFPTP-------PERPLKTTDA 475
Query: 432 AADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 491
DN+ +++ KG I P PNP L+ FY L+ + ++ P D ++ + +
Sbjct: 476 LTDNMRLIIEQLQLPKG-IYDPSRYPNPDLQWFYRILQALALEEELPVQPEDKTIPRYKQ 534
Query: 492 PDPTLLAESQSAIDAFCGQFV------IKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 545
ID CG+++ +E ++ + R KP+ P G D
Sbjct: 535 ------------IDKRCGEYIEDYGKEFEEAYAQQQKSALAHRTKPTAKKRPGGGADGED 582
Query: 546 AQAVNSMESKPVVTVDKIGD 565
A ++ +P V + G+
Sbjct: 583 KPAAKRVKKEPKVKAEDGGE 602
>gi|403177245|ref|XP_003335793.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172789|gb|EFP91374.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 568
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
++ V E K Y+YG +V + + A++ + +++ GF + NI RH+ + +V
Sbjct: 374 AREVDRENLAKAYKYGASLVVVDKEDEAAIRQSFSECLEIRGFVNLKNIPRHHLLNNVYY 433
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
+ + ++ SA+ RAM + N+ A+ R V R + +L P V I F
Sbjct: 434 LYPIATDYGSQISFSAIVRAMNDANRAALARYVGRSVVAEPKLVILIPVVEPTIRY---F 490
Query: 398 YFNVLPFAEDVREFQFPSFSKFPV--------SWQPNEQQQEAADNLVKMLDLA 443
F +PF +D+R++ FP P+ + P ++ Q+A D LV +DL+
Sbjct: 491 LFIQVPFVDDLRQYAFPPLPTGPILGNRTVRTQYVPTDEMQDAMDELVDKMDLS 544
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 42/160 (26%)
Query: 1 MARTREALLLLLDVSPSMH-------------SVLPDVE---KLCSRLIQKKLIYG-KNH 43
MA RE + +DVSPSM + + ++E ++ + L+ G K
Sbjct: 1 MAGGRELTIYAIDVSPSMSEKRTADDPSTGATTSVTNLEYGLEVVKHQVANMLLAGLKTV 60
Query: 44 EVGVILFGTEETENELTKEVGGYEHV-----------KVLQDIKVVDGHLVQSLKHLPQG 92
GV+LFGTE T+N L GYE++ L I ++ HL S K
Sbjct: 61 HCGVVLFGTERTDNSLAS--SGYEYIWEYVRPGQPSAITLLHINKIEQHLTTSEKPF--- 115
Query: 93 TCAGDFLDAIVVGVDMLIKKYGETYKGKK---HLCLITDA 129
GD L AI+ + GET KK + L+TDA
Sbjct: 116 --KGDLLSAII----LCNHHMGETLAAKKWTRKIVLVTDA 149
>gi|167537231|ref|XP_001750285.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771275|gb|EDQ84944.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 158/731 (21%), Positives = 282/731 (38%), Gaps = 164/731 (22%)
Query: 12 LDVSPSMHSVLPDVEKLCSRL----------IQKKLIYGKNHEVGVILFGTEETENELTK 61
LDV +M P + S L I+ +++ HEV ++LFG TE++L
Sbjct: 9 LDVGHAMALPQPKLRGFGSHLEAAVAALSYSIRNRVLLTPKHEVALVLFGAATTEHDLED 68
Query: 62 E---VGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYK 118
E VG + +LQ + ++L+ + + + + ++ GE
Sbjct: 69 ESVLVGFAAGLALLQQRQ-------EALRSESKTKASKMQMRLHLFTNQTIVSTAGED-D 120
Query: 119 GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 178
G H + + LK + +G+++ + A S +
Sbjct: 121 GSDHASALINVAQDLK---------------LESFVYGIQLSDDASLADAS-----KATP 160
Query: 179 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 238
+ L + S+ + F + + L+ RK R + P F +L ++ ++I V Y
Sbjct: 161 SHTTLQDFGSRLGAQLYNFGEISDMLKLFRK-RVVKPAA-FNVNLRVA-NVEIPVSGYDI 217
Query: 239 TGEEKFPTLKKYSDKA---PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQ 295
T KK S++ PS + +V+ + Y ++ + + + R + YRYG
Sbjct: 218 VKRATVSTFKKLSNQVEIDPSDGD--SGKVQREVTYHLDDEMATEIQKDDRQRAYRYGST 275
Query: 296 VVPI-----SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRA-T 348
++P S+ E+ K + EK + L F A++I RH YM D V LFI +PG+ A
Sbjct: 276 LIPWPEEAESNPEY---KVEMEKQLTTLYFAPAASIPRHVYMGDSVKLFIPKPGSEPAVA 332
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN---------------------- 386
+A+ AL M++ VAIV V+ + + S +G+L P
Sbjct: 333 IALDALVAGMEKRRVVAIVAYVYNK-RSSPKLGMLFPRQLVADEDEDEEEEEEDGEDQHE 391
Query: 387 ----------------------VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 424
+ K + +F +LPF ED R F FPS
Sbjct: 392 GSDGHGPATGSSLGSSVGASAVLDGKSRRQRALHFVLLPFQEDARHFGFPSLKSLINELH 451
Query: 425 PNEQQ-------------------QEAADNLVKMLDL-------APS------------- 445
EQ Q A D V LDL PS
Sbjct: 452 CQEQATPATASTGASNPNDLPDTPQAAMDAFVSALDLMNVPDDQTPSTLCIIKAHVSSAH 511
Query: 446 -----------GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 494
E L+PE T NPA++ + + + H P +D + K EP P
Sbjct: 512 SCWAWLLDEDGDPVEALEPEDTFNPAIQMYNLAVPHRVLHPGDQLPAIDPEIVKFIEPHP 571
Query: 495 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGS-VSDAQAVNSME 553
L + + F +K N ++K S +R + G D DGS V DA+ +++
Sbjct: 572 YLAKKMAAMTPKLTQLFPLKIN-EVKTSGKRNANDL-FGDD----DGSAVKDAKMLDTNA 625
Query: 554 SKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 612
+ ++ V ++G P++D+E ++ ++ + ++ + ++IF ++ +G + K
Sbjct: 626 AANILAGVTQVGSSRPVEDYEELLQSQNFAN-LEAVSSQLADQIFRFVDLYMDG-DLSKF 683
Query: 613 VELLVALRKGC 623
V ++ A+R+
Sbjct: 684 VAMVEAMRRAS 694
>gi|299755185|ref|XP_001828487.2| Ku80 [Coprinopsis cinerea okayama7#130]
gi|298411107|gb|EAU93320.2| Ku80 [Coprinopsis cinerea okayama7#130]
Length = 855
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 26/275 (9%)
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
E K+ E+ + + E+ +KG++YG P ++ K + K + ++GF + N R
Sbjct: 330 EKKNKEENWERIEKEELVKGFKYGTTYAPCPDGQFP--KLQTVKGIDIMGFFPSKNFRRE 387
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
M +V +I N+ +A+S+L +AM K AI R V R + GVL P V +
Sbjct: 388 LSMGEVT-YIWPGTNAPDQLALSSLIQAMYNSQKYAIARWVLRDNSDPKM-GVLAPCVWD 445
Query: 390 KINIPDSFYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKML 440
I D + +PFA+DVR++ F S + P ++QQEA DN V +
Sbjct: 446 NI---DCLLWVRMPFADDVRKYVFGSLDTLVNKKGEVVEEHPYLPTQEQQEAMDNWVDKM 502
Query: 441 DLAPSGKGE-------ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKIT 490
+L +G + + NPA+ R H + S+ PP L
Sbjct: 503 ELGDAGDKDEEGNRMPWFDTSSSFNPAVHRIKQAIFHSAVVSDVTTDPLPPPHPELLTYF 562
Query: 491 EPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
EP +L S+ A++ F +KE PK +++
Sbjct: 563 EPPKRVLKRSRDALEECKKVFAVKEVPKRTAKSKK 597
>gi|221507343|gb|EEE32947.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 938
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 175/451 (38%), Gaps = 105/451 (23%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASL--------SGEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 PTLKK-------------YSDKAPST----DKFAT--------------HEVKVDYEYKS 273
PTL+K +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 274 VEDPS----KVVPPEQR---------------------------------IKGYRYGPQV 296
DP K+ P+ R + YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHV 542
>gi|221487550|gb|EEE25782.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 938
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 174/451 (38%), Gaps = 105/451 (23%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASL--------SGEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++
Sbjct: 217 PED-IPAVRDRLEMLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALP 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 PTLKK-------------YSDKAPST----DKFAT--------------HEVKVDYEYKS 273
PTL+K +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYYR 392
Query: 274 VEDPS----KVVPPEQR---------------------------------IKGYRYGPQV 296
DP K+ P+ R + YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHV 542
>gi|115386128|ref|XP_001209605.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190603|gb|EAU32303.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 713
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 150/654 (22%), Positives = 257/654 (39%), Gaps = 124/654 (18%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ T NEL + + ++ VL +IK L+ ++ L P T
Sbjct: 49 KTAMLGVIGLRTDGTSNELEDD-PHFSNISVLSNIK---QFLMPDIRKLDDDLKPSQTDK 104
Query: 96 GDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT-------KEDQVSTI 148
GD + AIV+ + M I + + K K+ + L+T+ + + GT KED + +
Sbjct: 105 GDAISAIVLAIQM-ISVHCKKLKYKRKIVLVTNGQGRMSNE--GTDEITKKIKEDNIELV 161
Query: 149 ARQM----VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
+G++ +N R + EN+ LL ++ ++ S
Sbjct: 162 ILGADFDDPEYGVKEENKDARKA-----------ENEELLRNLAESCDGAYGTLEQAVSE 210
Query: 205 RGARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAP 255
+ + + + FRG L+L ++I V Y +T K P+ Y SD A
Sbjct: 211 LDIPRVKVVKSMASFRGHLQLGNPEVYETAVRIPVERYYRTYVAKPPSASSYVLRSDLAA 270
Query: 256 STDKFATHEVKVDYEYK----------------SVEDPS----KV-VPPEQRIKGYRYGP 294
+ E E + V D S K+ V + KGY YG
Sbjct: 271 GEETGGQPESAAAQENEPGDGNTLTSVRNLRTYQVTDESAPGGKIDVERDDLAKGYEYGR 330
Query: 295 QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSAL 354
V I + + + ++L+GF +N R N +AT+A+S+
Sbjct: 331 TAVHIDTTDENITTLETFAGLELIGFI--ANDQR--------------ANDKATLALSSF 374
Query: 355 ARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQ 412
A+ E+ A+ R V ++ + +VV +L P++ PD LPFAEDVR ++
Sbjct: 375 IHALFELECYAVARLVTKENKPPIVV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYR 428
Query: 413 FPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG------------EIL 451
FP K VS + P++ +A V ++L + + E L
Sbjct: 429 FPPLDKVITVSGKVVTQHRNLPSDDLLDAMSKYVNSMELVNTDEDGSPGVDENSDPIEGL 488
Query: 452 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF 511
E + +P L R + ++ H + PP + L K + P L+ +S+ ++
Sbjct: 489 PIEDSFSPVLHRINAAIRSRAIHPNEPIPPPSERLTKFSHPPDELVEKSKKYLEKLMEVA 548
Query: 512 VIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQ 570
+K+ PK K R EKP S D A+ E + +T + I
Sbjct: 549 EVKKVPPKTKGRKRTREAEKPL---------SGLDVDALLHQEKRTKITPN-----NAIP 594
Query: 571 DFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
+F+ +S+ + D + A+ M I ++NS NY + +E L R I
Sbjct: 595 EFKQAVSQAENIDAIKNAVTQMTTIIEDQIKNSLGDANYDRVIEGLGVTRDELI 648
>gi|330924860|ref|XP_003300810.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
gi|311324871|gb|EFQ91096.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
Length = 659
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 221/566 (39%), Gaps = 108/566 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLQQPPKSDNKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ + +EH +L D+ V V+ L+ L G +
Sbjct: 88 GTEKTD--MGDGDNAFEHCYLLADLDVPSAQDVKRLRDLVDNEEEAEEILKPAKGGASIS 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K V +D T AR + G
Sbjct: 146 NVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + S + S S
Sbjct: 202 LFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINS 261
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V ++ K E + P +
Sbjct: 262 KATPRRA-------LFSLPLELGPDFRIGVKGYILIKRQEHIKSCYIWVGGEKPQIATSS 314
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T ++ +D S+ + + K Y++G + + E ++ F E ++++G
Sbjct: 315 TAQIS--------DDISRNIEKAEIRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIG 365
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S++ + K + ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 366 FKPLSSVPIWANTNKSIFIYPSETDYIGSTRVFSALQQKLIKSKKMGLVWFIARR-NAAP 424
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P +EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 425 TLAALIPG-AEKINGDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKT 472
Query: 433 ADNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
D L + L P G I P PNP L+ FY L+ + ++ P D ++
Sbjct: 473 TDALTDKMRLIIEQLQLPKG---IYDPSKYPNPDLQWFYRILQALALEEELPDHPDDKTI 529
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFV 512
+ + ID CG+++
Sbjct: 530 PRYKQ------------IDKRCGEYI 543
>gi|393247894|gb|EJD55401.1| SPOC domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 826
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 202/521 (38%), Gaps = 103/521 (19%)
Query: 33 IQKKLIYG-KNHEVGVILFGTE--------ETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
IQ+ + +G K + GVILFGTE ET N + + GGY+HV +I + +
Sbjct: 56 IQEMIFHGRKTDQCGVILFGTEGAPTADCCETGNIVNEAHGGYDHVIEFIEIAQPNATTL 115
Query: 84 QSLKHLPQGTC------AGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
L + + D +DAI+V ++ + + + +ITDA P++
Sbjct: 116 AKLSEISSTVIEDDDAFSADPIDAIIVAIETQEQALSTKRSWTRKMIVITDAEAPME--- 172
Query: 138 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
E+ +T+++ + +G+R ++V E V EN + + ++K +
Sbjct: 173 ---LEEWEATVSK-INDYGVR--TLIVGVDFDDE-EFGVQEENKSTIKRENEKFWKEQFV 225
Query: 198 VDSTTSLRGA-------------RKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGE 241
T + ++T+ + T+ R GD E E ++I V K T
Sbjct: 226 PKLETGIVATCAEVLQDCDKPDIKETKSAALSTVLRIGDPEGHPDEAVEITVRTAKATAV 285
Query: 242 EKFPTLKKYSDKAP----------------------------------STDKFATHEVKV 267
+ PT+KK++ + P ST+ +A
Sbjct: 286 TRPPTMKKFAKREPKDEDKDEDKDKMDVDEVKKEEEEPENDIYVELKASTEYYAKKVKDE 345
Query: 268 DYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+ E K VED + V ++ + +YG V +E + + K + L G
Sbjct: 346 EGEKKDVEDAADGELDQVDKQETVNVLKYGASWVDEPEGGFEGLATR--KGIDLYGVFPE 403
Query: 324 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
R + M +V + + R A+S+L R+M E R + R S + VL
Sbjct: 404 FKFRRDWAMGEVTYVWPDARSGRHQAALSSLVRSMSEKQVYGYCRLISRD-NSSPKMCVL 462
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-----------PVSWQPNEQQQEA 432
P E +N D F +PF+ DVR F F S ++ P+ P ++Q A
Sbjct: 463 RP---ENVNGVDCFLMVQMPFSNDVRSFGFESLTRLYSKKGTQITQHPL--LPTDEQLTA 517
Query: 433 ADNLVKMLDLAPSGKGE-----ILQPELTPNPALERFYHHL 468
+ V +DL + K E P + NPA+ R L
Sbjct: 518 MEAFVDSMDLMRAEKTEEGRVPWFDPVQSYNPAVHRVKQAL 558
>gi|118375761|ref|XP_001021064.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89302831|gb|EAS00819.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 2933
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 29/302 (9%)
Query: 164 VRASLSGEPHMRVIIE--------NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
++ +L GE M+ + E N N+ + K+ + TS + + I P
Sbjct: 1860 IKITLIGEEIMKNLREDSVTDWKDNQNIEFLIKLKNQISKKNIQFLTSEEALQISLRIKP 1919
Query: 216 VTI-----FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA---PSTDKFATHEVKV 267
I + G ++ ++ V V+ KT E+ LK YS+ PST + V+
Sbjct: 1920 KQILQRPKYNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNITEWNPSTQR---QMVEQ 1976
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+Y V+D P + K Y+YG Q+V +S + K +KL+G S+I
Sbjct: 1977 QIQYYQVDDILLENPVQDISKYYKYGNQLVKMSELFLNQINLFTLKEIKLIGSVQKSSIP 2036
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
R +M ++ A+ + R+ +++L +A E + + R V RQ +V VL P++
Sbjct: 2037 RQSFMSGCDILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVLRQNSIPKLV-VLIPHL 2095
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ + FY LP E +R++ F S + +QQ+ L+ LDL K
Sbjct: 2096 KKNC---EYFYIIELPTVESIRDYSFNSLIR------STPEQQKLMSQLIDELDLDQDEK 2146
Query: 448 GE 449
+
Sbjct: 2147 NQ 2148
>gi|189209548|ref|XP_001941106.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977199|gb|EDU43825.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 655
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 221/566 (39%), Gaps = 108/566 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 24 KDAVLFAIDVSPSMLQKPPKSDDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 83
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ + +EH +L D+ V V+ L+ + G +
Sbjct: 84 GTEKTD--VGDGDNAFEHCYLLADLDVPSAQDVKRLRDMVDNEEEAEEILKPAKGGASIS 141
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K + +D T AR + G
Sbjct: 142 NVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---IKADKDTAVTRARDLYDLGCTID 197
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + + S + S S
Sbjct: 198 LFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAISSTSKVAKSGEGISLLKQLISSINS 257
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V ++ K E + P +
Sbjct: 258 KATPRRA-------LFSLPLELGPDFRISVKGYILIKRQEHIKSCYVWVGGEKPQIATSS 310
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T ++ +D S+ + + K Y++G + + E ++ F E ++++G
Sbjct: 311 TTQIS--------DDISRNIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIG 361
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S++ + K ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 362 FKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQQKLIKSKKMGLVWFIPRRNA-AP 420
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P V EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 421 TLAALIPGV-EKINEDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKT 468
Query: 433 ADNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
D L + L P G I P PNP L+ FY L+ + ++ P D ++
Sbjct: 469 TDALTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPDHPDDKTI 525
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFV 512
+ + ID CG+++
Sbjct: 526 PRYKQ------------IDKRCGEYI 539
>gi|156371372|ref|XP_001628738.1| predicted protein [Nematostella vectensis]
gi|156215722|gb|EDO36675.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 26/177 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
++A+ ++LD+ PSM S P E K + +IQ+K+ E +ILFGTEET N
Sbjct: 4 KDAVAIILDIGPSMSSAPPGHETSLELSIKAINMIIQRKMFANAKDEFSLILFGTEETSN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF---------------LDAI 102
L +E GGYE++ V++D+ D ++ L+ + G G F +DA+
Sbjct: 64 RLNEECGGYENISVVKDLAPPD---LEMLRFIHDGITPGLFTDKNNNTAMHSSKPVIDAV 120
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
VV +D+L +K K K + L TD P + + D + + Q V G R+
Sbjct: 121 VVAMDLLREKT-RGKKCDKKIYLFTDLGSPFGNDQLDKIVDGLMELDAQFVLVGPRL 176
>gi|171690386|ref|XP_001910118.1| hypothetical protein [Podospora anserina S mat+]
gi|170945141|emb|CAP71252.1| unnamed protein product [Podospora anserina S mat+]
Length = 650
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 130/625 (20%), Positives = 244/625 (39%), Gaps = 99/625 (15%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S + K + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSASMLQPPPSSDDKKSDKDSAVVAALKCAHQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD---------- 97
GTE++ ++ ++ GY H + ++ V V+ L+ L + D
Sbjct: 89 GTEKSKFRDDTGSRSGSGYPHCYLFTELDVPGAEDVKKLRDLVEEGEDADEVLVPSKEPV 148
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + G + L +ITD ++P K+ + S R + L
Sbjct: 149 LMSNVLFCANQIFTTNAANF-GSRRLFIITDN----ENPHGNDKQAKSSAAVRAKDLYDL 203
Query: 158 RMKNIVVRASLSGEP-----------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 206
+ + S + +P + + E DN + + +S ++S S
Sbjct: 204 GVTIELFPVSRAKKPFDLSKFYDDIVYRSSVEEGDNPEGVKTSRSGDGLTLLNSLISNIN 263
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV- 265
+++T S + R EL+ + I V Y ++K P Y + A E
Sbjct: 264 SKQTPKRSYFS--RMPFELAPGLTITVKGYMPLHQQK-PARTCYVWLGGEQAQLAQSETT 320
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
KVD E ++VE + K Y++G + + + E +++K K ++++GF +N
Sbjct: 321 KVDSEARTVEK-------SEIKKAYKFGGEYIYFTPEEAKSLKELDTKVLRIIGFKPLAN 373
Query: 326 I-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
I + K +F +E G +T SAL + + KV I V R+ V+V V+
Sbjct: 374 IPMWASVKKSTFIFPSEDGYVGSTRVFSALWQKLLTSKKVGIAWYVARKNANPVMVAVIP 433
Query: 385 PNV-------SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
S +P + LPFA+D+R + + +K P ++ + ++
Sbjct: 434 SGSLNDEDEDSTAPYLPAGLWLYPLPFADDIRSVEIKTSTK------PADELTDKMREII 487
Query: 438 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
+ L L + P PNPAL+ Y L+ + +D P LDD L
Sbjct: 488 QNLQLPKA----TYNPLKYPNPALQWHYKILQAMALEED-VPDALDD-----------LT 531
Query: 498 AESQSAIDAFCGQFVIKENPKLKKSTRRFLR--------------EKPSGSDEP-NGDGS 542
ID G ++ + +L + F++ E+P + P GS
Sbjct: 532 VPKYRQIDKRVGAYMAEWKQELADKAKEFMQLRATKRELEEDDAEERPRLAKRPKTAAGS 591
Query: 543 VSDAQAVNSMESKPVVTVDKIGDLT 567
S +++ E K D + LT
Sbjct: 592 ASSGGQMSNAELKAAWENDTLKKLT 616
>gi|343426087|emb|CBQ69619.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 822
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
+ ++ G ++P+ + + + KS+++L F +AS R Y M + A+ +A
Sbjct: 374 RAWKLGASLIPVPDESFGEMDTR--KSMEILHFFNASAYRREYNMDQIWYVFADHAQIKA 431
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 407
+ +S L RAM EM+ +A+VR V + G + +GVL P V E + F+++ PF ED
Sbjct: 432 QLQISTLVRAMVEMDVLAVVRLVRKDGAEP-ELGVLKPKVEEH---NEYFFYSKAPFRED 487
Query: 408 VREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
+R F FP + + P++ Q+A D V L+L P G ++L + N
Sbjct: 488 LRRFPFPPLDRVITTDGTELRQGPTIPDDADQQAMDAFVDSLEL-PDGWFDVLD---SYN 543
Query: 459 PAL 461
PA+
Sbjct: 544 PAI 546
>gi|254585085|ref|XP_002498110.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
gi|238941004|emb|CAR29177.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
Length = 615
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 29/251 (11%)
Query: 213 ISPVTIFRGDLELSEKMKIKVWVYKKTGE-------EKFPTLKKYSD-------KAPSTD 258
+ PV +F G+L L + + + E E +P K S K
Sbjct: 213 VRPVMVFSGELRLGADVAVHTDQDSQDDEHSLTIKVEGYPATKAVSSISRKMVVKREIHG 272
Query: 259 KFATHEVKVDYEYKSVEDPSKVVP----PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEK 313
K VK EY+ D K +P P+ K YRYG V + SS E K+
Sbjct: 273 KDVYKPVKSVVEYEIQGDDEKSLPIQVSPKSIAKAYRYGADYVVLPSSLEDPPRKYASRP 332
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVW 371
+ +LGF D + RH+ + A+ G + VA+SAL A+KE N++AIVR V
Sbjct: 333 GMDILGFIDQKALPRHFLHSESRFITADTRYGGVQDVVALSALVDALKESNQLAIVRFVA 392
Query: 372 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 429
+ V VGVL P I++ D + + LPFAED R FP + +Q
Sbjct: 393 KP-TSDVQVGVLCP-----IHVEDNHTLVYCRLPFAEDQRVSDFPRLVNRTTTSGKKIEQ 446
Query: 430 QEAADNLVKML 440
++ N+ M+
Sbjct: 447 DKSQGNIDSMM 457
>gi|237830351|ref|XP_002364473.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
gi|211962137|gb|EEA97332.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
Length = 1107
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 114/539 (21%), Positives = 199/539 (36%), Gaps = 144/539 (26%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 140
LVQ L+ + D +D +VV VDM+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKL-SQNNVSFLVFSDC---QSSPAT 216
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLS--------GEPHMRVIIENDNLLNIFSKKSS 192
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 193 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 245 -------------PTLKKYSDKAPSTDK----FAT--------------HEVKVDYEYKS 273
P ++ +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 274 VEDPS----KVVPPE---------------------------------QRIKGYRYGPQV 296
DP K+ P+ QR+ YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 356
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 357 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-------------------------EKI 391
A++ ++ V + VWR G + +V +L P+V E+
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHVGGGNREKRKAWQATASLKESDDVKREEET 571
Query: 392 NIPDS--------FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
N ++ + LP AED+ E + PS +Q A + LV+ L L
Sbjct: 572 NQKEAGDEDKTYGLHLIYLPVAEDMLELRLPSLPSV------TPRQLRAVETLVESLTL 624
>gi|71023347|ref|XP_761903.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
gi|46100722|gb|EAK85955.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
Length = 808
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
+ ++ G ++P+ + KS+++L F +AS R Y M + A+ ++
Sbjct: 356 RAWKLGASLIPVPEESFG--NMDTHKSMEILHFFNASAYRREYNMDQIWYVFADHAQIKS 413
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 407
+ +S L RAM E++ +A+VR V + G + +G+L P V E + F+++ PF ED
Sbjct: 414 QLQISTLVRAMAELDVLAVVRLVRKDGAEP-ELGMLKPKVEEH---NEYFFYSKAPFRED 469
Query: 408 VREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 458
+R F FP + + P+E QEA D V L+L P ++L + N
Sbjct: 470 LRRFPFPPLDRIVTTDGTELRQGPNIPDEADQEAMDAFVDSLEL-PDPWFDVLD---SYN 525
Query: 459 PALERFYHHLELKSEHQDAA--PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 510
PA+ + + H D P P + +K + P A +Q+A C Q
Sbjct: 526 PAIHGLKTAVRQRFIHPDRNDLPGPHPELVKYLEAPSQVRTAATQAA--QMCRQ 577
>gi|296415193|ref|XP_002837276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633137|emb|CAZ81467.1| unnamed protein product [Tuber melanosporum]
Length = 645
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 218/543 (40%), Gaps = 117/543 (21%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSL 86
++Q ++I N +G++LFGTE T+ + GG YEH +L D+ + D ++ L
Sbjct: 76 VLQSRIISNPNDMMGILLFGTEATKFDTGGGGGGGVGGGYEHCYLLLDLDIPDAEGIKGL 135
Query: 87 KHL---------------PQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALC 131
K+L Q + A F V+ + ++ ++ L ++TD
Sbjct: 136 KNLIEDPEEFEPLLKPAKEQVSMANVFF-----AVNQIFTTKAANFQSRR-LFIVTDEDD 189
Query: 132 PLKDPDVGTKEDQVSTIARQMVAFGLRMK-------------------NIVVR------- 165
P D K V T AR + G+R+ +IV R
Sbjct: 190 P-HSTDKALKNSSV-TRARDLYDLGVRIDPFFIYNPAKGGFDSSKFYDDIVYRSPTDEED 247
Query: 166 ---ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF--R 220
A++SG+ +R ++ + I SK + + LF + ++ P I +
Sbjct: 248 DYHAAVSGKMRLRQMVSS-----IKSKSTPKRALFTNKL----------ELGPGLIIGVK 292
Query: 221 GDLELSEKMKIKV-WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK 279
G L + K + +VY TG EK +K + E+ +K
Sbjct: 293 GYLLFKRQEKARSHYVY--TGGEKAQIVKGVTTWL-------------------AEETAK 331
Query: 280 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LF 338
V + K Y++G + + + E +A++ E ++++GF AS + +K N ++
Sbjct: 332 VADKTEIRKAYKFGGEQILFTPEEMKAMRDFGEPVIRIIGFKPASAVRFDMNVKPANFIY 391
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-----I 393
E G +T +AL + + KV I C+ R+ +V +L P+V E + I
Sbjct: 392 PDETGYIGSTRVFAALHAKLVKDGKVGIAWCISRKNAAPQIVAIL-PSVEELGDDGVQII 450
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P F+ LPFA+DVR+ + P S + +VK L + KG I P
Sbjct: 451 PPGFFLVHLPFADDVRQNPETKLVRAPASLIDRMRA------VVKQLHMP---KGYI--P 499
Query: 454 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK---ITEPDPTLLAESQSAIDAFCGQ 510
+ NP+L+ Y L+ + +D P+D +L K I T E S ++ G
Sbjct: 500 DKYSNPSLQWHYRILQAIALDEDMPAQPVDTTLPKYKLIDRHAGTYCREWGSELEKLAGN 559
Query: 511 FVI 513
I
Sbjct: 560 LAI 562
>gi|242022021|ref|XP_002431440.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
gi|212516728|gb|EEB18702.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
Length = 569
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 40/274 (14%)
Query: 207 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT---GEEKFPT--LKKYSDKA------- 254
RK+R +P + L++ + +KI + +YKKT +KF T LK D
Sbjct: 34 TRKSRRKTP---WNSILDIGD-VKISISMYKKTDPKNSKKFDTKYLKSNDDDGDDNPTQN 89
Query: 255 --PSTDKFATHEVK---VDYEYKSVEDPSKV---VPPEQRIKGYRYGPQVVPISSAEWEA 306
PS + V+ ++Y+ +SV++ + + + I+GYRYG V+P S +
Sbjct: 90 YEPSQNSQTVPVVRDKILNYKPESVKNKELMDVEISEDDTIEGYRYGTTVIPYSRDDKTI 149
Query: 307 VKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKV 364
+++KP KS+ ++GFT+ S++ + + + + + A +A+SA+ +AMK+M V
Sbjct: 150 MEYKPGRKSLSVIGFTNMSSVPYYLLSGECSYVVTGRDKDENAEIALSAIVQAMKQMECV 209
Query: 365 AIVRCVWRQGQQSVVVGVLTPNVSE-----------KINIPDSFYFNVLPFAEDVREFQF 413
IVR V+ + + +G+L P V E + + F L F E+++ F
Sbjct: 210 GIVRKVYSD-DRGLSLGILYPFVEEIYSNDNDDDDGDVFSKECLLFVELAFQEEMKSIDF 268
Query: 414 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
PS + N Q +A D+L+ +DL + K
Sbjct: 269 PSLENLTNNITKN--QLDAIDDLIDSMDLMNAEK 300
>gi|328874182|gb|EGG22548.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 825
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 23/188 (12%)
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRAT 348
Y YG + V S E E +K + + L+GF A+ I R +K ++ LF E +T
Sbjct: 325 YYYGGEPVVFSKEEVEKIKSIDRQGMVLMGFKPANTIKRQQTIKHMSFLFPDEKTVKGST 384
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY-----FNV-- 401
V ++AL M E+++VAI + + R G +V ++ E IN DS FNV
Sbjct: 385 VTLNALIDKMIELDRVAICKFLPRAGTLPRMVALIAQ--EEIINPKDSTQIQSRGFNVFY 442
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LP+A+D+R+FQF + +K NE+Q +AA ++K + + + + NP L
Sbjct: 443 LPYADDIRQFQFNTTTK------ANEKQIDAAKKIIKTFKINYNDQSFL-------NPGL 489
Query: 462 ERFYHHLE 469
++ Y+ L+
Sbjct: 490 QKHYNSLQ 497
>gi|392594323|gb|EIW83647.1| Ku DNA-binding complex, Ku70 subunit [Coniophora puteana RWD-64-598
SS2]
Length = 648
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 217/535 (40%), Gaps = 94/535 (17%)
Query: 5 REALLLLLDVSPSMHSVLPD--VEKL-CSRLI----------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D E + SRL+ +KK++ G N VG++LF
Sbjct: 28 RDVILFCIDCSPSMQELKEDPVYEGVQTSRLLTSLEAAMQIQKKKVLVGPNDCVGILLFN 87
Query: 52 TEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHLPQGTCA-GDFLDA----- 101
T T +E G +K V Q + V+ +Q L L +G D L +
Sbjct: 88 TTRT----NEEAGYASEIKKGCFVYQQLGQVNAPKIQELIQLVEGAREDSDLLKSEYPPL 143
Query: 102 ---------IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR-- 150
+ + +I+ K + LITD DP GTK Q+ T AR
Sbjct: 144 EGKRVPIGDVFTSCNWVIRDNAPK-TATKRVFLITDN----DDPHPGTK--QLLTSARTT 196
Query: 151 --QMVAFGLRMKNIVV----RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 204
++ G++++ + R + + V+I + + + +++ + L
Sbjct: 197 LVDLIESGVQVEPFFIGTEDRPFDPTKFYSSVLINSGFDDEAEDEGTLPESISITRINDL 256
Query: 205 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ ++ IF EL+ I V Y E+K + K + D + +
Sbjct: 257 LAQMRIHEVPKRAIFNITFELANDFVIGVKGYGLVTEQKKGSYKYFVDLGDRMEVAESRT 316
Query: 265 VKVDYEYKSVEDPSKVV-------PP-----EQRIKGYRYGPQVVPISSAEW----EAVK 308
V +D E ++ + S++V PP + + G YG +VVP + E
Sbjct: 317 VYIDEEQQAEVEKSQLVYGMELGAPPANENSDDEMDGAEYGTRVVPYGQRPFYDAEEVRS 376
Query: 309 FKP---EKSVKLLGFTDASNILRHYYMKDVNLFIAEP---GNSRATVAVSALARAMKEMN 362
F+ E +KLLGF D + + +K + SR T +A+ + M E +
Sbjct: 377 FRTLELEPGLKLLGFKDRNELAFEDNVKHSTFIYPDEQKYAGSRRT--FTAMLKVMLEKD 434
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFS 417
K+ +VR + R+ V +L +EK+ N P F+ LPFA+D+R +
Sbjct: 435 KIGLVRALLRKNAAPVFCAMLPQ--AEKVEEGGWNEPGGFHLIPLPFADDIRA------A 486
Query: 418 KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 472
++ ++ + AA + L + K P+ PNPAL +H+ +L++
Sbjct: 487 PIEEGFRASDDVKNAARAWIDKLCV----KNGAYPPDTYPNPALA--FHNAQLQA 535
>gi|161789038|sp|Q7SA95.2|KU70_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=Protein mus-51
Length = 645
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 221/545 (40%), Gaps = 112/545 (20%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + GD D I
Sbjct: 89 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEP 145
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 146 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 201
Query: 148 --------IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +N A S P + + N + NI
Sbjct: 202 GVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNIN 261
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 262 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQ 311
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 312 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 351
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 352 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 411
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 412 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 466
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P
Sbjct: 467 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TP 521
Query: 480 PPLDD 484
+DD
Sbjct: 522 DAMDD 526
>gi|389742273|gb|EIM83460.1| SPOC domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 866
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
D S+ + E+ ++G++YG VP ++E ++ K + +++ F + M +V
Sbjct: 348 DLSQRIEKEELVRGFKYGSSYVPCPDGQFERLETK--RGIEICAFFKSVAFRPELAMGEV 405
Query: 336 NLFIAEPGNSRATVAVSALARAM-------------KEMNKVAIVRCVWRQGQQSVVVGV 382
A+P + VA+S++ +AM AI R + G +GV
Sbjct: 406 QYIWADPSSPNQQVAMSSIIQAMLSADKHDPKKKDKSHYPYFAIARWCNKDGSDP-KMGV 464
Query: 383 LTPNVSEKINI-------PDSFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQ 424
L P SEK++ P+SF +PFA+DVR++ F +K P +
Sbjct: 465 LQPCRSEKVDYFLWVQVRPESF----MPFADDVRKYNFAPLEYLTNKRGDRVTKHP--YI 518
Query: 425 PNEQQQEAADNLVKMLDLAPSGK----GE---ILQPELTPNPALERFYHHLELKSEHQDA 477
P E Q +A DN V LDL +G+ GE P L+ NPA+ R L A
Sbjct: 519 PTEDQLDAMDNFVDALDLMNAGEKNEAGEREPWFDPRLSYNPAIHRTKQAL-----FHSA 573
Query: 478 APPPL--------DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
P L L K E +L ++ SAI+ F +KE PK R+
Sbjct: 574 VVPDLMTHPLPPPHPELLKYFETPQRVLKKAGSAIEECKTAFNVKEVPKRAPRARK 629
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLD 100
K + GVILFGT+ T N L + G YE+V + +G + L L GD +D
Sbjct: 62 KTDQCGVILFGTDGTRNALNDKRGDYENVTEYIPVGQPNGVTMAKLAALQPSETTGDPID 121
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPD 137
++V ++ + + L+T+ P++ D
Sbjct: 122 GLIVAIEAQSVYLASKKTWTRKMVLLTNGEGPIEIQD 158
>gi|164423551|ref|XP_962503.2| hypothetical protein NCU08290 [Neurospora crassa OR74A]
gi|157070143|gb|EAA33267.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 647
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 221/545 (40%), Gaps = 112/545 (20%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 31 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 90
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + GD D I
Sbjct: 91 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEP 147
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 148 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 203
Query: 148 --------IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +N A S P + + N + NI
Sbjct: 204 GVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNIN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 264 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQ 313
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 314 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 353
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 354 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 413
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 414 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 468
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P
Sbjct: 469 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TP 523
Query: 480 PPLDD 484
+DD
Sbjct: 524 DAMDD 528
>gi|401883055|gb|EJT47291.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 795
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 164/399 (41%), Gaps = 65/399 (16%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 398
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 399 FNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDL---APSG 446
+ LPFA+D F FPS + + + P ++Q + D LVK LDL P G
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDLDSVTPEG 527
Query: 447 -----------KGEIL------QPELTPNPALERFYH---HLELKSEHQ-DAAPPPLDDS 485
GE + P + NPA+ R H L ++ + D PP +
Sbjct: 528 ATQQDDEDEDEDGEPILHSPWYDPAFSYNPAIHRTKQAILHASLTADTKADPLGPPHPEL 587
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 545
K P+ L+ +++ + IK+ ++++ R+ ++ + P +VS
Sbjct: 588 TKYFYTPE-KLVEQTEKITERLKDALDIKKVTRVQRKKRQIDIDELFDNPGPGKTETVSP 646
Query: 546 A--QAVNSMESKPVVTVDK-----------------IGDLTPIQDFEAMMSRRDCPDWVD 586
A + ++ KP D I +L P++DF+ + + D
Sbjct: 647 AKPKVAADVDKKPDFADDPDFILPPSADAKPKPGRLISNLRPLEDFKRVTASGDV---FK 703
Query: 587 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
KAI+DM + + S +P A+ L R ++
Sbjct: 704 KAIQDMGVVVEENVATSFSKQAFPDAIACLEEARSTALM 742
>gi|302845110|ref|XP_002954094.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
gi|300260593|gb|EFJ44811.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
Length = 1066
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 13/138 (9%)
Query: 287 IKGYRYGPQVVPIS--------SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
+KG+ YG Q VPI+ + + + KF+ EK LLGF +A ++ H + + ++
Sbjct: 517 VKGFSYGKQAVPIAQYTDEQAHAMDEQMRKFR-EKDFSLLGFVNAGSVPHHRLIDEPHVV 575
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
+ + +S A +A AL +KE + +VR + R+ +S +G+LTP++S ++P +
Sbjct: 576 LGDSPSSAAVIAALALV--LKERGQAGVVRFLIRK--ESPQLGLLTPHLSNSPDVPHALL 631
Query: 399 FNVLPFAEDVREFQFPSF 416
+ LPFAED+R + F +F
Sbjct: 632 LSPLPFAEDIRTYTFSTF 649
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 424 QPNEQQQEAADNLVKMLDLAPS-----GKG--------EILQPELTPNPALERFYHHLEL 470
QP+++QQ+AA LV+ LDL PS G G E L PE T NP L+R Y +
Sbjct: 726 QPDDEQQDAALALVRGLDLGPSPLLGIGGGCATREPHPEALAPEATANPVLQRVYTLVTS 785
Query: 471 KSEHQDAA-PPPLDDSLKKIT-EPD-----PTLLAESQSAIDAFCGQFVIKENPKLKKST 523
++ A P P D L ++ +P P + A + + + +P+ K
Sbjct: 786 RALDPTAQLPDPEGDPLVELVLQPHGRYWPPGAREALRRAEEKLRTRDRVPGSPRASKRA 845
Query: 524 RRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT--------------VDKIGDLTPI 569
R + G + D + + Q S + PV V ++ +L+ +
Sbjct: 846 RL----EQEGGGQGAEDAAAAAGQLSESAAAAPVTVLFDPTAAGGTAAARVGRVAELSAV 901
Query: 570 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQVY 629
+DF AMM++ D +A+ M+ + L+ S Y KA++ L ALR GC
Sbjct: 902 EDFTAMMAQGR--DSAMEAVRQMQELVQVLVGRSIGDQLYGKALKCLEALRAGCTATGRA 959
Query: 630 LSVSFFLLWF 639
+ + FL F
Sbjct: 960 GAFNRFLQGF 969
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDI 75
M LP + +L ++ KL+ NHEV V+L+GT+ T ++L + Y HV VL+ +
Sbjct: 114 MQPYLPLLHRLVFHVLNVKLLSKPNHEVAVVLYGTKGTRHKLYDASDPLSYHHVTVLRPL 173
Query: 76 KVVDGHL 82
+ + +L
Sbjct: 174 QNLGSYL 180
>gi|406700347|gb|EKD03519.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 798
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 164/399 (41%), Gaps = 65/399 (16%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 398
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 399 FNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDL---APSG 446
+ LPFA+D F FPS + + + P ++Q + D LVK LDL P G
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDLDSVTPEG 527
Query: 447 -----------KGEIL------QPELTPNPALERFYH---HLELKSEHQ-DAAPPPLDDS 485
GE + P + NPA+ R H L ++ + D PP +
Sbjct: 528 ATQQDDEDEDEDGEPILHSPWYDPAFSYNPAIHRTKQAILHASLTADTKADPLGPPHPEL 587
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 545
K P+ L+ +++ + IK+ ++++ R+ ++ + P +VS
Sbjct: 588 TKYFYTPE-KLVEQTEKITERLKDALDIKKVTRVQRKKRQIDIDELFDNPGPGKTETVSP 646
Query: 546 A--QAVNSMESKPVVTVDK-----------------IGDLTPIQDFEAMMSRRDCPDWVD 586
A + ++ KP D I +L P++DF+ + + D
Sbjct: 647 AKPKVAADVDKKPDFADDPDFILPPSADAKPKPGRLISNLRPLEDFKRVTASGDV---FK 703
Query: 587 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 625
KAI+DM + + S +P A+ L R ++
Sbjct: 704 KAIQDMGVVVEENVAASFSKQAFPDAIACLEEARSTALM 742
>gi|452984054|gb|EME83811.1| hypothetical protein MYCFIDRAFT_65414 [Pseudocercospora fijiensis
CIRAD86]
Length = 665
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 219/550 (39%), Gaps = 102/550 (18%)
Query: 5 REALLLLLDVSPSM-------HSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVIL 49
++A+L +D S SM + PD K L+Q+++I N +G++L
Sbjct: 29 KDAVLFAIDASASMLRKPSEIDAKKPDTALSSTAAALKCAYALMQQRIISNPNDMMGILL 88
Query: 50 FGTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDA---- 101
F TE++ E + Y H +L D+ V V+ L+ L + A D L A
Sbjct: 89 FNTEKSKFQEQDGESRNWQYPHCYLLMDLDVPAAADVKQLRTLVEDEEEAADILQASKDE 148
Query: 102 -----IVVGVDMLIKKYGETYKGKKHLCLITD---------------------------- 128
++ + + + ++ L L+TD
Sbjct: 149 VSMANVLFCANQVFTTKAPNFSSRR-LFLVTDNDYPHASDRDARNSAAVRAKDLYDLGVT 207
Query: 129 -ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF 187
L P+ PD G D+ R N ++ +S +P + + +D I
Sbjct: 208 IELFPISHPDRGYTFDRT------------RFYNDIIYSSTPSDPDAPMPLTSD----IK 251
Query: 188 SKKSSAKTLFVDSTT---SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKF 244
+ SSAK D T SL + +R+ T F E+ +KI V Y +++
Sbjct: 252 AASSSAK----DGITLLQSLINSVASRNAPRRTFFNVPFEIGPGLKIGVKGYIIFKKQE- 306
Query: 245 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW 304
P Y P ++K ++ V E+ ++ V + K +++G + V S E
Sbjct: 307 PKRTSYVYLPPDSEK---AQIAVGSSTMVEEETARTVEKTEIRKAFKFGGETVTFSLEEE 363
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMN 362
+K + ++++LGF S +L + D ++FI +E +T SAL + + +
Sbjct: 364 AKIKDFGDPTIRILGFKPMS-MLPMWATLDKSVFIYPSEETWVGSTRVFSALHQKLLKDQ 422
Query: 363 KVAIVRCVWRQGQQ----SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 418
K + + R+ +V+ G N ++P + VLPFA+D+RE + +
Sbjct: 423 KFGLAWYIARRNATPKLAAVIPGAEERNEGGDQHMPPGMWVKVLPFADDIREPPETNVVR 482
Query: 419 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAA 478
P + +A +V+ L L P G + P PNPAL+ F+ L+ + +D
Sbjct: 483 AP------DDVVDAMRKVVQQLQL-PKG---VYDPTKYPNPALQWFFKILQALALEEDLP 532
Query: 479 PPPLDDSLKK 488
P D +L +
Sbjct: 533 EQPEDKTLPR 542
>gi|451993350|gb|EMD85824.1| hypothetical protein COCHEDRAFT_1198766 [Cochliobolus
heterostrophus C5]
Length = 782
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 118/567 (20%), Positives = 217/567 (38%), Gaps = 110/567 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTEET+ L ++H +L D+ V V+ L+ + + G +
Sbjct: 90 GTEETD--LKDGDNTFQHCYLLADLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGASIA 147
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+K +D T AR + G
Sbjct: 148 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTID 203
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P V I + + + S + S S
Sbjct: 204 LFPISQPDHNFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINS 263
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
R+ +F LEL ++I V Y L K + S +
Sbjct: 264 KATPRRA-------LFSLPLELGPDLRIGVKGY---------ILIKRQEHVKSCYVWVGG 307
Query: 264 E---VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLL 318
E + +D +++V + K Y++G + + E ++ F + ++++
Sbjct: 308 EKPQIVTSSTAHMADDTAQIVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-QPVIRII 366
Query: 319 GFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 377
GF S++ + K ++ +E +T SAL R + + K+ +V + R+ +
Sbjct: 367 GFKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-A 425
Query: 378 VVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 431
+ L P EK N +P + LPFA+D+R QFP+ P E+ +
Sbjct: 426 PTLAALIPG-EEKTNEEGEQVMPPGLWLIPLPFADDIR--QFPT---------PPEEPLK 473
Query: 432 AADNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
D L + L P G I P PNP L+ FY L+ + ++ P D +
Sbjct: 474 TTDVLTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPDHPEDKT 530
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFV 512
+ + + ID CG+++
Sbjct: 531 IPRFKQ------------IDKRCGEYI 545
>gi|340380522|ref|XP_003388771.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 579
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 200/492 (40%), Gaps = 68/492 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKL-------CSR-LIQKKLIYGKNHEVGVILFGTEET 55
T++ L+LL+DVS M + + + C+R ++ K+I + VGV+ FGT +
Sbjct: 32 TKDCLILLIDVSLGMFVKDEETKGIPFELCIKCARSVLLNKVISSEKDLVGVVFFGTNKE 91
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC----------AGDF-LDAIVV 104
N ++HV +LQD+ + D ++ L+ + + + DF L +
Sbjct: 92 NNP-----SDFKHVYILQDLDMPDAPRIKELETMLEDEGFQTFEKDYGHSNDFSLSDVFW 146
Query: 105 GVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV 164
++ G ++ L + +P + + Q T A+ + G+ ++ + +
Sbjct: 147 TCSTMLSTSGAKSSHRRILLFTNNDHPHQSNPAL---QRQAKTKAKDLAENGIEVELMHI 203
Query: 165 RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR-KTRDISPVTIFRG-D 222
+ + + I+ +D+ S K F + T +R K R + +T G D
Sbjct: 204 GSGFNVTSFYQEIVFSDDGDGTSFPDPSEK--FEELLTRVRSKELKKRALQRITFSLGPD 261
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
LEL V VY E K P+ + DK E+K + K ED ++
Sbjct: 262 LELG------VGVYCMVRETKKPSFIRL-------DKRTNEELKTQTK-KLCEDTGSILL 307
Query: 283 PEQRIKGYRY---GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LF 338
P IK Y+ G + V E + +K + L+GF S + H+Y+K N ++
Sbjct: 308 PTD-IKYYQVLGAGGEKVIFEEEEIKELKNFGKPGFTLMGFRPKSKMKMHHYIKPANFIY 366
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI- 393
E S +T S L R VA+ + + R + V L P E I I
Sbjct: 367 PDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSPPIFVA-LVPQEEELDDSNIQIS 425
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P F+ LPF+ED+R P + P + + +Q + A ++K L Q
Sbjct: 426 PPGFHVIFLPFSEDIRSLDLP--DEMP---KASHEQIDKAKEIIKKLSFN-------FQS 473
Query: 454 ELTPNPALERFY 465
E NP +++ Y
Sbjct: 474 ESFENPVIQKHY 485
>gi|324505212|gb|ADY42245.1| X-ray repair cross-complementing protein 5 [Ascaris suum]
Length = 338
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD--YEYKSVEDPSKV 280
LEL E +K+ + ++KK E P +K K D+ EVK YE +D S+
Sbjct: 149 LELGEDIKLPLQLFKKNQE---PDMKMNFAK---IDQTTGAEVKRQTIYERPIGDDSSQS 202
Query: 281 VPP------------EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 327
P E IKGY +G +VP + + + +K E + +KLL F S IL
Sbjct: 203 ATPNANASGPKILRKEDVIKGYTFGATIVPFNEEDQKEYGWKRESRCMKLLQFAKRSEIL 262
Query: 328 RHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
HY M + P N + AVSAL RAM E + VA+VR V+ ++ L P
Sbjct: 263 EHYLMDGGVYYCLPPANDQEGATAVSALVRAMLEEDCVALVRYVYNAASLPRIM-ALFPR 321
Query: 387 VSEK 390
+S K
Sbjct: 322 ISNK 325
>gi|396479528|ref|XP_003840776.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
gi|312217349|emb|CBX97297.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
Length = 654
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 114/560 (20%), Positives = 217/560 (38%), Gaps = 96/560 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 29 KDAVLFAIDVSPTMLERPPKSEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 88
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ L ++H +L D+ V V+SL+ L + G +
Sbjct: 89 GTEQTD--LKDGDSTFQHCYLLADLDVPSAQDVKSLRDLVEDEEEAEKILKPAKEGYSIS 146
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P K + +D T AR + G
Sbjct: 147 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPAK---IKADKDTAVTRARDLYDLGCTID 202
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + + + S + S S
Sbjct: 203 LFPISQPGHTFDRSRFYDDLVYPTSPSDPDAPISLASTTKIAKSGEGISLLKQLISSINS 262
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
R+ +F LEL +I V +V K E + P +
Sbjct: 263 KATPRRA-------LFTLPLELGPDFRIGVKGYVLIKRQEHVKSCYVWVGGEKPQIATSS 315
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 319
T + +D ++ + + K Y++G + + + E ++ F + ++++G
Sbjct: 316 TSHL--------ADDSARTIEKTELQKAYKFGGEAITFTPEEITKIRQCFG-DPVIRIIG 366
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S + L K L+ +E +T +AL + + + K+ +V + R+ S
Sbjct: 367 FKPISCLPLWANVNKATFLYPSEVDYIGSTRVFAALQQKLLKSQKMGLVWFIARRNA-SP 425
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ L P+ EK+N P + LPFA+D+R+F P S P E
Sbjct: 426 ALCALIPS-EEKLNADGEQTTPPGLWLIPLPFADDLRQFPEPPDS-------PLRTTNEL 477
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
D + +++ KG + P PNP L+ FY L+ + + P D ++ + +
Sbjct: 478 TDKMRLIIEQLQLPKG-MYDPSKYPNPNLQWFYRVLQALALEDEIPEKPDDKTIPRYKQ- 535
Query: 493 DPTLLAESQSAIDAFCGQFV 512
ID CG+++
Sbjct: 536 -----------IDKRCGEYI 544
>gi|164656268|ref|XP_001729262.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
gi|159103152|gb|EDP42048.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
Length = 539
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 26/254 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
+ Y+ G +VP+ +A E +++L F AS R Y+M + IA P + RA
Sbjct: 137 RAYKLGASLVPLENAP---PALPTEAGLEILHFVSASTYRREYHMGETYYVIAHPSSKRA 193
Query: 348 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 407
VA+S+L +A A+ R V R + +L P + + D+FY +PF +D
Sbjct: 194 QVALSSLVQAAAVKGVYALCRLVTRPNADPKLC-ILAPLIESEY---DAFYLVHVPFRDD 249
Query: 408 VREFQFPSFSKFPVSWQ---------PNEQQQEAADNLV-------KMLDLAPSGKGEIL 451
V+ FP + S P +QQ D V + P G
Sbjct: 250 VKRVAFPPLDRVMTSTGASIFEHPTIPTNEQQSTMDAFVDQMDLMDMDDEGDPEG---WY 306
Query: 452 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF 511
P L+ +PA+ + ++ + + A PL SL++ + ++ A DA F
Sbjct: 307 TPTLSYHPAIHGLKNAIKWRYLYPQAPLLPLHASLQRFLHVPRRVEERARPARDACAAAF 366
Query: 512 VIKENPKLKKSTRR 525
+ P L + +R
Sbjct: 367 GVHVPPSLVPTAKR 380
>gi|336470968|gb|EGO59129.1| protein Ku70 [Neurospora tetrasperma FGSC 2508]
gi|350292044|gb|EGZ73239.1| protein Ku70 [Neurospora tetrasperma FGSC 2509]
Length = 645
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 223/545 (40%), Gaps = 112/545 (20%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQTTGDKKADKDSALTAALTCAYQIMQQRIISQPRDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI------- 102
GTE+++ G GY H +L D+ + V+ LK L + G+ D I
Sbjct: 89 GTEKSKFRDDSGSGTGYPHCYLLSDLDIPGAEDVKKLKALVED---GEDEDEIMVPSKEP 145
Query: 103 VVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------- 147
V+ +ML + G + L ++TD DP G K+ + S
Sbjct: 146 VIMSNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDL 201
Query: 148 --------IARQMVAFGLR--MKNIVVR-----ASLSGEPHMR-----VIIENDNLLNIF 187
I+R+ F L +I+ R A S P + + N + NI
Sbjct: 202 GVVIELFPISREDKKFDLSKFYDDIIYRDPAAEAGQSEGPKTSKSGDGLTLLNSLISNIN 261
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFP 245
SK++ ++ F + L +TI +G + L+ + + +VY+ GEE+
Sbjct: 262 SKQTPKRSYFSNLPFELAPG--------LTISIKGYMPLTRQTPTRSCYVYE--GEEQAQ 311
Query: 246 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 305
++ + +VD+ ++VE + KGY++G + + E
Sbjct: 312 VVQ-------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELA 351
Query: 306 AVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKV 364
+K +K+++++GF S I + K + +F +E +T SAL + + + +KV
Sbjct: 352 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKV 411
Query: 365 AIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKF 419
I V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 412 GIAWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHV 466
Query: 420 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 479
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P
Sbjct: 467 TAPPRPADELTDQMRQVIQNLQLPKA----MYDPRRYPNPSLQWHYKILQAKALDEE-TP 521
Query: 480 PPLDD 484
+DD
Sbjct: 522 DAIDD 526
>gi|46401618|dbj|BAD16622.1| MUS51 [Neurospora crassa]
Length = 645
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 121/542 (22%), Positives = 218/542 (40%), Gaps = 112/542 (20%)
Query: 8 LLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+L +DVS SM S L +++Q+++I +GV+LFGTE
Sbjct: 32 VLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLFGTE 91
Query: 54 ETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAI-------VVG 105
+++ G GY H +L D+ + V+ LK L + GD D I V+
Sbjct: 92 KSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIED---GDDEDEIMVPSKEPVIM 148
Query: 106 VDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 147
+ML + G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVV 204
Query: 148 -----IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIFSKK 190
I+R+ F L +N A S P + + N + NI SK+
Sbjct: 205 IELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNINSKQ 264
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 248
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 265 TPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQVVQ 314
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 315 -------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELK 354
Query: 309 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 355 QMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 414
Query: 368 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 415 WFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 469
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P +
Sbjct: 470 PRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TPDAM 524
Query: 483 DD 484
DD
Sbjct: 525 DD 526
>gi|121929599|sp|Q0U5F2.1|KU70_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
Length = 652
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 110/560 (19%), Positives = 218/560 (38%), Gaps = 96/560 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ L ++H +L D+ V V+ L+ L + G +
Sbjct: 88 GTEKTD--LKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 145
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+ +V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTID 201
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + +K TL +S
Sbjct: 202 LFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISS 258
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKF 260
+ R +F LEL ++I V Y K+ K + DK
Sbjct: 259 INSKATPRR----ALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSS 314
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLG 319
+H +D ++VV + K Y++G + + E ++ + ++++G
Sbjct: 315 TSH---------MADDTARVVEKTELRKAYKFGGDAITFTPDEIIKIRQAFGDPIIRIIG 365
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S + + K ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 366 FKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAPI 425
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ ++ E+ N +P + LP+A+D+R+F P+ + + +
Sbjct: 426 LSALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPAADVLKTT----DALTDK 479
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+++ L L P G + P PNP L+ FY L+ + ++ P D ++ K +
Sbjct: 480 MRIIIEQLQL-PKG---VYDPAKYPNPDLQWFYRILQAMALEEELPEKPDDKTMPKFRQ- 534
Query: 493 DPTLLAESQSAIDAFCGQFV 512
ID CG+++
Sbjct: 535 -----------IDKRCGEYI 543
>gi|451850214|gb|EMD63516.1| hypothetical protein COCSADRAFT_190760 [Cochliobolus sativus
ND90Pr]
Length = 653
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 120/560 (21%), Positives = 217/560 (38%), Gaps = 105/560 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPASAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETE---NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
GT+ET+ + +V + VK L+D+ + + LK G + ++ +
Sbjct: 90 GTKETDLKDGDTDLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGAS----IATVLFCAN 145
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---------- 157
+ + ++ L L+TD P+K +D T AR + G
Sbjct: 146 QIFTTKAPNFSSRR-LFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTVDLFPISQP 201
Query: 158 -------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 210
R + +V + +P V I + + + S + S S R+
Sbjct: 202 DHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINSKATPRRA 261
Query: 211 RDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
+F LEL +KI V Y K+ K + +K TH
Sbjct: 262 -------LFSLPLELGPDLKIGVKGYILIKRQEHVKSCYVWVGGEKPQIVTSSTTH---- 310
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASN 325
+D ++ V + K Y++G + + E ++ F E ++++GF S+
Sbjct: 311 -----MADDTARTVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-EPVIRIIGFKPLSS 364
Query: 326 I-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
+ + K ++ +E +T SAL R + + K+ +V + R+ + + L
Sbjct: 365 VPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-APTLAALI 423
Query: 385 PNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
P+ EK N +P + LPFA+D+R QFP+ P E+ + D L
Sbjct: 424 PS-EEKTNEEGEQVMPPGLWLVPLPFADDIR--QFPT---------PPEEPLKTTDALTD 471
Query: 439 MLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ L P G I P PNP L+ FY L+ + ++ P D ++ + +
Sbjct: 472 KMRLIIEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPEHPDDKTIPRFKQ- 527
Query: 493 DPTLLAESQSAIDAFCGQFV 512
ID CG+++
Sbjct: 528 -----------IDKRCGEYI 536
>gi|367022532|ref|XP_003660551.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
gi|347007818|gb|AEO55306.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
Length = 645
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 212/527 (40%), Gaps = 73/527 (13%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S + K + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSSSMLQQPVATDSKKADKDSAITAALKCAYQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEETE--NELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL------PQGTCAGDFLDA 101
GTE+++ +E G GY H +L D+ V V+SLK L P G A
Sbjct: 89 GTEKSKFRDEAGGRSGSGYPHCYLLTDLDVPTAEDVKSLKALVEEGEDPDGVLVPAKEPA 148
Query: 102 IVVGVDMLIKKYGETYK---GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ V + T G + L +ITD P + V A+ + G+
Sbjct: 149 SMANVLFCANQVFTTNAPNFGSRRLFIITDDDSPHGNDKAAKSSAAVR--AKDLYDLGVV 206
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDST-TSLRG----------A 207
++ + S G+ +D I + +A+ FVD TS G +
Sbjct: 207 IELFPI--SHGGKDFDMAKFYDD----IVYRDPAAEAGFVDRVKTSKSGDGISLLNSLIS 260
Query: 208 RKTRDISPVTIFRGDL--ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE- 264
+P + +L EL+ + I V Y ++ P Y + A E
Sbjct: 261 NINSKQTPKRAYFSNLHFELAPNLTISVKGYLPLHRQQ-PARTCYVWLGGERAQLAQSET 319
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V+VD ++V D S+V K Y++G + + E A+K K ++L+GF S
Sbjct: 320 VRVDSTTRTV-DKSEVK------KAYKFGGEYIYFKPEEAAALKNLGSKVLRLIGFKPRS 372
Query: 325 NI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV- 382
+ + K + +F +E +T SAL + + E +KV I V R+ +V +
Sbjct: 373 LLPMWASVKKSIFIFPSEEHYVGSTRVFSALWQKLLEADKVGIAWFVARENAHPSMVAII 432
Query: 383 ----LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
L SE +P + LPFA+DVR + +P ++ + +V+
Sbjct: 433 PSRALDDGSSETPYLPAGLWLYPLPFADDVRNVD------LTMPPRPADELTDRMRQIVQ 486
Query: 439 MLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
L L + + P PNP+L+ Y L+ + +D P LDD+
Sbjct: 487 NLQLPKA----MYNPSKYPNPSLQWHYKVLQAMALDED-VPDSLDDA 528
>gi|169619627|ref|XP_001803226.1| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
gi|160703865|gb|EAT79812.2| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
Length = 661
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 110/560 (19%), Positives = 218/560 (38%), Gaps = 96/560 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 37 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 96
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----------TCAGDFLD 100
GTE+T+ L ++H +L D+ V V+ L+ L + G +
Sbjct: 97 GTEKTD--LKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 154
Query: 101 AIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 157
++ + + + ++ L L+TD P+ +V +D T AR + G
Sbjct: 155 TVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTID 210
Query: 158 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
R + +V + +P + + + +K TL +S
Sbjct: 211 LFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISS 267
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKF 260
+ R +F LEL ++I V Y K+ K + DK
Sbjct: 268 INSKATPRR----ALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSS 323
Query: 261 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLG 319
+H +D ++VV + K Y++G + + E ++ + ++++G
Sbjct: 324 TSH---------MADDTARVVEKTELRKAYKFGGDAITFTPDEIIKIRQAFGDPIIRIIG 374
Query: 320 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
F S + + K ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 375 FKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAPI 434
Query: 379 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
+ ++ E+ N +P + LP+A+D+R+F P+ + + +
Sbjct: 435 LSALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPAADVLKTT----DALTDK 488
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+++ L L P G + P PNP L+ FY L+ + ++ P D ++ K +
Sbjct: 489 MRIIIEQLQL-PKG---VYDPAKYPNPDLQWFYRILQAMALEEELPEKPDDKTMPKFRQ- 543
Query: 493 DPTLLAESQSAIDAFCGQFV 512
ID CG+++
Sbjct: 544 -----------IDKRCGEYI 552
>gi|281204870|gb|EFA79065.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 775
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 106/512 (20%), Positives = 210/512 (41%), Gaps = 71/512 (13%)
Query: 5 REALLLLLDVSPSMHSVLP--------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R+ ++ L+D S +M P + K + I K+I + +G+ L+ T++ +
Sbjct: 65 RDCIIFLIDTSKAMFEPDPVTKEKPFDNAIKCLIQTITDKIITSDSDLIGLCLYNTDKNK 124
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG----------DFLDAIVVGV 106
N + +E++ VL D+ + D + L+ + +G + F DA+
Sbjct: 125 N-----LNDFENIYVLFDLDIPDPKTILLLEDILEGDYSSFGGYTENKDMVFCDALWTCS 179
Query: 107 DMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI--ARQMVAFGLRMKNIVV 164
M K + L T+ P +D D +V I A+ + G+ ++ +
Sbjct: 180 TMF--SNCNIKLSHKRIFLFTNQDQPTQDND----NQKVIAIQRAKDLSDLGIEIELFSM 233
Query: 165 RASLSGEP-------HMRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+LS P +I+++D +++ FS S LF + R K R + +
Sbjct: 234 NNALSDHPFDFSLFYQEIIILQDDQIVDQDFSSASRFSQLF---SKLKRKQFKKRSLGQL 290
Query: 217 TIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
++ G D+ + ++ V ++ PT+ + P +K + +
Sbjct: 291 PMYIGKDVVIGTQLYSLVSAATRSS----PTMLDPASNLP---------IKTLTKNICMS 337
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL-RHYYMKD 334
+ ++P + Y YG + V E ++++ + LLGF + L RH +K
Sbjct: 338 SGTTLLPSQIAYCMY-YGGEPVVFEKREVDSIRSLDRVGLTLLGFKPSKAALKRHRLVKH 396
Query: 335 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
N LF E + +T A++AL AM ++VAI + + R +V ++ E + +
Sbjct: 397 SNFLFPDEKSITGSTRALNALLDAMLSSDRVAIAKFLPRSNTSPRMVALVPQEEDEDLRM 456
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P F+ LP+A+D+R Q + Q + A ++K + P
Sbjct: 457 PRGFHIIYLPYADDIRAIQVEQSESTATT-----NQIDCAKQVIKAYHID-------YNP 504
Query: 454 ELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
NPAL++ Y +L+ + +D+ P D++
Sbjct: 505 ADFLNPALQKHYANLQALALERDSVAPTTDNT 536
>gi|308807210|ref|XP_003080916.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
gi|116059377|emb|CAL55084.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
Length = 540
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
L+GF DA I R +K + FIA G + AV+AL RA NKVAI C + + +
Sbjct: 241 LVGFIDAKRITRDLCLKKSH-FIA--GEEKGCAAVNALIRACDVENKVAI--CAYVRAKS 295
Query: 377 S-----VVVGVLTPNVS----------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
+ ++ L P+V +++ P+ F+ LPF +D+R + + S
Sbjct: 296 AGFRYVALLPQLAPHVEPGLGDADDAIARLDPPEGFHVFYLPFRDDLRHPESVAGSVKKP 355
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
+ + ++Q +AA N+V+ + L P+ TPNPAL+ Y LE+ + ++ P
Sbjct: 356 APRATKEQIDAARNVVEAIRLTG------WHPKQTPNPALQTHYRVLEMCALERNVMEPV 409
Query: 482 LDDSLKKITE----PDPTLLAE 499
DD+ + E P LLA+
Sbjct: 410 HDDTEPALDEWARVGVPALLAD 431
>gi|443899962|dbj|GAC77290.1| DNA-binding subunit of a DNA-dependent protein kinase [Pseudozyma
antarctica T-34]
Length = 837
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 109/525 (20%), Positives = 203/525 (38%), Gaps = 89/525 (16%)
Query: 25 VEKLCSRLIQKKLIYG-KNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDIKVVDG- 80
V + S I + ++ G K VG++ +G+ T N + + G + + VL + +D
Sbjct: 93 VCQFVSARIAEIILRGLKTTRVGIVTYGSPRTNNSIPGIDDYNGIDEI-VLPALPTLDTL 151
Query: 81 HLVQSLK--HLPQGTCAGDFLDAIVVGVDMLIKKYGETYKG------KKHLCLITDALCP 132
LVQ L+ H QG GD L A+V + + + K K+ + L+TDA
Sbjct: 152 DLVQCLRAVHPDQGLKHGDPLAALVDAIQLSADPHKGGIKDSQRNSWKRTVYLVTDAKAE 211
Query: 133 LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF----S 188
D+++ LR+ + +L+ +P V +N+ F
Sbjct: 212 FGYNGADAISDKIN-----QENIDLRLLGVDFDEALNPKPDDSVKCKNERFWKDFLAGIP 266
Query: 189 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFR----GDLELSEKMKIKVWVYKKTGEEKF 244
A S+ + TR T DL +I + +YK T +
Sbjct: 267 NSGFATAASAIEQASMPNVQLTRPAPTKTTLTFGDPNDLASRSAFQIAIALYKMTDPARP 326
Query: 245 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS-------------------------- 278
T K S A + + A E + D + ++ +P+
Sbjct: 327 MTQSKISKLARESAQ-AAQERQRDQDRRNHANPTSTPSVETKEEESSLIYRADLKREFFL 385
Query: 279 --------------KVVPPEQR---IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
+ +PP+ + ++ G ++P+ + ++ + K ++++ F
Sbjct: 386 LDQLAAVGHANKQPEALPPDSEANFTRAWKLGASLIPVPDEAFGSMDTR--KGMEVVHFF 443
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
AS R Y + + A+ +A + +S L RAM E++ +A+VR V + G + +G
Sbjct: 444 SASAYRREYNVDQIWYVFADHAQLKAQLQLSTLVRAMVELDVLAVVRLVRKDGAEP-ELG 502
Query: 382 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEA 432
+L P V E +++ PF ED+R F FP + + P++Q Q+
Sbjct: 503 ILKPRVEEHNEF---LFYSRAPFREDLRRFPFPPLDRIVTTDGTEVRQAPTIPDDQDQKC 559
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 477
D V ++L P ++L + NPA+ + + H DA
Sbjct: 560 MDAFVDSMEL-PDEWFDVLD---SYNPAIHGLKTAVRHRFVHPDA 600
>gi|392576409|gb|EIW69540.1| hypothetical protein TREMEDRAFT_71662 [Tremella mesenterica DSM
1558]
Length = 846
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDV 335
++V E +K +++G VP+ EA F+P K V++LGF I RH M +V
Sbjct: 380 EMVAKEDIVKAWKFGSTWVPM-----EADTFEPLNTTKGVEILGFFPREAIKRHLLMGEV 434
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP- 394
+ + +A + S+L M A+VR V + Q ++G P + N P
Sbjct: 435 RFIWPDLTSPKAQLQFSSLVEGMYLREMCAVVRWVLKD-QSDPIIGACVP----EFNYPG 489
Query: 395 -----DSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 440
D ++ LPFAED F FPS + + S P + Q + D+ V+ +
Sbjct: 490 EDKRLDYMFWCQLPFAEDEHNFWFPSLTDYKTSSGKVITEHPLIPTQDQCDLMDDFVQSM 549
Query: 441 DL 442
DL
Sbjct: 550 DL 551
>gi|403345721|gb|EJY72241.1| Ku P70 DNA helicase [Oxytricha trifallax]
Length = 817
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 113/535 (21%), Positives = 218/535 (40%), Gaps = 84/535 (15%)
Query: 1 MARTREALLLLLDVSPSMHSVLP--------DVEKL---CSRLIQKKLIYGKNHEVGVIL 49
M + R++++ L+D SMH P +V+++ C ++ K+I N ++G++L
Sbjct: 37 MKQNRDSVVFLIDCHRSMHEKNPHNGDGDPSNVQQILDACLSFMKTKIITSDNDKIGIVL 96
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-----------HLPQGTCAGDF 98
+G ++T N+L + ++ V Q + D ++ L+ +P+ T F
Sbjct: 97 YGCKQTNNQLN-----FNNIYVFQKLDSPDAQSIKQLETKMQDFTKQYGFVPKETHTPLF 151
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 158
+ + K E K + L T+ P D D G + + A + + G+
Sbjct: 152 EALWICHQEF---KVVEKQSYNKRIFLFTNEDNPGNDNDKGMAQQR----ANDLSSLGVD 204
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS----LRGARKTRDIS 214
++ + + P V N++ ++ ++ L + T S L + ++
Sbjct: 205 IELFPMPKAQQQRPVFDVKKFYANIIQFDEEEQFSEMLGIQGTQSRISELMKRIRMKEFR 264
Query: 215 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY----SDKAPSTDKFATHEVKVDYE 270
T + L+ K +I + Y K PT K + + ST +F
Sbjct: 265 KRTQGKCLFSLTPKAQIALSFYTTVMPTKKPTAAKVNAVNNKQLRSTQRFI--------- 315
Query: 271 YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI---- 326
+D V+ Q Y G + V I+ + + +KF +KL+GF S +
Sbjct: 316 ---CQDTGSVLYKNQIANHYPVGGEKVNITQDDVKQIKFFDNVGMKLMGFKPRSALKVFH 372
Query: 327 -LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV-VGVLT 384
++H Y ++ E + ++ + AL M +K+AIVR + R SVV L
Sbjct: 373 NIKHSYF----IYPDEKRITGSSQVMDALINEMISDDKIAIVRFIPRDN--SVVRFCALV 426
Query: 385 PNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA--DNL 436
P EK++ P F LP+A+D+R+ + F + E ++E + DNL
Sbjct: 427 PQ-KEKVDDEDGFQTPPGFQLIFLPYADDIRDIN----AIFDAAGYGEEIKEEESIFDNL 481
Query: 437 VKMLDLAPSGKGEILQPELTP----NPALERFYHHLELKSEHQDAAPPPLDDSLK 487
A + + + NP+L++FY L+ + ++D P ++D L+
Sbjct: 482 TNEEKHAAKLMVKNMYIDFNSRNFDNPSLQQFYAGLQALALNED-KPEQVEDHLQ 535
>gi|367003563|ref|XP_003686515.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
gi|357524816|emb|CCE64081.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
Length = 626
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI- 339
V P K +RYG V + + + + ++ + GF + +++ R Y++ + FI
Sbjct: 317 VSPNSVSKAFRYGSDYVILPAVINDQRTMNNKANIDIRGFMNETSLPR-YFLNSESKFIF 375
Query: 340 --AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI---NIP 394
+ G+ ++ AL + E K+AIVR V + + V + L P VS KI NI
Sbjct: 376 FDSRNGSKSDVYSMYALVDVLMENKKIAIVRYVQKHNGE-VEMCALYPMVS-KISDRNIV 433
Query: 395 DSFYFNVLPFAEDVREFQFPSF-SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
F N LPFAED R FP ++ S + E+ +E D + K++ S +++
Sbjct: 434 RYFVLNRLPFAEDERVSDFPKLVNRLSTSGKLIEENKEEEDKIDKLM----SDFVDLMDT 489
Query: 454 ELTPNPALERFYHHLELKSEHQDAAPPPLDDS-LKKITEPDPTL-----LAESQSAIDAF 507
+ + E +Y ++ S+ P P ++ ++K E DPTL L +S I+A+
Sbjct: 490 DDMKSIPNELYYRPIDGLSDKTSVLPLPNENKVIEKAIENDPTLSYAISLYLQKSNINAY 549
Query: 508 CGQFVI----KENPKL 519
I K+ PK+
Sbjct: 550 IHNHYIVKGDKQQPKV 565
>gi|390597184|gb|EIN06584.1| Ku DNA-binding complex Ku70 subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 663
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 124/561 (22%), Positives = 218/561 (38%), Gaps = 96/561 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLI---------QKKLIYGKNHEVGVIL 49
R+ +L +D S SM + D K C L+ +KK++ G N +G++
Sbjct: 28 RDVILFAIDCSSSMLELRDDPTYEEGEVKTCHLLVALQSAMEISKKKVLVGPNDSIGILF 87
Query: 50 FGTEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHL---------------- 89
F T N+ +G +K V Q I V+ +Q L L
Sbjct: 88 FNTTR-RNQKGDNMGQSSEIKPGAYVYQPISTVNASSIQELIRLLNEARENPSYLSETFP 146
Query: 90 --PQG--TCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDP-DVGTKEDQ 144
P G GD + + +I+ G K + LITD P D +++
Sbjct: 147 PLPDGEKMAMGD----VFTSCNWVIRD-GAPKTATKRIFLITDEDDPTPSGYDTSAAKEK 201
Query: 145 VSTIARQMVAFGLRMKNIVV---------RASLSGEPHMRVIIENDNLLNIFSKKSSA-- 193
+ T A Q L I+V R+ G+ + V+ N ++L + A
Sbjct: 202 LITSA-QTTLTDLTQAGIMVEPFFISTEERSFDIGKFYTSVL--NSHMLPTEEEDGGALP 258
Query: 194 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ + + L G + ++ ++F LEL+ +I V Y E+K + D
Sbjct: 259 EQISITRIDDLLGQMRFHEVPKRSLFSIGLELAPGFRISVKGYGLVTEQKKGKSMYFVDM 318
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAE 303
+ + VD +Y+ D S+++ Q +G G + P+ +
Sbjct: 319 GDRMEVAESRAAYVDEDYQEERDKSEILFGMELGSAAASAGQEDQGASGGGVIRPVERGK 378
Query: 304 W------EAVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSA 353
E F+ E +KLLGF D S + +K V ++ E S + S+
Sbjct: 379 RVFYTADEVRGFRTMGLEPGLKLLGFKDRSELAFEDNVKHSVFIYPDEMTYSGSKRTFSS 438
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVR 409
L ++M + +K+AIV + R+ +L P ++ N P F+ LPFA+D+R
Sbjct: 439 LLKSMLKKDKIAIVLALLRRNASPTFCAML-PQAEKQDEAGWNDPAGFHLIPLPFADDIR 497
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
+ ++ +E ++AA + V+ L L K +P+ PNP+L L+
Sbjct: 498 A------AALEEGFRASEDVKKAAQSWVEKLCL----KNGTYEPDSYPNPSLAFHNAQLQ 547
Query: 470 LKSEHQDAAPPPLDD-SLKKI 489
+ ++ P +D +L KI
Sbjct: 548 ASAFREEYDPTTFEDLTLPKI 568
>gi|398404460|ref|XP_003853696.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
gi|339473579|gb|EGP88672.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
Length = 644
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/543 (20%), Positives = 220/543 (40%), Gaps = 83/543 (15%)
Query: 4 TREALLLLLDVSPSM-------------HSVLPDVEKL-CS-RLIQKKLIYGKNHEVGVI 48
T++A+L +DVS SM + P V L C+ L+Q+++I + +G++
Sbjct: 23 TKDAVLFAIDVSESMLAKPSEADPKKPDTGLSPTVAALKCAYSLMQQRIISNPSDMMGIL 82
Query: 49 LFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSLKHLP----------QGT 93
LFGTE+++ + E G Y H +L D+ V V+ L+ L Q +
Sbjct: 83 LFGTEKSKFQEGDEKTGSGALQYPHCYLLTDLDVPAAADVKLLRDLVDDEEESAAILQAS 142
Query: 94 CAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 153
+ ++ + + + ++ L ++TD P P+ + + A+ +
Sbjct: 143 PEEVSMANVLFCANQVFTTKAPNFNSRR-LFIVTDNDYP--HPNSRDSRNSAAVRAKDLY 199
Query: 154 AFGLRMK-------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAK 194
G+ ++ N +V +S +P + D I + S+AK
Sbjct: 200 DLGVTIELFPISHPDRDYTFDRSKFYNDIVYSSTPADPDAPAPLTAD----IKAASSTAK 255
Query: 195 TLFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 253
+ SL + +R +F LE+ +I + + + + P Y
Sbjct: 256 D-GISLLQSLISSVNSRSAPRRALFSSVPLEIGPGFRIGIKGFLIL-KRQVPKRSTYVYV 313
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P ++K ++ V ED ++ V + + +++G + V + E A++ +
Sbjct: 314 PPDSEK---AQLAVGSSTLVAEDTARTVEKIEIRRAFKFGGETVSFTDEELAAIQNYGDP 370
Query: 314 SVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
++++GF D + +K+ L+ +E +T SAL + + A+ + R
Sbjct: 371 IIRIIGFKDLELLPAWAAIKESTFLYPSEDSFIGSTRVFSALHQTLLRKRYFALAWYIPR 430
Query: 373 QGQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
+ + +VG+L N S ++P + LPFA+D+R P
Sbjct: 431 RNAKPRLVGLLPGAEERNASGDQDMPPGLWVRPLPFADDIRS-------------APETS 477
Query: 429 QQEAADNLV-KMLDLAPSGK--GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
A DN+V KM + + + G + P+ PNP+L+ F+ L+ + +D P D +
Sbjct: 478 LVRAPDNVVDKMRTVLQNLQLPGAVYDPKKYPNPSLQWFFRILQALALEEDLPELPEDKT 537
Query: 486 LKK 488
L +
Sbjct: 538 LPR 540
>gi|367045694|ref|XP_003653227.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
gi|347000489|gb|AEO66891.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
Length = 645
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 222/526 (42%), Gaps = 71/526 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKL-------------CS-RLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM P +K C+ + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSKSMLQQPPATDKKKGEKDSAVAAALKCAYQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEETE--NELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDFL------- 99
GTE+++ +E G GY H + D+ V V+ LK L +G A + L
Sbjct: 89 GTEKSKFRDEAGGRSGTGYPHCYLFTDLDVPAAEDVKKLKALVEEGEDADEVLVPSNEPA 148
Query: 100 --DAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
++ + + + G + L +ITD P D K + A+ + G+
Sbjct: 149 SMANVLFCANQVFTTNAANF-GSRRLFIITDNDSP-HGKDKAAKS-SAAVRAKDLYDLGV 205
Query: 158 RMKNIVVR---ASLSGEPHMRVIIENDNLLNIFS------KKSSAKTLFVDSTTSLRGAR 208
++ + +S II D + S KS ++S S ++
Sbjct: 206 VIELFPISQGGSSFDVSKFYDDIIYRDPAAELGSPDEVKTSKSGDGLSLLNSLISNINSK 265
Query: 209 KTRDISPVTIFRGDL--ELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-V 265
+T P + +L EL+ + I V Y ++ P Y + A E +
Sbjct: 266 QT----PKRAYFSNLPFELAPGITISVKGYMPLHRQQ-PARTCYVWLGGEQAQLAQGETI 320
Query: 266 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
KVD + ++V D S+V K Y++G + + E ++K K ++++GF S+
Sbjct: 321 KVDSDTRTV-DKSEVK------KAYKFGGEYIYFKPEELASLKNLGGKVLRVIGFKPRSS 373
Query: 326 ILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL- 383
I + K + +F +E +T SAL + + + +KV + V RQ ++V ++
Sbjct: 374 IPTWASVKKSIFIFPSEEDYVGSTRVFSALWQKLLDADKVGLAWFVARQNANPIMVAIIP 433
Query: 384 TPNVSEKIN----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
+ N E+ + +P + LPFA+DVR + + + P ++ + +V+
Sbjct: 434 SRNPDEETSGTPYLPAGLWLYPLPFADDVRNVELSAPPR------PADELTDKMREIVQN 487
Query: 440 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
L L + + P PNP+L+ Y L+ + +D P LDD+
Sbjct: 488 LQLPKA----MYNPLKYPNPSLQWHYKILQAMALEED-VPEGLDDA 528
>gi|195438100|ref|XP_002066975.1| GK24271 [Drosophila willistoni]
gi|194163060|gb|EDW77961.1| GK24271 [Drosophila willistoni]
Length = 690
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 198/497 (39%), Gaps = 66/497 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLP-DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
MA +E+L+++LD+ K + +I+ K++ K + +L GTE E
Sbjct: 1 MATNKESLIVILDIRTCAQEEFKLKAVKCAAEIIKDKIVSDKKDYISFVLVGTEHNEKN- 59
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGETYK 118
V YEH+++ L++ K + + T G +LD + V ++M ++ ++K
Sbjct: 60 APNVKKYEHIQL-----CTWPLLLKFFKFVNETATDKGQWLDGLKVALEM--QEQALSFK 112
Query: 119 GKKHLCLITDALCPLKDPDVGTKE-DQVSTIARQMVAFGLRM----KNIVVRASLSGEPH 173
+ L+ L D + +E + I ++ G+ + NI + + E +
Sbjct: 113 PARQRILL------LFDFNSAKQEYEDFQEITNNLLNSGIELIVGSHNIAYKDN--PETN 164
Query: 174 MRVIIENDNLLNIFSKKSS---------AKTLFVDSTTSLRGARKT-RDISPVTIFR--- 220
+ I N S+K+S A L +L ++T R+I VT R
Sbjct: 165 LPQAIFN------LSRKASPEELDNQKYALQLVFQCNATLCNFKETLRNIFKVTNRRPWS 218
Query: 221 --GDLELSEKMKIKVWVYKKTGEEKFPTLKK-YSDKAPSTDKFATHEVKVDYEYKSVEDP 277
L + K+ + + E LKK +S+K + + +K
Sbjct: 219 WNAKLFIGSKISLNLQGIIAMKNESLVKLKKVWSEKKEWVSREERYYIK----------G 268
Query: 278 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-V 335
S++ P PE I GY G VP E + P + +GF + +I Y+ D +
Sbjct: 269 SEITPLPEDLIDGYMLGGTAVPYDDTLIEPKEPHP-AGLHFVGFVEWESIPDEYFCGDSL 327
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
+ + + GNS + + AL RA+ +V + ++ + V VL P E+ N P
Sbjct: 328 YMLVHQKGNSVSARKLDALVRALILKKRVILCWKIFSLKFNTPRVVVLIPQQPEE-NKPA 386
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL---- 451
S Y L + + FPS + N Q EA DNL+ +DL + K +
Sbjct: 387 SLYMLELSYHAQHHFWDFPSLRTAKT--ESNSDQLEAIDNLIDSMDLECTLKDTQMPRAC 444
Query: 452 -QPELTPNPALERFYHH 467
Q +L P L Y
Sbjct: 445 AQNDLLPFDGLPSIYEQ 461
>gi|405118366|gb|AFR93140.1| damaged DNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 799
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 157/403 (38%), Gaps = 73/403 (18%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
+K +++G VP+ + + + K +++LGF NI R++ + + + + +
Sbjct: 349 VKAWKFGSTWVPVPEKTFTTMDTR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 406
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-------KINIPDSFYF 399
A + SAL AM + A+ R V + G + +G P + K +I Y+
Sbjct: 407 AQIQFSALIEAMHDRKMCAVTRWVLKDGGEP-TLGACVPVIENKGADEEGKPSILPYMYW 465
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGE- 449
LPFAED R F+FPS + + P ++Q D LV +DL + E
Sbjct: 466 LKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDLDEYAREEK 525
Query: 450 -----------------------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
+P NP + R + S D PL
Sbjct: 526 RKTQENEGQDVDGQMDEQGQDVTWFKPWEAVNPVIHRIKEAVFHASLTPDLDKDPLGPPH 585
Query: 487 KKITE--PDPTLLAESQSAIDAFCGQFV-IKENPKLKKSTRRFLREKPSGSD-------- 535
++T+ P+ LAE + + + IK+ P+ +K RR +++ G D
Sbjct: 586 PELTKYFETPSELAEKVKDVTERLREVLDIKKVPEKRK--RRKTQKEELGEDEGFINEDE 643
Query: 536 ---EPNGDGSVSDAQAVNSMESKPVVTV---DK--------IGDLTPIQDFEAMMSRRDC 581
EP ++ + S+P + D+ I + +PI DF ++ D
Sbjct: 644 LFAEPTDTKFITKTEPHTQTPSQPTTSAPIPDQSKPKPGRLISNSSPIDDFNRVIQVGDV 703
Query: 582 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
KAI+DM + +E+S N+ A++ L +R +
Sbjct: 704 ---FRKAIQDMNQVVKENVESSFSRQNFAAAIDCLKLMRSTAL 743
>gi|388581870|gb|EIM22177.1| SPOC domain-like protein [Wallemia sebi CBS 633.66]
Length = 605
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 40/338 (11%)
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+S+++ IKV K G+ LK S +A + K +T +V + K V
Sbjct: 146 FNISDEISIKVKYQKAVGKATKLPLK--SLRADNNSKVSTSQVHRLGDSK--------VD 195
Query: 283 PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
I+ Y YG +VP +E V+F E + L AS R + + + A+
Sbjct: 196 SHNLIRAYHYGSILVPRPDESEGGFVEFTSEAGIDFLSTFPASTFKRDMVIGEPSFIYAD 255
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
+ + +A+S+ A+ + +A+VR R + +G+ P ++ + + +
Sbjct: 256 QSDGSSGLALSSFINALDKNGLIALVRYA-RTKDEKPYLGLCLPIINGQT---EYLQYLR 311
Query: 402 LPFAEDVREFQFPSFSKF------PVS---WQPNEQQQEAADNLVKMLDLAPS-GKGEIL 451
+PFA+ +R + FPS + P+ + P ++ A DN V +DL + K
Sbjct: 312 IPFADQMRNYSFPSLERVVTKSGEPLQNHKYLPTDKMCLAMDNFVNSMDLHDTDDKRTWF 371
Query: 452 QPELTPNPALERFYHHL--------ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSA 503
+ PA R Y + +K E QDA P LKK EP S A
Sbjct: 372 DINTSYTPAHHRIYQAVIHGASTGSIIKDELQDAHP-----ELKKYLEPPSFAQKRSIDA 426
Query: 504 IDAFCGQF-VIKENPKLKKSTRRFLREKPSGSDEPNGD 540
++ +F + K PK K RR +E + E N D
Sbjct: 427 LENCKNEFNLTKPTPKAKYH-RRHSKEDVREAQEINID 463
>gi|145349578|ref|XP_001419207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579438|gb|ABO97500.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 341
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 317 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
L+GF DA I R +K + F+A G + A L RA E NKVAI C + +
Sbjct: 35 LVGFVDAKTITRDLCLKKSH-FVA--GEEKGCAAFQGLLRACVEENKVAI--CALSRSTR 89
Query: 377 SVVVGV-LTPNVS-------------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
S + V L P ++ ++ P+ F+ LPF +D R + S+
Sbjct: 90 SALRYVALLPQLAPSADEIAAADDAVSRLEPPEGFHVFYLPFRDDTRHPERAVASEKAPL 149
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
+ NE Q AA +++ + L P+ TPNPAL+ Y LE+ + ++ P
Sbjct: 150 PRANEAQITAARSVIDAIRLTQ------WHPKQTPNPALQTHYRVLEMCALERNVMEPVH 203
Query: 483 DDSLKKITEPD----PTLLAESQSAIDAFC 508
DD+ + E P LLA DA C
Sbjct: 204 DDTEPALDEWQRAGIPALLA----GFDAEC 229
>gi|195115270|ref|XP_002002187.1| GI17244 [Drosophila mojavensis]
gi|193912762|gb|EDW11629.1| GI17244 [Drosophila mojavensis]
Length = 700
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 133/623 (21%), Positives = 248/623 (39%), Gaps = 91/623 (14%)
Query: 1 MARTREALLLLLDV--SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
MA +E L+++LDV + L V K + +I+ K++ K V +L G EE+ NE
Sbjct: 1 MASNKECLIIVLDVRNCAAEEFKLKSV-KCVAEIIKDKIVSDKKDYVSFVLVGCEESNNE 59
Query: 59 L-------TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDAIVVGVDMLI 110
L + V YE+ ++ L++ K + C G++LD + V + ML
Sbjct: 60 LYEADNSVCQNVLQYENTQL-----CTWQLLLRFFKFVNATACDEGEWLDGLDVAIAML- 113
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKE----DQV-STIARQMVAFGLRMKNIV-V 164
+ K + L+ L D + T+ D++ S I + + + NI +
Sbjct: 114 -HSAQPLKCARQRILL------LYDFNFMTQRHDDYDKICSKILHENIELIVGSHNIAYI 166
Query: 165 RASLSGEPHMRV-------IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ + +P I E +N + S+ + +L K + P
Sbjct: 167 DNAETNQPQAIFQFTRKSNIHELENQKHALQLVSNCNAVLCSFKETLASVFKVSNRRP-W 225
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
++ L + ++ I + E LKK + + V+ E + V
Sbjct: 226 VWNAKLHIGSQISISLQGIIAMKNESHIKLKKV---------WGEDDELVEREERFVIKG 276
Query: 278 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS--VKLLGFTDASNILRHYYMKD 334
++V P PE I GY G VP V+ P + + +GF S+I Y+ D
Sbjct: 277 TEVTPLPEDLIDGYMLGGTPVPYDET---LVELPPAHAPGLHFVGFVKHSSIPDAYFCGD 333
Query: 335 -VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
+ + + + GN+ + + AL RA+ V + ++ + + VL P S K +
Sbjct: 334 SLYMLVHQKGNTSSAQKLDALVRALIAQKCVILCWKIFSVKFNTPRIVVLIPQES-KDDS 392
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P + Y L + + + FPS + N+ Q +A DNL+ +DL + K + QP
Sbjct: 393 PATLYMQELSYHAQHQFWDFPSLRTEKT--ECNKDQLKAVDNLIDSMDLECTLK-DTQQP 449
Query: 454 ------ELTPNPALERFYHH-----LELKSEHQDAAPPPLDDSLKKIT-------EPDPT 495
+L P L + LE K + D+ LK+ P+P
Sbjct: 450 RQRRKNDLLPFDGLPSIFEQNVMDVLEYKVISKKKDEELFDEMLKQKNFVDVFWRVPEP- 508
Query: 496 LLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK 555
+ +S+ A A F ++ + +L + + E N ++ ES+
Sbjct: 509 IEEKSKQAAAALKKLFPLEH-------SYAWLEKLKAKEQEQNPAPAI-------KQESE 554
Query: 556 PVVTVDKIGDLTPIQDFEAMMSR 578
+T++ +G +TP+QD++ ++ +
Sbjct: 555 DTITINSVGLMTPVQDYKQLLQK 577
>gi|219121746|ref|XP_002181221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407207|gb|EEC47144.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 517
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 32/333 (9%)
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLK-DPD-VGTKE-----DQVSTIARQMVAF 155
VVG D L+ E L L T+A P K +PD V TK D S+ F
Sbjct: 176 VVGFDFLLSASYEQPMEASSLSLNTNAPKPAKTEPDTVSTKRLKKSTDYDSSETEDEDGF 235
Query: 156 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ + + G+ + + LL+ ++K+ + V + + K R +
Sbjct: 236 ATCTQKTELDRNDPGQILYSTKEDREQLLSSLAEKTGGDVMAVSTLRQILQVDKGRSLKK 295
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY-------SD--KAPSTDKFATHEVK 266
T + +L ++ + + V K +E +KK SD DK +V+
Sbjct: 296 ATKRKIELRIAPGIVLPVRSLKMLSKETTLGMKKTAVIGTNKSDTYSTAGNDKAEMDDVR 355
Query: 267 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE--KSVKLLGFTDAS 324
Y + + VV P++ IK RYG ++P+SS ++E +K +++LG+T +
Sbjct: 356 NVYMFVDPDHKDDVVEPQETIKAVRYGSDLIPMSSYDYEGLKSSANYIPYLEILGYTSRA 415
Query: 325 NILRHYYMKDVNLFIAEP------GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 378
I + I P + +A A+SALA++++++++VAI + +G +
Sbjct: 416 AI-------PLVALIGPPYALSGSDSRKACAAISALAKSLEQLDRVAICTYMKTKGGDPI 468
Query: 379 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 411
+ G+ P + F LPFA D+++
Sbjct: 469 LGGLF-PLSEPQFKHAARLMFLQLPFAGDMKQL 500
>gi|353231766|emb|CCD79121.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 608
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 265 VKVDYEYKSVEDP-------SKVVPPEQRIKGYRYGPQVVPISSAEW-EAVKFKPEKSVK 316
V+V +Y + DP ++P ++G + + + E EAV+ +
Sbjct: 284 VRVHRDYYKIIDPYGSFDPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLH 343
Query: 317 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
LLGF + R+YY++ + ++ E + + +AL +AI V R+GQ
Sbjct: 344 LLGFISQKFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQ 403
Query: 376 QSVVVGVLTPNVSEKIN----------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+V +L +E+ N IP F+ LP+A+D R+ + P+ +
Sbjct: 404 FPRLVALLPQ--AEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIEIPT------NEIA 455
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
NE Q + A +++ L + P G+I NP L+RFY LE + +++ +D +
Sbjct: 456 NESQVDIAKAMIRKL-MVPFTPGQI------ENPTLQRFYSLLEALALNRETQSEVVDHT 508
Query: 486 LKKI 489
L K+
Sbjct: 509 LPKL 512
>gi|256079194|ref|XP_002575874.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 1269
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/537 (20%), Positives = 216/537 (40%), Gaps = 78/537 (14%)
Query: 5 REALLLLLDVSPSM---HSVLP----------------DVEKLCSRLIQK-KLIYGKNHE 44
R ++ L+D +P+M H D+ LC + Q+ K ++
Sbjct: 663 RSGVIFLIDCTPTMLGLHGSFDLNSSNAVDSSSVKSGFDLSLLCCQTFQQNKALHSPFDM 722
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ----------GTC 94
+G++L T E+ + +++ VLQ + + D + ++ L Q GT
Sbjct: 723 IGLVLMRTSESSVDT-------KNIMVLQPLGLADSTRILEIEKLRQLKPDELEKRYGTI 775
Query: 95 AGD------FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+A+ + I +T+ G KH+ L+TD P+ + + K ++ +
Sbjct: 776 VNQPNITFPLHEALWACQNQFITS-SKTF-GIKHIFLLTDDPDPV-NKNANLKRRAIAKM 832
Query: 149 ARQMVAFGLRMKNIVVRASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLFVDSTTSLRG 206
A M +G+ ++ I ++ + + + E D L+ KSS + L
Sbjct: 833 A-DMKQYGIELEVIPIKQQNTKFDYKLLYDELLEDELMYPDVDKSSYHPDPTERLDELLS 891
Query: 207 ARKTRDISPVTIFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 264
+ ++ + R L S+ + + + VY + P+ S T +
Sbjct: 892 RINSHELRRSRLARLPFHLGSSKNLTLGISVYCLVYPTRLPSPIWLSSSDNKTVRVHRDY 951
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW-EAVKFKPEKSVKLLGFTDA 323
K+ Y S + ++P ++G + + + E EAV+ + LLGF
Sbjct: 952 YKIIDPYGSFDPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLHLLGFISQ 1011
Query: 324 SNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
+ R+YY++ + ++ E + + +AL +AI V R+GQ +V +
Sbjct: 1012 KFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQFPRLVAL 1071
Query: 383 LTPNVSEKIN----------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 432
L +E+ N IP F+ LP+A+D R+ + P+ + NE Q +
Sbjct: 1072 LPQ--AEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIEIPT------NEIANESQVDI 1123
Query: 433 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 489
A +++ L + P G+I NP L+RFY LE + +++ +D +L K+
Sbjct: 1124 AKAMIRKL-MVPFTPGQI------ENPTLQRFYSLLEALALNRETQSEVVDHTLPKL 1173
>gi|353244109|emb|CCA75559.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Piriformospora indica DSM 11827]
Length = 858
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
+P V E Y+YG +P+ A++E ++ K + +LGF R + M +V
Sbjct: 360 EPVVTVNDENTQIAYKYGSTYIPVDKADFETLQTV--KGLDILGFIPQHKFRREWSMGEV 417
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 395
+ + + +A S++ RAM + AI+R V + VG+ P + EK D
Sbjct: 418 YYIWGDDQSGKMQLAFSSIVRAMAQEELCAIIRMV-TLNNSAPKVGIAVPRILEKA---D 473
Query: 396 SFYFNVLPFAEDVREFQFPSFSKF 419
+ +PFAED R F F S ++
Sbjct: 474 CLLW--MPFAEDNRNFAFQSLTRL 495
>gi|336270558|ref|XP_003350038.1| hypothetical protein SMAC_00927 [Sordaria macrospora k-hell]
gi|111120025|emb|CAJ41424.1| ATP-dependent DNA helicase II, 70 kDa subunit [Sordaria macrospora]
gi|380095429|emb|CCC06902.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 646
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 213/524 (40%), Gaps = 105/524 (20%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM S L K +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIEVSKSMLKPPAATGDKKADKDSALTAALKCAYQIMQQRIIAQPRDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFL----DAIVVG 105
GTE+++ G GY H +L D+ V V+ L+ L + D + V+
Sbjct: 89 GTEKSKFRDDSGNGTGYPHCYLLSDLDVPGAEDVKKLRALVEDDEDEDEIMVPSKEPVIM 148
Query: 106 VDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 147
+ML + G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGIV 204
Query: 148 -----IARQMVAFGLR--MKNIVVR------ASLSGEPHMR----VIIENDNLLNIFSKK 190
I+R+ F L +I+ R L G + + + N + NI SK+
Sbjct: 205 IELFPISREGKKFDLSKFYDDIIYRDPAAEVGELGGPKTSKAGDGLTLLNSLISNINSKQ 264
Query: 191 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 248
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 265 TPKRSYFSNLPFELAPG--------LTISVKGYIPLNRQTPSRSCYVYE--GEEQAQVVQ 314
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+ +VD+ ++VE E R KGY++G + + E +K
Sbjct: 315 -------------SETAQVDFAARTVEKT------ELR-KGYKFGGEHICFKPEELAELK 354
Query: 309 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 355 QMGKKTLRIIGFKKRSKIPSWASVKKSLFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 414
Query: 368 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 415 WFVARENAHPVMVAIFPSGNPDDEESNTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 469
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYH 466
+P ++ + +++ L L + + P PNP+L+ Y
Sbjct: 470 ARPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYR 509
>gi|124518454|gb|ABN13872.1| Ku seventy [Aspergillus niger]
gi|134082330|emb|CAK42345.1| unnamed protein product [Aspergillus niger]
Length = 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 227/576 (39%), Gaps = 109/576 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDA----- 101
GT+ + E+E ++ Y + + D+ V H V+ L+ L GD +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDE--GDSREVLSPAK 145
Query: 102 -------IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
++ + + + ++ L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRR-LFIITDNDNPHGDDK--TLRSAATVRAKDLYD 202
Query: 155 FGLRM------------KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT 202
G+ + KN SL +P +++D SK ++A +
Sbjct: 203 LGVTIELFPISRPEHEFKNSKFYDSLPSDPEAPAYLQSD------SKAATATGDGISLLN 256
Query: 203 SLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
+L + +R + T F LEL +I V Y L++ +AP+ + F
Sbjct: 257 TLLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPARNSFI 305
Query: 262 THE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
V S +D + V + K Y++G V S E +A++ E ++
Sbjct: 306 WLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIR 365
Query: 317 LLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
++GF + + ++H Y ++ +E ++ SAL + + K+A+V +
Sbjct: 366 VIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFIA 421
Query: 372 RQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
R+G V+ ++ EK++ P + LPFA+D+R+ + + P
Sbjct: 422 RKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP----- 474
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
E + +V+ L L P G + +P PNP+L+ Y L+ + +D P D +
Sbjct: 475 -ESLIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQWHYRILQALALDEDLPEKPEDKT 529
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
+ K + ID G +V+ +L+K
Sbjct: 530 IPKYRQ------------IDKRAGDYVLSWADELEK 553
>gi|401411521|ref|XP_003885208.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
gi|325119627|emb|CBZ55180.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
Length = 1064
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 190/536 (35%), Gaps = 136/536 (25%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG-----------GYEHVKVLQDIKVVDGH 81
+Q+ +VGV+ FG+ T N L G GY HV V +
Sbjct: 81 VQRLAATSAKVDVGVVCFGSCRTNNPLAIPGGQPGDEGDEEDDGYRHVDVAVQPESASWK 140
Query: 82 LVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYG-ETYKGKKHLCLITDALCPLKDPDVGT 140
LV++++ + D +DA+VV VD + K YG + + + +D P+
Sbjct: 141 LVKAVEEIENSDHRSDAIDAVVVAVDTVEKTYGPKLAQNDVSFLMFSDCQSRPAAPE--- 197
Query: 141 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ + ++ + G+RM IVV SL P + +L + S
Sbjct: 198 ---DIPAVQERLQSLGIRMHVIVVDGSLPEYPPILSPPSTASLDRLPSPVHPTLPSLARL 254
Query: 201 TTSLRGARK-------TRDISP----VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 249
++L R SP T R +LE+S+ I V+V+ +T +E PT +K
Sbjct: 255 ASTLIPLRSFLASPFLRAFFSPPKRLSTKCRVNLEISKAFVIPVYVFVRTRKESLPTFRK 314
Query: 250 Y----------------------SDKAPSTDKF-------------ATHEVKVDYEYKSV 274
D A ++D+ +VKVD Y
Sbjct: 315 RVFVGSSCSQSATRRRTESSLPRGDAAVASDEVLRRGEKLTENEEDGWRDVKVDRFYYRA 374
Query: 275 EDPSKV---------------------------VPPE-------QRIKGYRYGPQVVPIS 300
DP + P R+ YRYG Q+V +S
Sbjct: 375 NDPDRTPVKYGEQDKKRPDGISILGRDESEDEGTPKRDAAGGYVHRLYAYRYGKQLVAVS 434
Query: 301 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 360
+ E +A K + E + +LG T I R + + N + VA+ +L A++
Sbjct: 435 AVEQQAFKEQTEAGLVVLGVTRRDGIQRWWNLGPAEYVTCALNNRPSLVALRSLVLALER 494
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVS---------------------EKINIPD---- 395
++ V + VWR G + +V +L P+V EK + D
Sbjct: 495 LDSVLLCSFVWRAGYPAKLVALL-PHVGGREAGRRPLSDSWQASEAIKREKEELDDDTRE 553
Query: 396 -----SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+ LP AED+ E + PS S Q +A + L+ L L P G
Sbjct: 554 DDWTYGLHLIYLPVAEDMLELRLPSLPSVTPS------QLQAVETLIDSLTL-PDG 602
>gi|449303204|gb|EMC99212.1| hypothetical protein BAUCODRAFT_395450 [Baudoinia compniacensis
UAMH 10762]
Length = 674
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 123/585 (21%), Positives = 226/585 (38%), Gaps = 92/585 (15%)
Query: 5 REALLLLLDVSPSM-------------HSVLPDVEKL-CS-RLIQKKLIYGKNHEVGVIL 49
++A+L +DVS SM ++ P + L C+ L+Q+++I N +G++L
Sbjct: 31 KDAVLFAIDVSESMLRKPAEGDPKKPDTTLSPTLAALKCAYALMQQRIISNPNDMMGILL 90
Query: 50 FGTEETENELTKEVG----GYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDFLDA--- 101
FGTE+++ + E G Y H +L D+ V V+ L+ L + + D L A
Sbjct: 91 FGTEKSKFQDGDESGRGGLQYPHCYLLTDLDVPAAADVKQLRSLVEDEAESSDLLVASKE 150
Query: 102 ------IVVGVDMLIKKYGETYKGKKHLCLITDALCP-----------------LKDPDV 138
++ + + + ++ L L+TD P L D V
Sbjct: 151 EVSMANVLFCANQIFTTKAPNFSSRR-LFLVTDNDYPHASNRDARNSAAVRAKDLYDLGV 209
Query: 139 GTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+ +S R + N +V +S+ +P + D I + S+AK
Sbjct: 210 TIELFPISHPNRGYTFDRSKFYNDIVYSSMPSDPDAPAPLTAD----IKAASSTAKDGIS 265
Query: 199 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
+ L + + E+ KI V Y ++ P Y P TD
Sbjct: 266 LLQSLLSSVQSRSAMRRAQFSNMPFEIGPGFKISVKGYILVRRQE-PKRTAYIYLPPDTD 324
Query: 259 K---FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
K ++H V +D ++ V + + +++G + + S E +K + +
Sbjct: 325 KPQIVSSHGTLV------ADDTARTVEKAEVRRAFKFGGETISFSEEELAKIKHFGDPVL 378
Query: 316 KLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+++GF + ++K N FI +E +T SAL + + + ++ I + R+
Sbjct: 379 RIIGFKPLDMLPIWAHVKQ-NYFIYPSEEDYVGSTRVFSALHQKLLKDQRIGIAWFIPRR 437
Query: 374 GQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 428
+V L P + +P + LPFA+D+RE K P +
Sbjct: 438 NSTPALVA-LIPGREHRSEEGEQTLPPGIWIKHLPFADDIREPPQTEVVKAP------DP 490
Query: 429 QQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
+A +++ L L + I P PNPAL+ FY L+ + +D D +L +
Sbjct: 491 LIDAMRVVIQQLQLPKA----IYDPRKYPNPALQWFYRILQALALEEDLPEQAEDKTLPR 546
Query: 489 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSG 533
+ I GQ+V+ L++ R + RE G
Sbjct: 547 WKQ------------IHKRAGQYVVDWGRLLEEHYRLWQRENDRG 579
>gi|255713294|ref|XP_002552929.1| KLTH0D04774p [Lachancea thermotolerans]
gi|238934309|emb|CAR22491.1| KLTH0D04774p [Lachancea thermotolerans CBS 6340]
Length = 602
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 33/261 (12%)
Query: 213 ISPVTIFRGDLELS-------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ PV IF+G+L L + + +KV Y T + +L +
Sbjct: 206 VKPVRIFQGELRLGAPISDEDVTGPSYDSITVKVEGYPAT--KAVSSLNRRVVAKSEDGT 263
Query: 260 FATHEVKVDYEYKSVEDPS------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
F VK EY++++D V E K YRYG V + A +K +
Sbjct: 264 FGP--VKSVIEYEAIDDGEDSEGGVASVSKEYVTKAYRYGSDYVVLPQAIESERTYKTKP 321
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRAT-VAVSALARAMKEMNKVAIVRCVW 371
+ L GF +I RH+ + I A +RA V+ SAL +M ++ K AI R V
Sbjct: 322 GLDLRGFVGNESIPRHFLSSESTFIIPATKDGTRADFVSFSALVDSMIKLRKFAIARYVQ 381
Query: 372 R---QGQQSVVVGVLTPNVSEKINIPDSF----YFNVLPFAEDVREFQFPSFSKFPVSWQ 424
+ + Q ++ +L P ++ +++ N LPFAED R +P ++ S
Sbjct: 382 KLNGEVQMCLLCPILIPKKRKEPGDDETYTRALVLNRLPFAEDERCSDYPRLAQAAASSD 441
Query: 425 PNEQQQEA-ADNLVKMLDLAP 444
+ +A L+ +DL P
Sbjct: 442 AETAEIDALMGELIDTMDLGP 462
>gi|156849195|ref|XP_001647478.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
gi|156118164|gb|EDO19620.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
Length = 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S+ + +K + + GF D + R+Y + + A+ G
Sbjct: 321 KAYRYGTDYVVLPSSISDERFYKTSPGIDIRGFLDKDLLPRYYLSSESRVIFADTKMGTL 380
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS------FYF 399
V++ A M E +KVAIVR V + + V + L P++ ++ NI D F
Sbjct: 381 ADVVSMGAFVDVMIENDKVAIVRYVQKPNSE-VEMCALIPHIFKQ-NIGDESEDLRVFIL 438
Query: 400 NVLPFAEDVREFQFPSFSK 418
N LPFAED R FP ++
Sbjct: 439 NRLPFAEDERVSDFPKLTE 457
>gi|347832489|emb|CCD48186.1| BcKU70, protein involved in DNA reparation [Botryotinia fuckeliana]
Length = 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 120/608 (19%), Positives = 246/608 (40%), Gaps = 133/608 (21%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF---------- 98
GTEET+ ++ + Y H +L D+ + V++LK + + +
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPTEETLD 148
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 156
++ ++ + + + G + L +ITD DP G K + + A+ + G
Sbjct: 149 MNNLLFCANQIFTTRAPNF-GSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 157 LRMK------------------NIVVRASLSGEPHM-----------RVIIENDNLLNIF 187
+ ++ +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 308 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 367 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 421 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 477
P E DN+ V+ L L P + + P PNP+L+ Y L+ + +D
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQYD---PRNYPNPSLQWHYRILQAMALEEDV 522
Query: 478 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS----- 532
P D ++ K + I+ CG ++ + L ++ REK +
Sbjct: 523 PENPEDKTVPKYRQ------------IEKRCGAYINEWGRTLAFEYEKWCREKGNALKRE 570
Query: 533 ---GSDEP 537
G DEP
Sbjct: 571 RDEGIDEP 578
>gi|154289722|ref|XP_001545469.1| hypothetical protein BC1G_16015 [Botryotinia fuckeliana B05.10]
Length = 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 120/608 (19%), Positives = 245/608 (40%), Gaps = 133/608 (21%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDF---------- 98
GTEET+ ++ + Y H +L D+ + V++LK + + +
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPTEETLD 148
Query: 99 LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 156
++ ++ + + + G + L +ITD DP G K + + A+ + G
Sbjct: 149 MNNLLFCANQIFTTRAPNF-GSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 157 LRMK------------------NIVVRASLSGEPHM-----------RVIIENDNLLNIF 187
+ ++ +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 188 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 247
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 308 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 367 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 421 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 477
P E DN+ V+ L L P + P PNP+L+ Y L+ + +D
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQ---YDPRNYPNPSLQWHYRILQAMALEEDV 522
Query: 478 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS----- 532
P D ++ K + I+ CG ++ + L ++ REK +
Sbjct: 523 PENPEDKTVPKYRQ------------IEKRCGAYINEWGRTLAFEYEKWCREKGNALKRE 570
Query: 533 ---GSDEP 537
G DEP
Sbjct: 571 RDEGIDEP 578
>gi|363749599|ref|XP_003645017.1| hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888650|gb|AET38200.1| Hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
Length = 611
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 137/346 (39%), Gaps = 54/346 (15%)
Query: 211 RDISPVTIFRGDLELSEKMK-------------IKVWVY---KKTGEEKFPTLKKYSDKA 254
R I PV +F+G L L K I V Y K ++K D +
Sbjct: 200 RPIKPVRVFQGQLRLGADFKNLESCQDDPYCMCINVEGYPATKAVTSLSRKQVQKTEDGS 259
Query: 255 ----PSTDKFATHE--VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
S ++ HE K D EY+++ V + +K +RYG + +
Sbjct: 260 YIPLKSVVEYEIHEPSEKEDQEYEAI-----TVSKDHIVKAFRYGADYISLPDVLASERI 314
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 366
++ + + GF D N+ R Y + IA+ G+ +A SAL AM K+AI
Sbjct: 315 YQTTPGLDIRGFIDLFNVPRQYLCGESVYIIADTREGSEADFMAFSALVDAMITSKKLAI 374
Query: 367 VRCVWRQGQ--QSVVVGVLTPNVSEKINIPD--------SFYFNVLPFAEDVREFQFPSF 416
R V + Q VV+ L + K D + LPFAED R F F
Sbjct: 375 ARYVQKNNSEVQMVVLCPLLVGSNLKKRTSDNPEAEPKRALVLCRLPFAEDERACDFLPF 434
Query: 417 S-KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQ 475
+ K+P +E D LV ++D+ + N +++ F ++
Sbjct: 435 TNKYP----KDEDMDAKMDQLVDLMDMDSDATEHHSETSWCSNSSIQPFTSFMK-----D 485
Query: 476 DAAPPPLDDSLKKITE----PDPTLLAESQSAIDAFCGQFVI-KEN 516
+ P P D +L+++++ P + + Q +D F +F++ +EN
Sbjct: 486 SSLPLPSDPNLQEVSDPICIPAIAIHRQKQVLLDYFHQRFILGQEN 531
>gi|405970038|gb|EKC34975.1| ATP-dependent DNA helicase 2 subunit 1 [Crassostrea gigas]
Length = 607
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 114/537 (21%), Positives = 218/537 (40%), Gaps = 78/537 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRL----IQKKLIYGKNHEVGVILFGTE 53
R+ L+ L+D S SM + +LC R +Q K+I VG++ +GTE
Sbjct: 28 RDGLIFLIDCSKSMFDKDDEDNEEEESHFQLCLRCAQTTLQNKIISSDKDLVGIVFYGTE 87
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG-----------TCAGDFLDAI 102
+++N ++HV V Q ++ + L++L A DA+
Sbjct: 88 KSQNP-----SDFKHVYVYQGLEQPGAERILELENLIDDGMKSFEKDFGHNTAYSLNDAL 142
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKE--DQVSTIARQMVAFGLRMK 160
+M + G K + L T+ +P G + Q T A + G+ ++
Sbjct: 143 WTCQNMFANSSQKV--GFKRIMLFTNN----DNPHAGAPQLQRQAKTKAGDLKETGIELE 196
Query: 161 NIVVRA---SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
+ ++ S + + ++ + + + F++ ++ + T +R ++D
Sbjct: 197 LMHLQKPNESFEVDKFYKDLLYSAD--DDFTELANPAERLEELLTRVR----SKDHKKRA 250
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 277
+ R L L +++ V VY PT K S + ++ TH + +
Sbjct: 251 LRRIPLTLGPGLELGVGVYTLVRPCYKPTAVKLSRN--TNEELKTHSKTY------LRET 302
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN- 336
+V+ P+ K YG + + + E +K E KL+GF +S + ++Y++K
Sbjct: 303 GEVLMPQDLKKAQTYGGKRISFENDEINQIKNFGETGFKLMGFKPSSLLKKYYHVKPAQF 362
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--KINI- 393
++ E + +T +AL + E + AI + + + V L P E K N+
Sbjct: 363 IYPDETTITGSTTLFTALLKKSLERDVTAICKYISGKNFPPRFV-ALVPQEEEFDKQNVQ 421
Query: 394 --PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 451
P F+ LPFA+D R+ +F K +Q E A ++K +
Sbjct: 422 ISPPGFHVIYLPFADDFRKVKFEEQPK------AGSEQVEKAKEMIKKMKFT-------F 468
Query: 452 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP-DPTLLAESQSAIDAF 507
E NP+L++++ ++E + + AP ++D T P D +L + AID F
Sbjct: 469 NSENFENPSLQKYWRNIEALALDR-TAPEEVED----FTLPDDERMLKRAGEAIDNF 520
>gi|340054033|emb|CCC48327.1| putative KU80 protein [Trypanosoma vivax Y486]
Length = 617
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 305 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE-PGNSRATVAVSALARAMKEMNK 363
EAVK + + ++ + + + D + I P + A ++ RAM +
Sbjct: 311 EAVKIRGPRGLEAISCVSLKEVPVWLLVGDGSRTITPLPNDLTGAKAFRSIVRAMAQNGL 370
Query: 364 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 423
+VR V+ Q + V+GV P+ E D +F+ LPFAEDVR +FP + VS
Sbjct: 371 AMVVRYVYIQ-DANPVLGVCVPSSDEG---RDVLFFSALPFAEDVRHLKFPDYDSMGVSV 426
Query: 424 QPNEQQQEAA--DNLVKMLDLAPSGKGEILQPELTPNPALERFY 465
+ ++E A ++V + + P ++L P T NP L++ Y
Sbjct: 427 GESVMEEEEALVASVVDGMTVGP----DVLNPHQTFNPFLQQLY 466
>gi|397576290|gb|EJK50171.1| hypothetical protein THAOC_30890 [Thalassiosira oceanica]
Length = 584
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYY 331
+D + VP +R YRYG +VP+ + + +K F +K +++G+ D ++++
Sbjct: 308 KDSAVEVPIAKRTNAYRYGSDLVPVGKMDEDGLKAPFFSDKKLTEVMGYLDKNDVVNSNL 367
Query: 332 MKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
+ I S R A++AL++A++E +KVA + + ++ + +VG L P + K
Sbjct: 368 LAGPTYAIFGGDKSVRGRTAIAALSQALEETDKVAFCK-LKKEKKSEPIVGALFPKIQGK 426
Query: 391 INIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE-----QQQEAADNLVKMLDLAPS 445
+ S N + E + SK QP E ++ +A D ++ + +A
Sbjct: 427 DDGAGSSQQNGGRYLEFIALPYVGDLSKMVSRRQPEEYRGTVEEDKACDEMIDAMMIADC 486
Query: 446 --GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL-DDSLKKITEPDP-------- 494
+I P ++ N + + + KS + + L D++++K+ + P
Sbjct: 487 DFNSFDISVPAMSANHKMVAHF-ATDPKSAKDETSKEGLPDNTIRKVAQAMPLCEYDVPI 545
Query: 495 TLLAESQSAIDAFCGQFVIKEN 516
+ +S+ +D F +F + EN
Sbjct: 546 IIAKKSKKEVDVFISKFPLIEN 567
>gi|113913537|gb|ABI48912.1| YKU80 [Saccharomyces pastorianus]
Length = 621
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S ++ + K YRYG V + S E ++ + L GF D + R+Y + +
Sbjct: 305 SAIISKDSVTKAYRYGADYVVLPSVLVEQTVYETFPGMDLRGFLDREALPRYYLTSESSF 364
Query: 338 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
+A+ G +A SAL M E KVA+ R V R+ + V + L P + E+ +
Sbjct: 365 IVADTRLGCLSDAMAFSALVDVMLENRKVAVARYVSRKDSE-VTMCALCPVLIEQEDNER 423
Query: 393 -IPDSFYFNVLPFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLV 437
+ S LPFAED R FP ++ S P NE ++ D+L+
Sbjct: 424 KVVRSLISCRLPFAEDERVTDFPKLLNRTTTSGVPLKNETDEDQIDDLM 472
>gi|317035392|ref|XP_001396808.2| ATP-dependent DNA helicase II subunit 1 [Aspergillus niger CBS
513.88]
Length = 653
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 118/580 (20%), Positives = 231/580 (39%), Gaps = 112/580 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y + + D+ V H V+ L+ L GD + +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDE--GDSREVLSPAK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + + + L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDL 203
Query: 156 GLRMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
G+ ++ + ++ SL +P +++D SK ++A +
Sbjct: 204 GVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPAYLQSD------SKAATATGDGI 257
Query: 199 DSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
+L + +R + T F LEL +I V Y L++ +AP+
Sbjct: 258 SLLNTLLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPAR 306
Query: 258 DKFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
+ F V S +D + V + K Y++G V S E +A++ E
Sbjct: 307 NSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGE 366
Query: 313 KSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
++++GF + + ++H Y ++ +E ++ SAL + + K+A+V
Sbjct: 367 PVIRVIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMALV 422
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
+ R+G V+ ++ EK++ P + LPFA+D+R+ + + P
Sbjct: 423 WFIARKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP- 479
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
E + +V+ L L P G + +P PNP+L+ Y L+ + +D P
Sbjct: 480 -----ESLIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQWHYRILQALALDEDLPEKP 530
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
D ++ K + ID G +V+ +L+K
Sbjct: 531 EDKTIPKYRQ------------IDKRAGDYVLSWADELEK 558
>gi|358057495|dbj|GAA96493.1| hypothetical protein E5Q_03161 [Mixia osmundae IAM 14324]
Length = 889
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVK----FKPEKSVKLLGFTDASNILRHYYMKDVN 336
V PE +K Y+YG +VP+ A+++ +K F+P ++++ FT AS I + DV
Sbjct: 407 VRPEDLVKAYKYGATLVPL--ADFDEIKTDLNFQP--GLQVISFTKAS-IALETLLGDVY 461
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS----VVVGVLTPNVSEKIN 392
A + + V SA AM E VA+ R V ++G +G L P + + N
Sbjct: 462 YVHAHQDSPPSQVMFSAFIHAMHERQAVALTRYVGKRGAAGKAPDAKLGYLIPRIGKHWN 521
Query: 393 IPDSFYFNV-LPFAEDVREFQFPSFSKF 419
+ V LPF+ED+R ++ S +
Sbjct: 522 EDYQYCIWVQLPFSEDIRMYEMDSIEYY 549
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 5 REALLLLLDVSPSMHSV--LPD---------VEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
R L L+D S SM + P+ + L +R K L K +GV LFG++
Sbjct: 10 RNVTLFLVDCSSSMANKHDFPEGRISSRDYAIRFLAARFTSKILKGLKTEHLGVTLFGSD 69
Query: 54 ETENELTKE-VGGYEHVKVLQDIKVVDGHLVQS--LKHLPQGTCAGDFLDAIVVGVDMLI 110
+T N L E V GYE+++ I + L S L+ + GD L A+ + L
Sbjct: 70 KTSNVLADENVEGYENIRT-NFIPISQPTLESSERLQRIRTSDMCGDILSALACALYQLQ 128
Query: 111 KKYGETYKG-KKHLCLITDA 129
+ G++ +K L L+TDA
Sbjct: 129 SELGKSRVAYRKTLVLVTDA 148
>gi|170084897|ref|XP_001873672.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651224|gb|EDR15464.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 227
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 27/163 (16%)
Query: 9 LLLLDVSPSMHSVL-------PDVEKLCSRL-------------IQKKLIYG-KNHEVGV 47
+ L+D SPSM ++ PD E + L IQ+ + G K + GV
Sbjct: 12 MFLVDTSPSMGTLRTIDLPPGPDGECRTANLTNLEWALQFIKLKIQEMIFNGRKTDQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
I+FG+EET N + ++ GGYE+V I + + + L + +GD +DA++VG++
Sbjct: 72 IVFGSEETNNIVNEKNGGYENVIEYIPIGQPNAGTLAKIDALQPSSVSGDPIDALIVGIE 131
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR 150
+ + ++TD P++ ED +T+A+
Sbjct: 132 TQANYLSSKKTWTRKVIMVTDGESPIE------VEDWEATVAK 168
>gi|149015963|gb|EDL75244.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_b [Rattus norvegicus]
Length = 228
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPL 133
GKKH+ + TD P
Sbjct: 125 KKFGKKHIEVFTDLSSPF 142
>gi|326483178|gb|EGE07188.1| Ku70 protein [Trichophyton equinum CBS 127.97]
Length = 668
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 457
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 458 NPALERFYHHLELKSEHQDAAPPPLD---------DSLKKITEPDPTLLAESQSAID-AF 507
NP+L+ Y L+ + +D P D D + ++ P P E A D
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKYKAIDKVDDVSAPAPRNFLERHQANDMQR 566
Query: 508 CGQFVIKENPKLKKSTRRFLREKPSGS 534
G VI+ +L+ R + +P+ S
Sbjct: 567 TGDLVIEWGEELEAQYRALEKSQPATS 593
>gi|62822090|gb|AAY14659.1| unknown [Homo sapiens]
Length = 163
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDM 108
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ DFLDA++V +D+
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 109 LIKK-YGETYKGKKHLCLITD 128
+ + G+ ++ K+H+ + TD
Sbjct: 118 IQHETIGKKFE-KRHIEIFTD 137
>gi|389749569|gb|EIM90740.1| Ku DNA-binding complex Ku70 subunit [Stereum hirsutum FP-91666 SS1]
Length = 648
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNIL-----RH 329
++VVPP R+ +AE E KF+ E S+KLLGF D +L +H
Sbjct: 355 TRVVPPNTRV-----------FYTAE-EIKKFRSLGLEPSIKLLGFKDKDQLLFEDNIKH 402
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
Y ++ E + + VSAL ++M + +K+ +V ++R+G + +L E
Sbjct: 403 SYF----IYPDEMAYTGSKRTVSALIKSMAKKDKIGLVLALFRRGSSPIFCAMLAQK--E 456
Query: 390 KINI-----PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAP 444
KI P F+ LPFA+D+R P F P E + A ++K
Sbjct: 457 KIEAGGWREPGGFHLIPLPFADDIR--AAPIEEGFIA---PKELSRLAETFVLKCSLKDK 511
Query: 445 SGKGEILQPELTPNPALERFYHHLELKS 472
G P+ PNPAL+ +HH +L++
Sbjct: 512 KG----YSPDTYPNPALQ--FHHEQLQA 533
>gi|326475016|gb|EGD99025.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 646
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 37/257 (14%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 457
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 458 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 518 KLKKSTRRFLREKPSGS 534
+L+ R + +P+ S
Sbjct: 555 ELEAQYRALEKSQPATS 571
>gi|213972572|ref|NP_001135434.1| ATP-dependent DNA helicase II [Nasonia vitripennis]
Length = 579
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 30/274 (10%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAE 341
E I GY+YG + +P S + A+K+ K + + GF + L + L + E
Sbjct: 296 ENIINGYKYGGKYIPFSDDDEVAMKYSGSIKGMMVYGFVPQDEVQLECWTGSGSRLIVPE 355
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
N VA +L +AM E AIVR V+ +GVL P V + D + V
Sbjct: 356 TDND--AVAFYSLVQAMVEKRYAAIVRKVYANNNLP-RMGVLFPKV-----VYDDVWGFV 407
Query: 402 ---LPFAEDVREFQFPSFSKFPV---SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 455
LPF D+R Q K P+ N+++ +A D+ + + + E L P +
Sbjct: 408 HIELPFVTDLRIIQ-----KRPIQSLDGTVNKEKLDALDDFIDAMTIV-DNDPEYLNPGM 461
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF---- 511
PN + ++ + + + A PL+ LKK EP L + ++ + F
Sbjct: 462 FPNVINQYHWNAIADRVLNPKGALLPLNGYLKKFLEPPEYLNDKVKTHYEKLRKLFGNIN 521
Query: 512 VIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 545
+ KE K KKS R P ++EP G+ D
Sbjct: 522 MHKETTKDKKSARV----APKIANEPEKTGATKD 551
>gi|336365738|gb|EGN94087.1| hypothetical protein SERLA73DRAFT_63055 [Serpula lacrymans var.
lacrymans S7.3]
Length = 228
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 9 LLLLDVSPSMHSV----LP--------DVE--------KLCSRLIQKKLIYG-KNHEVGV 47
+ L+D+SPSM ++ LP VE + IQ+ + G K + GV
Sbjct: 5 IFLVDISPSMGAMRTVDLPPGPKGEQGTVEMTNLEWSMQFVKLKIQEMIFNGRKTDQCGV 64
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVD 107
I+FG+E+T+N + + GGYEHV + + + L L GD +DA++VG++
Sbjct: 65 IVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSPSEVTGDPVDALIVGIE 124
Query: 108 MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ + + L+TD P++ D ++ +++ + G+
Sbjct: 125 TQDQYLSSKRTWTRKIVLLTDGENPIEIEDWEATVQKMDSLSIALTVVGV 174
>gi|330805479|ref|XP_003290709.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
gi|325079131|gb|EGC32746.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
Length = 528
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 112/540 (20%), Positives = 213/540 (39%), Gaps = 81/540 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R+ ++ L+D S SM E K + I K+I ++ +GV + T++ +N
Sbjct: 4 RDCIVFLIDASKSMFDQNDSGEVPFYNAIKCLIQTITDKIITSESDLIGVCFYNTDKKKN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-------GTCAGDF--LDAIVVGVDM 108
+ +E++ VL ++ + D ++ L+ + + G GDF DA+ M
Sbjct: 64 -----INDFENIYVLSELDIPDPKIILQLEDILENDFSKSFGHFNGDFPLCDALWTCSTM 118
Query: 109 L-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 163
+ K + L T+ +P+ + ++ TI R L ++ +
Sbjct: 119 FSNMKQTSAQSQQQNNFKRIFLFTNQ----DNPNQYNEGNRNLTIQRAKDLSELNIQIEL 174
Query: 164 VRASLSGEP------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL-RGARKTRDISPV 216
+ GE + +++ D+ I + +A T F + + L R K R + +
Sbjct: 175 FSMNKPGEQFDFTLFYQNILVFGDDDQYIDPNQFNASTKFSELLSKLKRKEFKKRSLGKI 234
Query: 217 TIFRG---DLELSEKMKIKVWVYK--KTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 271
++ G D + ++ I +Y T + P L P T+ VK
Sbjct: 235 PLYIGSSSDNNNNNQIVISTQMYNLFSTARKSSPVLLD-----PKTNLPVKQLVK----- 284
Query: 272 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 331
E + P Q + + YG + V S E +++K + LLGF S I ++
Sbjct: 285 NVCEATGATLLPSQIKQSFYYGGEPVIFSKDELDSIKSIDRIGLTLLGFKPTSAIKAYHS 344
Query: 332 MKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 390
+K + +F E +TV ++L M + +KVAI R R G +V +L P
Sbjct: 345 IKHSSFIFPDEQMIKGSTVTFNSLVEQMLKSDKVAICRFTSRSGSAPRMVALL-PQEEIL 403
Query: 391 INIPDSF----------YFNVLPFAEDVREFQFPSFSKFPVS---WQPNEQQQEAADNLV 437
IN DSF + LP+A+D+R PV+ + N+ ++ +
Sbjct: 404 INEFDSFGKIQFRPRGMHIIYLPYADDIRH---------PVNVGIVKKNKSDEKKDQESI 454
Query: 438 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
++ + NP+L++ Y L+ + +D+ +D+ +PD L+
Sbjct: 455 ELAKKIIKSMKIKFDEKKYLNPSLQKHYASLQALALERDSIEETIDN-----IQPDQQLI 509
>gi|302497513|ref|XP_003010757.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
gi|291174300|gb|EFE30117.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
Length = 376
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 391
M + N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +V +L P++
Sbjct: 1 MSNSNVIIAQRTNNKAIIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID--- 56
Query: 392 NIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 440
PD LPFAEDVR ++FP + PNE A + V+ +
Sbjct: 57 --PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVVKEHRNLPNENLLSAMEKYVENM 114
Query: 441 DLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 500
+L P E + ++ H PP+ L+K + L+ S
Sbjct: 115 ELV--------------QPGEEGVDQAIRWRAIHPTKPLPPIPKVLQKQSRQPDELMEHS 160
Query: 501 QSAIDAFCGQFVIKENPKLKKSTRRFLR 528
+SA++ +K+ KLK S R R
Sbjct: 161 KSALEQLIKTSDVKKG-KLKPSIPRVGR 187
>gi|340517647|gb|EGR47890.1| hypothetical protein TRIREDRAFT_63200 [Trichoderma reesei QM6a]
Length = 649
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 135/643 (20%), Positives = 263/643 (40%), Gaps = 87/643 (13%)
Query: 5 REALLLLLDVSPSMHSVLP-------------DVEKLCSR-LIQKKLIYGKNHEVGVILF 50
++A+LL ++VSPSM P C+R L+++++I +G++LF
Sbjct: 36 KDAILLAIEVSPSMLEPPPVSSSRKADRDSPVQAALKCARHLMEQRIISNPKDMMGILLF 95
Query: 51 GTEETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFL-----DAIV 103
GTE+T+ ++ + GY + + D+ + V++LK L + + L D +
Sbjct: 96 GTEKTKFRDDNGRSGLGYPNCYLFMDLDIPAAEDVKALKALTEDEDEDEVLKPATTDTVS 155
Query: 104 VGVDMLIKKYGETYK----GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 159
+ + T K G + L ++TD DP K + + R + L +
Sbjct: 156 MSNVLFCANQIFTTKAANFGSRRLFIVTDN----DDPHASDKAARSAAAVRAKDLYDLGI 211
Query: 160 KNIVVRASLSGEPHMRV------IIEND-----NLLNIFSKKSSAKTLFVDSTTSLRGAR 208
I + +G+ + I+ D N + + KS ++S S ++
Sbjct: 212 -TIDLFPITTGDSKFDLSKFYDDIVYRDPNAEANRTEVRASKSGDGLSLLNSLISNINSK 270
Query: 209 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
+T +F E++ +KI V Y + P Y + AT E
Sbjct: 271 QT---PKRALFHLPFEIAPGLKITVKGYNIV-HRQTPARTCYIWLEGEKAQIATGETT-- 324
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-L 327
+ ED ++ V ++ K Y++G + V + E + ++ +++++GF S I +
Sbjct: 325 ---RVAEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKKLRDFGAPTIRIIGFKKRSMIPV 381
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
K +F +E +T SAL + + + +K+ + CV R Q + ++
Sbjct: 382 WASVKKSTFIFPSEEDYIGSTRVFSALWQKLLKDDKIGLAWCVLRSNAQPMFAALIPSRE 441
Query: 388 SEKIN-----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
+ + +P + LP A+D+R+ K S E + +V+ L+L
Sbjct: 442 QSEDDAGTPYLPAGLWLYPLPTADDLRDINVE--RKLDCS----EDLKTKMRVIVQQLNL 495
Query: 443 APSGKGEILQPELTPNPALERFYHHLEL-------KSEHQDAAPPPLDDSLKKI----TE 491
P G I P PNPAL+ Y L+ E +D P K++ E
Sbjct: 496 -PKG---IYNPLKYPNPALQWHYKILQTLALEEEMPEEPEDLTEPKNKAISKRVGGYLEE 551
Query: 492 PDPTLLAESQSAIDAFCGQFVIKEN-PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN 550
TL E+ A + + I+++ P+ R+ E+PSGS+ +S AQ +
Sbjct: 552 WSETLKDEADRATRSRSLKREIEDDAPERPAKQRKVAGERPSGSN-------LSMAQLRD 604
Query: 551 SMESKPV--VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 591
++ES + +TV ++ D+ + + D + +++ +E+
Sbjct: 605 AIESGSISKMTVAQLKDVAGARGLSTGGKKADLLERIEQWVEE 647
>gi|302507648|ref|XP_003015785.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
gi|291179353|gb|EFE35140.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
Length = 627
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 457
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 458 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 518 KLKKSTRRFLREKPSGS 534
+L+ R + +P+ S
Sbjct: 555 ELETQYRALEKSQPATS 571
>gi|195050106|ref|XP_001992829.1| GH13494 [Drosophila grimshawi]
gi|193899888|gb|EDV98754.1| GH13494 [Drosophila grimshawi]
Length = 711
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 137/671 (20%), Positives = 269/671 (40%), Gaps = 84/671 (12%)
Query: 1 MARTREALLLLLDV-SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
MA +E L+++LDV S + K + +++ K++ + V +L G EE+ENE+
Sbjct: 1 MASNKECLIIVLDVRSCAAEEFKLKSVKCIAEILKDKIVCDRKDFVSFVLVGCEESENEI 60
Query: 60 TKE-VGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTC-AGDFLDAIVVGVDMLIKKYGET 116
E ++V +V + L+ + K + + C G++LD + V V + G
Sbjct: 61 HAEDKDACQNVVQYSATQVCNWQLLLNFFKFVNKTPCDEGNWLDGLQVAVALQETAAGLF 120
Query: 117 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM----KNIV-VRASLSGE 171
++ + L+ D + K D TI +M+ + + NI + + + +
Sbjct: 121 RFTRRRILLLYDF------NFMTQKYDDYKTITDRMLKDEIELIVGTHNIAYIDNAATNQ 174
Query: 172 PHMRVIIENDNLLNIFSKK---------SSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
P + I + N+F ++ S+ + +L K + P ++
Sbjct: 175 P--QAIFQMSRKANLFEQENQKYALQLVSNCNAMLCTFKEALATVFKITNKRP-WVWNAK 231
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
L + + + I + E+ LKK +A E VD E + ++V P
Sbjct: 232 LHIGKVIAIHLQGIIAMKNERHIKLKKVWGEA---------EELVDREERYFIKGTEVTP 282
Query: 283 -PEQRIKGYRYGPQVVPISSAEWEAVKFKPEK---SVKLLGFTDASNILRHYYM-KDVNL 337
PE I GY G VP E + +P + +GF S+I Y+ + + +
Sbjct: 283 LPEDLIDGYMLGGTPVPYD----ETIVERPAAHSPGLHFVGFVKRSSIPDAYFCGESLYM 338
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
+ + GN + + AL RA+ + V + ++ + + VL P S + + P +
Sbjct: 339 LVHQKGNETSARKLDALVRALLQRQCVILCWKIFSVKFNTPRIVVLMPQDSTE-HRPATL 397
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL-----Q 452
Y L + + + FP+ ++ Q A D L+ +DL L Q
Sbjct: 398 YMLELSYHAQHQFWDFPAIRTAKTECSADQLQ--AVDKLIDSMDLECLLNDTQLPRQQRQ 455
Query: 453 PELTPNPALERFYHH-----LELKSEHQDAAPPPLDDSL--KKITE-----PDPTLLAES 500
+L P L + LE K Q + PL + + KK E P+P + +S
Sbjct: 456 ADLLPFDGLPSIFEQNVMDVLERKVVCQTSDDGPLLEMMREKKFVEMYWRVPEP-IEEKS 514
Query: 501 QSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTV 560
+ A A F ++ + +L + + E N ++ + +S + P+ T+
Sbjct: 515 KQAAAALKKLFPLEH-------SHAWLEKLKAKEQESNAPPTIKQERP-DSENTTPI-TI 565
Query: 561 DKIGDLTPIQDFEAMMSR-RDCPDWVDKAIE------DMKNKIFGLLENSNEGINYPKAV 613
+ +G +TP +D+ ++ + R + + ++ M+ + LLE + +N +
Sbjct: 566 ECVGLMTPAEDYRQLLEQVRSMANTTLRDVQFQSLAAQMRVVVITLLERNK--LNLNQLS 623
Query: 614 ELLVALRKGCI 624
E+L R C+
Sbjct: 624 EMLAMHRDSCL 634
>gi|159489188|ref|XP_001702579.1| DNA binding protein [Chlamydomonas reinhardtii]
gi|158280601|gb|EDP06358.1| DNA binding protein [Chlamydomonas reinhardtii]
Length = 1076
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL---TKEVGG 65
+L+LDV P M LP + +L ++ KL++ HEV V+L+GTE T +EL +
Sbjct: 10 VLVLDVGPHMQPYLPLLHRLVFNVLNTKLLFKPLHEVAVVLYGTEGTRHELHDPSDAAST 69
Query: 66 YEHVKVLQDIKVV 78
Y HV VL+ ++ V
Sbjct: 70 YPHVTVLRPLQAV 82
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL--RHYYMKDVNLFIAEPGN 344
++GY +G QVVP+ + + K LLGF L RH + + ++ +
Sbjct: 488 VRGYNFGAQVVPVDEVTAATAQLQFAKDFSLLGFAPEPLALVPRHRLVAEPSVVVGADAT 547
Query: 345 SRATVAVSA------LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
+ A +A A L AI R R ++V+ LTP++S ++PD
Sbjct: 548 ATAALAALARAMDAPLVAGGPRPGTGAIARLKNRAAIPALVL--LTPHLSHSPDVPDCLL 605
Query: 399 FNVLPFAEDVREFQFPSF 416
+ LP+ ED+R F FP+F
Sbjct: 606 LSPLPYFEDIRTFFFPTF 623
>gi|74218207|dbj|BAB26920.3| unnamed protein product [Mus musculus]
Length = 284
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVGVDMLIKKYGE 115
N L + Y+++ V + + + D L++ + + Q + DFLDA++V +D++ ++
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 116 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 160
GKKH+ + TD P +DQ+ I + G+ ++
Sbjct: 125 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQ 162
>gi|281203277|gb|EFA77477.1| hypothetical protein PPL_12079 [Polysphondylium pallidum PN500]
Length = 180
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 560 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 619
V+++G + +Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +V L
Sbjct: 47 VNEVGSINQVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVEL 105
Query: 620 RKGCILEQVYLSVSFF 635
R+G I E L+ F
Sbjct: 106 RRGSIKESESLNRDDF 121
>gi|112362647|emb|CAL35988.1| HDF2 protein [Saccharomyces bayanus]
gi|112362649|emb|CAL35987.1| HDF2 protein [Saccharomyces bayanus]
gi|112362651|emb|CAL35986.1| HDF2 protein [Saccharomyces bayanus]
gi|112362653|emb|CAL35985.1| HDF2 protein [Saccharomyces bayanus]
Length = 621
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R+Y + + +A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYETFPGMDLRGFLDREALPRYYLTSESSFIVADTRLGCL 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG---VLTPNVSEKINIPDSFYFNVL 402
++A SAL M E K+A+ R V R+ + + VL + + S L
Sbjct: 375 SDSMAFSALVDVMLENRKIAVARYVSRKDSEVTMCALCPVLIEQAGSERKVVRSLISCRL 434
Query: 403 PFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLVKML 440
PFAED R FP ++ S P NE ++ D+L++
Sbjct: 435 PFAEDERVTDFPKLLNRTTTSGVPLKNEADEDQIDDLMEQF 475
>gi|112362683|emb|CAL35970.1| HDF2 protein [Saccharomyces kudriavzevii]
gi|401841082|gb|EJT43623.1| YKU80-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 622
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 366
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 367 VRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYFNVLPFAEDVREFQFPS-FSKF 419
R V ++ + V + L P ++ + + S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 420 PVSWQPNEQQ--QEAADNLVKML 440
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|392564799|gb|EIW57977.1| ku70-like protein [Trametes versicolor FP-101664 SS1]
Length = 663
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 123/549 (22%), Positives = 208/549 (37%), Gaps = 87/549 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D + C+ ++ +KK++ G N VG++LF
Sbjct: 27 RDVILFCIDCSPSMLEMRDDERYEDVQTCNLMVALEAAMQIQKKKVLVGPNDAVGIVLFN 86
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTCAGDFL---------DA 101
T + + + V Q + +D V L + L + DFL
Sbjct: 87 TTKRNDNADDSTDVKKGTYVYQPLATIDAPKVMELVQLLDEAREKPDFLRKTFPPMTDKR 146
Query: 102 IVVGVDML-----IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
I VG D+L + + G K + ITD DP G + T AR +
Sbjct: 147 IAVG-DVLTSCNWVMRDGAPKTATKRIFFITDE----DDPHPGPSGHRFITSARTTL-ID 200
Query: 157 LRMKNIVVRASLSG------EP---HMRVIIEND--NLLNIFSKKSSA---KTLFVDSTT 202
L + V G +P + V++ + +L +I + +++ +
Sbjct: 201 LMQTGVTVEPFFIGTEDKPFDPAKFYSSVLLPTNLTDLDDISDGDPGSILPESISITRVE 260
Query: 203 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 262
L + ++ +F L L+ I V Y E+K + ++D + +
Sbjct: 261 ELLAQMRFHEVPKRALFSVPLTLAPGFMIGVKGYGLITEQKKGAYRYFADLGDRMEPVTS 320
Query: 263 HEVKVDYEYKSVED------------PSKVVPPE--QRIKGYRYGPQVVPISSAEW---- 304
VD + + D PS V E Q K G + V + S +
Sbjct: 321 RAAYVDEDRDAEADKAEILYGMDLGAPSAEVDGEEGQDAKTSDVGTRAVQLGSRVFYTAD 380
Query: 305 EAVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKE 360
E F+ E +KLLGF D S + +K V ++ E S + +AL R M +
Sbjct: 381 EVRSFRTLGLEPGIKLLGFKDRSELAFEDNVKHSVFVYPDEMTYSGSKRTFTALLRTMIK 440
Query: 361 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQFPS 415
K+AIV + R+ V VL +EK++ P F+ LPFA+D+R
Sbjct: 441 KEKIAIVLALMRRNASPVFCAVLPQ--AEKVDESGWREPPGFHLIPLPFADDIRA----- 493
Query: 416 FSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQ 475
+ ++ + + AA ++ L + K P+ PNPAL LE + +
Sbjct: 494 -ASQQKGFRASTELVAAARKWIEKLKV----KNGSYPPDSYPNPALAYHNTQLEASAFRE 548
Query: 476 DAAPPPLDD 484
D P +D
Sbjct: 549 DFDPDAFED 557
>gi|327298311|ref|XP_003233849.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
gi|326464027|gb|EGD89480.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
Length = 646
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDDNGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 457
LP+A+D+R+ P A D+L+ KM + + + Q P P
Sbjct: 460 PLPYADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPRRYP 506
Query: 458 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALEEDLPEKPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 518 KLKKSTRRFLREKPSGS 534
+L+ R + +P+ S
Sbjct: 555 ELEAQYRALEKSQPATS 571
>gi|112362681|emb|CAL35971.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 308
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 366
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 367 VRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYFNVLPFAEDVREFQFPS-FSKF 419
R V ++ + V + L P ++ + + S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 420 PVSWQPNEQQ--QEAADNLVKML 440
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|193645803|ref|XP_001952755.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 544
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 175/441 (39%), Gaps = 72/441 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
++ ++ L+D S MH+ D LC +++ K + +N ++G++++GT + +
Sbjct: 26 KQHIIFLIDASKPMHNTYNDTTFFATCIALCKKIVLKLIRESRNDKIGILIYGTNDANKK 85
Query: 59 LTKEVG--------GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLI 110
K + + +K L D V+ G L+Q+ G C L V + LI
Sbjct: 86 CPKYINVLSEPIKPNIQLIKKLDD--VLTGKLIQT------GQCPLSPLSDAVWYSNYLI 137
Query: 111 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASL 168
KK E + + D PD+G + Q R ++ + K I + A+
Sbjct: 138 KKCSENQSCSTIMLITCD-----DQPDIGDSKKQFHLRTRIDDVIKNNIDFKLIPIGATF 192
Query: 169 SGEPHMRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE 227
+ +++N N ++ + S + +D L+ R +S + F ++
Sbjct: 193 NMNLFYEGLLKNFNSISKPINGLESIDDIMLDINDKLKHG---RSVSKIKFF-----INN 244
Query: 228 KMKIKVWVYKKTGEEKFPT---LKKYSDK--APSTDKFATHEVKVDYEYKSVEDPSKVVP 282
I +YK + K P+ L K ++K +T F H ++ Y+
Sbjct: 245 DFYISTALYKFYTKLKMPSKVKLDKRTNKPLTSNTQVFTLHTNELMYK------------ 292
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
+ K + + + E +K KP ++LLGF NI+ Y+ K ++F+
Sbjct: 293 -SDQAKYLELANEKIIFKNEEMTILKNGIIKP--GIRLLGFISKKNIMIFYHFK-TSIFL 348
Query: 340 AEPGN---SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-----NVSEKI 391
P N +T + L E NK R+G + +V +L P N +
Sbjct: 349 -RPNNEVVESSTHMFNTLLECCLEKNKCIKCSLKIRKGGKVNLV-ILIPQAEIMNETGTQ 406
Query: 392 NIPDSFYFNVLPFAEDVREFQ 412
N P F+ LPF+ V++ +
Sbjct: 407 NHPSGFHVIFLPFSGCVKKVK 427
>gi|254580595|ref|XP_002496283.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
gi|238939174|emb|CAR27350.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
Length = 594
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 288 KGYRYGPQVVPISSAEWEAVK--FKPEKS-VKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
K + YG + I+ E V+ + E+S +K++GF D + + ++ D LF+ P
Sbjct: 328 KVFPYGDLDITITDEELNEVRKSYTEEESFLKIIGFRDYNKCIHYFNNIDRALFVV-PDE 386
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNVL 402
R ++ LA K + V VW + + + V VL+P+ +E N + FY +
Sbjct: 387 FRFEGSIRTLASLFKNLRAKGKVAVVWGKLKTNSHPAVFVLSPSRNEDPN--EGFYLYRI 444
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFAE++R +FP S+ E Q D ++D KG +P NP L+
Sbjct: 445 PFAEELR--RFPQSLIRHNSYDTPEYNQ-LKDTTKSIIDHFQFAKG--YRPSEFRNPDLQ 499
Query: 463 RFY-----HHLELKSEHQDAAPPPL-------DDSLKKITEPDPTLLAESQSA 503
+ + + L+++ E +D +P DDSL K+ + ++ +QS+
Sbjct: 500 KHFKILHDYLLQVEQEEEDDSPESSKQRLLSEDDSLLKLAQIRDKIMDSAQSS 552
>gi|315041481|ref|XP_003170117.1| Ku70 protein [Arthroderma gypseum CBS 118893]
gi|311345151|gb|EFR04354.1| Ku70 protein [Arthroderma gypseum CBS 118893]
Length = 646
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 43/260 (16%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E ++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAELRNFGEPIIRIIGFKPLSSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + NK+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQNKMALVWFVPRRNAAPVMAAMIAGE--EKLDDNDIQIIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLA-----PSGKGEILQPE 454
LPFA+D+R+ P A D+LV KM + P G+ P
Sbjct: 460 PLPFADDIRQ-------------NPELNHISAPDSLVDKMRTIIQQLQLPKGQ---FDPH 503
Query: 455 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 514
PNP+L+ Y L+ + +D D ++ K AID G+ VI+
Sbjct: 504 RYPNPSLQWHYRILQALALDEDVPEQAEDKTIPKY------------KAIDKRAGELVIE 551
Query: 515 ENPKLKKSTRRFLREKPSGS 534
+L+ R + +P S
Sbjct: 552 WGEELESQYRALEKSQPVTS 571
>gi|452843591|gb|EME45526.1| hypothetical protein DOTSEDRAFT_170971 [Dothistroma septosporum
NZE10]
Length = 658
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
ED ++ V + + Y++G + + + E ++ + ++++GF S +L + D
Sbjct: 342 EDTARTVEKVEIRRAYKFGGETISFTEEELAKIRNFGDTVLRIIGFKPIS-LLPMWASVD 400
Query: 335 VNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ FI +E G +T SAL + + + +K+ + + R+ +V V+ P V E+ +
Sbjct: 401 KSTFIYPSEDGWVGSTRVFSALHQKLLKDDKMGLAWYIPRKNSVPKLVAVI-PGVEERND 459
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LP+A+D+RE S + P ++ +A +V+ L L +
Sbjct: 460 EGEQKMPPGLWLKPLPWADDIREAPETSLVRAP------DRVTDAMRIIVEQLQLPKA-- 511
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
+ P PNP+L+ FY L+ + +D P D +L K
Sbjct: 512 --VYDPYRYPNPSLQWFYRILQALALEEDLPEQPDDKTLPK 550
>gi|328353988|emb|CCA40385.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 608
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 240 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 289
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 290 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 348
Query: 368 RCVWRQGQQSVVVGVLTP 385
R R V +G L P
Sbjct: 349 RYTLR-SSSGVFMGALIP 365
>gi|320582600|gb|EFW96817.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Ogataea
parapolymorpha DL-1]
Length = 656
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
+TDK+ T +E S + + + + YRYG VP++S+ + + +
Sbjct: 277 TTDKYVT------FEPDSQSTEPRFLDATEVQEAYRYGSSTVPVTSSLKQLLNINTYAGL 330
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQG 374
+L F +I Y+ + + + +S R + LA+A+ E + VAIVR V R
Sbjct: 331 DILQFVRRKSIPPWYFHGEAEILLNNQNSSVRDQFGFNMLAQALLEHDLVAIVRYVKRNA 390
Query: 375 QQSVVVG-----VLTPNVSEKINI--------------PDSFYFNV--LPFAEDVREFQF 413
+ + VLT K + PD + F++ LPFAED R F
Sbjct: 391 GTARLAAMSPCIVLTDATKYKHELQTGDKRKLEEMDGEPDHYGFSLVALPFAEDERLSTF 450
Query: 414 PSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
S S P+EQ + LV ++DL G G + +PE
Sbjct: 451 AKLSGVAESNGGDNLGSENFPSEQMLQEMGQLVDLMDL--DGPGSLKKPE 498
>gi|356576925|ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
max]
Length = 633
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
D H +K++ + V+ + V P +R Y+ Q + S + +K + L
Sbjct: 305 DSVTNHPLKIERTFICVDTGALVEEPTKRFLPYK--NQNIIFSMKQLSEIKRVSTGHLHL 362
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF S + +Y +K L+ ++ G + AL R+M ++N+ A+ Q
Sbjct: 363 LGFKPLSCLRDYYNLKPSTFLYPSDEGTDSSMCMFIALHRSMIQLNRFAVAFSGSSSRPQ 422
Query: 377 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAA 433
V + + I P + LP+++D+R E ++ S V+ ++Q ++AA
Sbjct: 423 LVALIAQEEVIQSGGQIEPPGMHMIYLPYSDDIRFVEERYSDTSGM-VNIASDDQIKKAA 481
Query: 434 DNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
NL+K +DL +I NPAL+R Y L+ + +D P D+SL
Sbjct: 482 -NLIKRIDLKDFSVCQI------SNPALQRHYAVLQALALEEDDIPEMKDESL 527
>gi|254574166|ref|XP_002494192.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
gi|238033991|emb|CAY72013.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
Length = 696
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 248 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 307
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 328 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 377
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 378 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 436
Query: 368 RCVWRQGQQSVVVGVLTP 385
R R V +G L P
Sbjct: 437 RYTLR-SSSGVFMGALIP 453
>gi|365989646|ref|XP_003671653.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
gi|343770426|emb|CCD26410.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGN 344
K YRYG V + + E + ++ S+ + GF D ++ R Y + ++FI G+
Sbjct: 330 KAYRYGADYVVLPPSLQEQLTYETWPSLDIRGFLDKDSLPR-YLLTSESIFIMPDTRLGS 388
Query: 345 SRATVAVSALARAMKEMNKVAIVRCV---WRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
V + L + +KVAI R V + + Q V+V +L + K I +F N
Sbjct: 389 QADNVTFNVLVDVLLGQDKVAIARYVPKYYSEVQMCVLVPLLVLHEDGKTLI-RAFVLNR 447
Query: 402 LPFAEDVREFQFPSFSKF-PVSWQPNEQQQE 431
LPFAED R FP +K S QP ++ E
Sbjct: 448 LPFAEDERVADFPRLTKRKTTSGQPIPEKDE 478
>gi|302677669|ref|XP_003028517.1| ku70-like protein [Schizophyllum commune H4-8]
gi|300102206|gb|EFI93614.1| ku70-like protein [Schizophyllum commune H4-8]
Length = 661
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 298 PISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSA 353
P +AE E KF+ E +KLLGF DA + +K + ++ E S + SA
Sbjct: 377 PFYTAE-EVKKFRTLGLEPGIKLLGFKDADTLAFEDNIKHSHFIYPDELAYSGSKRTFSA 435
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI----PDSFYFNVLPFAEDVR 409
L R++ + NK+ +VR + R+ + P + + + P F+ LPFA+D+R
Sbjct: 436 LLRSLVKKNKIGLVRVLTRRNATPTFCA-MVPQMEQTDDAGWTEPAGFHLIPLPFADDIR 494
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
+ + ++ EAA + + + G P+ PNPAL YH+ +
Sbjct: 495 Q------ATVEKGYRAGRPLMEAAMPFIHKITIKKGG----YPPDSYPNPALA--YHNEQ 542
Query: 470 LK----------SEHQDAAPPPLDDSLKKI 489
L+ SE +D P D KKI
Sbjct: 543 LQASAFREEYDPSEFEDQTLPAYDSMHKKI 572
>gi|358373931|dbj|GAA90526.1| DSB repair complex subunit Ku70 [Aspergillus kawachii IFO 4308]
Length = 653
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 118/578 (20%), Positives = 228/578 (39%), Gaps = 108/578 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y + + D+ V V+ L+ L GD D +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAQEVKELRALVDDD--GDSRDILAPAK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + + + L +ITD P D T + A+ +
Sbjct: 146 EQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDL 203
Query: 156 GLRMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
G+ ++ + ++ S +P ++ D SK ++A +
Sbjct: 204 GVTIELFPISRPEHEFKNSKFYDDIIYKSSPNDPEAPAYLQTD------SKAATATGDGI 257
Query: 199 DSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKA 254
+L + +R + T F LEL KI V Y ++ + + +K
Sbjct: 258 SLLNTLLSSINSRTVPRRTHFSNMPLELGPDFKISVSGYILLRRQAPARNSFIWLNGEKP 317
Query: 255 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 314
TH S +D + V + K Y++G V S E +A++ E
Sbjct: 318 VVAKGVTTH---------SADDTGRNVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPV 368
Query: 315 VKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
++++GF + + ++H Y ++ +E ++ SAL + + K+A+V
Sbjct: 369 IRVIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQMLLRNKKMALVWF 424
Query: 370 VWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 423
+ R+G V+ ++ EK++ P + LPFA+D+R Q P + V+
Sbjct: 425 IARKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIR--QNPE-TTLNVAP 479
Query: 424 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 483
+P Q +++ L L P G + +P PNP+L+ Y L+ + +D P D
Sbjct: 480 EPLIDQMRV---VIQQLQL-PKG---VYEPLRYPNPSLQWHYRILQALALDEDLPEKPED 532
Query: 484 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
++ K + ID G +V+ +L+K
Sbjct: 533 RTIPKYRQ------------IDKRAGDYVLSWADELEK 558
>gi|19075945|ref|NP_588445.1| Ku domain protein Pku70 [Schizosaccharomyces pombe 972h-]
gi|74582874|sp|O94395.1|KU70_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|4008550|emb|CAA22471.1| Ku domain protein Pku70 [Schizosaccharomyces pombe]
Length = 607
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 102/532 (19%), Positives = 213/532 (40%), Gaps = 93/532 (17%)
Query: 1 MARTREALLLLLDVSPSMHSVLPD-------VEKLCS-RLIQKKLIYGKNHEVGVILFGT 52
A + A+L +++VSPSM + + + +C+ +L +++I + +GV+L+GT
Sbjct: 13 FAIGKYAILFVIEVSPSMLDPVDEFTPSSLQMALICAYQLAAQRVITNPSDIMGVLLYGT 72
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG---------TCAGDF-LDAI 102
E + G + + +L DI D ++SL+ + C+ L ++
Sbjct: 73 ESS-------TGRFANQMMLLDIDPPDAERIKSLQSFEKDFQFSKEKFKPCSCQVSLSSV 125
Query: 103 VVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 162
+ ++ E ++ K L LITD P D T+ D + A+ + +++ +
Sbjct: 126 LYHCSVIFTTKAENFE--KRLFLITDNDHPAWD---ATERDIILQRAKDLRDLDIQVHPV 180
Query: 163 VV-------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ R ++ + ++ ++ N+ ++ + ++ T+L+ ++
Sbjct: 181 FLDPPTHSFRINIFYSDFLYIVYGRQDVSNLVNRGQAQLQHMLNMITALQKPKRAH---- 236
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 275
F ++L ++I G E F LK+ K ++ Y E
Sbjct: 237 ---FHLKMDLGNDVRI--------GVEAFILLKR------------LESAKTNWVYAKGE 273
Query: 276 DPSKVVPPEQRI--------------KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
+ VP +++ + Y YG V S E V+ +++++GF
Sbjct: 274 RFAVAVPQSKQVSFATKKELKKDEIRRSYSYGGSSVVFGSDELNKVRSFEPPTLRIIGFR 333
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVV 380
D S + + +K + + AV SA+ + + NK+ I V R V
Sbjct: 334 DFSTLKPWHCLKPAVFLRPKDDEIIGSGAVFSAIHKKLLASNKIGIAWFVSRPNANPCFV 393
Query: 381 GVL-TP---NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
+L TP ++ + +P + LP A+D+R P + P+S N E +
Sbjct: 394 AMLATPGSIHIRDDFELPLGIFLVQLPTADDIRS--LPPINPNPISMPSN--LIETMQRI 449
Query: 437 VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
++ ++L QP NP+L+ Y L+ + ++ +D++L K
Sbjct: 450 LRGMELRS------YQPGKYNNPSLQWHYKVLQALALDEEIPTDFVDNTLPK 495
>gi|112362685|emb|CAL35969.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 278 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
S V+ + K YRYG V + S + ++ + + GF D + R+Y + +
Sbjct: 305 SVVISKDSVTKAYRYGADYVVLPSVLVDQTVYETFPGLDVRGFLDREALPRYYLTSESSF 364
Query: 338 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG-----VLTPNVSEK 390
IA+ G T+A AL M E KVA+ R V ++ + + V P + +
Sbjct: 365 IIADTRLGCLSDTMAFGALVDVMLENRKVAVARYVSKKDSEVNMCALCPILVEHPGMDSE 424
Query: 391 INIPDSFYFNVLPFAEDVREFQFPSF 416
+ S LPFAED R FP
Sbjct: 425 TKVVRSLTLCRLPFAEDERVTDFPKL 450
>gi|321252227|ref|XP_003192332.1| damaged DNA binding protein [Cryptococcus gattii WM276]
gi|317458800|gb|ADV20545.1| Damaged DNA binding protein, putative [Cryptococcus gattii WM276]
Length = 839
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 157/411 (38%), Gaps = 88/411 (21%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
E +K +++G VP+ + + + K +++LGF NI R++ + + +
Sbjct: 391 EDVVKAWKFGSTWVPVPEKTFATLATR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLL 448
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEK-------INIP 394
+ +A + SAL AM + R +W + G + + G P + K N+
Sbjct: 449 SPKAQIQFSALVEAMHD-------RKIWVLKDGGEPTL-GACVPVIENKGTDEEGRPNVL 500
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPS 445
Y+ LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 501 PYMYWLKLPFAEDERIFRFPSLATIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDLDEY 560
Query: 446 GK------------------------GEILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
+ G +P NP + R + S D P
Sbjct: 561 AREEKRKAQEDEEQDVDEQMDDQDQDGTWFKPWEAVNPVIHRIREAIFHASLTPDLDEDP 620
Query: 482 LDDSLKKITE--PDPTLLAESQSAIDAFCGQFV-IKENPKLKKSTRRFLREKPSGSDEPN 538
L ++T+ P LAE + + + IK+ P+ +K RR ++++ G DE
Sbjct: 621 LGPPHPELTKYFETPAELAEKVEDVTERLKEILDIKKVPEKRK--RRKVQKEELGEDEGF 678
Query: 539 GDGSVSDAQAVNSMESKPVVTVDK-------------------------IGDLTPIQDFE 573
D D E+KP++ + I + +PI DF+
Sbjct: 679 ID---EDELFAEPTETKPIIKPEPQSQTSSQPTTSTPIPDQNKPKSGRLISNGSPIDDFK 735
Query: 574 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 624
++ D KAI+DM + +++S N+ A++ L +R +
Sbjct: 736 RVIQVGDV---FRKAIQDMNEVVKENVKSSFSRQNFTGAIDCLKLMRSTAL 783
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 9 LLLLDVSPSMHSVLPD------VEKL------CSRLIQKKLIYGKNHEV-GVILFG---- 51
+ +DVSP M + D V KL +R IQ K++ G+ EV G++ FG
Sbjct: 11 IFAIDVSPPMGQLKADPSGSGKVSKLSLAKEYVARQIQSKILSGRKTEVIGLVSFGGRTN 70
Query: 52 --------TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
E ENEL Y V + +++ L +L +G AG+ + A++
Sbjct: 71 NQAYNISLEEGMENEL------YRAVSSDVACQTAKPKVLEVLMNLEEGKHAGNPVSALM 124
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDA 129
VG+DM I+ + T + L LITD
Sbjct: 125 VGLDM-IQSWKITKQWSVDLTLITDG 149
>gi|444317158|ref|XP_004179236.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
gi|387512276|emb|CCH59717.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
Length = 681
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 270 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
+YK+V SK + K YRYG V + + + + F + + GF D ++ RH
Sbjct: 336 DYKTVTVSSKSIS-----KVYRYGTDYVVLPTTLTDNLSFNTYPGLDITGFMDEESLPRH 390
Query: 330 YYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-- 385
Y + + +A+ G++ ++ L + E K+AI R V + + +V +L P
Sbjct: 391 YLISESTFIVADSRAGSTADMMSFEILVDVLYENKKIAIARYVQKNNTNAQMV-MLCPVL 449
Query: 386 --------------------NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+ +E++N+ + LPFAED R +FP S + +
Sbjct: 450 VDHSDILSEQDIQKYRSIHDDDNEEVNMR-GLILSRLPFAEDERVSEFPKLSNRHMKNEK 508
Query: 426 NEQQQEAADNLV 437
++ + E D+L+
Sbjct: 509 SKLEAEEIDSLM 520
>gi|242817832|ref|XP_002487024.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713489|gb|EED12913.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 661
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 119/584 (20%), Positives = 232/584 (39%), Gaps = 96/584 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 36 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 95
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD---------- 97
TE + +E GG Y H + D++V D + V+SL+ L + +
Sbjct: 96 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 155
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + ++ L +ITD+ P D T + A+ + G+
Sbjct: 156 SMANVLFCANQIFTSKASNFLSRR-LFIITDSDNPHADDR--TMRSAATVRAKDLYDLGV 212
Query: 158 -----------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ + ++ + G+P E ++ +A +
Sbjct: 213 IIELFPISRPDHEFDRSKFYDDIIYKTAPGDP------EASAFTAAGTQVPNASGDGISL 266
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPST 257
SL + +R + +F+ LE S KI V Y ++ P+ Y + P
Sbjct: 267 LNSLLSSVNSRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPEL 325
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
K T V +D ++ V + K Y++G + + ++ E ++ + +++
Sbjct: 326 AKGTTTHV--------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRI 377
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S++ +K ++ +E +T SAL + + + K+ IV + R+
Sbjct: 378 IGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNAT 437
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
V+ +L EK++ +P + LPFA+D+R Q P + V+ +P
Sbjct: 438 PVLAAMLAGE--EKLDDNGVQFLPPGLWILPLPFADDIR--QNPE-TNLVVAPEPLIDHM 492
Query: 431 EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 490
+V+ L L P + P PNPAL+ Y L+ + LD+ L +
Sbjct: 493 R---TIVQQLQL-PKAQ---YDPRKYPNPALQWHYRILQALA---------LDEELPEQA 536
Query: 491 EPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
E D T+ Q ID G +V++ +L+K ++ +P S
Sbjct: 537 E-DKTIPRYKQ--IDKRAGDYVLEWGEELEKQHQKMYTGQPKTS 577
>gi|242817824|ref|XP_002487023.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713488|gb|EED12912.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 654
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 119/584 (20%), Positives = 232/584 (39%), Gaps = 96/584 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 29 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 88
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD---------- 97
TE + +E GG Y H + D++V D + V+SL+ L + +
Sbjct: 89 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 148
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + ++ L +ITD+ P D T + A+ + G+
Sbjct: 149 SMANVLFCANQIFTSKASNFLSRR-LFIITDSDNPHADD--RTMRSAATVRAKDLYDLGV 205
Query: 158 -----------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 200
+ + ++ + G+P E ++ +A +
Sbjct: 206 IIELFPISRPDHEFDRSKFYDDIIYKTAPGDP------EASAFTAAGTQVPNASGDGISL 259
Query: 201 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPST 257
SL + +R + +F+ LE S KI V Y ++ P+ Y + P
Sbjct: 260 LNSLLSSVNSRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPEL 318
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
K T V +D ++ V + K Y++G + + ++ E ++ + +++
Sbjct: 319 AKGTTTHV--------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRI 370
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S++ +K ++ +E +T SAL + + + K+ IV + R+
Sbjct: 371 IGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNAT 430
Query: 377 SVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
V+ +L EK++ +P + LPFA+D+R Q P + V+ +P
Sbjct: 431 PVLAAMLAGE--EKLDDNGVQFLPPGLWILPLPFADDIR--QNPE-TNLVVAPEPLIDHM 485
Query: 431 EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 490
+V+ L L P + P PNPAL+ Y L+ + LD+ L +
Sbjct: 486 R---TIVQQLQL-PKAQ---YDPRKYPNPALQWHYRILQALA---------LDEELPEQA 529
Query: 491 EPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
E D T+ Q ID G +V++ +L+K ++ +P S
Sbjct: 530 E-DKTIPRYKQ--IDKRAGDYVLEWGEELEKQHQKMYTGQPKTS 570
>gi|443723956|gb|ELU12174.1| hypothetical protein CAPTEDRAFT_158558 [Capitella teleta]
Length = 553
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
Query: 209 KTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 267
K R +S V+ F G LE M + V+ +T K P +K Y K EVK
Sbjct: 202 KKRTLSRVSFSFGGALE----MAVGVYNLVRTCT-KPPAVKLY--------KKTNEEVKT 248
Query: 268 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+ + D ++V+ P+ K Y + + E +K + VKLLGF S++
Sbjct: 249 VTQ-TFLRDTAEVLMPQDMKKMQTYATKQICFEPEEITQIKKFDDPGVKLLGFKPKSSLK 307
Query: 328 RHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 386
+ ++++ L+ E +T +AL + + + VAI R RQ Q +V L P
Sbjct: 308 KMHHVRPAQFLYPDETQIKGSTTLFTALLKKCLQRDVVAICRFTARQNQPPRIVA-LVPQ 366
Query: 387 VSE----KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
E ++ + P F+ +P+A+D R +F P + + +Q + A ++VK L
Sbjct: 367 EEELDEHQVQVAPPGFHVIFMPYADDFRNLKFE--EGVP---RASTEQIDKAKSIVKKLR 421
Query: 442 LAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
PE NP+L++ Y ++E + +D P ++DS
Sbjct: 422 FT-------FSPEGMENPSLQQHYVNVEAMALDRD-QPDDINDS 457
>gi|112362691|emb|CAL35966.1| HDF2 protein [Saccharomyces mikatae]
Length = 595
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQ 429
LPFAED R FP ++ S P E++
Sbjct: 433 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKE 463
>gi|268574284|ref|XP_002642119.1| C. briggsae CBR-CKU-80 protein [Caenorhabditis briggsae]
Length = 717
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 278 SKVVPPEQRIK---GYRYGPQVVPISS----AEWEAVKFKPEKS---VKLLGFTDASNIL 327
+K + P ++IK GY +G V+ + ++ F ++ +KL+ FT +NIL
Sbjct: 291 AKNLKPVEKIKTKHGYNFGKSVIMMDQDYLKEKYNDHNFNEGQTGGVLKLIQFTKRANIL 350
Query: 328 RHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 384
Y M+ + NS AT A AL RAM +M I R + Q +V +L
Sbjct: 351 DSYLMEASAKTVLPSLNSPKSGATKAAVALIRAMFDMRVAGICRYTFHATSQVQLVALL- 409
Query: 385 PNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFS---KFPVSWQPNEQQQEAADNLVKM 439
P+ + + +Y LPF++D+R +FP F+ + +P Q A D+L+
Sbjct: 410 PHRDAETGV---YYLRSVKLPFSDDMRTLKFPKFTFDEDEEDTNKPTVAQLSAVDDLIDK 466
Query: 440 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 476
+ L S +++ ++ +P L+ H ++ H D
Sbjct: 467 MQLPESEISSLIEGGMS-DPKLQMQCHFIKSLVLHPD 502
>gi|112362687|emb|CAL35968.1| HDF2 protein [Saccharomyces mikatae]
Length = 600
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 304 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQ 429
LPFAED R FP ++ S P E++
Sbjct: 423 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKE 453
>gi|112362689|emb|CAL35967.1| HDF2 protein [Saccharomyces mikatae]
Length = 598
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQ 429
LPFAED R FP ++ S P E++
Sbjct: 433 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKE 463
>gi|358063676|ref|ZP_09150282.1| Ku protein [Clostridium hathewayi WAL-18680]
gi|356698111|gb|EHI59665.1| Ku protein [Clostridium hathewayi WAL-18680]
Length = 271
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 270 EYKSV-EDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
+YK V + K V + +KG+ + P + V ++ A++E K + +K++++L FTD +NI
Sbjct: 43 KYKKVCANCGKEVGSQDIVKGFEFAPGEYVTMTDADFEKAKTEKDKTIQILHFTDIANIR 102
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 387
Y+ K + + G+ A L RAM E KVAI + V Q ++ + L P
Sbjct: 103 PIYFDKTYHAVVEAGGDK----AYELLRRAMLEEKKVAIAKTVMGQSEKLL---CLVP-- 153
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+EK + ++ + FA++V+E K V + N+ + + A L+ +D
Sbjct: 154 TEKGILVETLF-----FADEVKE-----IPKEAVHQELNQPELDMAKMLIGSMD------ 197
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
+ +P L + +R +E K QD P
Sbjct: 198 -KPFEPSLYHDEYQKRLREIIEAKINGQDIVQAP 230
>gi|390362977|ref|XP_003730269.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Strongylocentrotus purpuratus]
Length = 325
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 25/230 (10%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
ED +++ P K YG + + E + VK + + L+GF S + +++++K
Sbjct: 31 CEDTGELLMPSDIKKYQTYGGKNIIFEKDEVDEVKKFYDPGLTLMGFKPRSALKKYFHVK 90
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--- 389
LF E S + +AL + +KVAI R + R+ V +L P E
Sbjct: 91 PAQFLFPDETSVSGSNTLFNALLQRCSARDKVAICRYIPRKNSPPKFVALL-PQKEELDE 149
Query: 390 -KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+ I P F+ LPF++D+R+ + P+ + Q + A N+VK L S
Sbjct: 150 HSVQITPPGFHLIFLPFSDDMRKLEHPTHPR------ATPDQIDKAKNVVKKLQFQFSS- 202
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 497
E NP L+ Y LE + +D D + TEP+ ++
Sbjct: 203 ------ENFENPVLQTHYRTLEALALDRDTT-----DDMVDHTEPNKEMI 241
>gi|112362693|emb|CAL35965.1| HDF2 protein [Saccharomyces mikatae]
Length = 570
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 291 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 350
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A AL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 351 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 400 NVLPFAEDVREFQFPS-FSKFPVSWQPNEQQ 429
LPFAED R FP ++ S P E++
Sbjct: 410 CRLPFAEDERVTDFPKLLNRTTTSGAPLEKE 440
>gi|50291883|ref|XP_448374.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527686|emb|CAG61335.1| unnamed protein product [Candida glabrata]
Length = 615
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
P V E K YRYG V + S+ + + ++ + + GF + S++ RH ++ +
Sbjct: 310 PPITVARESITKAYRYGTDYVVLPSSLEDQLVYQTYAGLDIRGFMNMSDMHRH-FLTSES 368
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD- 395
+F+ +S + SAL AM +++K+AI R V + V + +L P + EK N
Sbjct: 369 VFVVSSSSSADQITFSALIDAMIQIDKIAIGRYVPK-NNSDVQMCMLYPMILEKENGTHV 427
Query: 396 -SFYFNVLPFAEDVREFQFPSFSK 418
+ N LPF ED R FP ++
Sbjct: 428 RTLILNRLPFTEDERIAIFPRLTR 451
>gi|406602901|emb|CCH45565.1| hypothetical protein BN7_5147 [Wickerhamomyces ciferrii]
Length = 579
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 27/192 (14%)
Query: 277 PSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
P +V P E+ +KGY+YG V + E K+ E + + G + I R Y +
Sbjct: 289 PFEVQPIEKENLVKGYKYGKNTVVLPPTLDEKRKYLTEPGIDIRGIVSSQKIPRCYLTSE 348
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--------- 385
+ + + T A+ A A+ E++ A+ R V ++ + +V VL P
Sbjct: 349 ATIILGAKQSEADTRALGAFVDALTELDSFALARYVAKKNAEVQMV-VLIPVYIKKNGGL 407
Query: 386 -----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS----------WQPNEQQQ 430
N E + LPF ED + FPS ++ + P+++ +
Sbjct: 408 TNKRKNDDENLEDIRGLILTRLPFYEDEKIATFPSLTEVITTSGKTITENHKLLPSDEVK 467
Query: 431 EAADNLVKMLDL 442
E D+LV ++L
Sbjct: 468 ELMDDLVTTMNL 479
>gi|402589545|gb|EJW83477.1| hypothetical protein WUBG_05614 [Wuchereria bancrofti]
Length = 386
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 151/375 (40%), Gaps = 60/375 (16%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A E ++L+DV +M + + + +I +K+ + ++LFG+E T
Sbjct: 14 AARHECTVILIDVGANMSREGVETTDMQLAKDTVEWIITRKIFTESIDKFTLMLFGSEVT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKV-----VDGHLVQSLKHLPQGTCAGDFLDAIVVGVDML- 109
+N +T + + + + +Q K+ +D + P + GDFL A++ +D +
Sbjct: 74 QNPITTDENIFFYEEEMQQAKIDWLRFIDNEIK------PSKSTNGDFLAALIAALDYMR 127
Query: 110 --IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 167
++ Y E+ +++ L+T+ L D E+ V I M A + +
Sbjct: 128 NHLENYPESNITVRNILLVTN----LGGFDENVDEECVGAIINGMKALEINFSVVGPSFE 183
Query: 168 LSGEPHMRVIIENDNLLNIFSKKSS---------AKTLFVDSTTSLRGARKT-------- 210
+P +I ++ + + K S+ A+ + D T G +
Sbjct: 184 KLSKPKDEIISSEESAIKLEGKLSNTMQSFRMEPAERILTDILTQTGGVIYSFSEALPVL 243
Query: 211 -RDISPVTIFRGD---LELSEKMKIKVWVYKKTGEEKFP-TLKKYS-------------D 252
R + RG LEL K+ + +YKK F +KY+ +
Sbjct: 244 QRFVPRKVKVRGQKFYLELGIDFKLPLQMYKKIQPTDFKLATQKYASITDVQLKRKTIYE 303
Query: 253 KAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
K +K + D + PS + E+ IKGY++G +VP + + + +KPE
Sbjct: 304 KCVKDEKVDDGDDNADRVGNLSQGPSSKISKEETIKGYKFGTTIVPYNEEDQKEYGWKPE 363
Query: 313 -KSVKLLGFTDASNI 326
+ +KL+ FT S +
Sbjct: 364 NRCLKLIQFTKRSQV 378
>gi|259484104|tpe|CBF80039.1| TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AVC7] [Aspergillus
nidulans FGSC A4]
Length = 612
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 115/548 (20%), Positives = 218/548 (39%), Gaps = 81/548 (14%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K L+Q+++I +GV+L+GT+++ E+E ++ Y + + D+ + H
Sbjct: 24 KCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYLFTDLNIPSAHE 83
Query: 83 VQSLKHLPQGT-CAGDFLDAIVVGVDM--LIKKYGETYKGK------KHLCLITDALCPL 133
V L+ L Q A L+ V M L+ + + K + L ++TD P
Sbjct: 84 VLELRSLVQDEENAKKILEPSNEPVSMANLLFCVNQIFTLKAPNFLSRRLFIVTDNDNPH 143
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMK------------------NIVVRASLSGEPHMR 175
D + + A+ + G+ ++ +I+ +AS +P
Sbjct: 144 GD--NKSFRSAATVRAKDLYDLGVTIELFPISQIEHEFDTSKFYDDIIYKAS-PNDPDAP 200
Query: 176 VIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV-- 233
++ D +N S + S S R+ + LEL KI V
Sbjct: 201 AYLKPDAKMNDAQDGISLLNGLLSSINSRSVPRRAQ------FSNMSLELGPNFKISVSG 254
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
++ K E + P K T ++ +D ++ + + K Y++G
Sbjct: 255 YILFKRQESARSCYVWLGGEKPQIAKGVTTQI--------ADDSARTIEKWEIKKAYKFG 306
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVS 352
V + E +++K E ++++GF S + +K + ++ E +T S
Sbjct: 307 GDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVGSTRVFS 366
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAE 406
AL + + KVA+V + R+ S V+G + EK++ IP + LPFA+
Sbjct: 367 ALYQKLLRDQKVALVWYIARKAA-SPVLGAMMAG-EEKVDENGIQKIPPGMWIIPLPFAD 424
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYH 466
DVR Q P + V+ +P Q +++ L L P G + P+ PNP+L+ Y
Sbjct: 425 DVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPSLQWHYR 474
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
L+ + +D P D ++ K + ID G +V+ +L+K +
Sbjct: 475 ILQALALDEDVPEKPDDKTIPKYRQ------------IDKRAGGYVLDWADELEKQYAKI 522
Query: 527 LREKPSGS 534
++P +
Sbjct: 523 TADQPKST 530
>gi|350636255|gb|EHA24615.1| hypothetical protein ASPNIDRAFT_48713 [Aspergillus niger ATCC 1015]
Length = 639
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 110/544 (20%), Positives = 217/544 (39%), Gaps = 98/544 (18%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K +Q+++I +GV+LFGT+ + E+E ++ Y + + D+ V H
Sbjct: 50 KCAYHFMQQRIISNPQDMMGVLLFGTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHE 109
Query: 83 VQSLKHLPQGTCAGDFLDAIV-----VGVDMLIKKYGETYKGK------KHLCLITDALC 131
V+ L+ L GD + + V + ++ + + + + L +ITD
Sbjct: 110 VKELRALVDDE--GDSREVLSPAKEQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDN 167
Query: 132 PLKDPDVGTKEDQVSTIARQMVAFGLRMK-----------------NIVVRASLSGEPHM 174
P D T + A+ + G+ ++ + ++ SL +P
Sbjct: 168 PHGDDK--TLRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEA 225
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKV 233
+++D SK ++A + +L + +R + T F LEL +I V
Sbjct: 226 PAYLQSD------SKAATATGDGISLLNTLLSSINSRTVPRRTHFSNMPLELGPDFRISV 279
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-----VKVDYEYKSVEDPSKVVPPEQRIK 288
Y L++ +AP+ + F V S +D + V + K
Sbjct: 280 SGYI--------LLRR---QAPARNSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRK 328
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPG 343
Y++G V S E +A++ E ++++GF + + ++H Y ++ +E
Sbjct: 329 AYKFGGDQVTFSPDEQKALRDFGEPVIRVIGFKPITALPFWANVKHPYF----IYPSEED 384
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSF 397
++ SAL + + K+A+V + R+G V+ ++ EK++ P
Sbjct: 385 YVGSSRVFSALHQTLLRSKKMALVWFIARKGAGPVLAAMIA--GEEKLDENGVQKYPPGM 442
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTP 457
+ LPFA+D+R+ + + P E + +V+ L L P G + +P P
Sbjct: 443 WILPLPFADDIRQNPETTLNVAP------ESLIDQMRVVVQQLQL-PKG---VYEPLKYP 492
Query: 458 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 517
NP+L+ Y L+ + +D P D ++ K + ID G +V+
Sbjct: 493 NPSLQWHYRILQALALDEDLPEKPEDKTIPKYRQ------------IDKRAGDYVLSWAD 540
Query: 518 KLKK 521
+L+K
Sbjct: 541 ELEK 544
>gi|67901532|ref|XP_681022.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
gi|74593383|sp|Q5AVC7.1|KU70_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|40742351|gb|EAA61541.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
Length = 629
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 115/548 (20%), Positives = 218/548 (39%), Gaps = 81/548 (14%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K L+Q+++I +GV+L+GT+++ E+E ++ Y + + D+ + H
Sbjct: 41 KCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYLFTDLNIPSAHE 100
Query: 83 VQSLKHLPQGT-CAGDFLDAIVVGVDM--LIKKYGETYKGK------KHLCLITDALCPL 133
V L+ L Q A L+ V M L+ + + K + L ++TD P
Sbjct: 101 VLELRSLVQDEENAKKILEPSNEPVSMANLLFCVNQIFTLKAPNFLSRRLFIVTDNDNPH 160
Query: 134 KDPDVGTKEDQVSTIARQMVAFGLRMK------------------NIVVRASLSGEPHMR 175
D + + A+ + G+ ++ +I+ +AS +P
Sbjct: 161 GD--NKSFRSAATVRAKDLYDLGVTIELFPISQIEHEFDTSKFYDDIIYKAS-PNDPDAP 217
Query: 176 VIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV-- 233
++ D +N S + S S R+ + LEL KI V
Sbjct: 218 AYLKPDAKMNDAQDGISLLNGLLSSINSRSVPRRAQ------FSNMSLELGPNFKISVSG 271
Query: 234 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
++ K E + P K T ++ +D ++ + + K Y++G
Sbjct: 272 YILFKRQESARSCYVWLGGEKPQIAKGVTTQI--------ADDSARTIEKWEIKKAYKFG 323
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVS 352
V + E +++K E ++++GF S + +K + ++ E +T S
Sbjct: 324 GDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVGSTRVFS 383
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAE 406
AL + + KVA+V + R+ S V+G + EK++ IP + LPFA+
Sbjct: 384 ALYQKLLRDQKVALVWYIARKAA-SPVLGAMMAG-EEKVDENGIQKIPPGMWIIPLPFAD 441
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYH 466
DVR Q P + V+ +P Q +++ L L P G + P+ PNP+L+ Y
Sbjct: 442 DVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPSLQWHYR 491
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 526
L+ + +D P D ++ K + ID G +V+ +L+K +
Sbjct: 492 ILQALALDEDVPEKPDDKTIPKYRQ------------IDKRAGGYVLDWADELEKQYAKI 539
Query: 527 LREKPSGS 534
++P +
Sbjct: 540 TADQPKST 547
>gi|160934662|ref|ZP_02082048.1| hypothetical protein CLOLEP_03535 [Clostridium leptum DSM 753]
gi|156866115|gb|EDO59487.1| Ku protein [Clostridium leptum DSM 753]
Length = 269
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 35/190 (18%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+KG+ Y + V ++ ++E +K + ++S+++L FTD S+I YY K + + E G
Sbjct: 61 VKGFEYDKDKYVIVTDDDFEKIKTEKDRSIQILHFTDLSSIRPIYYDKTYHA-VPETGGD 119
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 405
+ A L +AMK+ NK+A+ + V GQ+ ++ V+ + D L +A
Sbjct: 120 K---AFELLRQAMKQENKIAVAKTVM--GQKETLLAVIPTD--------DGILIETLFYA 166
Query: 406 EDV----REFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
+++ +E+ P+ S+ ++ A L+ ++ + QPEL +
Sbjct: 167 DEIKELPKEYSHPAVSEAELAM---------AKTLINSMN-------QEFQPELYKDEYQ 210
Query: 462 ERFYHHLELK 471
ER +E K
Sbjct: 211 ERLKALIEQK 220
>gi|393221301|gb|EJD06786.1| ku70-like protein [Fomitiporia mediterranea MF3/22]
Length = 644
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 123/560 (21%), Positives = 202/560 (36%), Gaps = 107/560 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCS-------------RLIQKKLIYGKNHEVGVILFG 51
R+ +L +D S SM + D K S +L ++K++ G N G++LF
Sbjct: 28 RDIILFAIDCSESMQAFHDDSNKEGSQTSHLFAALQAAMKLQKRKVVVGPNDAAGILLFN 87
Query: 52 TEETENELTKEVGGYEH-VKVLQDIKVVDGHLVQSLKHLPQGTCAG------DF------ 98
T + + Y+ V + + +D +Q+L L +F
Sbjct: 88 TSRKSENMERGATEYKSGTFVYEPVGQIDAPKIQNLIQLLHEAKDNHKWLRYEFPPSEKQ 147
Query: 99 --LDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
L + + ++ G G K + LITD DP G K Q+ T A Q
Sbjct: 148 VPLGDVFTSCNWALRD-GMPKSGIKRIFLITDE----DDPHPGAKNAQLVTSA-QTTLLD 201
Query: 157 LRMKNIVVR-----------------ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
L + V +++ G E+D LL + + V
Sbjct: 202 LTQAGVSVEPFFISTEEKSFDPTKFYSAVLGSSLEEEAEESDGLL--------SDAISVS 253
Query: 200 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
L + R++ +F EL + I V Y E+K K + D +
Sbjct: 254 RIDDLLAQMRFREMPKRALFSIPFELGDGFVIGVKGYGLVTEQKKGHYKYFMDMGDRLEV 313
Query: 260 FATHEVKVDYEYKSVEDPSKVV------PPEQRIKGYRYGPQVVPISSAEW----EAVKF 309
+ VD + D +KV+ PP + + YG +VVP S + E F
Sbjct: 314 VEPKTLYVDENEQREIDKTKVMYGMQLGPPAEENEDEEYGVRVVPKRSKVFYTAEEVRAF 373
Query: 310 KP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIA--EPGNSRATVAVSALARAMK 359
+ +KLLGF D + + +RH +LFI E S + +AL + +K
Sbjct: 374 RTLGLSPGLKLLGFKDETELAIEDNVRH------SLFIYPDEQNYSGSKRTFTALLKTLK 427
Query: 360 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI---PDSFYFNVLPFAEDVREFQFPSF 416
+ K+ +VR + R + + E N P F+ PFA+D+R
Sbjct: 428 KKRKIGLVRALLRSNSSPMFCALCPQEEKEDENGFVEPAGFHLIPYPFADDLRA------ 481
Query: 417 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 476
+ + + + A + L + G P+ PNPAL Y LE + ++
Sbjct: 482 APIEQGVRASTDALDVAKQWISKLQIKSGG----YPPDANPNPALAFHYAQLEASAFREE 537
Query: 477 AAPPPLDDSLKKITEPDPTL 496
P D+ K DPTL
Sbjct: 538 YDP----DTFK-----DPTL 548
>gi|340505600|gb|EGR31916.1| ku70 ku80 beta-barrel domain protein [Ichthyophthirius multifiliis]
Length = 302
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 29/281 (10%)
Query: 41 KNHEVGVILFGTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
K HEVG+ILFG +++ N + G + L+++ ++ + + GD
Sbjct: 5 KQHEVGLILFGLDQSLQQGNTMYIRQMGKPDMDFLKNVMELESYS-------ENKSEGGD 57
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR-----QM 152
DA+ + + I +Y + K +K + + T A C D + ED VS I + +
Sbjct: 58 IFDALEQSL-ITIDEYVKKKKYEKKIYVFT-AGCGKTDYNSQQLEDLVSKIQQVNAKINI 115
Query: 153 VAFGLRMKNI---------VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 203
+AF K + + + + +V N LL ++ ++ F S+ +
Sbjct: 116 IAFDFLKKYNPENEDLDLELTKLNEDDDTQTKVQNLNQKLLLAIKREIPSQVQFYPSSIA 175
Query: 204 L--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 261
L + +++ +P +RG E+S +K + +Y KT E+K P LK+YS
Sbjct: 176 LLIQKQFRSKGYAPRVKYRGTFEISNFLKFDIQMYTKTSEDKLPGLKQYSQTVEFDKNEK 235
Query: 262 THEVKVDYEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISS 301
+ ++ + EDP+ + V E K Y YG Q+VP+S+
Sbjct: 236 SGLIEKEVLRYVQEDPNMQPVDKENVGKAYHYGKQLVPLSN 276
>gi|410074099|ref|XP_003954632.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
gi|372461214|emb|CCF55497.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
Length = 633
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGN 344
K YRYG + E ++ + + GF D S++ R YY+ ++FI G+
Sbjct: 320 KAYRYGSDYAVLPPPLAEKFYYETIPGLDIRGFVDESSLPR-YYLSSESVFILADTRMGS 378
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNVSEKINIPDSFYF 399
A L AM + KVAI R V ++ +V ++ T N++ K ++ +
Sbjct: 379 MADIFAFGVLVDAMYKNEKVAIARYVQKKLSDVEMVALIPLRISTENINAKSDVR-ALIL 437
Query: 400 NVLPFAEDVREFQFPSF 416
N +PFAED+R FP
Sbjct: 438 NRIPFAEDMRVSDFPKL 454
>gi|112362703|emb|CAL35960.1| HDF2 protein [Saccharomyces paradoxus]
Length = 593
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 291 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 350
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 351 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 410 CRLPFAEDERVTDFPKL 426
>gi|112362701|emb|CAL35961.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362699|emb|CAL35962.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+AI R V ++ + V + L P N++ + + S
Sbjct: 368 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 426
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFPKL 443
>gi|260805378|ref|XP_002597564.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
gi|229282829|gb|EEN53576.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
Length = 613
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 199/522 (38%), Gaps = 78/522 (14%)
Query: 5 REALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R++L+ L+D S SM S K ++ K+I VGV+ F T + +N
Sbjct: 42 RDSLIFLIDCSASMFQEEGEEDSAFHKCVKCVHSAMRNKIISNDRDLVGVVFFATNKHKN 101
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY---- 113
++HV + QD+ V ++ L+ + + F + D + +
Sbjct: 102 P-----SDFKHVYIFQDLDVPGAQMILELEEIFEEDGVERFEEEFGHSTDFSMSEVLWNC 156
Query: 114 -----GETYK-GKKHLCLITDALCPLKDPDVG--TKEDQVSTIARQMVAFGLRMKNIVVR 165
T K G K L L T+ DP G + Q T A+ + G+ + + +
Sbjct: 157 SNMFSTCTQKLGHKRLLLFTNN----DDPHAGNINLQRQAKTKAKDLEGLGINTELLHMN 212
Query: 166 ASLSGEPH--------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 217
GEP + VI E++++ + + + L S R T
Sbjct: 213 KP-GGEPFDITKFYQDIIVIPEDEDVTCLPDPAAKFEELLERQVNSEHKKR--------T 263
Query: 218 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE-D 276
+ R L L E ++ V +Y + E Y + D EV+ K+V+ +
Sbjct: 264 LARVPLSLGEGLEFGVGIYTQVRE-------TYKGRKVKLDARTNQEVRT--ITKTVDSE 314
Query: 277 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K + P K +G + + + E +K + + L+GF +++ +++++
Sbjct: 315 TGKFLMPSDIKKVQTWGGRDIAFENDEIVEMKVFDKPGLVLMGFKPRTSLKPYFHIRPAQ 374
Query: 337 -LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
LF E S +T SAL + + V I R + R+ V +L N
Sbjct: 375 FLFPDESVISGSTRLFSALLQRCLARDVVPICRYIPRKNSPPKFVALLPQKEEFDDNNMQ 434
Query: 393 -IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 451
P F+ LPFA+D+R+ F + + + Q + A ++ L
Sbjct: 435 STPAGFHVVFLPFADDLRKLNFED------TPRAKQDQVDKAKEIINKLKFK-------Y 481
Query: 452 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
P NP +++ Y +LE + +DA + + T+PD
Sbjct: 482 DPMSFENPVIQQHYRNLEALALDRDAP-----EEVYDFTQPD 518
>gi|307185845|gb|EFN71686.1| ATP-dependent DNA helicase 2 subunit 1 [Camponotus floridanus]
Length = 506
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
REA L L+D + M + P+ E KL +++++KL + +GV+LFG
Sbjct: 25 REATLFLVDATHRMFEIEKNQTQPETERSYIQKFFKLYKQILRQKLAWSMQDWMGVVLFG 84
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG----------DFLDA 101
TEE++ ++H++ LQ+++VV +Q ++ L + G DA
Sbjct: 85 TEESDAN-----SSWKHIQNLQELRVVTLDDLQRIRKLTKSGMKGYQSIKSEDAYPLHDA 139
Query: 102 IVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD 135
+ +D+ +K +T K+ + LIT + L D
Sbjct: 140 LTYAIDIFLK--IKTVLTKRRIVLITSHVAKLAD 171
>gi|154283967|ref|XP_001542779.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410959|gb|EDN06347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 599
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 35/235 (14%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQPELTPN 458
PFA+D+R+ P A D+LV ++ L K + P+ PN
Sbjct: 463 PFADDIRQ-------------NPETNLITAPDSLVDKMRTVIQLLQLPKAQ-YDPQKYPN 508
Query: 459 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 513
P+L+ Y L+ + +D P D ++ K + ID G+FVI
Sbjct: 509 PSLQWHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDKRAGEFVI 551
>gi|146182742|ref|XP_001025145.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila]
gi|146143715|gb|EAS04900.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila SB210]
Length = 727
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 297 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATVAVSA 353
V I E + +K E +KL+GF D S L+ Y+ +LFI P NS ++ A
Sbjct: 337 VRIDKDELQQIKNLEEVGMKLIGFKDKS-FLKVYFNLKPSLFIY-PDNSLVKGSSQLFDA 394
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDSFYFNVLPFAEDV 408
L + M + KVAIV+ + R+G Q + G L P + E + IP F+ LP+ ++
Sbjct: 395 LIKKMIQKEKVAIVKIINRKGGQ-LRFGCLLPQLEEYSPVDHVQIPPGFHLITLPYCGEI 453
Query: 409 REFQFPSFSK 418
P F K
Sbjct: 454 N--HLPKFVK 461
>gi|325091560|gb|EGC44870.1| Ku70 protein [Ajellomyces capsulatus H88]
Length = 655
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQPELTPN 458
PFA+D+R+ P A D+LV ++ L K + P+ PN
Sbjct: 463 PFADDIRQ-------------NPETNLITAPDSLVDKMRTVIQLLQLPKAQ-YDPQKYPN 508
Query: 459 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 518
P+L+ Y L+ + +D P D ++ K + ID G+FVI +
Sbjct: 509 PSLQWHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDNRAGEFVIAWGKE 556
Query: 519 LKKSTRRFLREKPSGS 534
L+ ++P+ S
Sbjct: 557 LESQHLMIEAKQPATS 572
>gi|225562114|gb|EEH10394.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 655
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 402
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 403 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 462
PFA+D+R+ + P S D + ++ L K + P+ PNP+L+
Sbjct: 463 PFADDIRQNPETNLITAPDS---------LVDKMRTVIQLLQLPKAQ-YDPQKYPNPSLQ 512
Query: 463 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 513
Y L+ + +D P D ++ K + ID G+FVI
Sbjct: 513 WHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDKRAGEFVI 551
>gi|349580387|dbj|GAA25547.1| K7_Yku80p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362709|emb|CAL35957.1| HDF2 protein [Saccharomyces paradoxus]
Length = 601
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 267 VDYEYKSVEDPSKV--------------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
++YE +S E+ V + E K YRYG V + S + ++
Sbjct: 263 IEYEIRSEENKKNVNEGDKLESSYIPVTISKESVTKAYRYGADYVVLPSVLVDQTVYESF 322
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCV 370
+ + GF D + R++ + + A+ G ++A SAL M E K+AI R V
Sbjct: 323 PGLDVRGFLDREALPRYFLTSESSFITADTRLGCLSDSMAFSALVDVMLENRKIAIARYV 382
Query: 371 WRQGQQSVVVGVLTPNVSEKINIPD------SFYFNVLPFAEDVREFQFPSF 416
++ + V + L P + E NI S LPFAED R FP
Sbjct: 383 SKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTLCRLPFAEDERVTDFPKL 433
>gi|261189322|ref|XP_002621072.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
gi|239591649|gb|EEQ74230.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
Length = 655
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNV 401
+T SAL + + + K+A+V V R+ V+ ++ E+I IP +
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEI-IPQGMWILP 461
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LPFA+D+R+ + P E D + ++ L K + P+ PNP+L
Sbjct: 462 LPFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSL 511
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
+ Y L+ + +D P D ++ K + D
Sbjct: 512 QWHYRILQALALDEDLPEQPEDKTIPKYRQID 543
>gi|151946262|gb|EDN64493.1| KU protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362725|emb|CAL35949.1| HDF2 protein [Saccharomyces paradoxus]
Length = 612
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|112362657|emb|CAL35983.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362661|emb|CAL35981.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362677|emb|CAL35973.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362727|emb|CAL35948.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|146162847|ref|XP_001470738.1| ku P70 DNA helicase [Tetrahymena thermophila]
gi|146146270|gb|EDK31925.1| ku P70 DNA helicase [Tetrahymena thermophila SB210]
Length = 711
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 293 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATV 349
G + V +S + +K E ++L+GF S L+ Y+ + F+ P + ++
Sbjct: 324 GGEKVKVSKGDINEIKSFEEPGMRLIGFK-PSGTLKAYHNYRTSYFVY-PDDYHVKGSSQ 381
Query: 350 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIPDSFYFNVLPFAE 406
+ AL M +K+AIVR + R+G Q +L S + + P F+ LP+A+
Sbjct: 382 SFHALISQMIAKDKIAIVRFIPRKGTQVRFCALLPQEESYDEDHVQTPPGFHLIFLPYAD 441
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KM----LDLAPSGKGEILQPELTPNP 459
D R S +P +Q++E + NL+ KM LDLA +P
Sbjct: 442 DQRNLG---------SIRP-QQKEEVSRNLLNAAKMMCNALDLAN------FDFRNFEDP 485
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
+L++F+ HL+ + ++ P D + +PD + + I F
Sbjct: 486 SLQKFFAHLQAHALQEENPENPAD-----LIQPDEEGMKRCEDIIKLF 528
>gi|50548281|ref|XP_501610.1| YALI0C08701p [Yarrowia lipolytica]
gi|74604554|sp|Q6CCK2.1|KU70_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|49647477|emb|CAG81913.1| YALI0C08701p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 52/297 (17%)
Query: 232 KVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYR 291
K WVY TG EK P K + V ++E V + R K ++
Sbjct: 266 KAWVY--TGGEK-----------PEIAKLESQAV-------TIESGRSVDKADLR-KTFK 304
Query: 292 YGPQVVPISSAEWEAVKFKPEKSVKLLGF---TDASNILRHYYMKDVNLFIAEPGNSRAT 348
+G VP + + +++ E +++LGF +D S + H + L+ + +
Sbjct: 305 FGNDYVPFTEEQLTQIRYFGEPIIRILGFHNSSDFSELFIHSVRSSMFLYPTDEKLVGSI 364
Query: 349 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDV 408
A SAL +++K +K+A+ + R+G + ++ +L P+ E + + LPF +D+
Sbjct: 365 RAFSALYQSLKNKDKMALAWVIVRKGAKP-ILALLIPSTKE----IEGLHMVFLPFTDDI 419
Query: 409 REFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 468
R Q P VS P + +A N+ L + P G + + PNP L+ Y +
Sbjct: 420 R--QEPKTEL--VSAAP--ELVDATKNIFTRLRM-PGG----FESQRYPNPRLQWHYRVV 468
Query: 469 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 525
+ ++ P D + K +ID G + + N L+ S++R
Sbjct: 469 RAMALQEEVPKVPEDKTTPKY------------RSIDTRVGDAIEEWNKVLQSSSKR 513
>gi|346325135|gb|EGX94732.1| DSB repair complex subunit Ku70, putative [Cordyceps militaris
CM01]
Length = 643
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E ++VK ++++GF +I L
Sbjct: 321 AEDSTRTVEKGEIKKAYKFGGEYVYFSPEEQKSVKDFGSPVIRIIGFKSRRSIPLWSSVK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
K ++ +E +T +AL + + +KVA+ C+ R V+ ++ P+ S+
Sbjct: 381 KSTFIYPSEEDYVGSTRVFTALWEKLLKDDKVALAWCIVRSNANPVLTAIM-PSKSQSDE 439
Query: 393 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+P + LPFA+D+R+ + P K Q ++ + +++ L L +
Sbjct: 440 YSGTPFLPAGLWLYPLPFADDLRDIKPP--GKLA---QASDDLKTQMRTIIQQLQLPKA- 493
Query: 447 KGEILQPELTPNPALERFYHHLE 469
+ P PNP+L+ Y L+
Sbjct: 494 ---MYNPTKYPNPSLQWHYKILQ 513
>gi|367008522|ref|XP_003678762.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
gi|359746419|emb|CCE89551.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
Length = 626
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 257 TDKFATHEVKVDYE-YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 315
T ++ + ++YE Y D V PE K YRYG V + S E ++ +
Sbjct: 283 TAQYEMVKTVIEYEVYDQKADKRVSVAPESIAKAYRYGSDYVVLPSTLDEQRFYRTTPGI 342
Query: 316 KLLGFTDASNILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
+ GF + + R++ + +A+ G+ V+ + L ++ E +K+ + R V +
Sbjct: 343 DIRGFLERKRLPRYFLNSESRFILADTRSGSVADIVSFNVLVDSLSEQDKLIVARFVAKP 402
Query: 374 GQQSVVVGVLTPNV--SEKINIPDSFYFNVLPFAEDVREFQFPSFS 417
+ V + ++ P + E + + N LPFAED R FP +
Sbjct: 403 NAE-VQMCMMCPMLVNDEHGDKIRTLILNRLPFAEDERVASFPRLT 447
>gi|336370987|gb|EGN99327.1| hypothetical protein SERLA73DRAFT_168812 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383742|gb|EGO24891.1| hypothetical protein SERLADRAFT_449625 [Serpula lacrymans var.
lacrymans S7.9]
Length = 647
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 105/536 (19%), Positives = 209/536 (38%), Gaps = 97/536 (18%)
Query: 5 REALLLLLDVSPSMHSVLPD----VEKLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +LL +D S SM + D K C L +KK+I G N +G++LF
Sbjct: 28 RDVILLCIDCSESMQELRDDPVYENVKTCHLLTALEAAVQIQKKKVIVGPNDSIGILLFN 87
Query: 52 T------EETENELTKEVGGYEHV------KVLQDIKVVDGH------LVQSL-----KH 88
T ++ +E+ K ++ + K+ + I+++D L Q+ K
Sbjct: 88 TTRQSDTKDHTSEIKKNTFAFQPITQISAPKIQELIQLLDAARDDPDVLKQTFPPLTGKK 147
Query: 89 LPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 148
+P G + + ++ G K + LITD P +P T
Sbjct: 148 IPMGD--------VFTSCNWFLRD-GAPKTASKRVFLITDEDNP--NPSSAQLLTSSRTT 196
Query: 149 ARQMVAFGLRMKNIVVRAS---LSGEPHMRVIIENDNLLNIFSKKSSA--KTLFVDSTTS 203
+ G++++ + ++ +DN+ + S +S +++ +
Sbjct: 197 LLDLTQSGVQVEPFFISTPDKPFDANKFYSSVLLSDNVNDEDSDESGVLPESISITRIDD 256
Query: 204 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 263
L + ++ +F E+++ + I + Y E+K + + D + +
Sbjct: 257 LLSQMRFHEVPKRALFSIPFEMAKGLVIGIKGYGLVTEQKKGAYRYFVDLGDRMEVACSR 316
Query: 264 EVKVDYEYKSVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAEW----EAVKF 309
V +D + ++ D SK+V ++ +G ++VP + E F
Sbjct: 317 TVYLDEDQQAEIDKSKIVFGMSLGVPVTDETSDVEDNGFGTRIVPAGKRPFFDADEVRSF 376
Query: 310 KP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 361
+ + +KLLGF D + ++H Y ++ E S + SAL + M
Sbjct: 377 RTLNLDPVIKLLGFKDKQELAFEDNVKHSYF----IYPDELKFSGSKRTFSALLKTMLAK 432
Query: 362 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSF 416
K+ + + R+ +L +EKI N P F+ LPFA+D+R
Sbjct: 433 GKIGLCIALTRRNASPTFCAMLPQ--AEKIEEGGWNEPPGFHVIPLPFADDIRA------ 484
Query: 417 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 472
+ ++ +++ ++AA + L + K P+ PNPAL YH+ +L++
Sbjct: 485 APLEEGYRASDKIKDAARTWIDKLCV----KNGAYPPDSYPNPALA--YHNAQLQA 534
>gi|239609039|gb|EEQ86026.1| protein Ku70 [Ajellomyces dermatitidis ER-3]
gi|327354321|gb|EGE83178.1| Ku70 [Ajellomyces dermatitidis ATCC 18188]
Length = 655
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNV 401
+T SAL + + + K+A+V V R+ V+ ++ E+I IP +
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEI-IPQGMWILP 461
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LPFA+D+R+ + P E D + ++ L K + P+ PNP+L
Sbjct: 462 LPFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSL 511
Query: 462 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
+ Y L+ + +D P D ++ K + D
Sbjct: 512 QWHYRILQALALDEDLPEQPEDKTIPKYRQID 543
>gi|58262800|ref|XP_568810.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108504|ref|XP_777203.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259888|gb|EAL22556.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223460|gb|AAW41503.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 836
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 287 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 346
+K +++G VP+ + K +++LGF NI R++ + + + + +
Sbjct: 391 VKAWKFGSTWVPVPEKTF--TTLDTSKGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 448
Query: 347 ATVAVSALARAMKEMNKVAIVRCVW---RQGQQSV-----VVGVLTPNVSEKINIPDSFY 398
A + SAL AM + R +W +G+ ++ V+ P+ K +I Y
Sbjct: 449 AQIQFSALVEAMHD-------RKIWVLKDRGEPTMGACVPVIENKGPDEEGKPSILPYMY 501
Query: 399 FNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDL 442
+ LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 502 WLKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDL 554
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 9 LLLLDVSPSMHSVLPD------VEKLC------SRLIQKKLIYGKNHEV-GVILFG---- 51
+ +DVSP M + D V KL +R IQ K++ G+ EV G++ FG
Sbjct: 11 IFAIDVSPPMGELKADPSGSGKVSKLSLAKEYVARQIQSKILSGRKTEVIGLVSFGGRTN 70
Query: 52 --------TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV 103
E ENEL Y V + ++ L +L +G AG+ + A++
Sbjct: 71 NQAYNSGLEEGMENEL------YRAVSSDVACQTAKAKALEVLMNLEEGKHAGNPVSALM 124
Query: 104 VGVDMLIKKYGETYKGKKHLCLITDA 129
VG+DM I+ + T + L LITD
Sbjct: 125 VGLDM-IQSWKVTKQWSVDLTLITDG 149
>gi|112362721|emb|CAL35951.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 363 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362717|emb|CAL35953.1| HDF2 protein [Saccharomyces paradoxus]
Length = 607
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 364
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 365 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 423
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|112362719|emb|CAL35952.1| HDF2 protein [Saccharomyces paradoxus]
Length = 608
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|48995221|gb|AAT48365.1| Ku70-like protein [Vigna radiata]
Length = 629
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
VE+P+K P Y Q + S + +K + LLGF S + +Y +K
Sbjct: 323 VENPTKQFLP--------YKSQNIIFSMEQLSEIKRISTGQLNLLGFKPLSCLRDYYNLK 374
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ L+ + G + AL R+M E+N+ A+ Q V + +
Sbjct: 375 PSSFLYPSHEGTDSSMCIFIALHRSMIELNRFAVAFSGSSSRPQLVALIAQEEVIQSGSQ 434
Query: 393 I-PDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE 449
I P + LP+++D+R E ++ S V+ ++Q + AAD L+K +DL +
Sbjct: 435 IEPPGMHMIYLPYSDDIRLVEERYSDTSGM-VTKASSDQIKRAAD-LIKRVDLKDFSVCQ 492
Query: 450 ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
I NPAL+R Y L+ + +D P D++L
Sbjct: 493 I------SNPALQRHYAVLQALALEEDDVPEMKDETL 523
>gi|112362695|emb|CAL35964.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|302667955|ref|XP_003025556.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
gi|291189670|gb|EFE44945.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
Length = 651
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQ-----PEL 455
LPFA+D+R+ P A D+L+ + P + LQ P+
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLIN--KMRPIIRPLQLQNAQYDPQR 504
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP+L+ Y L+ + +D P D + P A ++ G VI+
Sbjct: 505 YPNPSLQWHYKILQALALDEDLPEEPEDKT-------KPKYKAIDKANDMQRTGDLVIEW 557
Query: 516 NPKLKKSTRRFLREKPSGS 534
+L+ R + +P+ S
Sbjct: 558 GEELEAQYRALEKSQPATS 576
>gi|119479761|ref|XP_001259909.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
gi|119408063|gb|EAW18012.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
Length = 654
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 116/579 (20%), Positives = 235/579 (40%), Gaps = 110/579 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 28 KDAVLFAIEVSDSMLTPRPSSDPKKRVEESPTTAALKCAYHLMQQRIISNPRDMIGVLLY 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y H + D+ V V+ L+ L + G D +V
Sbjct: 88 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAREVKELRALAEDE--GKARDVLVPSK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + K + L ++TD P D ++ + A+ +
Sbjct: 146 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD--SKSQRSAATVRAKDLYDL 203
Query: 156 GLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ +I+ + S + + V +++D SK S+A
Sbjct: 204 GVTIELFPISQPEHEFDSSKFYDDIIYKTSPT-DAEAPVYLKDD------SKVSTASGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDK 253
+ L + +R + F LEL KI V Y + + P Y +
Sbjct: 257 ISLLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYL-LFKRQAPARSCYVWLGGE 315
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P K T ++ +D ++ V + K Y++G V + E +A++ +
Sbjct: 316 KPQIVKGVTTQI--------ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDP 367
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
++++GF S + ++H + ++ +E +T SAL + + + +K+A+V
Sbjct: 368 VIRIIGFKPLSALPFWANVKHPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVW 423
Query: 369 CVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 422
+ R+ V+ ++ EK++ P + LP+A+DVR Q P + V+
Sbjct: 424 FIPRKNAAPVLGAMIAGE--EKVDENGVQKFPPGMWIIPLPYADDVR--QNPEMT-LNVA 478
Query: 423 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 482
+P Q +V+ L L + +P+ PNP+L+ Y L+ + +D P
Sbjct: 479 PEPLIDQMR---TIVQQLQLPKAS----YEPQKYPNPSLQWHYRILQALALDEDLPEKPE 531
Query: 483 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 521
D ++ K + ID G++V+ +L+K
Sbjct: 532 DKTIPKYRQ------------IDKRAGEYVLSWADELEK 558
>gi|433654363|ref|YP_007298071.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292552|gb|AGB18374.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 269
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K VP E+ ++GY Y P + V I + E + K++ ++ FTD S I Y+ D
Sbjct: 52 NKEVPDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLSQIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|112362715|emb|CAL35954.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362705|emb|CAL35959.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362711|emb|CAL35956.1| HDF2 protein [Saccharomyces paradoxus]
Length = 604
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|302306501|ref|NP_982917.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|299788546|gb|AAS50741.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|374106120|gb|AEY95030.1| FABL030Wp [Ashbya gossypii FDAG1]
Length = 602
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 39/240 (16%)
Query: 213 ISPVTIFRGDLELSEKMK-------------IKVWVYKKTGEEKFPTLKKYSDKAPSTDK 259
+ PV +F G L L M+ I V Y T + ++ + + K
Sbjct: 201 VKPVRVFHGQLRLGADMRNLAGCQQDPHCLCINVEGYPAT--KAVVSMSRKQVQKTEDGK 258
Query: 260 FATHEVKVDYEYKSVEDPSKV---------VPPEQRIKGYRYGPQVVPISSAEWEAVKFK 310
+ + ++YE + +P++ VP E K YRYG V + +
Sbjct: 259 YLPLQSVIEYE---IHEPTEEDNEEYHVVPVPKEHVTKAYRYGADYVVLPELLEHERLYT 315
Query: 311 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVR 368
+ + GF D +LRH+ + +A+ G + V +AL AM K AI R
Sbjct: 316 TTPGLDIRGFIDTGKVLRHHLCSESVYIMADSREGTAADYVTFAALVDAMIAAEKFAIAR 375
Query: 369 CVWRQG---QQSVVVGVLTPNVSEKINIPD-------SFYFNVLPFAEDVREFQFPSFSK 418
V ++ Q ++ +L ++K D + LPFAED R FP K
Sbjct: 376 YVQKKDSEVQMCLLCPLLVEPSTKKRPADDDAAEAKRALVLCRLPFAEDERSSDFPPLVK 435
>gi|440801849|gb|ELR22853.1| ATPdependent DNA helicase ii, 70 kDa subunit (ku70) superfamily
protein [Acanthamoeba castellanii str. Neff]
Length = 645
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 184/493 (37%), Gaps = 131/493 (26%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--- 89
+ K+I +N VGV +GTE+ N +E + VLQ++ V D + L+ L
Sbjct: 27 LTDKIISSENDLVGVCFYGTEKKNNP-----NDFEGIYVLQELDVPDAQRIMDLEGLLPA 81
Query: 90 ----------------PQGTCAGDF--LDAIVVGVDMLIKKYGETYKGKKHLCLITDALC 131
P G C+ DF DA+ M + G K + L T+
Sbjct: 82 GHPIGSLTLAVGDDFTPFGHCSADFPFCDALWTCSTMFSNCAVKV--GHKRIFLFTNE-- 137
Query: 132 PLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKS 191
DP+ K + + R KNI+ S+
Sbjct: 138 --DDPNAANKNLREQSFQR--------AKNIIS----------------------VSEDE 165
Query: 192 SAKTLFVDSTT---SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 248
T+ D+++ LR + ++ I R L E ++I ++ GE +F +
Sbjct: 166 DTGTINFDASSKFEELRARVRRKEFKKRAINRLSLLFGEDVEIS----RRGGEAEFDVVA 221
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSK------VVPP-----------------EQ 285
+ D A + + + DP+K V+ P +
Sbjct: 222 EILDPA--------------HPCRCMRDPAKTPASQYVLHPLLKVAAAAAAAAGTLLMDS 267
Query: 286 RIK-GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPG 343
+IK + +G V E VK +K+++L+GF S + H + + ++ E
Sbjct: 268 QIKYAFPFGGAKVVFDKEEALQVKSFDKKALRLVGFKPRSAVKPHLNLSHSSFIYPDEQQ 327
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVW-RQGQQSVVVGVLTPNVSE------KINIPDS 396
+TVA +AL + +KV I C+W R+ L P E ++N P
Sbjct: 328 VQGSTVAFAALLDRLLASDKVGI--CLWTRRTNTPPRFVALVPQEEEVDDDGLQVN-PPG 384
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
F+ LPF++D+RE + + PVS +Q A LVK L + +
Sbjct: 385 FHLVPLPFSDDIREIH--TEPQPPVS----PEQVIKAKKLVKALRINFDSRS-------F 431
Query: 457 PNPALERFYHHLE 469
NP+L+R Y +L+
Sbjct: 432 ENPSLQRHYANLQ 444
>gi|112362707|emb|CAL35958.1| HDF2 protein [Saccharomyces paradoxus]
gi|112362723|emb|CAL35950.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362713|emb|CAL35955.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|295657472|ref|XP_002789304.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283934|gb|EEH39500.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 573
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKT--KLNEDGEQMIPQGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R++ + P E D + ++ L K + P+ PNP+
Sbjct: 460 PLPFADDIRQYPETNLIIAP---------DELVDKMRTVVQLLQLPKAQ-YDPQKYPNPS 509
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
L+ Y L+ + +D P D ++ K + D
Sbjct: 510 LQWHYRILQALALDEDLPEKPEDKTIPKYRQID 542
>gi|294874809|ref|XP_002767109.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239868537|gb|EEQ99826.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 675
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 358
+ S E + FK + +K + + H Y L+ E + + V AL M
Sbjct: 413 VISGSLEVIGFKSRRKLKF------QHRIGHGYF----LYPHEGRITGSKRLVEALCCRM 462
Query: 359 KEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDSFYFNVLPFAEDVREFQFPSFS 417
+ KVA VR V R Q + G L+P + E LPFA+D+R + P S
Sbjct: 463 AKREKVAFVRFVARANAQPIF-GALSPQMPDEASQTSGGLVLLPLPFADDIRSLELPGTS 521
Query: 418 KFPVSWQPNEQQQ-EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 476
V Q ++QQ EAA ++++ ++ P NP+L+ FY LE + D
Sbjct: 522 VDEVISQEEQKQQIEAAKSIIRGFRISH------WSPYSIDNPSLKLFYAGLEALALGGD 575
Query: 477 AAPPPLDDSL 486
A + D L
Sbjct: 576 LARDAVQDLL 585
>gi|406861114|gb|EKD14170.1| putative ATP-dependent DNA helicase II subunit 1 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 657
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKD 334
D S+ + + K YR+G V ++ E +KF ++++GF S + + K
Sbjct: 327 DTSRRIESSEIKKAYRFGGTQVLFTAEEQLKIKFFESPVLRIIGFKPQSMLPIWASVQKA 386
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-- 392
++ +E G + +T +AL + + + + + + R+ + ++V +L +E+I+
Sbjct: 387 TFIYPSEDGYTGSTRTFAALWQKLLKDKIMGLAWFIARKNAKPLIVAILPS--AERIDET 444
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 444
+P + LPFA+D+RE P +P + D + VK L L
Sbjct: 445 TGAQVVPQGLWLYPLPFADDIRE--------NPTKAKPFDAPDNLVDEMRKVVKQLQLPK 496
Query: 445 SGKGEILQPELTPNPALERFYHHLEL 470
+ I P NP L+ FY L++
Sbjct: 497 A----IYDPTKYSNPQLQTFYKWLQI 518
>gi|340504921|gb|EGR31314.1| ku p70 DNA helicase, putative [Ichthyophthirius multifiliis]
Length = 542
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNL 337
+++ P Q + G + V ISS + + +K E S+ L+GF S + + H Y +
Sbjct: 309 QILYPNQISQCIILGGEKVRISSKDVQKMKHFQEPSMTLIGFKPLSQLKVYHNYRPSYFV 368
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIP 394
+ + ++ AL MK NK+AIVR ++G Q +L + + + P
Sbjct: 369 YPDDFQVKGSSQFFHALITQMKAKNKIAIVRFQPKRGSQVRFCALLPQEEAYDEDHVQQP 428
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
FY LP+++D+R+ +E++ E +NL+ + + EI +
Sbjct: 429 PGFYLISLPYSDDMRDL---------TKVVQHEEKVEVNNNLINCAKMICNA-LEIHNFD 478
Query: 455 LT--PNPALERFYHHLELKS-------EHQDAAPPPLDDSLKKITE 491
+ +P L++FY HL+ + E QD P ++ +KK E
Sbjct: 479 VRNFEDPGLQKFYAHLQAHALNEISPEETQDLITPD-EEGMKKYEE 523
>gi|345560253|gb|EGX43378.1| hypothetical protein AOL_s00215g114 [Arthrobotrys oligospora ATCC
24927]
Length = 644
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
E+ ++ V P+Q K Y++G + V S E++ ++ + +++LGF + + + M+
Sbjct: 332 EETAQEVTPDQIRKAYKFGGETVSFSDEEFKKIRNFGDPVLRILGFKPQTELQFWHNMRS 391
Query: 335 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
++ +E + +T +AL + + + I + R+ V+ ++ SE+
Sbjct: 392 STFIYPSEEDYTGSTRTFAALRNKLLKDKLMGIAWFIARRNAAPVMAAIIP---SEE--- 445
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 453
P + LPF +D+R Q P + P PN D +++ L + KG I P
Sbjct: 446 PQGMFIIPLPFVDDIR--QNP---EVPHVVAPNYLIDRMQD-IIRQLHMP---KGYI--P 494
Query: 454 ELTPNPALERFYHHLE 469
E PNPAL++ Y LE
Sbjct: 495 EKYPNPALQKHYKVLE 510
>gi|50289869|ref|XP_447366.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526676|emb|CAG60303.1| unnamed protein product [Candida glabrata]
Length = 606
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 314 SVKLLGFTDASNILRHYYMKDVNLFIAEPGN--SRATVAVSALARAMKEMNKVAIVRCVW 371
S+ ++GF + N L Y D LFI N + A ++L R +K++ KV +V W
Sbjct: 371 SLTVIGFLNEDNSLVFYNNIDKTLFITPDENVIEGSFTAFASLFRTLKKLKKVGVV---W 427
Query: 372 --RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS--WQPNE 427
+ S + +L P+ + N FY +PF +++R ++P+ S ++ W+ +
Sbjct: 428 GSTKSNSSPSLYLLWPSKDDDNN--QGFYLTKVPFIDEIR--KYPTLSNININEEWEEYK 483
Query: 428 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL-------ELKSEHQDAAPP 480
+E ++ +L E + NPAL R Y L E+ + D
Sbjct: 484 NVKELTQGIISHFNLKSGYHAEEFR-----NPALNRHYKLLHDYLLQVEIPQDDNDIRDR 538
Query: 481 PL--DDSLKKITEPDPTLLAES 500
L DD+L KIT+ ++ ++
Sbjct: 539 YLREDDTLLKITKIRERIMKDT 560
>gi|167522283|ref|XP_001745479.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775828|gb|EDQ89450.1| predicted protein [Monosiga brevicollis MX1]
Length = 1236
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 125/308 (40%), Gaps = 55/308 (17%)
Query: 197 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 256
+D TTS ++ R P L+L+E M I V VY + T KYS
Sbjct: 878 LLDRTTSRVQKKRARMTIP-------LQLAEGMAIGVKVYNLVSQ---ATKGKYSYVYND 927
Query: 257 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 316
T T K Y ++ +P ++P + + G ++G ++ S E +K + ++
Sbjct: 928 TQPVVT---KTAYYCENTTNP--LLPTDMKY-GAKFGNEMAVFSKEEVTQIKSFGQPGLR 981
Query: 317 LLGFTDASNILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 374
LLGF D + + +++K + G SR + K+AI V R G
Sbjct: 982 LLGFKDQAALKPWHHVKKSCFLYPDDKAGGSRCL-----------RLRKLAICLFVSRAG 1030
Query: 375 QQSVVVGVL------TPNVSEKINIPDSFYFNVLPFAEDVRE----FQFPSFSKFPVSWQ 424
+V +L + E+++ P F+ LP+AED+RE F P
Sbjct: 1031 VPPNMVALLPQAEKVAEDSHEQVS-PPGFHVIFLPYAEDLREVNVDFDLP---------H 1080
Query: 425 PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDD 484
+ Q +AA LV+ L + Q NP+L+ ++ LE + + ++D
Sbjct: 1081 ADADQIKAATGLVRSL------THKHFQWHGVRNPSLQVHFNALEALALSRSKVEESVND 1134
Query: 485 SLKKITEP 492
+ I EP
Sbjct: 1135 LVPSIPEP 1142
>gi|198423929|ref|XP_002123200.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 233
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 352 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVL------TPNVSEKINIPDSFYFNVLPFA 405
+AL + + + VAI R V R + +L P SE+I P F+ LPFA
Sbjct: 6 TALLQKCLDKDYVAICRFVPRTSASMRNIALLPQREEIDPETSEQIK-PSGFFIVYLPFA 64
Query: 406 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFY 465
+DVRE + P P+E+Q ++A+++++ L P NPAL+ Y
Sbjct: 65 DDVRETELPE-----EQPSPSEEQVQSAESIIRKLRFK-------YDPNSFDNPALQTHY 112
Query: 466 HHLELKSEHQDAAPPPLDDSLKKITEPD 493
+LE + ++ AP P+ D T PD
Sbjct: 113 KNLEAMALEKE-APDPVTDH----TAPD 135
>gi|238495310|ref|XP_002378891.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
gi|220695541|gb|EED51884.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
Length = 655
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 123/589 (20%), Positives = 234/589 (39%), Gaps = 104/589 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 29 KDAVLFAIEVSDSMLTPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 88
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVG 105
GT+ + E+E ++ Y H + D+ V V++L+ L Q G + D L A
Sbjct: 89 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAQEVKNLRALAQDGDESKDVLKASGER 148
Query: 106 VDM--LIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTI-ARQMVAFG 156
V M ++ + + K + L ++TD P D ST+ A+ + G
Sbjct: 149 VSMANVLFCANQIFTSKAPNFFSRRLFIVTDNDDPHGD---NKSLRSASTVRAKDLYDLG 205
Query: 157 LRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+ ++ +I+ +AS S +P ++ D SK S A +
Sbjct: 206 VTIELFPISRPGHEFDTARFYDDIIYKASPS-DPDAPAYLQTD------SKASPATGDGI 258
Query: 199 DSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
+L +R + F LEL +KI V Y + +AP+
Sbjct: 259 SLLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLL-----------FKRQAPAR 307
Query: 258 DKF-----ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
+ F ++ + +D ++ + + K Y++G V + E ++++ +
Sbjct: 308 NSFIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGD 367
Query: 313 KSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
++++GF S + +K + ++ +E +T SAL + + K A+V +
Sbjct: 368 PVIRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIA 427
Query: 372 RQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
R+ S V+G + EK++ P + LPFA+DVR Q P + V+ +P
Sbjct: 428 RKNA-SPVLGAMVAG-EEKLDESGVQKFPPGMWIIPLPFADDVR--QNPE-TTLHVAPEP 482
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
Q +V+ L L + P PNP+L+ Y L+ + +D P D +
Sbjct: 483 LIDQMRY---IVQQLQLPKAS----YDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKT 535
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
L + + ID G +V+ +L+K + P +
Sbjct: 536 LPRYRQ------------IDKRTGDYVLSWADELEKQYAKISAHGPKST 572
>gi|323307743|gb|EGA61006.1| Yku80p [Saccharomyces cerevisiae FostersO]
Length = 419
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|317149552|ref|XP_003190337.1| ATP-dependent DNA helicase II subunit 1 [Aspergillus oryzae RIB40]
gi|121795552|sp|Q2MHH4.1|KU70_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|85677424|dbj|BAE78501.1| Ku70 protein [Aspergillus oryzae]
Length = 655
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 123/589 (20%), Positives = 234/589 (39%), Gaps = 104/589 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 29 KDAVLFAIEVSDSMLTPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 88
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVG 105
GT+ + E+E ++ Y H + D+ V V++L+ L Q G + D L A
Sbjct: 89 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAQEVKNLRALAQDGDESKDVLKASGER 148
Query: 106 VDM--LIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTI-ARQMVAFG 156
V M ++ + + K + L ++TD P D ST+ A+ + G
Sbjct: 149 VSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDDPHGD---NKSLRSASTVRAKDLYDLG 205
Query: 157 LRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 198
+ ++ +I+ +AS S +P ++ D SK S A +
Sbjct: 206 VTIELFPISRPGHEFDTARFYDDIIYKASPS-DPDAPAYLQTD------SKASPATGDGI 258
Query: 199 DSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 257
+L +R + F LEL +KI V Y + +AP+
Sbjct: 259 SLLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLL-----------FKRQAPAR 307
Query: 258 DKF-----ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 312
+ F ++ + +D ++ + + K Y++G V + E ++++ +
Sbjct: 308 NSFIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGD 367
Query: 313 KSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 371
++++GF S + +K + ++ +E +T SAL + + K A+V +
Sbjct: 368 PVIRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIA 427
Query: 372 RQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
R+ S V+G + EK++ P + LPFA+DVR Q P + V+ +P
Sbjct: 428 RKNA-SPVLGAMVAG-EEKLDESGVQKFPPGMWIIPLPFADDVR--QNPE-TTLHVAPEP 482
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
Q +V+ L L + P PNP+L+ Y L+ + +D P D +
Sbjct: 483 LIDQMRY---IVQQLQLPKAS----YDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKT 535
Query: 486 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
L + + ID G +V+ +L+K + P +
Sbjct: 536 LPRYRQ------------IDKRTGDYVLSWADELEKQYAKISAHGPKST 572
>gi|323347187|gb|EGA81462.1| Yku80p [Saccharomyces cerevisiae Lalvin QA23]
Length = 524
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|254749400|dbj|BAH86596.1| putative Ku70 protein [Magnaporthe grisea]
gi|440476434|gb|ELQ45031.1| hypothetical protein OOU_Y34scaffold00022g19 [Magnaporthe oryzae
Y34]
gi|440489081|gb|ELQ68761.1| hypothetical protein OOW_P131scaffold00219g18 [Magnaporthe oryzae
P131]
Length = 625
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 299 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 358
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 389
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 359 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 418
Query: 390 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 419 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 470
Query: 448 GEILQPELTPNPALERFYHHLE 469
P PNPAL+ Y L+
Sbjct: 471 --TYDPARYPNPALQWHYKILQ 490
>gi|6323753|ref|NP_013824.1| Yku80p [Saccharomyces cerevisiae S288c]
gi|2498435|sp|Q04437.1|KU80_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=High affinity DNA-binding factor subunit
2; AltName: Full=Yeast Ku80
gi|817864|emb|CAA89742.1| unknown [Saccharomyces cerevisiae]
gi|112362659|emb|CAL35982.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362663|emb|CAL35980.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362665|emb|CAL35979.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362667|emb|CAL35978.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362669|emb|CAL35977.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362673|emb|CAL35975.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362675|emb|CAL35974.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362679|emb|CAL35972.1| HDF2 protein [Saccharomyces cerevisiae]
gi|190408335|gb|EDV11600.1| yeast Ku80 protein [Saccharomyces cerevisiae RM11-1a]
gi|259148680|emb|CAY81925.1| Yku80p [Saccharomyces cerevisiae EC1118]
gi|285814108|tpg|DAA10003.1| TPA: Yku80p [Saccharomyces cerevisiae S288c]
gi|323332067|gb|EGA73478.1| Yku80p [Saccharomyces cerevisiae AWRI796]
gi|323353081|gb|EGA85381.1| Yku80p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|374708956|ref|ZP_09713390.1| hypothetical protein SinuC_01957 [Sporolactobacillus inulinus CASD]
Length = 273
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+KGY Y P Q VPIS E +++ + +K V+++ F S I YY K + FI P +
Sbjct: 61 VKGYEYAPGQFVPISEEELSSLQDETDKHVEIINFVKLSEIDPIYYEK--SYFIG-PDSG 117
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
A S L +A+++ +K+AI + R Q +
Sbjct: 118 NGLRAFSLLRQAIQDSDKIAIANIIIRSKQHLAAI 152
>gi|112362671|emb|CAL35976.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|389633665|ref|XP_003714485.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
gi|351646818|gb|EHA54678.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
Length = 644
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 332
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 318 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 377
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 389
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 378 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 437
Query: 390 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 438 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 489
Query: 448 GEILQPELTPNPALERFYHHLE 469
P PNPAL+ Y L+
Sbjct: 490 --TYDPARYPNPALQWHYKILQ 509
>gi|322695392|gb|EFY87201.1| ku70 protein [Metarhizium acridum CQMa 102]
Length = 645
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSTRTVEKGEMKKAYKFGGEYVYFTPDEQKSLRDFGPPVIRIIGFKPRKLLPIWASVK 381
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ + +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNSQPILAAIVPSRERSDDK 441
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDG-----VMQSSDELKTQMRTIVQQLQLPKA-- 494
Query: 448 GEILQPELTPNPALERFYHHLE 469
+ P PNPAL+ Y L+
Sbjct: 495 --MYNPLKYPNPALQWHYKILK 514
>gi|112362655|emb|CAL35984.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|392297267|gb|EIW08367.1| Yku80p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|366991251|ref|XP_003675391.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
gi|342301256|emb|CCC69022.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
Length = 608
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNL 337
+ P++ K + YG Q + ++ E + K E +K++GF N +R++ D L
Sbjct: 332 IKPDELCKVFPYGDQDIELNDKEVAKINDDYSKHESFLKVIGFRSTKNSIRYFNNIDKAL 391
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ--GQQSVVVGVLTPNVSEKINIPD 395
F+ P S+ + +A + + K VW + ++ + +L+P + I+ +
Sbjct: 392 FVV-PDESQYEGTIKTMASLFRVLKKRDKCMIVWGKVKSNSNLRLYILSPTTN--IDRNE 448
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE-QQQEAADNLVKMLD--LAPSGKGEILQ 452
FY +PF +++R KFP N E NLV++ + + + +
Sbjct: 449 GFYLYRIPFLDEIR--------KFPKLLDYNHITTSEDYLNLVRITENIIGYFNLKKGYR 500
Query: 453 PELTPNPALERFYHHL-------------ELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 499
P NP+L+R Y L + S+ Q + DD+L KI ++A
Sbjct: 501 PSDFKNPSLQRHYKTLHDYLLQVEQPVREDGDSDGQTSRFLKEDDTLNKILHIREKIIAS 560
Query: 500 SQS 502
+S
Sbjct: 561 KES 563
>gi|112362697|emb|CAL35963.1| HDF2 protein [Saccharomyces paradoxus]
Length = 589
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 399
++A SAL M E K+A+ R V ++ + V + L P N++ + S
Sbjct: 368 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKFVKSLTL 426
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFPKL 443
>gi|256269984|gb|EEU05234.1| Yku80p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|323336300|gb|EGA77571.1| Yku80p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|207342324|gb|EDZ70116.1| YMR106Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 523
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|365763827|gb|EHN05353.1| Yku80p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 399
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTM 433
Query: 400 NVLPFAEDVREFQFPSF 416
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|119182187|ref|XP_001242242.1| hypothetical protein CIMG_06138 [Coccidioides immitis RS]
Length = 613
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 521 KSTRRFLREKP 531
R KP
Sbjct: 556 TQNRLLENSKP 566
>gi|442570192|sp|Q1DU75.2|KU70_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|392865133|gb|EAS30893.2| ATP-dependent DNA helicase II subunit 1 [Coccidioides immitis RS]
Length = 647
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 31/251 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P ++ +E ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNIVAPEPLIDKMRE----IIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 521 KSTRRFLREKP 531
R KP
Sbjct: 556 TQNRLLENSKP 566
>gi|196015567|ref|XP_002117640.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
gi|190579809|gb|EDV19898.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
Length = 619
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 287 IKGYR-YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGN 344
IK Y+ +G + V E +K + + L+GF + + RHY+++ ++ E
Sbjct: 321 IKYYQTFGGERVIFEKEEVGEIKNFGKNGLTLMGFKPKNCVKRHYHVRPSYFIYPDESVI 380
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS----EKINI-PDSFYF 399
S +T VSAL + VAI + V R V L P K+ + P F
Sbjct: 381 SGSTRLVSALLERTLARDVVAICKFVPRFASGPKFVA-LVPQKEVLDEHKVQVVPPGFNV 439
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
LP+AED R+ K+ + P +Q + A ++VK L P+ NP
Sbjct: 440 VFLPYAEDFRQL------KYEETPAPMNEQVDKAKDIVKSLTFQ-------YNPDKFENP 486
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
AL++ Y +LE + +D +D TEPD
Sbjct: 487 ALQKHYSNLEALALDRDVPEEFID-----YTEPD 515
>gi|403216001|emb|CCK70499.1| hypothetical protein KNAG_0E02380 [Kazachstania naganishii CBS
8797]
Length = 595
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 213 ISPVTIFRGDLELSEKMKIKVWVYKKTGE-------------EKFPTLK-------KYSD 252
+ PV +F G L L + V ++ + E FP K K
Sbjct: 189 VKPVRVFSGVLRLGATLDTIVGKQEEDAQSVFEDPLSLAISVEGFPATKTVQGLNRKTMV 248
Query: 253 KAPSTD-KFATHEVKVDYEYKSVEDPSK---VVPPEQRIKGYRYGPQ--VVPISSAEWEA 306
K + D F VK EY + E+ + V + K YRYG V+P + +
Sbjct: 249 KTTTEDASFEYVPVKSVIEYTTKEESGRGAVSVSSQNVTKAYRYGADYVVLPDTIVDRSV 308
Query: 307 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGNSRATVAVSALARAMKEMNK 363
+ ++ + GF D + + RHY + ++FI + G L AM + K
Sbjct: 309 YRTGGPAAIDIRGFMDVTALPRHYLHSE-SIFILPDSRTGGVADETTFHVLVDAMLQAGK 367
Query: 364 VAIVRCVWR-QGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFP 420
+AI R V R +G + ++ S + + + LPFAED R FP + K P
Sbjct: 368 LAIARYVNRDRGSDVQMCALVALVTSTQHSSGSTLVLTRLPFAEDQRNSLFPPLTPKLP 426
>gi|402218254|gb|EJT98331.1| ku70-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 678
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 121/575 (21%), Positives = 219/575 (38%), Gaps = 120/575 (20%)
Query: 4 TREALLLLLDVSPSMHSVLPDV-------EKLCSR--------------LIQKKLIYGKN 42
+++A++L + S SMH+V ++ EK R L ++K++ G N
Sbjct: 29 SKDAIILAIQCSESMHTVREELLKSEDEDEKGKGRGRTSFEIALRSTVELQKRKVVVGPN 88
Query: 43 HEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQ------------------ 84
VG++ + T + +++ G Y H+ V +++ ++ +Q
Sbjct: 89 DSVGIVFWDTVRS-FAFSQKQGDYRHMYVYKEVGLITAESIQEQMHLLARAQEKNPTYLR 147
Query: 85 -----SLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVG 139
S +H+P D + ML + G G + L+TD DP G
Sbjct: 148 KRFQPSTEHMP-------ISDMLTACNAML--RTGAPKSGTHRIFLLTDE----DDPTAG 194
Query: 140 TKEDQVSTI---ARQMVAFGLRMKNIVVRASLSGEPHM----RVIIENDNLLNIFSKKSS 192
D+ + AR ++ +S H + E + S+
Sbjct: 195 LPADRRIKLLQSARTRAGDTYEKGWNIIPFFISTPEHTFDPSKFWREALSREGEEGGSST 254
Query: 193 AKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY-----KKTGEEKF--- 244
+ V L + R+I T+F L L+E + I + Y + G+ K+
Sbjct: 255 GEGDLVSGFEELLREMQVREIPRRTLFHVPLILAEGITIDIKGYGLVTVQSKGQYKYLAD 314
Query: 245 --PTLKKYSDKAPSTDKFATHEV-KVDYEY----------KSVEDPSKVVPPEQR---IK 288
LK+ + K DK EV K D Y + ++P +V E++ ++
Sbjct: 315 RDGMLKEATVKTTYIDKDDQGEVPKTDIRYALPFGKTWGDEQQDEPMEVDETEEKKPKMR 374
Query: 289 GYRYGPQVVP-ISSAEWEAVKFKPEK-----------SVKLLGFTDASNILRHYYMK-DV 335
G R VV + + V F PE+ S+KLLGF D + +K V
Sbjct: 375 GRRGNILVVEGVPAVTRHEVLFTPERMKELRSMVLEPSIKLLGFKDRGELTFFDNVKHSV 434
Query: 336 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 392
++ +E + +T +AL +++ + +K+ I V R+G V +L P E +
Sbjct: 435 FIYPSEDDYTGSTRTFAALLQSLIKKDKIGIALSVTRRGYTPQFVALL-PRQEELDSDTG 493
Query: 393 ---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE 449
+P + PFA+D+RE S + Q E +++AA + L +
Sbjct: 494 AQLLPPGLHMIPFPFADDIRE------SAYDQLMQCTEHEKDAALAWINKLTIRAG---- 543
Query: 450 ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDD 484
+ PNP L Y +LE + ++ P +D
Sbjct: 544 -YDADNYPNPTLRLHYKNLEAAAFNEAFDPSEFED 577
>gi|303319009|ref|XP_003069504.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109190|gb|EER27359.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320041120|gb|EFW23053.1| hypothetical protein CPSG_00952 [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 31/251 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSR 346
K Y++G + + + E A++ + ++++GF S++ + + ++ +E G
Sbjct: 340 KAYKFGGEHIAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKQSTFIYPSEAGFVG 399
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 521 KSTRRFLREKP 531
R KP
Sbjct: 556 TQKRLLENSKP 566
>gi|449542391|gb|EMD33370.1| hypothetical protein CERSUDRAFT_108161 [Ceriporiopsis subvermispora
B]
Length = 677
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 111/543 (20%), Positives = 197/543 (36%), Gaps = 107/543 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCS---------RLIQKKLIYGKNHEVGVILFG 51
++ +L +D SPSM + D + C ++ +KK+I G N VG++LF
Sbjct: 28 KDVILFCIDCSPSMQELYDDERYEDVQTCRLFTALEAAMQIQKKKVIVGPNDSVGIMLFN 87
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSL---------------KHLPQGTC 94
T NE T G + V Q I +D VQ L + P T
Sbjct: 88 TTR-RNEATAGQGAEIKKGTYVYQPIATIDAPKVQELMRLLDAVRDKPKLLSQEFPPLTE 146
Query: 95 AGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 154
+ + + + +++ G + K + LITD DP G D+++ A+ +
Sbjct: 147 SRVPMGDVFTSCNWVMRD-GASKTAVKRVFLITDE----DDPHPGPTHDRLAKSAKTTL- 200
Query: 155 FGLRMKNIVVRASLSGEPHMRVIIENDNL------------LNIFSKKSSAKTLFVDSTT 202
+++A ++ EP + E+ + N+ S + +S +
Sbjct: 201 ------EDLLQAGVTVEPFF-ISSEDKSFDPSKFYSFVLSPTNVIEDAESGGAVLPESIS 253
Query: 203 SLR-----GARKTRDISPVTIFRGDLELSEKMKIKVWVY------KKTGEEKFPTL---- 247
R + ++ F L+L+E I V Y KK E F L
Sbjct: 254 IARVEDLLSQMRFHEVPKRAFFSTRLQLAEGFVIGVKGYTPVTERKKGKHEYFYDLGDRM 313
Query: 248 --------------KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 293
Y+DK+ + +D E + E V R+
Sbjct: 314 VVAKSRSIMVDDMSHAYADKSEILSGMTLGKASMDEEKEDAEQAVGVA----RVTQANMR 369
Query: 294 PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVS 352
P + + +P +KLLGF D S + +K ++ E S + +
Sbjct: 370 PFYTQDEINSFRTMGLEP--MIKLLGFKDISELAYEDNVKHSTFIYPDEMTYSGSKRTFT 427
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEK-INIPDSFYFNVLPFAEDVR 409
AL R M K+ I + R+ +L P E + P + LPFA+D+R
Sbjct: 428 ALLRTMVRKKKIGIALGLARRNSTPTFYAMLPQLPKTDESGWDDPPGIHLIPLPFADDIR 487
Query: 410 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
++ ++Q N + ++ A + + + G P+ PNP+L YH+ +
Sbjct: 488 A------ARVERAYQANSELEKMARAWIDKITVRQGG----YPPDTYPNPSLA--YHNAQ 535
Query: 470 LKS 472
L++
Sbjct: 536 LEA 538
>gi|358394139|gb|EHK43540.1| hypothetical protein TRIATDRAFT_33616 [Trichoderma atroviride IMI
206040]
Length = 648
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY--Y 331
ED ++ V ++ K Y++G + V + E ++++ ++++GF + N++ +
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKSIRDYGPPVIRIIGFKN-RNLIPAWASV 383
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 386
K +F +E ++ SAL + + + K+ I CV R Q V+ V+ +
Sbjct: 384 KKSTFIFPSEEDYIGSSRVFSALWQKLLDSEKIGIAWCVLRSNSQPVLAAVIPSREQSDE 443
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
S +P + LP A+D+R+ +E + +V+ L+L P G
Sbjct: 444 ASGTPYLPAGLWICPLPTADDLRDISAER------GLDCSEDLKTKMRVVVQQLNL-PKG 496
Query: 447 KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 506
+ P PNPAL+ Y L+ + ++ P D +TEP AI+
Sbjct: 497 ---VYNPLKYPNPALQWHYKILQTLALDEEVPEKPED-----LTEP-------KNKAINK 541
Query: 507 FCGQFVIKENPKLKKSTRRFLREK 530
G ++ LK R R +
Sbjct: 542 RAGGYLEDWAETLKDEADRAARSR 565
>gi|13752526|gb|AAK38707.1|AF359591_1 XRCC5 [Oryzias latipes]
Length = 145
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 380 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-K 438
VG P + + + + LPF ED+R F FPS P+E Q A D+L+
Sbjct: 16 VGAAFPCIKQTY---ECLIYVQLPFMEDLRPFAFPSLENN-KKICPSETQLSAVDSLIDS 71
Query: 439 MLDLAPSGKGEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
M+ + GE+ L+P PNPA +R + L ++ + PPL+ L+ +P
Sbjct: 72 MMLVEKDENGELIDLLKPHHIPNPAFQRHFQCLHHRAVNPGTPLPPLEPWLQAKLDPSEV 131
Query: 496 LLAESQSAID 505
+ Q++++
Sbjct: 132 IKERCQASLE 141
>gi|452822798|gb|EME29814.1| ATP-dependent DNA helicase 2 subunit 1 isoform 1 [Galdieria
sulphuraria]
Length = 593
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 315 VKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 373
++L+GF + + + Y M+ L+ ++ + + ++ L + M + N++AIVR +R+
Sbjct: 312 MELIGFENKNKLKWQYNMRPSYFLYPSDHTIKGSQLLMAVLWKQMLQENQIAIVRVCFRR 371
Query: 374 GQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVR---EFQFPSFSKFPVSWQP 425
+ L P +K P F+ LPFAE++R + Q+P ++ P
Sbjct: 372 TSHPRLAA-LVPQDEKKTESHLQTEPCGFHLIWLPFAEEIRKEWKKQYPKWNNL-----P 425
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 485
++Q EAA N++ L + PS P +P ++R+Y+ L+ + +Q P ++D+
Sbjct: 426 SQQCVEAAMNVISKLSM-PS-----YDPSKYSDPDIQRYYNGLQALALNQTNF-PQVEDT 478
Query: 486 L 486
L
Sbjct: 479 L 479
>gi|254570873|ref|XP_002492546.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|238032344|emb|CAY70367.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|328353442|emb|CCA39840.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 620
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 246 TLKKYS---DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP--------EQRIKGYRYGP 294
++K YS + P KF +E +K VE S+ V P EQ IK Y G
Sbjct: 244 SVKGYSMFYHETPRKIKFVVNEGST---FKDVETKSQFVDPTSGKEFSSEQLIKAYPLGA 300
Query: 295 QV-VPISSAEWEAVKFKPE----KSVKLLGFTDASNILRHYYMKDVNLFIAEPGN----S 345
+P++S + + + + S+++LGF D SN L Y + P N +
Sbjct: 301 DAYIPLNSEQVKTINRFNDIINIPSLEILGFRDISNWLPQYQFGKASFL--SPNNYGDFT 358
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS--EKINIPDSFYFNVLP 403
+ S L ++M + +K A++ + + G++ + E N+P F+ LP
Sbjct: 359 HSQRTFSCLLQSMTKKSKFAVLFGTLKNNAAPRLFGMIPSTLPQYESCNLPQGFFLIKLP 418
Query: 404 FAEDVREF 411
+ +DVR+
Sbjct: 419 YLDDVRQL 426
>gi|326430343|gb|EGD75913.1| hypothetical protein PTSG_00622 [Salpingoeca sp. ATCC 50818]
Length = 575
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 290 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP----GNS 345
+ YG + + E + ++ + LLGF S + + Y +K + + G++
Sbjct: 275 FTYGGEKIVFDKTEVDQMRTFGSPGLLLLGFKPRSALHKEYNVKKSSFIYPDESLVGGST 334
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNV 401
R A L R ++ +++V I R + R V +L V E N +P F+
Sbjct: 335 RVFAAF--LDRCLR-LDRVPICRLIPRANSPPEFVALLPQEERVDEDGNQVVPPGFHIIT 391
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LPFAED+R + K P +P E+Q A L+K ++ E NP+L
Sbjct: 392 LPFAEDMRSLK---KKKGP---EPTEEQVGAMKKLIKSMNFTG------FSSEKFENPSL 439
Query: 462 ERFYHHLELKSEHQDAAPPPLD 483
++ Y LE + ++D P D
Sbjct: 440 QKHYSVLEALALNRDITEDPPD 461
>gi|4630797|dbj|BAA76953.1| human Ku70 autoantigen homologue [Xenopus laevis]
Length = 611
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 186/493 (37%), Gaps = 65/493 (13%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM-------LI 110
++H+ VL D+ + L + F D I G D L
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSLGEALWLC 148
Query: 111 KKYGETYKGK---KHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K K K + L T+ P DP + + + M F L + ++
Sbjct: 149 SNLFSNVKVKMSHKRIILFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHLEKPG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R I+ E+++L+ F K+S K + + ARK R +S R +L
Sbjct: 208 GFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEARK-RALS-----RLNL 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+L + + V VY + K PT++ Y + + VK S ++P
Sbjct: 260 KLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGSLLLP 311
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
+ + + YG + + + E E +K E + L+GF S + +H++ + E
Sbjct: 312 SDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEE 370
Query: 343 G-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDS 396
+ +T +AL +AI R R+ V L P E + P
Sbjct: 371 SIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQSAPSG 429
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
F LPFA+D+R+ P NE+Q + +V L + +
Sbjct: 430 FNLVCLPFADDIRKLDTPE------KITANEEQVDKMKEIVHKLRFN-------FRSDSF 476
Query: 457 PNPALERFYHHLE 469
NP L++ + +LE
Sbjct: 477 ENPVLQQHFRNLE 489
>gi|440633573|gb|ELR03492.1| hypothetical protein GMDG_01243 [Geomyces destructans 20631-21]
Length = 644
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 102/510 (20%), Positives = 194/510 (38%), Gaps = 68/510 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VSPSM + P + K +++Q+++I +G++LF
Sbjct: 31 KDAILFAIEVSPSMLTHPPASDSKKADTDSPAAAALKCAYQIMQQRIISNPKDMIGILLF 90
Query: 51 GTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL------------PQGTCAG 96
GT E++ G Y H+ +L D+ V V++LK L P A
Sbjct: 91 GTAESKGPEDNAASGIAYPHIYLLTDLDVPAASDVKALKELVEDEEAAKEVLVPAPEGAE 150
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
+ ++ + + ++ G + L +ITD DP K + + R +
Sbjct: 151 VTMSNVLFCANQIFTTRAPSF-GSRRLFMITDR----DDPHESDKGMRAAAAVRAKDLYD 205
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLN-------IFSKKSSAKTLFVDSTTSLRGARK 209
L + + G R +D + + ++A + SL
Sbjct: 206 LGVVIELFPIERGGAVFDRSKFYDDVIYRDSTDTDTPSTTNAAAGADGISLLNSLISNIN 265
Query: 210 TRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 268
++ I +F E+ + I V Y +K P Y + T + AT E
Sbjct: 266 SKQIPKRALFSNLPFEIGPGLTISVKGYNILQRQK-PARSCYVWLSGETAQIATGETT-- 322
Query: 269 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 328
D ++ V K Y++G + V + E + +K ++++GF L
Sbjct: 323 ---HLAADTTRTVQKVDVKKAYKFGGEQVLFTKDEQKELKNFGPPGLRIVGFK--PQTLL 377
Query: 329 HYYM---KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV--- 382
YY K L+ +E +T + L + + + + + + + R + +
Sbjct: 378 PYYASVNKSTFLYPSEEDYVGSTRVFATLWQKLLDSSTMGVAWYIPRANANPQYIALLPS 437
Query: 383 ---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 439
L P S++I +P + LP A+D+R P+ P+ PN + +++
Sbjct: 438 RERLDPATSQQI-VPAGLWAYPLPCADDLR---VPAPGPAPIV-SPN-ALTDKMHVVIQQ 491
Query: 440 LDLAPSGKGEILQPELTPNPALERFYHHLE 469
L L G + +P PNPAL+ Y L+
Sbjct: 492 LQL----PGAVFEPSRYPNPALQWHYRILQ 517
>gi|281203251|gb|EFA77451.1| hypothetical protein PPL_12053 [Polysphondylium pallidum PN500]
Length = 118
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
+ ++ P + A A+S+L M E+ + + R V R G+ S + +L P++ K N +
Sbjct: 1 MMVSPPADKVARSALSSLIHGMSEIKQALLSRYVKRNGR-SASISLLYPHI--KANY-EC 56
Query: 397 FYFNVLPFAEDVREFQF----PSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
Y LPF +D++++QF P+ + + P +Q +AA L+ +DL
Sbjct: 57 IYVCQLPFLDDLKQYQFSPIVPTNAATRKPFIPTAEQVDAARALIDSMDL 106
>gi|400596414|gb|EJP64188.1| ku70 protein [Beauveria bassiana ARSEF 2860]
Length = 642
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 40/299 (13%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E +++K ++++GF +I +
Sbjct: 321 AEDSTRTVEKGEMKKAYKFGGEYVYFSPEEQKSLKDFGSPIIRIIGFKSRRSIPIWSSVK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEK 390
K ++ +E +T +AL + + +KVA+ C+ R ++ ++ P E
Sbjct: 381 KSSFIYPSEEDYVGSTRVFTALWGKLLKSDKVALAWCIVRTNANPMLAAIMPSKPQSDED 440
Query: 391 IN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPFA+D+R+ + P Q ++ + +++ L L +
Sbjct: 441 SGTPYLPAGLWLYPLPFADDLRDIKPPGKMA-----QASDDLKTQMRTIIQQLQLPKA-- 493
Query: 448 GEILQPELTPNPALERFYHHL-------ELKSEHQDAAPPPLDDSLKK----ITEPDPTL 496
+ P PNP+L+ Y L E+ +DA P K+ + + TL
Sbjct: 494 --MYNPTKYPNPSLQWHYKILQALALEEEVPESAEDATLPKFKAISKRAGGYLEDWSETL 551
Query: 497 LAESQSAIDAFCGQFVIKEN----PKLKKSTRRFLREKPSGSDEPN-------GDGSVS 544
E++S +A + V +EN P+ + +P GS+ + GDGS+S
Sbjct: 552 SREAKSTTEA---RAVKRENDDELPERPAKRGKTASAQPGGSELTSAQVKAAVGDGSIS 607
>gi|168058549|ref|XP_001781270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667252|gb|EDQ53886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 606
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
+K++ Y + + + P +R + Y+ G +VV S + +K ++LLGF S
Sbjct: 295 LKIERTYICSDTGALMHEPLKRFEEYQ-GKKVV-FSVDDVSDIKRISSVQLRLLGFKSMS 352
Query: 325 NILRHYYMKDVNLFIA--EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L+ Y+ + FI E +T A AL RAM +NK A+ C+ + +V V
Sbjct: 353 -CLQPYHNLRPSTFIYPDEVAVKGSTCAFIALHRAMVRLNKYALA-CLSSRATFQLVALV 410
Query: 383 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
+ N + Y LP+++D+R + S P+S + +E+Q E A +L+K L L
Sbjct: 411 AQEEEGDSTNGMNVIY---LPYSDDIRPAEKYHTSISPIS-KASEEQVEMATDLIKKLHL 466
Query: 443 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
+I +PAL++ Y +E +D D++L
Sbjct: 467 KNFSVTDI------QDPALQKQYRIIEAVGLEEDDISEIEDETL 504
>gi|223996153|ref|XP_002287750.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976866|gb|EED95193.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1003
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 281 VPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASNILRH-YYMKDVNL 337
VP + R YR+G ++P+ + +K F +S++++G+ +++ M +
Sbjct: 427 VPLDSRTDAYRFGSDLIPVGKMDMLGIKAAFASPRSIEMIGYISKRDVISSGLCMGPAYV 486
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS- 396
+ + ++ A++AL+ AM+E R V + +GVL P +
Sbjct: 487 VLGGKESKKSRGAIAALSLAMEEKGVWGFCRFV-KSVNGDPCIGVLIPKLVGSDGGNGEG 545
Query: 397 ---FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
LPFA+D+ P+ P ++++ +A D+LV+ + L
Sbjct: 546 GRFLALLQLPFADDISHISTPA---VPAENWGDDKEAKACDSLVESMML 591
>gi|258571848|ref|XP_002544727.1| MUS51 protein [Uncinocarpus reesii 1704]
gi|237904997|gb|EEP79398.1| MUS51 protein [Uncinocarpus reesii 1704]
Length = 613
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 41/256 (16%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
K Y++G + + + E A++ + ++++GF S + +K G
Sbjct: 341 KAYKFGGEQITFTQEEQSALRNFGDPVIRIIGFRSMSLLPIWASIKQPTFIYPSEGVFVG 400
Query: 348 TVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-----IPDSFYFNV 401
+ V SAL + + + K A+V V R+ V+ ++ P E IP +
Sbjct: 401 STRVFSALQQTLLKQGKYALVWFVARKNAAPVMAAMI-PGEEELDEQGAQVIPPGMWILP 459
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLA-----PSGKGEILQPEL 455
LPFA+D+R P + A + LV KM D+ P + P+
Sbjct: 460 LPFADDIRR-------------NPETEHIVAPEPLVDKMRDVIQKLQLPKSR---YDPQK 503
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 515
PNP+L+ Y L+ + +D P D ++ K + ID G+FV+
Sbjct: 504 YPNPSLQWHYRILQALALDEDLPEQPEDKTIPKYKQ------------IDKRAGEFVVAW 551
Query: 516 NPKLKKSTRRFLREKP 531
+L+ R+ R KP
Sbjct: 552 GEELEDQYRQLDRPKP 567
>gi|307104778|gb|EFN53030.1| hypothetical protein CHLNCDRAFT_53981 [Chlorella variabilis]
Length = 658
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 33/288 (11%)
Query: 225 LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPE 284
L + +++ V +Y+ ++ P K S + K AT ++ Y +++E +
Sbjct: 280 LGKGLELAVKLYQMVQRQRIPPALKISGRTGHEVKAATAQID-KYTGEALEKDQ--ILHY 336
Query: 285 QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT-----DASNILRHYYMKDVN--- 336
KG RY P+V I+ E +K ++ + LLGF ++R +K+ +
Sbjct: 337 YFKKGNRY-PKVY-ITPEETRQIKGVGQRGMTLLGFKPIRRGSGGCVVRWCCLKEHHQTR 394
Query: 337 ----LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
++ E + + AL M+E +A+ R + + +V +L ++ +
Sbjct: 395 NSTFIYPDEKEVAGSATCFIALWDVMRETGTMAVCRVAPTKARTPTLVALLPQEETQYDD 454
Query: 393 ----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
P + LPF +D+R + + V P+E Q AA+ L+ L L G
Sbjct: 455 GSQATPPGMHLIYLPFMDDIRHPETSADFVGAVRHAPSESQVAAAEVLILELQLPAFDCG 514
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
+L NPAL+R Y LE S Q P ++DS + DPTL
Sbjct: 515 SVL------NPALQRHYEVLE--SLAQGMEPCLVEDS----SIGDPTL 550
>gi|225679444|gb|EEH17728.1| DSB repair complex subunit Ku70 [Paracoccidioides brasiliensis
Pb03]
Length = 654
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KSYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKA--KLNEYGEQMIPQGMWIL 459
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+D+R+ + P E D + ++ K + P+ PNP+
Sbjct: 460 PLPFADDIRQNPETNLIIAP---------DELVDKMRTVIQFLQLPKAQ-YDPQKYPNPS 509
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
L+ Y L+ + +D P D ++ K + ID G+ VI +L+
Sbjct: 510 LQWHYRILQALALDEDLPEKPEDKTIPKYRQ------------IDKRAGEHVIAWGEELE 557
Query: 521 KSTRRFLREKP 531
+ E+P
Sbjct: 558 SQYLKMETEQP 568
>gi|407918739|gb|EKG12005.1| DNA-binding SAP [Macrophomina phaseolina MS6]
Length = 660
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 43/318 (13%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
++ V K ED ++ V + K Y++G + V + E +A+++ + V+++GF
Sbjct: 321 QIAVAASSKIAEDTAREVQKTEIRKAYKFGGETVSFTEEETKALRYFGDPVVRIIGFKPL 380
Query: 324 SNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
S + ++ + L+ E +T SAL + + + K+AI + R+ + +
Sbjct: 381 SMLPEWANLRSAIFLYPTEADFIGSTRVFSALQQNLLQKQKMAIAWFIPRRNAVPTLAAL 440
Query: 383 L-----TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 437
+ + +E++ P + LP+ +D+R P A+D L
Sbjct: 441 IPGKEKLGDRNEQVR-PPGLWAITLPYVDDIRR-------------NPETALVRASDRLT 486
Query: 438 K-MLDLAPS---GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
M D+ + KGE P PNPAL+ FY L+ + + P D ++ K
Sbjct: 487 DIMRDIVQNLTLPKGE-YDPSRYPNPALQWFYRILQAIALEDELPDKPDDRTVPK----- 540
Query: 494 PTLLAESQSAIDAFCGQFVIKENPKLKK------STRRFLREKPSGSDEPNGDGSVSDAQ 547
I+ G+ V++ L++ + R R + +G D P S ++ +
Sbjct: 541 -------HRQINKRVGERVVEWGKALEEEYGYWTQSARKRRAEEAGEDVPGRAASATNKR 593
Query: 548 AVNSMESKPVVTVDKIGD 565
+ + P T D I D
Sbjct: 594 LKSEAGAVPSKTSDAIDD 611
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 5 REALLLLLDVSPSM-HSVLPDVEKLCSR-------------LIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM LP K R L+Q+++I N +GV+LF
Sbjct: 33 KDAVLFAIDVSHSMMKKPLPSDSKKADRDSPTSAALKCAYQLMQQRIISHPNDMMGVLLF 92
Query: 51 GTEET--ENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ 91
GTE++ ++E GG Y H +L D+ V + V+ L++L Q
Sbjct: 93 GTEQSKFQDEGANGRGGLQYPHCYLLTDLDVPAANDVKRLRNLVQ 137
>gi|333896429|ref|YP_004470303.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111694|gb|AEF16631.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 269
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V E+ +KGY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVKGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVFNDNYMVMETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|322712496|gb|EFZ04069.1| ku70 protein [Metarhizium anisopliae ARSEF 23]
Length = 646
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED + V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSIRTVEKGEMKKAYKFGGEYVCFTPDEQKSLRDFGPPVIRIIGFKPRKLLPMWASVK 381
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNAQPILAAIVPSREPSDEK 441
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDGVT-----QSSDELKTQMRTIVQQLQLPKA-- 494
Query: 448 GEILQPELTPNPALERFYHHLE 469
+ P PNPAL+ Y L+
Sbjct: 495 --MYNPLKYPNPALQWHYKILK 514
>gi|281203260|gb|EFA77460.1| hypothetical protein PPL_12062 [Polysphondylium pallidum PN500]
Length = 137
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 560 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 619
V+++G + P+Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +V +
Sbjct: 43 VNEVGLINPVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVVV 101
>gi|425774068|gb|EKV12387.1| Ku seventy [Penicillium digitatum Pd1]
gi|425776194|gb|EKV14423.1| Ku seventy [Penicillium digitatum PHI26]
Length = 653
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQISFTIEEQQALRSFGDPVIRIIGFKSLSALPIWANVKHPSFIYPSEENYIG 403
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + + K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALQQKLLDSEKLALVWFIPRKNASPVLAAMIA--GAEKIDENGVQKIPPGMWII 461
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+DVR+ + ++ + +A ++V+ L L + + +P PNP+
Sbjct: 462 PLPFADDVRQNPESTVNR------AGDALNDAMRDVVRQLQLPKA----VYEPSKYPNPS 511
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKK 488
L+ Y L+ + +D P D ++ K
Sbjct: 512 LQWHYRILQAIALDEDFPESPDDKTVPK 539
>gi|410896180|ref|XP_003961577.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 608
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 220 RGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 278
R +L L E + + V +Y K P ++K Y + T+K H ++ ++
Sbjct: 254 RLNLSLGEGLNLAVGIYAMAVPAKIPGSVKLYRE----TNK-QVHSKPQTFDTQT----G 304
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
+++ P + K YG + + + E +++K + + L+GF + H++++
Sbjct: 305 RLLLPSEIKKAQVYGKKQIVMERDEVDSIKKFEDPGLYLIGFKPIKMLKIHHHIRPAVFI 364
Query: 339 IAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE------KI 391
E + + + SAL E + A+ RC+ R+ L P E +I
Sbjct: 365 YPEENMVKGSSCLFSALLTKCSEKDVFALCRCIIRRNCPP-RFAALVPQKEELDEGKVQI 423
Query: 392 NIPDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
P F+ LP+A+D+R QFPS S+ PV
Sbjct: 424 TAP-GFHLIYLPYADDIRTLDPPQFPSASQIPV 455
>gi|317419163|emb|CBN81200.1| ATP-dependent DNA helicase 2 subunit 1 [Dicentrarchus labrax]
Length = 624
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 178/457 (38%), Gaps = 71/457 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTE+++
Sbjct: 46 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRSVYTSKIISSHRDLVALVFYGTEQSK 105
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N +++V V D+ VQ + L +G G L A +G GET
Sbjct: 106 NPRN----SFKYVYVYHDLDEPGAKRVQEVDAL-RGE-KGARLAAETMGS-------GET 152
Query: 117 YKGKKHLC---LITDALCPLK-----------DPDVG--TKEDQVSTIARQMVAFG--LR 158
G C L +D L +P G K+ Q T A + G +
Sbjct: 153 SLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHRGDSAKDRQARTKASDLKETGVIID 212
Query: 159 MKNIVVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 215
+ +++ P R I+ E+++ L + + D L+ + ++
Sbjct: 213 LMHLMKPGGFDVAPFFRDIVSQPEDESELGLHLEP-------CDKLEDLQKRVRAKEQKK 265
Query: 216 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPT-LKKYSD-KAPSTDKFATHEVKVDYEYKS 273
+ R +L L E + + V +Y + P ++ Y + P K T ++
Sbjct: 266 RAMARLNLCLGEGINVAVGIYATAVTARKPAAIRLYRETNEPVRSKTRTFHMQTG----- 320
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
S ++P E + K YG + + + E +++K + + L+GF + H++++
Sbjct: 321 ----SLLLPSEIK-KAQTYGKKQIVMERDEVDSIKKFQDPGLYLIGFKPMEKLKTHHHIR 375
Query: 334 DVNLFIAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--- 389
E G + + + SAL E N A+ RCV R+ V L P E
Sbjct: 376 PAVFLYPEEGEVKGSACLFSALLMKCSERNVFALCRCVSRRNYPPRFVA-LVPQREEVDE 434
Query: 390 -KINI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
K+ P F LP+A+D+R Q PS S+ V
Sbjct: 435 GKVQFTPPGFNVIYLPYADDLRTLDPPQCPSASQIQV 471
>gi|428174375|gb|EKX43271.1| hypothetical protein GUITHDRAFT_110686 [Guillardia theta CCMP2712]
Length = 227
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 2 ARTREALLLLLDVSPSM-HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
+ +E +++LDV M L +K S ++++ I+ + GV+L G ++ +
Sbjct: 3 GKAKEINIVILDVGRQMKEEELAIGKKFLSEFLRER-IFDPDMYAGVVLIGARGAKSFFS 61
Query: 61 KEVGG----YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDML 109
KE GG Y ++++L++++ + L++S+ +L +++D +VVG+D+L
Sbjct: 62 KEGGGDFEGYGNIRMLENVRKISSRLLESVSNLNLEQGNSNYVDGMVVGLDLL 114
>gi|148228066|ref|NP_001082274.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus laevis]
gi|50604152|gb|AAH77445.1| LOC398357 protein [Xenopus laevis]
Length = 611
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 186/493 (37%), Gaps = 65/493 (13%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDM-------LI 110
++H+ VL D+ + L + F D I G D L
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSLGEALWLC 148
Query: 111 KKYGETYKGK---KHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K K K + L T+ P DP + + + M F L + ++
Sbjct: 149 SNLFSNVKVKMSHKRIMLFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHLEKPG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R I+ E+++L+ F K+S K + + A+K R +S R +L
Sbjct: 208 GFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEAKK-RALS-----RLNL 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 282
+L + + V VY + K PT++ Y + + VK S ++P
Sbjct: 260 KLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGSLLLP 311
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
+ + + YG + + + E E +K E + L+GF S + +H++ + E
Sbjct: 312 SDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEE 370
Query: 343 G-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDS 396
+ +T +AL +AI R R+ V L P E + P
Sbjct: 371 SIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQSAPSG 429
Query: 397 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT 456
F LPFA+D+R+ P NE+Q + +V L + +
Sbjct: 430 FNLVCLPFADDIRKLDTPE------KITANEEQVDKMKEIVHKLRFN-------FRSDSF 476
Query: 457 PNPALERFYHHLE 469
NP L++ + +LE
Sbjct: 477 ENPVLQQHFRNLE 489
>gi|255949402|ref|XP_002565468.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592485|emb|CAP98839.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 658
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + V + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQVSFTIEEQQALRSFGDPVIRIIGFKPLSALPFWANVKHPSFIYPSEEDYVG 403
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 400
+T SAL + + E K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALHQKLLESEKLALVWFIPRRNASPVLAAMIA--GAEKIDENGVQKIPPGMWII 461
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 460
LPFA+DVR Q P + + + +A ++V+ L L + + P PNP+
Sbjct: 462 PLPFADDVR--QNPESTVH----RAGDALNDAMRDVVRQLQLPKA----VYDPSKYPNPS 511
Query: 461 LERFYHHLELKSEHQDAAPPPLDDSLKK 488
L+ Y L+ + +D P D ++ K
Sbjct: 512 LQWHYRILQAIALDEDFPESPDDKTVPK 539
>gi|346977166|gb|EGY20618.1| Ku70 [Verticillium dahliae VdLs.17]
Length = 646
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMK 333
ED ++ V + K Y++G + + S + + K ++++GF + I K
Sbjct: 321 EDTARTVEKSETKKAYKFGGEYIYFSPEDQKRAKDFGPPIIRIIGFKTRAQIPFWASVKK 380
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-EKIN 392
+F +E +T SAL + + + NKVAI C+ R V+ ++ + S E+ N
Sbjct: 381 STFIFPSEEDFVGSTRVFSALWQKLLKSNKVAIAWCIIRANATPVLSAIIPSHESTEESN 440
Query: 393 ----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAPS 445
+P + LPFA+D+R + +P E D + V+ L L +
Sbjct: 441 ATPFLPAGLWLCPLPFADDLRGGPATDGT------EPPRASNELVDQMRVIVQQLQLPKA 494
Query: 446 GKGEILQPELTPNPALERFYHHLE 469
+ P PNP L+ Y L+
Sbjct: 495 ----MYNPMRYPNPGLQWHYKILQ 514
>gi|121795550|sp|Q2MHH3.1|KU70_ASPSO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|85677426|dbj|BAE78502.1| Ku70 protein [Aspergillus sojae]
Length = 655
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 121/588 (20%), Positives = 234/588 (39%), Gaps = 102/588 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 29 KDAVLFAIEVSDSMLTPRPSSDSKKPAEESPTTAALKCAYHLMQQRIISNPRDMIGVLLY 88
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDFLDAIVVG 105
GT+ + E+E ++ Y H + D+ V V++L+ L Q G + D L A
Sbjct: 89 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAQEVKNLRALAQDGDESEDVLKASGER 148
Query: 106 VDM--LIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
V M ++ + + K + L ++TD P D + + A+ + G+
Sbjct: 149 VSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDDPHGD--NKSLRSAATVRAKDLYDLGV 206
Query: 158 RMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 199
++ +I+ +AS S +P ++ D SK S A +
Sbjct: 207 TIELFPISRPDHEFDTARFYDDIIYKASPS-DPDAPAYLQTD------SKASPATGDGIS 259
Query: 200 STTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 258
++L + +R + F LEL KI V Y + +AP+ +
Sbjct: 260 LLSTLLSSINSRSVPRRAQFSNIPLELGPNFKISVSGYLL-----------FKRQAPARN 308
Query: 259 KF-----ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
F ++ + +D ++ + + K Y++G V + E ++++ +
Sbjct: 309 SFIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGDP 368
Query: 314 SVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
++++GF S + +K + ++ +E +T SAL + + K A+V + R
Sbjct: 369 VIRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIAR 428
Query: 373 QGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 426
+ S V+G + EK++ P + LPFA+DVR Q P + V+ +P
Sbjct: 429 KNA-SPVLGAMVAG-EEKLDESGVQKFPPGMWIIPLPFADDVR--QNPE-TTLHVAPEPL 483
Query: 427 EQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
Q +V+ L L + P PNP+L+ Y L+ + +D P D +L
Sbjct: 484 IDQMRY---IVQQLQLPKAS----YDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTL 536
Query: 487 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 534
+ + ID G +V+ +L+K + P +
Sbjct: 537 PRYRQ------------IDKRTGDYVLSWADELEKQYAKISAHGPKST 572
>gi|348502389|ref|XP_003438750.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
1 [Oreochromis niloticus]
Length = 610
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 176/455 (38%), Gaps = 67/455 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 32 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 91
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N ++HV V D+ VQ + L +G G L A +G GET
Sbjct: 92 NPRN----SFKHVYVYHDLSEPGAKRVQEVDAL-RGE-KGAKLAAETIGS-------GET 138
Query: 117 YKGKKHLC---LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
G C L +D L + + + R G +K+ R S
Sbjct: 139 SLGDALWCCANLYSDIKLRL------SHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKE 192
Query: 174 MRVIIENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPV 216
V+I+ +L+ +I S L + D L + +++
Sbjct: 193 TGVVIDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKR 252
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSV 274
+ R +L L E + + V +Y + P ++K Y + P K T +
Sbjct: 253 ALARLNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQTG------ 306
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK- 333
S ++P E + K YG + + + E +A+K + + L+GF + H++++
Sbjct: 307 ---SLLLPSEIK-KAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRP 362
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEK 390
V L+ E ++ SAL + E N A+ R + R+ V +L N K
Sbjct: 363 AVFLYPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGK 422
Query: 391 INI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
+ I P F LPFA+D R QFPS S+ V
Sbjct: 423 VQITPPGFNVIYLPFADDFRTLDPPQFPSASQTQV 457
>gi|348502391|ref|XP_003438751.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
2 [Oreochromis niloticus]
Length = 612
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 176/455 (38%), Gaps = 67/455 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 34 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGET 116
N ++HV V D+ VQ + L +G G L A +G GET
Sbjct: 94 NPRN----SFKHVYVYHDLSEPGAKRVQEVDAL-RGE-KGAKLAAETIGS-------GET 140
Query: 117 YKGKKHLC---LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 173
G C L +D L + + + R G +K+ R S
Sbjct: 141 SLGDALWCCANLYSDIKLRL------SHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKE 194
Query: 174 MRVIIENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPV 216
V+I+ +L+ +I S L + D L + +++
Sbjct: 195 TGVVIDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKR 254
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSV 274
+ R +L L E + + V +Y + P ++K Y + P K T +
Sbjct: 255 ALARLNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQTG------ 308
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK- 333
S ++P E + K YG + + + E +A+K + + L+GF + H++++
Sbjct: 309 ---SLLLPSEIK-KAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRP 364
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEK 390
V L+ E ++ SAL + E N A+ R + R+ V +L N K
Sbjct: 365 AVFLYPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGK 424
Query: 391 INI-PDSFYFNVLPFAEDVREF---QFPSFSKFPV 421
+ I P F LPFA+D R QFPS S+ V
Sbjct: 425 VQITPPGFNVIYLPFADDFRTLDPPQFPSASQTQV 459
>gi|121535194|ref|ZP_01667009.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
gi|121306185|gb|EAX47112.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
Length = 275
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 281 VPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP EQ +KGY PQ V +++ E EA+ K +++++ F + I Y+ + L +
Sbjct: 56 VPNEQIVKGYEISPQRYVIVTTEELEALNPKASRTIEIEDFVNLDQIDPIYFEQSYYL-V 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ G +A + L +AMK+ KVAI R V R Q V +
Sbjct: 115 PDKGAGKA---YTLLLQAMKQAGKVAIARVVLRNKQYLVTI 152
>gi|308487536|ref|XP_003105963.1| CRE-CKU-80 protein [Caenorhabditis remanei]
gi|308254537|gb|EFO98489.1| CRE-CKU-80 protein [Caenorhabditis remanei]
Length = 722
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS----SAEWEAVKF 309
A S KF K YK+VE+ + + GY +G V+ + ++ F
Sbjct: 285 ADSASKFLPKNAK---NYKAVENI-------KTMHGYNFGKSVIMMDPEYLKEKYNDHNF 334
Query: 310 KPEKS---VKLLGFTDASNILRHYYMKDVNLFIAEPG----NSRATVAVSALARAMKEMN 362
++ +KL+ FT +NIL Y + D + P S AT A AL AM +
Sbjct: 335 NEGQTGGVLKLIQFTKKANILDSY-LADASAKTVLPSLNSPTSGATKATVALIEAMLSLR 393
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFS--- 417
AI R + +V +L P+ E + Y LPF++D+R +FP FS
Sbjct: 394 VAAICRYTFHAKSHVQIVALL-PHRDEDTGV---VYLRSVKLPFSDDMRTLKFPKFSFDE 449
Query: 418 KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
S +P Q D+L+ + L + +++ ++ +P L+ H L+
Sbjct: 450 DEVDSNKPTVAQLSVVDDLIDCMQLEETVISSLVEGGMS-DPKLQMQCHFLK 500
>gi|156061149|ref|XP_001596497.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980]
gi|154700121|gb|EDN99859.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 645
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
++ V + ED ++V+ + K Y++G V + E + +K ++++GF
Sbjct: 311 QIPVGETTQMAEDSARVIQKTEIKKAYKFGGAQVLFTPDEQKELKNFGPSGLRIIGFKPQ 370
Query: 324 SNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
S +L ++ + FI +E G +T SAL + + NK+ + + R+ +V
Sbjct: 371 S-MLPYWASVHKSTFIYPSENGYVGSTRVFSALWEKLLKDNKMGLGWYIARKDANPAIVA 429
Query: 382 VL------TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 435
+L P +++I P + LPFA+D+R P P + DN
Sbjct: 430 ILPSVEKFDPATNQQI-FPAGLWLYPLPFADDLRSVSAPG---------PIIAPDKLIDN 479
Query: 436 LVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 495
+ ++ K + P PNP+L+ Y L+ + +D P D ++ K +
Sbjct: 480 MRIIIQQLQLPKAQ-YDPRNYPNPSLQWHYKILQALALEEDIPDVPEDKTIPKYRQ---- 534
Query: 496 LLAESQSAIDAFCGQFV 512
I CG+++
Sbjct: 535 --------IHKRCGEYI 543
>gi|395326731|gb|EJF59137.1| ku70-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 657
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 37/253 (14%)
Query: 312 EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 366
E +KLLGF + ++H + ++ E S + +AL R M K+AI
Sbjct: 391 EPGIKLLGFKGRKELAFEDNIKHSFF----IYPDEMTFSGSKRTFTALLRTMISKKKIAI 446
Query: 367 VRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQFPSFSKFPV 421
V + R+ + +L EK++ P F+ LPFA+D+R +
Sbjct: 447 VLALTRRNSSPIFCAMLPQE--EKVDESGWREPPGFHLIPLPFADDIRA------APVER 498
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 481
+++ +++ +EAA + L++ K P+ PNPAL LE ++ +D
Sbjct: 499 AFRASDELKEAARKWIDKLNV----KNGSYPPDSYPNPALAYHNAQLEAQAFREDFDAEA 554
Query: 482 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 541
+D +TEP ++ + GQ + +L++ + P + D
Sbjct: 555 FED----LTEPKYDMIHKR-------AGQLIKAWKEELREDESANIVSAPLAGSKRKADV 603
Query: 542 SVSDAQAVNSMES 554
SV +A+ + E+
Sbjct: 604 SVDEAEVRSKYEA 616
>gi|390934412|ref|YP_006391917.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569913|gb|AFK86318.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 269
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V E+ ++GY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DRT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSRQDLACIRVFNDNYMVMETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|453085294|gb|EMF13337.1| DSB repair complex subunit Ku70 [Mycosphaerella populorum SO2202]
Length = 675
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 22/259 (8%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
ED ++ V + + Y++G + V S + + E +++++GF S +L + D
Sbjct: 346 EDTARTVEKTEIRRAYKFGGETVSFSLEDMAKINDWGEPTIRIIGFKPLS-MLPVWATVD 404
Query: 335 VNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI- 391
+ FI +E +T SAL + + K+A+ + R+ S + L P E+
Sbjct: 405 KSTFIYPSEESFIGSTRVFSALHQKLLRDQKIALAWYIPRRN-ASPRLAALIPGEEERNE 463
Query: 392 ----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
++P + LPFA+D+R + K P ++ +A +V+ L L +
Sbjct: 464 EGEQHMPPGIWIKPLPFADDIRANPDVNLVKAP------DEVVDAMRLIVQQLQLPKA-- 515
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL---KKITEPDPTLLAESQSAI 504
+ P PNPAL+ F+ L+ + +D P D +L K+I + E +
Sbjct: 516 --VYDPLKYPNPALQWFFRILQALALDEDLPEHPEDKTLPRWKQIHRRAGWYIVEWGEKL 573
Query: 505 DAFCGQFVIKENPKLKKST 523
DA Q++ + +K +T
Sbjct: 574 DAAFNQWLAENAASIKPAT 592
>gi|296133062|ref|YP_003640309.1| Ku protein [Thermincola potens JR]
gi|296031640|gb|ADG82408.1| Ku protein [Thermincola potens JR]
Length = 281
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 264 EVKVDYEYKSVEDPSK----------VVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPE 312
+VK +Y ++ + P K VPPE+ ++GY Y + V + ++E + +
Sbjct: 28 DVKFNYLHEKCKTPIKYERICPTCDTTVPPEEIVRGYEYEKGRYVILRDEDFEKLPLETA 87
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
+S+ ++ F + I Y+ D + ++A PG+ A L AMKE NK+AI + V R
Sbjct: 88 RSIDIIDFVELEEIDPIYF--DKSYYLA-PGDG-GQKAYELLKSAMKEANKIAIAKVVIR 143
Query: 373 QGQQSVVVGV 382
+ V + V
Sbjct: 144 SKEAIVALRV 153
>gi|304316199|ref|YP_003851344.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777701|gb|ADL68260.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 269
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
++ V E+ ++GY Y P + V I + E + K++ +L FTD + I Y+ D
Sbjct: 52 NRQVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDILDFTDLNKIDPIYF--DKT 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 394
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 395 DSF 397
D
Sbjct: 168 DEI 170
>gi|6225597|sp|Q26228.1|KU70_RHIAP RecName: Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II 70 kDa subunit;
AltName: Full=ATP-dependent DNA helicase II subunit
Ku70; AltName: Full=Ku autoantigen protein p70 homolog
gi|1063592|gb|AAC41612.1| ku autoantigen p70 homologue [Rhipicephalus appendiculatus]
gi|1587652|prf||2207188A DNA helicase II:SUBUNIT=70kD
Length = 600
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 182/480 (37%), Gaps = 55/480 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--------KHLPQGTCAG 96
VG+ILFGT++ N +++V VLQD++ V L K Q G
Sbjct: 72 VGIILFGTDKDNNP-----NRFKNVYVLQDLESPGAESVLKLEKLIADGPKKFKQEYGHG 126
Query: 97 DFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 156
+ A V+ L+ + ++ G++ + ++T+ P K G +D+ A+ ++ G
Sbjct: 127 NVNMADVLWTCALM--FSKSRAGQRRVLVLTNQDDPHKGS--GDLDDKAVVKAKDLLQSG 182
Query: 157 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 216
+ + +V G+ R I NL+ D L + +D
Sbjct: 183 IELD--LVHLKPPGDKKFRPQILYKNLVTDKENYEDGFPEASDKMEELLLRVRMKDHKKR 240
Query: 217 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--THEVKVDYEYKSV 274
+ L ++K+ V +Y PT K P+T + A +E +
Sbjct: 241 RLMSLPFWLGPEVKMSVSLYNLVR----PTGK------PATTRLARDNNEELLSRRITYA 290
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
D ++ + P K YG + E + +K ++LLGF S + + +++
Sbjct: 291 MDSAEALMPGDISKTQEYGGRKAYFDICEVKQIKSMAPPGLQLLGFKPLSYLEKQPHVRP 350
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEKIN 392
+ + G+ R + + A ++VA + C W R Q +V +L +
Sbjct: 351 SHFVYPDEGSVRGSTRLFAALLQSCLRHRVAPI-CFWISRAAQAPKLVYLLAQEEERDPH 409
Query: 393 ----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
+P F+ LPF++D R Q E +A LV +
Sbjct: 410 GLQMVPPGFHVVQLPFSDDRRRLQ-----------ALQEGTTKATPGLVALAREMAEKLR 458
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD-PTLLAESQSAIDAF 507
P+ NP L+ F+ LE + +D A P D T PD + A++ +DAF
Sbjct: 459 FTYHPDKFENPELQGFWSCLEALALDRDDAEHPKD-----YTRPDHEKMKAKAGEEMDAF 513
>gi|333370783|ref|ZP_08462761.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
gi|332977070|gb|EGK13874.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
Length = 270
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP E+ +KGY Y Q V + E EA+ + K++++L F I YY K L
Sbjct: 55 VPWEEVVKGYEYADNQFVLMKKEELEAILPENRKAIEILDFVKLEEIDPIYYDKSYYLGP 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN-VSEKINIPD 395
E GN A S L AM E K+ + + R Q VV V V E I PD
Sbjct: 115 GEHGNH----AYSLLRDAMAETGKIGVAKITIRSKQSLAVVRVHQSCLVMETIFYPD 167
>gi|339444943|ref|YP_004710947.1| hypothetical protein EGYY_13950 [Eggerthella sp. YY7918]
gi|338904695|dbj|BAK44546.1| uncharacterized ACR [Eggerthella sp. YY7918]
Length = 283
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 272 KSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
K+ D + + P+ +KGY+Y G VV IS E +++K + ++SVK++ F+D S +
Sbjct: 45 KTCPDCKRELGPDDIVKGYQYEKGKYVV-ISDDELDSLKTEADRSVKIVQFSDLSEVPPL 103
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
Y+ K + +A+ G + A+ L RAM E K+AI V
Sbjct: 104 YFEKPYQV-VAQSGGEK---ALELLHRAMAEEGKIAIGTTV 140
>gi|365991283|ref|XP_003672470.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
gi|343771246|emb|CCD27227.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
Length = 620
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 25/230 (10%)
Query: 284 EQRIKGYRYGPQVVPISSAEWEAVKFK---PEKSVKLLGFTDASNILRHYYMKDVNLFIA 340
++ +K + YG + ++ E V+ + PE +K++GF + L ++ F+
Sbjct: 351 DEYVKIFPYGDMNIELNDKEVYKVEEEISCPEAFLKIIGFRSKNQCLYYFNNITATTFVV 410
Query: 341 EPGNSRATVAVSALA---RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
P S+ ++ +A R +K+ +KVAI+ + + + +L P + N + F
Sbjct: 411 -PDESQYEGSIRTMASLFRTLKKKDKVAIIWGKMKTNSKPCLY-LLCPTSNSDRN--EGF 466
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQP 453
Y +PF E++R +FP + + NL+ K+++ G I P
Sbjct: 467 YLYRMPFLEEIR--KFPKLLDY-----KDRSSNPDYTNLIKITSKIVEYFHLRNGYI--P 517
Query: 454 ELTPNPALERFYH--HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 501
NP+L+RFY H L Q A ++K+ E D TL SQ
Sbjct: 518 SEFENPSLQRFYRVLHDYLLQVEQSMAEGDEQHQIQKLLEEDDTLRKISQ 567
>gi|449502267|ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU70-like [Cucumis sativus]
Length = 625
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
D + +K + + + + + P +R + Y+ QV+ S E +K ++L
Sbjct: 299 DSISNRPLKTERSFICADTGALFLEPSKRFQLYKN--QVIKFSGEELSEIKRVSAGHLQL 356
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF S + ++ ++ L+ ++ G S +T AL R+M ++N+ A+ Q
Sbjct: 357 LGFKPLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQ 416
Query: 377 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAAD 434
V + ++ + P LP+A+D+R + P ++ + + Q + A
Sbjct: 417 LVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVE--ELHPNPDIAPRATDDQVKKAA 474
Query: 435 NLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
L+K +DL + NPAL+R Y L+ + +D P D+++
Sbjct: 475 ALMKRIDLKDFSVCQF------ANPALQRHYAVLQALALEEDEMPEVNDETV 520
>gi|449468754|ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
sativus]
Length = 625
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 317
D + +K + + + + + P +R + Y+ QV+ S E +K ++L
Sbjct: 299 DSISNRPLKTERSFICADTGALFLEPSKRFQLYKN--QVIKFSGEELSEIKRVSAGHLQL 356
Query: 318 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
LGF S + ++ ++ L+ ++ G S +T AL R+M ++N+ A+ Q
Sbjct: 357 LGFKPLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQ 416
Query: 377 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAAD 434
V + ++ + P LP+A+D+R + P ++ + + Q + A
Sbjct: 417 LVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVE--ELHPNPDIAPRATDDQVKKAA 474
Query: 435 NLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
L+K +DL + NPAL+R Y L+ + +D P D+++
Sbjct: 475 ALMKRIDLKDFSVCQF------ANPALQRHYAVLQALALEEDEMPEVNDETV 520
>gi|317490488|ref|ZP_07948969.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325831541|ref|ZP_08164795.1| Ku protein [Eggerthella sp. HGA1]
gi|316910426|gb|EFV32054.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325486795|gb|EGC89243.1| Ku protein [Eggerthella sp. HGA1]
Length = 274
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 309
D A ++ A +K K+ D + + PE +KGY+Y G VV + E +A+K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDAIKT 83
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAIGTT 139
Query: 370 VW 371
V
Sbjct: 140 VL 141
>gi|358342906|dbj|GAA53379.1| cystathionine beta-synthase [Clonorchis sinensis]
Length = 1905
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 169 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEK 228
+G P +V + +++S+ + F ++ +L +TR ++ ++ D ++ +
Sbjct: 1679 NGNPQFKVHSAQKAIGDLWSQLNGESYTFDEAIPAL-AYFETRAVTQRG-WKVDFQIGDS 1736
Query: 229 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK 288
+ + V + + E + PTL + PST ++ Y + ++ + Q I+
Sbjct: 1737 LSLPVEGFTQVREARPPTLTQLYAACPST------PIRAITTYCTQDENVTELQSTQIIR 1790
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
G+RYG +VP + + V+ EK L+GFT AS +
Sbjct: 1791 GHRYGNTMVPFTPEDKAVVQPAAEKCRTLIGFTPASTFI 1829
>gi|335428738|ref|ZP_08555648.1| Ku protein [Haloplasma contractile SSD-17B]
gi|335430878|ref|ZP_08557764.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334887418|gb|EGM25750.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334891679|gb|EGM29925.1| Ku protein [Haloplasma contractile SSD-17B]
Length = 255
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 287 IKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
IKGY+Y + + ++E +K +K+++++ F DAS I YY D + ++ G
Sbjct: 61 IKGYQYEDNKYITFDDDDFEKIKSNRDKTIQIMQFVDASEIDSIYY--DKSYYVVPEGGE 118
Query: 346 RATVAVSALARAMKEMNKVAIVRCV 370
+ A L RA+ E NKV I + V
Sbjct: 119 K---AFEVLRRALSESNKVGIAKAV 140
>gi|298707354|emb|CBJ29998.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 540
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 85/208 (40%), Gaps = 30/208 (14%)
Query: 299 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN------LFIAEPGNSRATVAVS 352
IS E +K K + LLGF +N LR D N L+ E + + A
Sbjct: 244 ISKDEMGTLKGLYPKGLTLLGFR-PNNTLR----PDFNIRSPYFLYPDEESTTGSAKAFI 298
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNVLPFAED 407
AL AM + A+ R G +V L P E++ P F VLPFA++
Sbjct: 299 ALHAAMVDKRVYALARFTRAAGAAPRMV-ALRPQEEVVEDGEQLQ-PGGFNTVVLPFADE 356
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 467
VRE + P S V + NE AA+ +VK L L E NP L+R Y
Sbjct: 357 VREAKAPQTSDGDVKAEVNEGGVSAAEGVVKALKL------ESFDFRKFENPVLQRHYAA 410
Query: 468 LE--LKSEHQDAAPPPLDDSLKKITEPD 493
L+ SE + + P DD T PD
Sbjct: 411 LQALALSEEEISWDPEKDDR----TRPD 434
>gi|353240017|emb|CCA71905.1| related to ATP-dependent DNA helicase II, 70 kDa subunit
[Piriformospora indica DSM 11827]
Length = 679
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 295 QVVPISSAEWEAVKFKP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSR 346
Q PI + + KF+ E +K+LGF DA + ++H Y L+ +
Sbjct: 392 QKTPIYYTKEDVTKFRTLGMEPGIKILGFKDADTLVFEDNIKHSYF----LYPNDTVYKG 447
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG------VLTPNVSEKINIPDSFYFN 400
+T A AL AM K+ + ++R+ VL + +++ P F+
Sbjct: 448 STAAFGALMSAMVTKGKIGLALGLFRRNSSPYFYAMVPQEEVLDEDGAQER--PPGFHMI 505
Query: 401 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM----LDLAPSGKGEILQPELT 456
LPFA+D+R + E A+DNLV+ + KG + P+
Sbjct: 506 PLPFADDIR-----------AAPDAAESSLRASDNLVQAAAAWIKKVRIQKGYV--PDAY 552
Query: 457 PNPALERFYHHLE 469
PNP L FY L+
Sbjct: 553 PNPTLGLFYSQLQ 565
>gi|17552754|ref|NP_497899.1| Protein CKU-80 [Caenorhabditis elegans]
gi|3878947|emb|CAA83623.1| Protein CKU-80 [Caenorhabditis elegans]
Length = 728
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 289 GYRYGPQVVPISSAEWEAVKFKPEK--------SVKLLGFTDASNILRHYYMKDVNLFIA 340
GY +G V+ + E+ K+ +KL+ FT +NIL Y + D +
Sbjct: 318 GYNFGKSVI-MMDPEYLKEKYNDHNFNEGQTGGVLKLIQFTKRANILDSYLL-DASAKTV 375
Query: 341 EPG----NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 396
P S AT A +L AM + AI R + ++ +L P+ E+ +
Sbjct: 376 LPALNSPKSGATKATVSLIEAMLSLRVAAICRYTFHAKSHVQLIALL-PHQDEETGV--- 431
Query: 397 FYFNV--LPFAEDVREFQFPSFS---KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 451
FY LPF++D+R +FP FS + +P Q A D+L+ + L ++
Sbjct: 432 FYLRSVKLPFSDDMRTLKFPKFSFDEEDEDLNKPTVAQLSAVDDLIDCMQLQEDEISSLV 491
Query: 452 QPELTPNPALERFYHHL 468
+ ++ +P L+ H L
Sbjct: 492 EGGMS-DPKLQMQCHFL 507
>gi|429862115|gb|ELA36774.1| ku70 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 649
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V ++ E +++K ++++GF S +
Sbjct: 324 AEDSARTVEKPEFKKAYKFGGEYVHFTTEEQKSLKDFGTPIIRIIGFKPRSMLPFWASVK 383
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + K+ + + R ++V ++ + +
Sbjct: 384 KSTFIFPSEEDYVGSTRVFTALWQKLLKYKKIGVAWAITRSNANPILVAIIPSHEQSEDD 443
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPFA+D+RE P + + +Q + +V+ L L +
Sbjct: 444 STTPYLPAGLWLTPLPFADDLREGPEPPADLVRSTNELTDQMRV----IVQQLQLPKA-- 497
Query: 448 GEILQPELTPNPALERFYHHLEL 470
+ P+ PNP+L+ Y L++
Sbjct: 498 --MYNPKKYPNPSLQWHYKILQV 518
>gi|393242090|gb|EJD49609.1| Ku DNA-binding complex, Ku70 subunit [Auricularia delicata
TFB-10046 SS5]
Length = 662
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 312 EKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRC 369
E +KLLGF D + + +K +LFI E + +T +AL + + + +K A+V
Sbjct: 391 EPGLKLLGFKDRTELRFEDNVKH-SLFIYPNESAFNGSTRTFAALLQVLAKKDKFALVVG 449
Query: 370 VWRQGQQSVVVGVL-TPNVSEKIN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 425
+ R ++ V +K +P F+ VLPFA+D+R S +
Sbjct: 450 ITRANSSPAFYAMIPQEEVLDKAGAQIVPPGFHLIVLPFADDIRSATVES------AEAA 503
Query: 426 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
+++ ++AA L+ L++ SG P+ PNPAL+ Y L+
Sbjct: 504 SDELKDAARALINKLNVK-SG----YDPKKFPNPALKLHYEQLQ 542
>gi|341896246|gb|EGT52181.1| CBN-CKU-80 protein [Caenorhabditis brenneri]
Length = 779
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 264 EVKVDYEYKSVEDPSKVVPPEQRIK---GYRYGPQVVPIS----SAEWEAVKFKPEKS-- 314
++K+D +Y + K P + IK GY +G V+ + ++ F ++
Sbjct: 278 DIKLDAKYGKTDKTDKNYKPVENIKLMHGYNFGKSVIMMDPEYLKEKYNDHNFNEGQTGG 337
Query: 315 -VKLLGFTDASNI----------------LRHYYMKDVNLFIAEPG----NSRATVAVSA 353
+KL+ FT +N+ + Y+ D + P S AT A A
Sbjct: 338 VLKLIQFTKKANVGLLSDTAQIFSKNNFQILDSYLVDSSAKTVLPSLNAPKSGATKATVA 397
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREF 411
+ +AM ++ VA+ R + + V + L P+ E+ + Y LPF++D+R
Sbjct: 398 IIQAMLDLRVVALCRYTF-HAKSHVQLIALIPHKDEETGV---LYMRSVKLPFSDDMRTL 453
Query: 412 QFPSFS---KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 468
+FP FS S +P Q A D+L+ + L S +++ ++ +P L+ H +
Sbjct: 454 KFPKFSFDDDEVDSNKPTVAQLSAVDDLIDCMQLPESDISSLVEGGMS-DPKLQMQCHFI 512
Query: 469 E 469
+
Sbjct: 513 K 513
>gi|156407043|ref|XP_001641354.1| predicted protein [Nematostella vectensis]
gi|156228492|gb|EDO49291.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 28/243 (11%)
Query: 258 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY-RYGPQVVPISSAEWEAVKFKPEKSVK 316
D + +V +Y + ++++P + IK Y ++G + + E ++K + +
Sbjct: 286 DSRTNEDCQVHTKYICKDTGAELMPTD--IKFYQKFGGEKIIFEKEEVASMKKFGDPGLL 343
Query: 317 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 375
L+GF + R Y++K + ++ E + +T SAL + + V I R + R
Sbjct: 344 LMGFKPRVTLKRFYHVKPAHFIYPDEKSITGSTTLFSALLTKCLDRDVVPICRYIPRGSA 403
Query: 376 QSVVVGVLTPNVSEKIN-----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 430
V +L P E + P F+ LPFA+D+R+ K+P + +E Q
Sbjct: 404 APSFVALL-PQEEEYDDSNVQVTPPGFHVIFLPFADDMRKL------KYPKKPEVSEDQI 456
Query: 431 EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 490
E A +++ L NP L++ ++ LE + +D AP ++D +T
Sbjct: 457 EKAQKIIRKLHFT-------FDSTSFENPTLQKHFNSLEALALDRD-APEEVND----LT 504
Query: 491 EPD 493
PD
Sbjct: 505 VPD 507
>gi|285028687|gb|ADC34633.1| DSB repair complex subunit Ku70 [Penicillium decumbens]
Length = 620
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
+D ++ V + K Y++G + V + E + ++ E ++++GF S + +K
Sbjct: 288 ADDTAQTVEKAEIRKAYKFGGEQVTFTPEELQGLRNFGEPVIRIIGFKPLSTLPIWANVK 347
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ ++ E +T SAL + + + K+A+V + R+ VV ++ EK++
Sbjct: 348 HPSFIYPCEDDFVGSTRVFSALHQKLLKDGKMALVWFIPRKNSAPVVAAMIA--GEEKLD 405
Query: 393 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
+P + LPFA+DVR+ S P + +A ++ L L P G
Sbjct: 406 ENNVQKVPPGMWLIPLPFADDVRQNPPSVLSVSP------DHLTDAMRQVIGQLQL-PKG 458
Query: 447 KGEILQPELTPNPALERFYHHLE 469
P+ PNPAL+ Y L+
Sbjct: 459 ---TYDPQKYPNPALQWHYRILQ 478
>gi|366994446|ref|XP_003676987.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
gi|342302855|emb|CCC70632.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
Length = 625
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 345
K YRYG V + S + ++ + + GF D + R+Y + IA+ G
Sbjct: 313 KAYRYGADYVVLPSTLQSQLVYETFPGLDIRGFMDMELLPRYYLNSESTFIIADTRLGGL 372
Query: 346 RATVAVSALARAMKEMNKVAIVRCVWRQG---QQSVVVGVLTPNVSEKI------NIPDS 396
+V L + KVA+ R V + Q V+V + + + N +
Sbjct: 373 ADSVTFGVLVDVLLNNRKVAVARYVPKANSEVQMCVLVPLFVAHHDQSFSGEGEENFVRT 432
Query: 397 FYFNVLPFAEDVREFQFPSFS 417
N LPFAED R FP +
Sbjct: 433 LVLNRLPFAEDERVSDFPRLT 453
>gi|320170254|gb|EFW47153.1| ATP-dependent DNA helicase II 70 kDa subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 732
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 287 IKGY-RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGN 344
IK Y YG + V E ++ + + L+GF + HY +K N ++ E
Sbjct: 442 IKNYFPYGGEKVIFDPTEVREIRRFGQPGLVLMGFKPTDAVKLHYNVKTANFIYPDETVV 501
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV----SEKINI-PDSFYF 399
+T+ AL + + +KVAI R + R V L P + + + + P F+
Sbjct: 502 MGSTLLFHALLMRLADQDKVAICRFIPRINATPRFVA-LVPQLEVFDANHVQLQPPGFHV 560
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA----ADNLVKMLDLAPSGKGEILQPEL 455
LPFA+D+R Q ++ NE ++ A +++K L + P
Sbjct: 561 IYLPFADDLRSLQ----------YEENEMCGKSLIVTASDIIKKLTFS-------FSPWD 603
Query: 456 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 493
NP L++ Y +LE + +D A D + +PD
Sbjct: 604 FENPNLQKHYRNLEALALGRDVA-----DDFEDNVQPD 636
>gi|269957016|ref|YP_003326805.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
gi|269305697|gb|ACZ31247.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
Length = 274
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 43/194 (22%)
Query: 279 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMK 333
KVVP E K Y G V ++ + + + ++ ++++ F + I R YY+
Sbjct: 53 KVVPYEHIDKAYDDGEHTVVLTKDDLSGLPAERDREIEVVEFVPSDQIDPIMLDRTYYL- 111
Query: 334 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
EP +S++T A L R ++E ++ A+V+ RQ + + V
Sbjct: 112 -------EP-DSKSTKAYVLLRRTLEETDRTAVVKFALRQRTRLAALRVRG--------- 154
Query: 394 PDSFYFNVLPFAEDVREFQFPSF------------------SKFPVSWQPNEQQQEAADN 435
D L +A++VRE +FP+ + F + P E + E
Sbjct: 155 -DVLVLQTLLWADEVREAEFPALDETVKVSAKELTMSQQLVASFEADFAPGEFEDEYQAQ 213
Query: 436 LVKMLDLAPSGKGE 449
L K++D A KGE
Sbjct: 214 LRKLID-AKIEKGE 226
>gi|384487999|gb|EIE80179.1| hypothetical protein RO3G_04884 [Rhizopus delemar RA 99-880]
Length = 572
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 83/422 (19%)
Query: 5 REALLLLLDVSPSMH--------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+E +L ++D +P+M V EK+ S ++ K ++ +VG++LFGT E +
Sbjct: 29 KECILFVIDCNPTMFIKDEKGDIPVKSAFEKIRSSMLSK-VLNQPTDQVGIVLFGTREKQ 87
Query: 57 NELTKEVGGYEHVKVLQDIKV--------VDGHLVQSLKHLPQGTCAGDF----LDAIVV 104
N E V VLQ I + +DG +Q++ L + D+ D V
Sbjct: 88 NATDNE-----SVYVLQTIDIPDASRIKEIDG-FIQNISTLHDKYRSIDWEFPMSDLFWV 141
Query: 105 GVDMLIKKYGETYKGKKHLCLITDALCPLKDPD------VGTKEDQVSTIARQMVAFGLR 158
D ++ K + LIT+ P ++ D V +D ++T ++ FGL+
Sbjct: 142 CSDAFFGRFSAPKYSAKRMFLITNNDNPHQNNDAIRQSSVQRAKDLITT-GVEIRLFGLQ 200
Query: 159 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 218
N SL I +D + FS + L K++ +
Sbjct: 201 KDNKPFNPSL-----FYNAILDDPTSDSFSCHPKLE--------QLEAIVKSKRAKSRSQ 247
Query: 219 FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE--- 275
F L+LS+ + I V Y E++ T K F T E +V +
Sbjct: 248 FHLPLKLSDHLSIGVTGYNMIIEQRISTAKY----------FYTAEDEVKEAIGTTRWIC 297
Query: 276 -DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-- 332
D ++ + + YG + + S E E ++ E + LLGF D + HY +
Sbjct: 298 VDTNQPLTRMDIDYAFNYGGEKIIFSKKELEDIQTLSEPGILLLGFRDIKELEPHYQVTH 357
Query: 333 ------------------KDVNLFIAEPG--NSRATVAVSALARAMKEMNKVAIVRCVWR 372
KD NLF + G ++ + ++ + E K + + R
Sbjct: 358 PYFIYPDDTVNNTKIVKAKDGNLFFYKKGKYTTQDCCSYTSTNQEAIETAKEVVNKLYMR 417
Query: 373 QG 374
+G
Sbjct: 418 EG 419
>gi|403218628|emb|CCK73118.1| hypothetical protein KNAG_0M02650 [Kazachstania naganishii CBS
8797]
Length = 574
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 41/235 (17%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS---VKLLGFTDASNILRHYY 331
+D SKV+P YG + +S+ + ++ E+ +K+LGF ++++
Sbjct: 315 KDISKVIP---------YGDVNIELSAEALQQMRASYEEEGPFMKVLGFRSTDLCVKYFN 365
Query: 332 MKDVNLFIA--EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
D FI E + +++L R ++ NK AI+ + S + ++ P+ E
Sbjct: 366 NIDKPSFIVPDELQYEGSIKTLASLFRTLRSKNKSAIIWGKPKSNSNSALY-IMVPSHRE 424
Query: 390 KINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KMLDLAPSG 446
N D FY + +PF +++R K P+ N+ Q D L +L
Sbjct: 425 DRN--DGFYMHRIPFLDELR--------KVPIKMVDNDWTQLDNDLLTVTETILKYFNLR 474
Query: 447 KGEILQPELTPNPALERFYHHL--------ELKSEHQDAAPPPL---DDSLKKIT 490
+G I P NP ++ +Y L E+K E D + L DD+LKKI+
Sbjct: 475 QGYI--PSEFKNPGIQNYYKVLHDYILQVEEIKHEGWDFSQEELLRQDDTLKKIS 527
>gi|159126402|gb|EDP51518.1| DSB repair complex subunit Ku70, putative [Aspergillus fumigatus
A1163]
Length = 690
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 190/468 (40%), Gaps = 88/468 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
R+A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 28 RDAVLFAIEVSDSMLTPRPSSDPKKRVEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y H + D+ V V+ L+ L + G D +V
Sbjct: 88 GTQASRFYDEDENSRGDLSYPHCYLFTDLDVPSAREVKELRALAEDE--GKARDVLVPSK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + K + L ++TD P D ++ + A+ +
Sbjct: 146 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD--SRSQRSAATVRAKDLYDL 203
Query: 156 GLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ +I+ + S + + V +++D SK S+A
Sbjct: 204 GVTIELFPISQPEHEFDSSKFYDDIIYKTSPT-DAEAPVYLKDD------SKVSTASGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDK 253
+ L + +R + F LEL KI V Y + + P Y +
Sbjct: 257 ISLLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYL-LFKRQAPARSCYVWLGGE 315
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P K T ++ +D ++ V + K Y++G V + E +A++ +
Sbjct: 316 KPQIVKGVTTQI--------ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDP 367
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
++++GF S + ++H + ++ +E +T SAL + + + +K+A+V
Sbjct: 368 VIRIIGFKPLSALPFWANVKHPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVW 423
Query: 369 CVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVRE 410
+ R+ V+ ++ EK++ P + LP+A+DVR+
Sbjct: 424 FIPRKNAAPVLGAMIAGE--EKVDENGVQKFPPGMWIITLPYADDVRQ 469
>gi|358382641|gb|EHK20312.1| hypothetical protein TRIVIDRAFT_83371 [Trichoderma virens Gv29-8]
Length = 647
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 28/263 (10%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
ED ++ V ++ K Y++G + V + E + ++ ++++GF I +K
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKNLRDFGSPIIRIIGFKKRDMIPAWASVK 384
Query: 334 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
+F +E ++ SAL + + +K+ + CV R Q ++ ++ +
Sbjct: 385 KSTFIFPSEEDYIGSSRVFSALWQKLLNDDKIGLAWCVLRSNAQPMIAALIPSREQSDET 444
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LP A+D+RE + + S E + +V+ L+L P G
Sbjct: 445 SGTPYLPAGLWIYPLPAADDMREIS--ADRRIDCS----EDLKTKMRVIVQQLNL-PKG- 496
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
I P PNPAL+ Y L+ + ++ P D +TEP AI
Sbjct: 497 --IYNPLKYPNPALQWHYKILQTLALDEEVPEKPED-----LTEP-------KNKAISKR 542
Query: 508 CGQFVIKENPKLKKSTRRFLREK 530
G ++ LK R +R +
Sbjct: 543 AGGYLEDWAETLKDEADRAVRSR 565
>gi|320592811|gb|EFX05220.1| dsb repair complex subunit [Grosmannia clavigera kw1407]
Length = 685
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 116/289 (40%), Gaps = 54/289 (18%)
Query: 259 KFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAE------WEAVKFKP 311
K AT E +KVD D ++ V + K Y++G + V + E WE
Sbjct: 328 KLATSETIKVD------SDSTRTVEVGEIKKAYKFGGEFVYFTPEELKGFKTWEFPDGWN 381
Query: 312 EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
K ++++GF I +K ++ +E +T SAL + +K+ KVAI V
Sbjct: 382 GKGLRIIGFKPRVLIPSWASVKRSTFIYPSEEDYVGSTRIFSALWQKLKKSEKVAIAWFV 441
Query: 371 WRQGQQSVVVGVLTPN----------------VSEKIN---IPDSFYFNVLPFAEDVREF 411
R V+V V+ N +N +P + LPFAED+R+F
Sbjct: 442 PRINTNPVLVAVIPSNGPDGGSEGDGDGSGDGEKRSVNPSHLPAGLWLYPLPFAEDIRKF 501
Query: 412 QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELK 471
S + P + E + +NL L P P PNPAL+ Y L++
Sbjct: 502 D-DSRAPLPRPAELTELMKPVVENL-----LLPK---TAYDPAKYPNPALQWHYKILQVL 552
Query: 472 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 520
+ LD+ + K + DPTL AID G + + +LK
Sbjct: 553 A---------LDEEVPKQGD-DPTL--PKYKAIDKRVGGSLAEIKERLK 589
>gi|70998276|ref|XP_753862.1| DSB repair complex subunit Ku70 [Aspergillus fumigatus Af293]
gi|66851498|gb|EAL91824.1| DSB repair complex subunit Ku70, putative [Aspergillus fumigatus
Af293]
Length = 691
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 190/468 (40%), Gaps = 88/468 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
R+A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 28 RDAVLFAIEVSDSMLTPRPSSDPKKRVEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIV--- 103
GT+ + E+E ++ Y H + D+ V V+ L+ L + G D +V
Sbjct: 88 GTQASRFYDEDENSRGDLSYPHCYLFTDLDVPSAREVKELRALAEDE--GKARDVLVPSK 145
Query: 104 --VGVDMLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 155
V + ++ + + K + L ++TD P D ++ + A+ +
Sbjct: 146 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD--SRSQRSAATVRAKDLYDL 203
Query: 156 GLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 197
G+ ++ +I+ + S + + V +++D SK S+A
Sbjct: 204 GVTIELFPISQPEHEFDSSKFYDDIIYKTSPT-DAEAPVYLKDD------SKVSTASGDG 256
Query: 198 VDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDK 253
+ L + +R + F LEL KI V Y + + P Y +
Sbjct: 257 ISLLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYL-LFKRQAPARSCYVWLGGE 315
Query: 254 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 313
P K T ++ +D ++ V + K Y++G V + E +A++ +
Sbjct: 316 KPQIVKGVTTQI--------ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDP 367
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
++++GF S + ++H + ++ +E +T SAL + + + +K+A+V
Sbjct: 368 VIRIIGFKPLSALPFWANVKHPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVW 423
Query: 369 CVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVRE 410
+ R+ V+ ++ EK++ P + LP+A+DVR+
Sbjct: 424 FIPRKNAAPVLGAMIAGE--EKVDENDVQKFPPGMWIITLPYADDVRQ 469
>gi|112362565|emb|CAL36029.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 458
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELEYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 459 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 502
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|373956335|ref|ZP_09616295.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
gi|373892935|gb|EHQ28832.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
Length = 256
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 334
E+ K VP ++ +KGY+Y V I A++EA + K +++ F D + YY +
Sbjct: 49 ENTKKEVPYDKIVKGYKYEDDYVIIEDADFEAAAPEKSKVIEIENFVDMDAVNPMYY--E 106
Query: 335 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
+ +I EP ++ A + L A+K+ +K + R V R + +V
Sbjct: 107 TSYYI-EP-ETKNNKAYALLLEALKKSDKAGLARFVLRSTESLCIV 150
>gi|112362567|emb|CAL36028.1| HDF1 protein [Saccharomyces bayanus]
gi|112362571|emb|CAL36026.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 458
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHEVDYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 459 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 502
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|91082987|ref|XP_974250.1| PREDICTED: similar to ku P80 DNA helicase [Tribolium castaneum]
gi|270007031|gb|EFA03479.1| hypothetical protein TcasGA2_TC013478 [Tribolium castaneum]
Length = 513
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 267 VDYEYKSVE-DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 325
+D E +S+E D S+V I G + VP+++ ++ +S +L FTDA+N
Sbjct: 266 IDAEDESIEFDASEV------ISGVSRHGKFVPVNNKMFQV---SSSRSFSVLCFTDAAN 316
Query: 326 ILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQ-QSVVVGVL 383
+ H M+ + P S A + L + + NK I R V+ +VV V
Sbjct: 317 VPEHL-MRGGGCYSVLPNASLEKNDAFNCLIDCLAQQNKYVIARRVYNNNYVPKIVVLVP 375
Query: 384 TPNVSEKINIPDSFYFNVLPFAEDVR 409
P+ + P F LPFA+DVR
Sbjct: 376 KPDYN-----PKCFVLTALPFADDVR 396
>gi|281311975|dbj|BAI58987.1| Ku70 protein [Colletotrichum higginsianum]
Length = 651
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 325 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 384
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 385 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 444
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 444
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 445 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 497
Query: 445 SGKGEILQPELTPNPALERFYHHLEL 470
+ + P+ PNP+L+ Y L++
Sbjct: 498 A----MFNPKKYPNPSLQWHYKILQV 519
>gi|206598192|gb|ACI15997.1| KU70 protein [Bodo saltans]
Length = 778
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 24/204 (11%)
Query: 313 KSVKLLGFTDASNILRHYYMKDVNLFI----AEPGNSRATVAVSALARAMKEMNKVAIVR 368
+ +LGF + + +R Y + F+ + G A L R + NKVAI
Sbjct: 497 RGFTILGFKKSEDAIRFKYNVARSGFLHCTTQKGGGQGALKFFVQLHRTLSTQNKVAIAE 556
Query: 369 CVWRQGQQSVVVGVLTPNVSEKINIPDS-----FYFNVLPFAEDVREFQFPSFSKFPVSW 423
V R +V +L + + DS F+ +P+A+DVR F P K P
Sbjct: 557 FVSRDNVAPRLVALLPSKLLHDHPMMDSVTGLGFHLIQIPYADDVRSFH-P--RKQPAEA 613
Query: 424 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 483
QP + Q A +++ L + NPAL+R Y L+ + D AP +D
Sbjct: 614 QPTDDQITKAKRVIRKLQVE-------YDVNAIANPALQRQYKILQ-QLALIDPAPVQVD 665
Query: 484 DSLKKITEPDPTLLAESQSAIDAF 507
D +T PD +A+ + F
Sbjct: 666 D----LTLPDVEGMAKIAPTLQEF 685
>gi|332028750|gb|EGI68781.1| ATP-dependent DNA helicase 2 subunit 1 [Acromyrmex echinatior]
Length = 509
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-----------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
REA L L+D + M D++ KL +++++KL + +GV+LFGTE
Sbjct: 18 REATLFLVDCTEKMFMHSSDIDDKKITYIEKFFKLYKQILRQKLAWSMQDWMGVVLFGTE 77
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY 113
++++ + +++ LQ+++VV +Q ++ L + L +I V + I
Sbjct: 78 KSDSN-----SPWTNIQTLQELRVVTLDDLQQIRKLSK-------LQSINVAYSLKINMK 125
Query: 114 GETYKGKKHLCLITDAL 130
G K+ L+ DAL
Sbjct: 126 GYESMKLKNNALLLDAL 142
>gi|257791350|ref|YP_003181956.1| Ku protein [Eggerthella lenta DSM 2243]
gi|257475247|gb|ACV55567.1| Ku protein [Eggerthella lenta DSM 2243]
Length = 274
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 252 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 309
D A ++ A +K K+ D + + PE +KGY+Y G VV + E + +K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDVIKT 83
Query: 310 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 369
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAIGTT 139
Query: 370 VW 371
V
Sbjct: 140 VL 141
>gi|293400606|ref|ZP_06644751.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373452080|ref|ZP_09543998.1| Ku protein [Eubacterium sp. 3_1_31]
gi|291305632|gb|EFE46876.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371967512|gb|EHO84983.1| Ku protein [Eubacterium sp. 3_1_31]
Length = 264
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGF 320
THE +V Y+ K + K + E +KGY+Y + V +++ E E +K + ++++++ F
Sbjct: 38 THE-RVKYK-KYCPNCDKELKSEDIVKGYQYEKDKYVIMTNDEIEKLKVEKDRTIQIQHF 95
Query: 321 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 380
T +NI YY K+ + A P A A L +AM+E N VA+ + V G + ++
Sbjct: 96 TSLANINDLYYEKN---YYAVP-EKHAEKAYELLRKAMQEENVVAVAKTVI--GTKETLL 149
Query: 381 GVLTPNVSEKINIPDSFY 398
L P+ E+I + FY
Sbjct: 150 A-LCPS-DEEIIVKTLFY 165
>gi|380485661|emb|CCF39216.1| ATP-dependent DNA helicase II [Colletotrichum higginsianum]
Length = 498
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 172 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 231
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 232 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 291
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 444
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 292 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 344
Query: 445 SGKGEILQPELTPNPALERFYHHLEL 470
+ + P+ PNP+L+ Y L++
Sbjct: 345 A----MFNPKKYPNPSLQWHYKILQV 366
>gi|255561040|ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
gi|223539210|gb|EEF40803.1| ku P70 DNA helicase, putative [Ricinus communis]
Length = 626
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 276 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 335
+P+K+ P Y + + S E +K ++LLGF S LR Y+
Sbjct: 322 EPTKLSHP--------YKNENIKFSVEELAEIKRISTGHLRLLGFKPLS-CLRDYHNLRP 372
Query: 336 NLFIAEPGNSRATVAVS---ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
+ F+ P + + S AL R+M +N+ A+ + V + VS
Sbjct: 373 STFVF-PSDKEVIGSTSIFIALHRSMLRLNRFAVAFYGGSSHPRLVALVAQDEIVSAGGQ 431
Query: 393 I-PDSFYFNVLPFAEDVR---EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 448
I P + LP+++DVR EF S P N Q + A L+K +DL
Sbjct: 432 IEPPGMHMIYLPYSDDVRHIEEFHSESNVGLP---HANGDQTKKAAGLIKRIDLKDFSVC 488
Query: 449 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 486
+ NPAL+R Y L+ + +D P D++L
Sbjct: 489 QF------ANPALQRHYAVLQALALEEDEMPESKDETL 520
>gi|112362569|emb|CAL36027.1| HDF1 protein [Saccharomyces bayanus]
Length = 581
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 458
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELDYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 459 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 502
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|148265477|ref|YP_001232183.1| Ku domain-containing protein [Geobacter uraniireducens Rf4]
gi|269933390|sp|A5G742.1|Y3454_GEOUR RecName: Full=Probable DNA repair protein Gura_3454
gi|146398977|gb|ABQ27610.1| Ku domain protein [Geobacter uraniireducens Rf4]
Length = 261
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 279 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
K+VPP++ I+GY GP + +PI+ E E+V + ++++++ F D + + YY L
Sbjct: 55 KMVPPDEIIRGYEIGPDRYLPITDEELESVSPERSRTIEIVEFIDMNEVDPIYYDHPYYL 114
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV----GVLT 384
+ G A L M+ NK + + V + + V V G LT
Sbjct: 115 VPLKGGEK----AYRLLVEVMRRTNKAGLAKFVLAEREYLVAVKSTEGALT 161
>gi|310795234|gb|EFQ30695.1| ATP-dependent DNA helicase II [Glomerella graminicola M1.001]
Length = 652
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY--Y 331
ED ++ V + K Y++G + V + E +++K ++++GF S IL +
Sbjct: 326 AEDSARTVEKTEFKKAYKFGGEFVHFAPEEQKSLKAFGSPIIRIIGFKPRS-ILPFWASV 384
Query: 332 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 386
K +F +E +T SAL + + K+ I + R ++ V+ + +
Sbjct: 385 KKSTFIFPSEEDYVGSTRVFSALWQKLLNDKKIGIAWAITRSNASPILAAVIPSHEKSED 444
Query: 387 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 446
S +P + LPFA+D+RE P S +S + + + +V+ L L +
Sbjct: 445 DSGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVIS---SNELTDRMRVIVQQLQLPKA- 499
Query: 447 KGEILQPELTPNPALERFYHHLEL 470
+ P+ PNP+L+ Y L++
Sbjct: 500 ---MFNPKKYPNPSLQWHYKILQV 520
>gi|121713328|ref|XP_001274275.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
gi|119402428|gb|EAW12849.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
Length = 654
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LR 328
+D ++ V + K Y++G + + + E +A++ + ++++GF S + ++
Sbjct: 328 ADDTARTVEKSEIRKAYKFGNEQISFTPEEQKALRNFGDPVIRIIGFKPLSALPFWANVK 387
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
H + ++ +E +T SAL + + + KV +V + R+ + V+G L
Sbjct: 388 HPFF----IYPSEEDYVGSTRVFSALHQKLLKDQKVGLVWFIPRKNA-APVLGALIAG-E 441
Query: 389 EKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
EK++ P + LPFA+DVR Q P S V+ +P Q +++ L L
Sbjct: 442 EKVDENDVQKFPPGMWIIPLPFADDVR--QNPETS-LNVAPEPLIDQMR---TIIQQLQL 495
Query: 443 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 502
+ + +P+ PNP+L+ Y L+ + +D P D ++ K +
Sbjct: 496 PKA----MYEPQKYPNPSLQWHYRILQALALDEDLPEKPEDKTVPKYRQ----------- 540
Query: 503 AIDAFCGQFVIKENPKLKK 521
ID G +V+ +L+K
Sbjct: 541 -IDKRAGDYVLSWADELEK 558
>gi|358339792|dbj|GAA29239.2| acylaminoacyl-peptidase [Clonorchis sinensis]
Length = 1249
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 251 SDKAPSTDKFATHEV-KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA-VK 308
+D P T + ++V K + E+ ED ++ P I+G + G + + E ++
Sbjct: 914 ADNKPVTVRRHRYKVSKSNGEFDPTED---LLLPHDLIRGVKVGSRHLCFEQEEISGNIR 970
Query: 309 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRAT-VAVSALARAMKEMNKVAIV 367
+ LLGF + +++ + + R + V + L + +A+
Sbjct: 971 DLAPVGIHLLGFKPIHRLRPYHHTRAPQFIYPDESYIRGSRVWFTTLLQVCLNRRLLAMA 1030
Query: 368 RCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPV 421
V R+ ++ ++ EK++ P F+ LP+ +D R+ + P F
Sbjct: 1031 LYVQRKNIPPRLIALIPQE--EKLDEDGVQVYPPGFHIIFLPYCDDFRDLELPEFE---- 1084
Query: 422 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 476
+E+Q EAA +VK L + P P NP L+R Y LE + H+D
Sbjct: 1085 --LASEEQVEAAKTMVKKL-MVP------YDPRQISNPILQRHYAVLEALALHRD 1130
>gi|307206892|gb|EFN84738.1| Protein Ku70 [Harpegnathos saltator]
Length = 540
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
REA L +D + M P+ + KL +++++KL + +GVILFGT++ +
Sbjct: 27 REATLFAVDATQQMFKEDPETKLSYIHKFFKLYKQILRQKLAWSMQDWMGVILFGTDQKD 86
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG 96
+ +EH++ LQ + VV +Q ++ L + G
Sbjct: 87 AD-----SYWEHIQTLQQLGVVTLDDLQCIRKLSKSNVKG 121
>gi|378730608|gb|EHY57067.1| ATP-dependent DNA helicase 2 subunit 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 681
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y +G Q + S E + ++ + ++++GF S + +K+ ++ +E
Sbjct: 360 KAYTFGGQQITFSDEEVKQLRNFGDPVIRIIGFKPMSRLPLWANIKNSTFIYPSEEDYVG 419
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL----TPNVSEKINI--------P 394
+T SAL + + + + V R+ V+ ++ + EK N P
Sbjct: 420 STRVYSALYQKLLKDKLFGLTWFVPRRNAVPVMAAMIPTLPAEALDEKANTAGNSPTGAP 479
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
+ LPFA+DVR+ P+ + P+ P+E +A ++++ L+L P G I P
Sbjct: 480 QGLHLVPLPFADDVRQ-NPPTTHEHPL-LAPDELV-DAMRHIIQQLNL-PKG---IYDPS 532
Query: 455 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 514
PNP+L+ Y L+ + +D P D ++ K + ID G I+
Sbjct: 533 KYPNPSLQWHYRILQALALDEDIPEKPEDKTIPKYKQ------------IDKRVGNEAIE 580
Query: 515 ENPKLKKSTRRFLREK----PSGSDEP 537
L K+ + + E P+GS P
Sbjct: 581 WGSILDKAYKHYHAENPDAVPTGSKRP 607
>gi|212530704|ref|XP_002145509.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
gi|210074907|gb|EEA28994.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
Length = 653
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM V P K L+Q+++I +GV+ FG
Sbjct: 29 KDAVLFAIDISDSMLEVRPPESGKGEPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFFG 88
Query: 52 TEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL 89
TE + E+E ++ Y H + D+ V D + V+SL+ L
Sbjct: 89 TEASKFYDEDENSRGGLSYPHCYLFTDLDVPDANDVKSLRAL 130
>gi|151945992|gb|EDN64224.1| DNA binding protein [Saccharomyces cerevisiae YJM789]
Length = 602
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PN 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P + DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNIKKDRMMREDDSLRKL 545
>gi|188584779|ref|YP_001916324.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349466|gb|ACB83736.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 259
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 270 EYKSV-EDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 327
EYK V + K VP E+ +KGY Y P + V + ++EA+ + +S+ ++ F + S I
Sbjct: 43 EYKRVCSNCKKEVPYEEIVKGYEYEPGKFVVLEDEDFEALPQEEARSINIVEFVNLSEID 102
Query: 328 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 372
YY K L E G L + +KE KVA+ + V R
Sbjct: 103 PVYYDKTYYLTPQETGEK----PYQLLKQVLKEKGKVAVCKVVIR 143
>gi|337743283|gb|AEI73138.1| XRCC 6 [Kryptolebias marmoratus]
Length = 306
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
P + K YG + + + E +A+K + + L+GF + H++++ E
Sbjct: 142 PSEIKKAQVYGKKQIVMERDEVDAIKKFDDPRLFLIGFKPMEKLKLHHHIRPSVFIYPEE 201
Query: 343 GNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-PDS 396
+ + + + SAL + E N A+ RC+ R+ V L P + + K+ I P
Sbjct: 202 EDVKGSACLFSALLKKCSERNIFALCRCISRRNYPPRFVA-LVPQLEDVDEGKVQITPPG 260
Query: 397 FYFNVLPFAEDVREFQFP 414
F LP+A+D+R P
Sbjct: 261 FNVIYLPYADDLRTLDPP 278
>gi|281200480|gb|EFA74700.1| hypothetical protein PPL_11669 [Polysphondylium pallidum PN500]
Length = 132
Score = 42.0 bits (97), Expect = 0.93, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 398
++ PG+ A A+S+L M E + + R V R G S + +L P++ + Y
Sbjct: 2 VSPPGDKVARSALSSLIHGMAETKQALLSRYVKRNG-SSASIALLYPHIKANY---ECLY 57
Query: 399 FNVLPFAEDVREFQFPSFSKF-PVSWQPNEQQQEAAD 434
LPF +D++++QFP + P + +P E D
Sbjct: 58 VCQLPFLDDLKQYQFPPIAPTNPATRKPFIPTAEQVD 94
>gi|284043275|ref|YP_003393615.1| Ku protein [Conexibacter woesei DSM 14684]
gi|283947496|gb|ADB50240.1| Ku protein [Conexibacter woesei DSM 14684]
Length = 300
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP EQ +KGY P + V ++ E +A+ + K++ + F D ++I YY D I
Sbjct: 56 VPFEQIVKGYEVAPDRYVIVTQDELDALDPRATKTIDIEEFVDLADIDPVYY--DSAYHI 113
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
A P A A L AM+E KVAI R V R QQ
Sbjct: 114 A-PATGGAK-AYRLLLSAMEEAGKVAIGRFVLRTRQQ 148
>gi|349580576|dbj|GAA25736.1| K7_Yku70p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 602
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + S + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSSSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|357614085|gb|EHJ68897.1| hypothetical protein KGM_11435 [Danaus plexippus]
Length = 594
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 216 VTIFRGDLELSEKMKIKVWVY---KKTGE--EKFPTLKKYSDKAPSTDKFATHEVKVDYE 270
+ I + + E+ + I V VY KK G+ +K L + S+ ++ K T +V D
Sbjct: 218 IAIAKINFEIGDTFNIGVSVYTLLKKAGQNNKKNINLDRESNAIVTSIK-NTLKVSNDVI 276
Query: 271 YKSVEDPSKVVPP---EQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASN 325
+ +D SK P + + +G + V + E + +K F P +KLLGF AS
Sbjct: 277 DEDSQDRSKRKVPLLKSELLHYQEFGGERVEFTDEEMKMIKNPFGP-PMMKLLGFKPASI 335
Query: 326 ILRHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
I + + + F+ P S +TVA AL A M VA+ R + V+V
Sbjct: 336 ICKEKWYFKIGQFLY-PNESIIEGSTVAFKALHEACTVMKMVALCILCTRVNSRPVIVA- 393
Query: 383 LTPNVSE-KINIPDSFYFNVLPFAEDVREFQ 412
L+P V +NI F +PF E VRE
Sbjct: 394 LSPCVKPLNLNIDIGFDIVNIPFVEHVRELN 424
>gi|342870008|gb|EGU73367.1| hypothetical protein FOXB_16128 [Fusarium oxysporum Fo5176]
Length = 644
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V S E +++K ++++GF S + +
Sbjct: 321 AEDSTRTVEKAEIKKAYKFGGEYVYFSPDEQKSLKDFGSPIIRIIGFKPRSLLPVWASTK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 392
K +F +E +T +AL + + + +K+ + C+ R Q ++ ++ +
Sbjct: 381 KSTFIFPSEEDYVGSTRVFTALWQKLLKDDKMGVAWCITRANAQPMLAAIIPSRERSDAD 440
Query: 393 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
+P + LPF +D+R PS S + Q + +++ L L +
Sbjct: 441 SGTPYLPAGLWIYPLPFQDDLRNINPPS-EVLRSSGELTTQMR----TIIQQLQLPKA-- 493
Query: 448 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 492
+ P PNPAL+ Y L+ + ++ P DD+ TEP
Sbjct: 494 --MYDPLKYPNPALQWHYRILQALALEEE-VPEKADDA----TEP 531
>gi|290970691|ref|XP_002668219.1| predicted protein [Naegleria gruberi]
gi|284081492|gb|EFC35475.1| predicted protein [Naegleria gruberi]
Length = 225
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 295 QVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSA 353
Q+ +S + E V + +KL+GF S + + H Y L+ + + + + +SA
Sbjct: 103 QLKNVSGVKNEHV----QPGIKLIGFKPKSRLKIYHNYKSSGFLYPNDSKINGSLLTLSA 158
Query: 354 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKIN---IPDSFYFNVLPFAED 407
L + M EMN++AI R + R+G + +L + E+ N P F LP+A++
Sbjct: 159 LHKKMIEMNRIAICRFIQREGTMPQFIALLPQEELIDEESNTQITPPGFQIIYLPYADE 217
>gi|302881903|ref|XP_003039862.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
gi|256720729|gb|EEU34149.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
Length = 1793
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 144/337 (42%), Gaps = 35/337 (10%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 332
ED ++ V + K Y++G + V + E +++K ++++GF S + +
Sbjct: 321 AEDSARTVEKGETKKAYKFGGEYVYFTPDEQKSLKDFGSPIIRIIGFKSRSQLPIWASVK 380
Query: 333 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 387
K +F +E +T +AL + + + +K+ + C+ R Q ++ ++ + +
Sbjct: 381 KSTFIFPSEEDFVGSTRVFTALWQKLLKDDKIGLAWCITRANAQPILAAIIPSRERSDDE 440
Query: 388 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
S +P + LPF +D+R P + +++ + +V+ L L +
Sbjct: 441 SGTPYLPAGLWIYPLPFLDDLRSINPPG-----EVVRSSDELKTQMRTIVQQLQLPKA-- 493
Query: 448 GEILQPELTPNPALERFY---HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 504
+ P PNPAL+ Y L L+ E + A + K I++ L + +
Sbjct: 494 --MYNPSKYPNPALQWHYKILQALALEEEVPEKAEDTTEPKFKAISKRAGGYLEDWSETL 551
Query: 505 DAFCGQFVIKENPK-------LKKSTR-RFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 556
+ G+ ++ K +K + R R EKPSGS S+S +Q ++ES
Sbjct: 552 EGEAGRVSSAKSTKREADDDDVKPTKRSRGSSEKPSGS-------SLSTSQLKTAIESGG 604
Query: 557 V--VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 591
+ +TV ++ DL + + D + V++ + D
Sbjct: 605 ITKMTVVQLRDLLGAKGLSTAGRKMDLIERVEQVVMD 641
>gi|322795604|gb|EFZ18283.1| hypothetical protein SINV_00939 [Solenopsis invicta]
Length = 536
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEK---LCSRLIQKKLIYGKNHEVGVILFGTEETE 56
REA L L+D + M + L ++K L +++++KL + +GV+LFGTEE++
Sbjct: 25 REATLFLVDTTQKMFEIELESKLSHIQKFFKLYKQILRQKLAWSMKDWMGVVLFGTEESD 84
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT 93
L ++++++L ++++V +Q ++ L +
Sbjct: 85 VNL-----AWKNIQILHELRIVTLDDLQKIRKLTKNN 116
>gi|190344290|gb|EDK35939.2| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 346 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 403
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 404 FAEDVREFQFPSFSKFPVSW-----QPNEQQQEAADNL-VKMLD--LAPSGKGEI----- 450
F ED + +FP S F + +PN+ + + + K LD L SG I
Sbjct: 349 FKEDEKMGRFPKLSTFTTTSGKKIDEPNDLDMKMEEFIQSKDLDAVLGSSGPATISNRKV 408
Query: 451 -------------LQPELTP-NPALERFYHHLE---LKSEHQDAAPPPL 482
+QP L P +PA++++ +L+ KS D+ P L
Sbjct: 409 TMREPSSLPVELPVQPTLIPSSPAIQKYNQNLKRIIAKSLGHDSLPAYL 457
>gi|37931498|gb|AAP13464.1| Ku80p [Kluyveromyces lactis]
Length = 521
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 348 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK-INIPDSFYFNVLPF 404
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 405 AEDVREFQFP 414
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|146421429|ref|XP_001486660.1| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 345
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 346 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 403
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 404 FAEDVREFQFPSFSKFPVSW-----QPNEQQQEAADNL-VKMLD--LAPSGKGEI----- 450
F ED + +FP S F + +PN+ + + + K LD L SG I
Sbjct: 349 FKEDEKMGRFPKLSTFTTTSGKKIDEPNDLDMKMEEFIQSKDLDAVLGSSGPATISNRKV 408
Query: 451 -------------LQPELTP-NPALERFYHHLE---LKSEHQDAAPPPL 482
+QP L P +PA++++ +L+ KS D+ P L
Sbjct: 409 TMREPSSLPVELPVQPTLIPSSPAIQKYNQNLKRIIAKSLGHDSLPAYL 457
>gi|160879871|ref|YP_001558839.1| Ku protein [Clostridium phytofermentans ISDg]
gi|269969713|sp|A9KS68.1|Y1728_CLOPH RecName: Full=Probable DNA repair protein Cphy_1728
gi|160428537|gb|ABX42100.1| Ku protein [Clostridium phytofermentans ISDg]
Length = 257
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 279 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 337
K V E +KGY Y + V I+ E E +K + EKS+++L F + I YY K
Sbjct: 52 KEVKTEDIVKGYEYDDDKYVVITDEEIEKIKTEKEKSIQILHFAQLNQISPVYYEKTYQA 111
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
+ E G + A L A+ K+AI + V G + ++ ++ P D
Sbjct: 112 -VPETGGEK---AFELLRSALMAEQKIAIGKTVM--GTKDTLMAII-PR-------EDGI 157
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 441
+ + +A+D++ Q ++K V NEQ+ A L+ +D
Sbjct: 158 LISTMFYADDIKAIQ-KQYTKPEV----NEQEFNMAKLLINSMD 196
>gi|282891301|ref|ZP_06299803.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175062|ref|YP_004651872.1| DNA repair protein [Parachlamydia acanthamoebae UV-7]
gi|281498798|gb|EFB41115.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479420|emb|CCB86018.1| putative DNA repair protein Fjoh_3304 [Parachlamydia acanthamoebae
UV-7]
Length = 270
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 279 KVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
K VP + +KGY Y G VV + ++E K K+++++ F D + + YY K
Sbjct: 53 KEVPWNEIVKGYEYEKGDYVV-LDDKDFEKANLKKTKTIEIVNFVDENEVDTIYYSKP-- 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
+ EP + A A S L A+K+ KV + + + R + V+ V
Sbjct: 110 -YFLEP-DKNAFSAYSLLREALKKSKKVGLAKYILRNREHLAVIKV 153
>gi|167036900|ref|YP_001664478.1| Ku domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115319|ref|YP_004185478.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855734|gb|ABY94142.1| Ku domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928410|gb|ADV79095.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 270
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYMVMETMHFPDEI 170
>gi|326390406|ref|ZP_08211964.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018424|ref|YP_004820777.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993524|gb|EGD51958.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033767|gb|AEM79493.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 270
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|83590332|ref|YP_430341.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
gi|83573246|gb|ABC19798.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 281 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 338
VPPE+ +GY Y G V+ + + EA+ + +S+ ++ F D I Y+ + L
Sbjct: 55 VPPEEIARGYEYEKGKYVI-LREEDLEAIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLA 113
Query: 339 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 385
A+ G + L +AM+E KVA+ R R + V V P
Sbjct: 114 PADMGQKPYLL----LKKAMEETGKVAVARVTIRSRESLATVRVYGP 156
>gi|113913535|gb|ABI48911.1| YKU70 [Saccharomyces pastorianus]
Length = 601
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + + + + ++++GF + ++ + + FI P
Sbjct: 331 VKVYPYGDLDIKLSEKQNQVIMEAYTQKDAFLRIIGFRSPDRSIHYFNNIEKSTFIV-PD 389
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ L K + K + +W + + + + VL+P+ E+ N + FY
Sbjct: 390 EAKYEGSIRTLTSLFKTLRKKDKIALLWGKLKSNSHPSLFVLSPSSVEEYN--EGFYLYR 447
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ E+ + DN+ ++ + + P NP
Sbjct: 448 IPFLDEIR--KFPSL----LSYDSGEKHKLDYDNMKRITQSIMGYFNLRDGYNPSDFKNP 501
Query: 460 ALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 502
+L+R + +E+ +E + + + DDSL+K+ +L +S
Sbjct: 502 SLQRHFKVLHDYLLQIEINTEENETSEAKINRVIHEDDSLRKLYHIRNKILESEKS 557
>gi|112362615|emb|CAL36004.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|241958364|ref|XP_002421901.1| high affinity DNA-binding factor subunit, putative; protein Ku DNA
binding protein subunit, putative [Candida dubliniensis
CD36]
gi|223645246|emb|CAX39888.1| high affinity DNA-binding factor subunit, putative [Candida
dubliniensis CD36]
Length = 610
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 280 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-SVKLLGFTDASNILRHYYMKDVNLF 338
+VP + G++Y + + + E V P S+ +LGF +N Y+ +D
Sbjct: 290 IVPRAECTPGFKYSHRDILALTLELTEVATLPTYPSINVLGFMKTNNFCYAYFTQDAMYV 349
Query: 339 IAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
I +S R + +++ AM E+N +A+VR V + + V V+ I +
Sbjct: 350 IPHQKDSERNRLTFNSMVTAMIELNYIALVRFVQKPDGEVQVCAAFPKKVALGNQIGEVL 409
Query: 398 YFNVLPFAEDVREFQFPSFS 417
+ ED + +FP +
Sbjct: 410 LLVRIAMKEDEKIGRFPDLN 429
>gi|50304291|ref|XP_452095.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641227|emb|CAH02488.1| KLLA0B12672p [Kluyveromyces lactis]
Length = 609
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 347
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 348 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK-INIPDSFYFNVLPF 404
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 405 AEDVREFQFP 414
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|167039605|ref|YP_001662590.1| Ku domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915145|ref|ZP_07132460.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307725069|ref|YP_003904820.1| Ku protein [Thermoanaerobacter sp. X513]
gi|166853845|gb|ABY92254.1| Ku domain protein [Thermoanaerobacter sp. X514]
gi|300888869|gb|EFK84016.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307582130|gb|ADN55529.1| Ku protein [Thermoanaerobacter sp. X513]
Length = 270
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYLVMETMHFPDEI 170
>gi|392939504|ref|ZP_10305148.1| Ku protein [Thermoanaerobacter siderophilus SR4]
gi|392291254|gb|EIV99697.1| Ku protein [Thermoanaerobacter siderophilus SR4]
Length = 270
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|367474269|ref|ZP_09473786.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273415|emb|CCD86254.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 309
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 276 DPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRH 329
D + VP E +KGY Q + +S E E + + +++++ F D ++I +R
Sbjct: 53 DTGEEVPSEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYLIRP 112
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
YY++ P A + + ++EMNKVAI R V
Sbjct: 113 YYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|112362613|emb|CAL36005.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|46121879|ref|XP_385493.1| hypothetical protein FG05317.1 [Gibberella zeae PH-1]
Length = 1819
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 98/513 (19%), Positives = 207/513 (40%), Gaps = 75/513 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL +DVS SM P + K L+++++I +G++LF
Sbjct: 28 KDAILLAIDVSKSMLEPPPPSDYKKADRDSPVQAALKCAYHLMEQRIISNPKDMMGILLF 87
Query: 51 GTEET---ENELTKEVGGYEH--------VKVLQDIKVVDGHLVQSLKHLPQGTCAGD-- 97
GTE++ E+ ++ GY H V +D+K + + + T + +
Sbjct: 88 GTEKSKFQESGDSRGGLGYPHCYLFTDLDVPAAEDVKALKALVEEGEDEDEVLTPSDEPV 147
Query: 98 FLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 157
+ ++ + + + G + L ++TD +P K+ + + R + L
Sbjct: 148 SMSNVLFCANQIFTTKAANF-GSRRLFIVTDNA----NPHASDKQAKSAAAVRAKDLYDL 202
Query: 158 R-MKNI--VVRASLSGEPH-------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA 207
M ++ + R + + H R + N+ + + KS + S S +
Sbjct: 203 GIMIDLFPITRGDATFDVHKFYDDIIYRDPVGEANMSEVRTSKSGDGLTLLSSLISNVNS 262
Query: 208 RKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKY----SDKAPSTDKFAT 262
++T + +F E++ ++I V Y + P Y +KA + A+
Sbjct: 263 KQT---AKRALFSNLPFEIAPGLRISVKGYNIV-HRQVPARTCYIWLDGEKA----QIAS 314
Query: 263 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 322
E + ED +KV+ K Y++G + V + E +++K ++++GF
Sbjct: 315 GETT-----RIAEDSAKVIEKGDIKKAYKFGGEYVYFTPDEQKSLKDFGSPVIRIIGFKP 369
Query: 323 ASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 381
S + + K +F +E ++ +AL + + + +K+ I C+ R Q ++
Sbjct: 370 RSLLPIWASTKKSTFIFPSEEDYVGSSRVFTALWQKLLKDDKMGIAWCITRANAQPMLAA 429
Query: 382 VL-----TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 436
++ + + S +P + LPF +D+R PS + +++ +
Sbjct: 430 IIPSRERSDDDSGTPYLPAGLWIYPLPFQDDLRNINPPS-----EVLRTSDELTTQMRTI 484
Query: 437 VKMLDLAPSGKGEILQPELTPNPALERFYHHLE 469
V+ L L + + P PNPAL+ Y L+
Sbjct: 485 VQQLQLPKA----MYNPSKYPNPALQWHYRILQ 513
>gi|112362635|emb|CAL35994.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362637|emb|CAL35993.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362639|emb|CAL35992.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|112362625|emb|CAL35999.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|112362627|emb|CAL35998.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362629|emb|CAL35997.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362631|emb|CAL35996.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362633|emb|CAL35995.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362641|emb|CAL35991.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|340509175|gb|EGR34734.1| hypothetical protein IMG5_003060 [Ichthyophthirius multifiliis]
Length = 360
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-----NVSEKINIPDSFYFNV 401
+T AL + M ++A+ + + R+G Q + VL P N ++ P F+
Sbjct: 126 STQMFDALIKQMNIQKQIAVTKIIVRKGSQ-LRFAVLLPQEEEYNYNDHTQTPPGFHLIF 184
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT--PNP 459
LP+ +++ +K P Q ++ + ++K+ L +G EI +L +P
Sbjct: 185 LPYGDEI--------NKIPTLKQ--RKKNLVSIEMLKVTQLLING-LEIKDFDLRNFEDP 233
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF--CGQF--VIKE 515
L++FY HL+ + ++A P +DD L +PD L I+ F C Q +
Sbjct: 234 QLQKFYSHLQAHA-LEEAEPEQIDDLL----QPDSQKLETYSEMINLFKDCLQIESETEN 288
Query: 516 NPKLKKSTRR 525
N LK+ +R
Sbjct: 289 NQYLKQQKKR 298
>gi|256751506|ref|ZP_05492383.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749590|gb|EEU62617.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 270
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 307
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 308 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 367
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 368 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVLETMHFPDEI 170
>gi|112362623|emb|CAL36000.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|289579044|ref|YP_003477671.1| Ku protein [Thermoanaerobacter italicus Ab9]
gi|289528757|gb|ADD03109.1| Ku protein [Thermoanaerobacter italicus Ab9]
Length = 270
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
V E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 55 VSDEEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFI 112
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 113 V--PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|112362643|emb|CAL35990.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362645|emb|CAL35989.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|112362595|emb|CAL36014.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|297545249|ref|YP_003677551.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843024|gb|ADH61540.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 270
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 284 EQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 58 EEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV-- 113
Query: 343 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 397
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 114 PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|417403277|gb|JAA48451.1| Putative dna-binding subunit of a dna-dependent protein kinase ku70
autoantigen [Desmodus rotundus]
Length = 609
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 211/568 (37%), Gaps = 71/568 (12%)
Query: 5 REALLLLLDVSPSM--------HSVLPDVEKLC-SRLIQKKLIYGKNHEVGVILFGTEET 55
R++L+ L+D S +M S D+ C + K+I + V+ +GTE+
Sbjct: 33 RDSLIFLVDASKAMFIKSEDEDESTPFDISIQCIQSVYTSKIISSDRDLLAVVFYGTEKD 92
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY-- 113
+N + ++++ VLQ++ V L F D I G D + +
Sbjct: 93 KNSVN-----FKNIYVLQELDNPGAKRVLELAQFKGRQGQEHFQDRIGCGCDYSLSEVLW 147
Query: 114 --------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 165
+ K + L T+ P + + + + L + ++
Sbjct: 148 VCANLFSDVQVKMSHKRIMLFTNEDDPHGNDNAKASRARTKAGDLRDTGIFLDLMHLKKL 207
Query: 166 ASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
R II E ++L F + S + L LR R ++ + R
Sbjct: 208 GGFDTSLFYRDIISVAEGEDLQVHFQESSKLEDL-------LRRVR-AKETKKRALIRLK 259
Query: 223 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-VKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y T++K P T+E VK +V S ++
Sbjct: 260 FKLSKDIALSVSIYN--------TIQKAVKSPPIRLYRETNEPVKTKTRTFNVNTGSLLL 311
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
P + + + YG + + E E +K E + L+GF + +H+Y++ E
Sbjct: 312 PSDTK-RSRIYGGSHIVLEKEETEQLKRFDEPGLVLIGFKPLIMLKKHHYVRPGLFVYPE 370
Query: 342 PG--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
N +T+ + L + + E +A+ R RQ V L P E +I + P
Sbjct: 371 ESLVNGSSTLFTALLTKCL-EKEVMAVCRYTSRQNIPPYFVA-LMPQEEELDDQRIQVTP 428
Query: 395 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 454
F+ LP+A+D R+ F N +Q + +V+ L + +
Sbjct: 429 PGFHLIFLPYADDKRKVPFTE------KIMANPEQVDKMKAIVQKLRFK-------YRSD 475
Query: 455 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 514
NP L++ + +LE + +D +L K+ E D L S +D F
Sbjct: 476 SFENPVLQQHFRNLEALALDLTEPEQAVDVTLPKVKEMDQRL----GSLVDEFKELVYPP 531
Query: 515 ENPKLKKSTRRFLREKPSGSDEPNGDGS 542
+ +K R+ + SGS P D S
Sbjct: 532 DYSPERKVPRQKRDDGGSGSKRPKLDLS 559
>gi|112362589|emb|CAL36017.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|365763979|gb|EHN05505.1| Yku70p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 602
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|112362579|emb|CAL36022.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|392578958|gb|EIW72085.1| hypothetical protein TREMEDRAFT_26590 [Tremella mesenterica DSM
1558]
Length = 735
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 314 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 368
+K+LGF N+ +RH + L+ E S +T +AL ++ + N+ A+
Sbjct: 460 GIKILGFQSPQNLKFDENIRHSFF----LYPDESTYSGSTRTFAALLKSCLKYNRHALAL 515
Query: 369 CVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 423
C +++ + VL P + P F+ +LP+ +D+R + +
Sbjct: 516 CRFKRNS-TPEFAVLIPQEETFTKEGGQDQPPGFHVIILPYRDDIR----GAPKNMTDNL 570
Query: 424 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 483
E+Q + N+VK L + K + E+ PNP+L Y ++ + +D P
Sbjct: 571 SATERQAQLMSNIVKRLRI----KAGHYRSEVYPNPSLAYHYAQIQALAFEEDFDPSTAT 626
Query: 484 DSLKKI 489
D K +
Sbjct: 627 DLDKTV 632
>gi|51013177|gb|AAT92882.1| YMR284W [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|3765|emb|CAA49840.1| high affinity DNA binding protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|367009714|ref|XP_003679358.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
gi|359747016|emb|CCE90147.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
Length = 582
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 288 KGYRYGPQVVPISSAEWEAVK--FKPEKS-VKLLGFTDASNILRHYY--MKDVNLFIAEP 342
K Y YG + +S ++ ++ + E+S +K++GF L HYY ++ + +
Sbjct: 319 KVYPYGDLDIELSESDIAEIRNDYAGEESFLKVIGFQSTETCL-HYYNNIEKATFVVPDE 377
Query: 343 GNSRATV-AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 401
G ++ +S+L + +++ NKVAIV W + + + + S++ + + FY
Sbjct: 378 GRYEGSIRTLSSLFKNLRQKNKVAIV---WGKLKSNSNPAIFFFVPSDEASPNEGFYLYR 434
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
+PF +++R S + E +EA L+ +L +P NP L
Sbjct: 435 VPFLDELRRIPPMLISHGEIQDDDYENLKEATKKLINHFNLKNG-----FEPSEFKNPGL 489
Query: 462 ERFY---HHLELKSEHQDAAPPPLDD---SLKKITEPDPTLLAESQ 501
++ + H L+ E + P DD K+ E D +L SQ
Sbjct: 490 QKHFKILHDYLLQIEEE----PEKDDVEWQRSKLLEEDDSLRRISQ 531
>gi|6323940|ref|NP_014011.1| Yku70p [Saccharomyces cerevisiae S288c]
gi|1346259|sp|P32807.2|KU70_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=High affinity DNA-binding factor subunit 1
gi|287606|dbj|BAA03648.1| NES24 [Saccharomyces cerevisiae]
gi|825550|emb|CAA89782.1| Nes24p [Saccharomyces cerevisiae]
gi|112362573|emb|CAL36025.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362577|emb|CAL36023.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362581|emb|CAL36021.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362583|emb|CAL36020.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362585|emb|CAL36019.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362587|emb|CAL36018.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362591|emb|CAL36016.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362593|emb|CAL36015.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362597|emb|CAL36013.1| HDF1 protein [Saccharomyces cerevisiae]
gi|207342065|gb|EDZ69944.1| YMR284Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270684|gb|EEU05847.1| Yku70p [Saccharomyces cerevisiae JAY291]
gi|259148872|emb|CAY82117.1| Yku70p [Saccharomyces cerevisiae EC1118]
gi|285814290|tpg|DAA10185.1| TPA: Yku70p [Saccharomyces cerevisiae S288c]
gi|392297457|gb|EIW08557.1| Yku70p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 602
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|402079344|gb|EJT74609.1| hypothetical protein GGTG_08449 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 653
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSR 346
K +++G + V + E +++K ++++GF S I +K +F AE
Sbjct: 341 KAHKFGGEYVHFTPEETKSLKDWGSHVLRIVGFKPRSAIPAWASIKKSTYIFPAEEDYVG 400
Query: 347 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNV 401
+ +AL + + +KVA+ V R ++V ++ +P+ E +P +
Sbjct: 401 SHRVFTALWKKLLRDDKVALAWLVARVNANPILVAIMPSRSPSDDESGTPFLPAGLWLYP 460
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 461
LPFA+D+RE + ++ P + ++ +VK L L P G P PNPAL
Sbjct: 461 LPFADDLREPDKRATARAPKALISEMEK------VVKNLHL-PKG---TYNPAKFPNPAL 510
Query: 462 ERFYHHLE 469
+ Y L+
Sbjct: 511 QWHYRILQ 518
>gi|323303481|gb|EGA57275.1| Yku70p [Saccharomyces cerevisiae FostersB]
Length = 602
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|421074888|ref|ZP_15535907.1| DNA repair protein [Pelosinus fermentans JBW45]
gi|392526948|gb|EIW50055.1| DNA repair protein [Pelosinus fermentans JBW45]
Length = 272
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP E+ +KG+ P Q V IS E E V K + +++ F D I Y+ L
Sbjct: 56 VPKEEIVKGFEVSPEQYVIISPEEIENVYPKSSRRIEIADFVDLEQIDPIYFEHSYYL-T 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
E G + A S L AMK+ K AI V R Q + + P + I + F+
Sbjct: 115 PEKGMEK---AYSLLLIAMKKSQKTAIASFVLRNKQ---YIAAIRP-TNNVITLSTMFFS 167
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
+ + E++ + P+ QPNE++ A L++ L + PE N
Sbjct: 168 DEIISQENLED--LPT-----EEHQPNERELSIALQLIESLSSS-------FTPEKYHNE 213
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
E+ +E K+E Q P+ + K+ + L+A ++++ A
Sbjct: 214 YREKLLSMIESKAEGQVITQQPIIEQGGKVVD----LMAALEASLSAL 257
>gi|112362617|emb|CAL36003.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362619|emb|CAL36002.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + +L+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLRKLYYIRNKIL-ESEKADD 560
>gi|112362621|emb|CAL36001.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 401
++ ++ LA +K + K + +W + + + + +L+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSPSSAKEYN--EGFYLYR 448
Query: 402 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 459
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 460 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 505
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLRKLYYIRNKIL-ESEKADD 560
>gi|344296330|ref|XP_003419862.1| PREDICTED: X-ray repair cross-complementing protein 6 [Loxodonta
africana]
Length = 612
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 273 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 332
+V + S ++P + + + YG + + + E E +K E + L+GF + +H+Y+
Sbjct: 306 NVNNGSLLLPSDTK-RSQSYGSRQIVLEKEETEQLKRFDEPGLTLIGFKPLIMLKKHHYL 364
Query: 333 KDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE- 389
K +LF+ E + +T SAL E +A+ R + R V +L P E
Sbjct: 365 KP-SLFVYPEESLVNGSTALFSALLTKCLEKEVMAVCRYIPRHNSPPYFV-MLVPQDEEL 422
Query: 390 ---KINI-PDSFYFNVLPFAEDVREFQF 413
KI + P F LP+A+D R+ F
Sbjct: 423 DDQKIQVTPPGFQLMFLPYADDKRKVPF 450
>gi|448509059|ref|XP_003866049.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
gi|380350387|emb|CCG20609.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
Length = 609
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 32/222 (14%)
Query: 275 EDPSKVVPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 333
E+ + V + G++Y + VV + EA + + ++GF D S + Y
Sbjct: 285 ENDKEYVKDSEYTYGFKYSQRNVVALLPELEEAATLETSPGINIMGFIDRSKLPVAYLTD 344
Query: 334 DVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVS 388
+ + I PG T VA ++L +A+ E+N AIVR + ++ + + L + NV
Sbjct: 345 EPSYVI--PGAKSETENKVAFNSLVQALIELNCAAIVRYIQKEAHEVQICCALPQSINVG 402
Query: 389 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL------------ 436
EK + L ED + +FP F K + + + N+
Sbjct: 403 EKWG--HGLVLHRLAMKEDEKIGKFPEF-KLSGQEKLDSTMEAFVKNMKLRNDTTEPDVL 459
Query: 437 ----VKMLDLAPSGKGEILQPE-----LTPNPALERFYHHLE 469
V +L+ P E QP L+ PA +RF +++E
Sbjct: 460 KNSKVGLLESKPFTSQEDAQPSLENMLLSSCPATKRFNYYVE 501
>gi|170094156|ref|XP_001878299.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646753|gb|EDR10998.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 653
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 126/586 (21%), Positives = 230/586 (39%), Gaps = 118/586 (20%)
Query: 5 REALLLLLDVSPSMHSVL--PDVEKLCS-----------RLIQKKLIYGKNHEVGVILFG 51
++ +L +D S SM ++ P+ E + + ++ +KK+I G N VG++LF
Sbjct: 28 KDVILFCIDCSESMLALYDDPNYEDVQTCHLYAALEAAMQIQKKKIIVGPNDSVGILLFN 87
Query: 52 -TEETE------NELTKEVGGYEHV------KVLQDIKVVDG------HLVQSL-----K 87
T ++E +E+ K Y+ + KV + I+++D L ++ K
Sbjct: 88 ITRKSEQAQSHASEIKKNTFVYQPITPLGAPKVQELIQLLDAAREDPNELTKTFPPLVGK 147
Query: 88 HLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST 147
+P G + + +++ G K + LITD DP G Q+ T
Sbjct: 148 RVPMGD--------VFTSCNWVLRD-GAPKTASKRVFLITDE----DDPHAGPGSKQLIT 194
Query: 148 IARQMVAFGLRMKNIVVRA---SLSGEP-HMR------VIIENDNLLNIFSKKSSA--KT 195
AR + L + V S +P H+ ++ N N + + SS ++
Sbjct: 195 SARTTL-IDLTQAGVTVEPFFISTENKPFHVSKFYSSVLLPSNLNDEDELQEDSSVLPES 253
Query: 196 LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 255
+ + L + ++ + L+L E I V Y E+K K + D
Sbjct: 254 ISISRIEDLLAQMRFHEVPKRAQYSVPLQLGEGFTIGVKGYGLVTEQKKGAYKYFVDLGD 313
Query: 256 STDKFATHEVKVDYEYKSVEDPSKVV--------------PPEQRIKGY-----RYGPQV 296
+ +D + ++ D +K+ + G+ +YG +
Sbjct: 314 RMEVATVKTTYIDEDQEAEVDKAKIFYGPALGAAAANDDEDNQDADDGFGTRAVKYGNR- 372
Query: 297 VPISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVS 352
P +AE E F+ E +KLLGF D + + +K ++ E S + S
Sbjct: 373 -PFYTAE-EIRSFRTLGLEPGIKLLGFKDRTELAFEDNIKHSQFIYPDEMSYSGSKRTFS 430
Query: 353 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAED 407
AL ++M + K+ + + R+ S + L P EK++ P F+ LPFA+D
Sbjct: 431 ALLKSMIKKEKIGLALALTRR-NSSPIFCYLLPQ-EEKVDDSGWSEPAGFHIIPLPFADD 488
Query: 408 VREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 467
+R + ++ +E ++ A + L S K P+ PNPAL YH+
Sbjct: 489 IRS------APIEEGFRASEDLKDYARAWIDKL----SVKNGTYPPDSYPNPALA--YHN 536
Query: 468 LELKSEHQDAAPPPLDDSLKKITEPD--------PTLLAESQSAID 505
+L++ P DS + +T P LL E +SA++
Sbjct: 537 AQLQASAFREQYDP--DSFEDLTAPKLEMIHKRAGNLLGEWKSAVN 580
>gi|340960213|gb|EGS21394.1| hypothetical protein CTHT_0032510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1710
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 324
V+VD E ++V D S++ +K +++G + + E A++ K ++L+GF S
Sbjct: 325 VRVDSEARTV-DKSEI------MKAWKFGGEFIRFKPEEAAALREFGSKVLRLIGFKPRS 377
Query: 325 NILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 383
+ + K V ++ +E +T SAL + + + +K+ I + R Q +V ++
Sbjct: 378 MLPSWASVKKSVFIYPSEELFVGSTRVFSALWQKLLKDDKIGIAWFIPRVNSQPQIVAII 437
Query: 384 -TPNVSEKIN----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 438
+ N E+ +P + LPFA+DVR+ + P ++ E A + +
Sbjct: 438 PSENPDEEGAATPYLPAGLWLYPLPFADDVRKVDASA---------PPKKADELATKMRE 488
Query: 439 MLDLAPSGKGEILQPELTPNPALERFYHHLE 469
++ KG I P PNPAL+ Y L+
Sbjct: 489 IVGNLQLPKG-IYNPLKYPNPALQWHYRVLQ 518
>gi|326203361|ref|ZP_08193226.1| Ku protein [Clostridium papyrosolvens DSM 2782]
gi|325986619|gb|EGD47450.1| Ku protein [Clostridium papyrosolvens DSM 2782]
Length = 310
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V P+ ++G+ Y P + V +S ++E+++ K EK+V++L F + Y+ K
Sbjct: 52 NKEVQPDDIVRGFEYEPGKYVIMSGEDFESLQVKSEKAVEILDFVKLEEVDPVYFDKTYF 111
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|115433678|ref|XP_001216976.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
gi|114189828|gb|EAU31528.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
Length = 674
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 274 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LR 328
+D ++ + + K Y++G V S E + ++ + ++++GF S + ++
Sbjct: 328 ADDTARTIEKWEVKKAYKFGGDQVSFSPEELKELRNFGDPVIRIIGFKPLSALPFWANVK 387
Query: 329 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 388
H + ++ +E +T SAL + + K+A+V + R+ V+ ++
Sbjct: 388 HPFF----IYPSEEDFIGSTRVFSALHQTLLRDKKLALVWFIPRKNGAPVLGAMIAGQ-- 441
Query: 389 EKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 442
EK++ P + LPFA+DVR+ S S P +P Q +++ L L
Sbjct: 442 EKLDENGVQKFPPGMWIIPLPFADDVRQNPETSLSVAP---EPLIDQMRF---IIQQLQL 495
Query: 443 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 488
P G + +P PNP+L+ Y L+ + +D P D ++ K
Sbjct: 496 -PKG---VYEPSKYPNPSLQWHYRILQALALDEDLPEQPEDKTVPK 537
>gi|237748320|ref|ZP_04578800.1| Ku protein [Oxalobacter formigenes OXCC13]
gi|229379682|gb|EEO29773.1| Ku protein [Oxalobacter formigenes OXCC13]
Length = 262
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 271 YKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 329
Y+ + + E ++G++Y + V ++ + E +K + + S+ +L FTD S+I
Sbjct: 43 YRKTDGAGHELKNEDIVRGFQYEKDRYVIVTDDDIEKIKTEKDNSIDILLFTDLSSIPTV 102
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 389
Y+ K ++ G+ +A L RAMK+ KVAI + V G + ++ + V E
Sbjct: 103 YFNKSY-YCVSGKGSEKA---FELLQRAMKDTGKVAIGKTVI--GTKETMLAL----VPE 152
Query: 390 KINIPDSFYFNVLPFAEDVREF 411
K D L F +++RE
Sbjct: 153 K----DGILLQTLYFHDEIREI 170
>gi|340385866|ref|XP_003391429.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 258
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 318 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 376
+GF S + H+Y+K N ++ E S +T S L R VA+ + + R
Sbjct: 1 MGFRPKSKMKMHHYIKPANFIYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSP 60
Query: 377 SVVVGVLTPNVSE----KINI-PDSFYFNVLPFAEDVREFQFP 414
+ V L P E I I P F+ LPF+ED+R P
Sbjct: 61 PIFVA-LVPQEEELDDSSIQISPPGFHVIFLPFSEDIRSLDLP 102
>gi|190408510|gb|EDV11775.1| yeast Ku70 protein [Saccharomyces cerevisiae RM11-1a]
Length = 602
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNVKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 489
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|335039620|ref|ZP_08532775.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180477|gb|EGL83087.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
Length = 270
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
V ++ +KGY Y V + E EA+ K++ ++ F I Y+ + L
Sbjct: 55 VDQDEIVKGYEYDKGHFVVLDDDELEAIAAAKSKTIDIIDFIQLKEIDPIYFNRSYFLGP 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
E G A + L RAM+E KVAI + + R +Q + V
Sbjct: 115 TENGEK----AYTLLKRAMEETEKVAIAKFILRAKEQLAAIRV 153
>gi|147677577|ref|YP_001211792.1| hypothetical protein PTH_1242 [Pelotomaculum thermopropionicum SI]
gi|146273674|dbj|BAF59423.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 286
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 281 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKDVNL 337
VP ++ ++GY Y G VV ++ A++E + + ++SV++L F D + I YY K L
Sbjct: 55 VPLDEIVRGYEYEKGRYVV-LTEADFENLAGEDGKRSVEILDFVDLAEIDPLYYEKAYYL 113
Query: 338 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 397
PG+ A V L RAM E K A+ R R Q + V ++
Sbjct: 114 ---APGDGGAKV-YELLKRAMSETGKAAVARVAIRSRQSLAAIRVSG----------NAL 159
Query: 398 YFNVLPFAEDVREFQFPSFSKFPVSWQPNE 427
N++ + +++++ ++ VS NE
Sbjct: 160 VMNLMHYPDEIQKADAIPEMQYEVSLHQNE 189
>gi|365879007|ref|ZP_09418451.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292995|emb|CCD90982.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 309
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 276 DPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRH 329
D + VP E +KGY Q + +S E E + + +++++ F D ++I +R
Sbjct: 53 DTGEEVPNEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYLIRP 112
Query: 330 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
YY++ P A + + ++EMNKVAI R V
Sbjct: 113 YYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|54020912|ref|NP_001005700.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus (Silurana) tropicalis]
gi|49523218|gb|AAH75271.1| thyroid autoantigen 70kDa (Ku antigen) [Xenopus (Silurana)
tropicalis]
Length = 611
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 22/194 (11%)
Query: 283 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 342
P + YG + + + E E +K E S+ L+GF + + +H++ + E
Sbjct: 311 PSDTKRSQTYGNRQIVLEKDETEQLKRFDEPSLVLIGFKPITFLKKHHFTRPAQFIYPEE 370
Query: 343 G--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--KINI---PD 395
N T+ + L R + + +AI R R+ V L P E NI P
Sbjct: 371 SLINGSTTLFHALLLRCLAQ-QVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNIQSKPP 428
Query: 396 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 455
F LPFA+D+R+ P NE+Q + +V L + +
Sbjct: 429 GFNLVFLPFADDIRKIDPPE------KITANEEQVDKMKEIVHKLRFN-------FRSDS 475
Query: 456 TPNPALERFYHHLE 469
NP L++ + +LE
Sbjct: 476 FENPVLQQHFRNLE 489
>gi|323335992|gb|EGA77268.1| Yku70p [Saccharomyces cerevisiae Vin13]
Length = 537
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 403
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 404 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 461
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 462 ERFY 465
++ Y
Sbjct: 505 QKHY 508
>gi|302758134|ref|XP_002962490.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
gi|300169351|gb|EFJ35953.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
Length = 564
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 292 YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVA 350
Y + V ++ E VK + V+LLGF + + ++ ++ L+ +E +T
Sbjct: 266 YNSKRVLMTREELAEVKKITDVQVRLLGFKSIACLKDYHNLRPATFLYPSEEAIKGSTCL 325
Query: 351 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN---VSEKINI-PDSFYFNVLPFAE 406
AL R++ K A+ + S + L P V+E + P + LP+AE
Sbjct: 326 FIALHRSLIRQKKFALA---FHGNSTSPHLVALVPQEEIVNEYGQVQPPGMHMIYLPYAE 382
Query: 407 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYH 466
D+R+ + + SK V E +A L+K L L +I NPAL+R Y
Sbjct: 383 DIRQPEKINLSKGGVEIAAKEHIDKAM-ALIKKLHLREFTVYDI------QNPALQRHYS 435
Query: 467 HLELKSEHQDAAPPPLDDSLKKITEPD------PTLLAESQSAIDAFCG 509
+L+ +D + ++ T PD P+++A Q+ D G
Sbjct: 436 NLQALGLQEDTV-----EDVEDCTLPDEEGMKRPSIVAVVQAFKDTVYG 479
>gi|261328689|emb|CBH11667.1| KU80 protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 634
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA-----RKTRDISPVTIFR-GDLELSEK 228
RV ++N+ +L K + + +L A RK R ++ T+F G++ L+
Sbjct: 190 RVKVDNETVLYTLCKALGNDSRVITLRDALVSAAQLVCRKVRSLAQKTVFTIGEVRLATN 249
Query: 229 MKIKVW-VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRI 287
+ KV ++ PT ++ P + K A H D E +E E
Sbjct: 250 VLGKVRRMHVPANRTPAPT-----ERVPGSRK-AAHSQLFDEETLRLEGGE-----EDSQ 298
Query: 288 KGYRYGPQVVPISSAE---WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---- 340
K P P +S+ EA K + + + + + + H + D + IA
Sbjct: 299 KTCLETPVNKPTASSSNRLSEATKIRGSRGIDAVACIPQNQVPVHVLVVDTSYMIAPLDD 358
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ-GQQSVVVGVLTPNVSEKINIPDSFYF 399
+P +RA ++ +A+ + +VR V G ++ + V E D +
Sbjct: 359 DPVGTRA---FRSIVKALAAQDSALVVRYVRSTDGNPNMFLCVPLTTGDE-----DVLFM 410
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
+ LPF E++R +FP+ + + E + LV + + E+L P NP
Sbjct: 411 SRLPFMEEIRCLRFPTLQEMEMECDIPEADAQREQELVSSIVEEMTVGEEVLHPHRVLNP 470
Query: 460 ALERFY 465
++++Y
Sbjct: 471 FVQQYY 476
>gi|162450936|ref|YP_001613303.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
gi|161161518|emb|CAN92823.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
Length = 320
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 41/183 (22%)
Query: 287 IKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---E 341
++GY Y G VV +S + + ++V +L F DAS I YY D F+A +
Sbjct: 62 VRGYPYEKGEYVV-LSDEDLRRANVEATQTVDILDFVDASEIDPIYY--DKPYFLAPASQ 118
Query: 342 PGNSRATVAVSALAR-AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 400
G R+ V L R A+++ KV I + V R + + + P+ N
Sbjct: 119 NGKKRSPVTAYVLLREALRKTGKVGIAKVVIRTREH---IAAVRPHGR-------GLVLN 168
Query: 401 VLPFAEDVR---EFQFPSF-------------------SKFPVSWQPNEQQQEAADNLVK 438
+L FA ++R E P ++ +W+P + + E D+++K
Sbjct: 169 LLRFAHELRSDEELDLPEMDAQGKGLGKRELEMAERLVAEMATAWEPEKYKDEYRDDVMK 228
Query: 439 MLD 441
+++
Sbjct: 229 LIE 231
>gi|388856813|emb|CCF49600.1| related to ATP-dependent DNA helicase II, 70 kDa subunit [Ustilago
hordei]
Length = 716
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VG+++F ET
Sbjct: 39 KDMVLFCIDAGPSMHRIDPTANTSPLYFALKAAASLMQKKLISSPHDHVGLLIFNCAETL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FRSAKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|392394601|ref|YP_006431203.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525679|gb|AFM01410.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
Length = 320
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 262 THEVKVDYEYKSVEDPSKV----------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 311
THE +Y +K + + V E +KGY Y I E A P
Sbjct: 26 THEFHFNYLHKDCHNRLRYIKKCPHCEVEVAAENIVKGYEYEKDHYVIMEEEDLATLEAP 85
Query: 312 -EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
+S+ +L F D S+I YY K L E + A L +AM + KVAI +
Sbjct: 86 MSRSIDILDFIDLSDIDPVYYQKSYYLSPEETAHK----AYKLLCQAMSDTGKVAIAKLT 141
Query: 371 WRQGQQSVVVGVLTPNV 387
R Q + V+ NV
Sbjct: 142 MRSKQHLACLRVIDQNV 158
>gi|395540722|ref|XP_003772300.1| PREDICTED: X-ray repair cross-complementing protein 6 [Sarcophilus
harrisii]
Length = 610
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVEK----LCSRLIQK----KLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M + + + L + IQ K+I + V+ +GT++ +
Sbjct: 34 RDSLIFLVDASKAMFELQAEDGRTSFDLTIQCIQSVYSSKIISSDRDLLAVVFYGTDKDK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + + ++ VL ++ + + +L F + I G D + +
Sbjct: 94 NSVN-----FRNIYVLHELDIPGAKRILALDQFKGKQGEKHFQELIGCGSDYSLAEALWV 148
Query: 114 -GETYKG------KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG--LRMKNIVV 164
+ G K + L T+ P D TK + T A + G L + N+
Sbjct: 149 CANLFSGVRLKMSHKRVMLFTNNDSP--HGDDSTKASRAKTKACDLRDTGIFLDLMNLKK 206
Query: 165 RASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 222
R II D L + ++S D +R A++TR S + R
Sbjct: 207 PGGFDISLFYRDIITPGKDEDLGVHFEESGR---LEDLLRKVR-AKETRKRS---LARLK 259
Query: 223 LELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
L L + + + + +Y + + P ++ Y + +VK+ +VE S ++
Sbjct: 260 LRLGKDVALTISIYNMVQKAFRPPPIRLYRE--------TNEQVKIKTRTFNVETGSLLL 311
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
P + + + YG + + + E E +K E + L+GF + +H++++ E
Sbjct: 312 PSDTK-RAQTYGGRQIVMEKEETEELKRFDEPGLILIGFKPLFMLKQHHFLRPSLFVYPE 370
Query: 342 PG--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
N T+ V+ L + + E +A+ R RQ V L P E ++ + P
Sbjct: 371 ESLVNGSTTLFVALLTKCL-EKGVLALCRYTPRQNSPPYFVA-LIPQEEELDVQRVQVTP 428
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R+ F
Sbjct: 429 PGFQLVFLPYADDKRKVPF 447
>gi|16116698|emb|CAC86188.1| KU80 protein [Trypanosoma brucei]
Length = 634
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 175 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA-----RKTRDISPVTIFR-GDLELSEK 228
RV ++N+ +L K + + +L A RK R ++ T+F G++ L+
Sbjct: 190 RVKVDNETVLYTLCKALGNDSRVITLRDALVSAAQLVCRKVRSLAQKTVFTIGEVRLATN 249
Query: 229 MKIKVW-VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRI 287
+ KV ++ PT ++ P + K A H D E +E E
Sbjct: 250 VLGKVRRMHVPANRTPAPT-----ERVPGSRK-AAHSQLFDEETLRLEGGE-----EDSQ 298
Query: 288 KGYRYGPQVVPISSAE---WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---- 340
K P P +S+ EA K + + + + + + H + D + IA
Sbjct: 299 KTCLETPVNKPTASSSNRLSEATKIRGSRGIDAVACIPQNQVPVHVLVVDTSYMIAPLDD 358
Query: 341 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ-GQQSVVVGVLTPNVSEKINIPDSFYF 399
+P +RA ++ +A+ + +VR V G ++ + V E D +
Sbjct: 359 DPVGTRA---FRSIVKALAAQDSALVVRYVRSTDGNPNMFLCVPLTTGDE-----DVLFM 410
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
+ LPF E++R +FP+ + + E + LV + + E+L P NP
Sbjct: 411 SRLPFMEEIRCLRFPTLQEMEMECDIPEADAQREQELVSSIVEEMTVGEEVLHPHRVLNP 470
Query: 460 ALERFY 465
++++Y
Sbjct: 471 FVQQYY 476
>gi|388583769|gb|EIM24070.1| ATP-dependent DNA helicase ii [Wallemia sebi CBS 633.66]
Length = 653
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 19/109 (17%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE----------------KLCSRLIQKKLIYGKNHEVGV 47
TR+A L ++D + M P + R +++K + VGV
Sbjct: 23 TRDASLFVIDAAAGMQEYPPSQDPNDRIDEEMPLLHRTFDAILRCLKRKAFNSSDDLVGV 82
Query: 48 ILFGTEETENELTKEVGGY-EHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
I++ TEET+ + KE EHV LQ I+ ++G+ +++LK L G+ A
Sbjct: 83 IIYNTEETKPD--KEGSDVKEHVYCLQPIEQLNGNNIRNLKKLVDGSRA 129
>gi|296818197|ref|XP_002849435.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839888|gb|EEQ29550.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 608
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 64/256 (25%)
Query: 288 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 346
K Y++G + + + E ++ E +++++GF S++ MK ++ +E G +
Sbjct: 354 KAYKFGGEQISFTQEEQAELRNFGEPTIRIIGFKPLSSLPIWASMKHPTFIYPSEEGRNA 413
Query: 347 ATVAVSALARAMK-EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 405
A V + +A A K + N I IP + LPFA
Sbjct: 414 APVMAAMIAGAEKLDENDTQI--------------------------IPPGMWILPLPFA 447
Query: 406 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-------KMLDLAPSGKGEILQPELTPN 458
+D+R+ P + D+LV + L L P GK P PN
Sbjct: 448 DDIRQ-------------NPETNHITSPDSLVDKMRPIIQQLQL-PKGK---FDPYKYPN 490
Query: 459 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 518
P+L+ Y L+ + +D P D ++ K AID G+ VI +
Sbjct: 491 PSLQWHYRILQALALDEDVPEQPEDKTIPKY------------RAIDKRAGELVIAWGEE 538
Query: 519 LKKSTRRFLREKPSGS 534
L+ R + +P S
Sbjct: 539 LESQYRTLEKSQPVTS 554
>gi|71022129|ref|XP_761295.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
gi|46097789|gb|EAK83022.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
Length = 713
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VGV++F +T
Sbjct: 39 KDMVLFCIDAGPSMHRIDPATNTSPLYSALKAAASLMQKKLISSPHDHVGVLIFNCADTL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FHSVKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|301787821|ref|XP_002929325.1| PREDICTED: x-ray repair cross-complementing protein 6-like
[Ailuropoda melanoleuca]
Length = 607
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 165/439 (37%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M +VE + + K+I + V+ +GTE+ +
Sbjct: 33 RDSLIFLVDGSRAMFESQGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFYGTEKDK 92
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + ++++ VLQ++ V L F D I G D + +
Sbjct: 93 NSVN-----FKNIYVLQELDNPGAKRVLELDQFKGEQGKKHFQDLIGHGSDYSLSEVLWV 147
Query: 114 -------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K + L T+ P D + + L + ++ R
Sbjct: 148 CANLFSDVRVKMSHKRVMLFTNEDDPHGDDSAKASRARTKAGDLRDTGIFLDLMHLRKRG 207
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R II E+++L F + S + L LR R ++ + R
Sbjct: 208 GFDISLFYRDIISTAEDEDLGVHFEESSKLEDL-------LRKVR-AKETRKRVLQRLKF 259
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y + K P ++ Y + P K T V + ++
Sbjct: 260 KLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNV----------NTGSLL 309
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-- 339
P + YG + + + E E +K E + L+GF + +H+Y++ +LF+
Sbjct: 310 LPSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRP-SLFVYP 368
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
E + ++ SAL E +A+ R RQ V +L P E KI + P
Sbjct: 369 EESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALL-PQEEELDDQKIQLTP 427
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R F
Sbjct: 428 PGFQLVFLPYADDKRRVPF 446
>gi|412994086|emb|CCO14597.1| predicted protein [Bathycoccus prasinos]
Length = 832
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 95/248 (38%), Gaps = 27/248 (10%)
Query: 249 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSK----VVPPEQRIKGYRYGPQVVPISSAEW 304
KY D D T V +D E V P K + P +Q++ Q +S +
Sbjct: 446 KYVDAEDHQD-LRTETVYLDKESGEVVAPKKSYLEIGPEKQKVIVKNAEKQATYAASKNF 504
Query: 305 EAVKFKPEKSVKLLGFTDASNIL-RHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMN 362
A K + LGF D S + R +K F+ A+ A SAL A E +
Sbjct: 505 HANACKL--GMHCLGFVDTSEVTQRDRLLKGQGKFVRADETVFGGKEAFSALLTACAERH 562
Query: 363 KVAIVRCVWRQGQQSVVVGVLTPNVSEK--INIPDSFYFNVLPFAEDVREFQFPSFSKFP 420
+ V+ Q V L P V + +P F+ +PF +D+R+ + + K
Sbjct: 563 VSMLCADVYNAKSQVKYV-ALIPQVENDAYLGVPAGFHVVKVPFRDDLRQPE-KAIGKSA 620
Query: 421 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE--------LKS 472
E Q +AA+ LV+ L+L P NP L+ Y LE ++
Sbjct: 621 PQTSATETQIQAAEALVESLELQE------YHPTRISNPELQAHYKALEAIALNKRKVEK 674
Query: 473 EHQDAAPP 480
D APP
Sbjct: 675 ISDDTAPP 682
>gi|112362603|emb|CAL36010.1| HDF1 protein [Saccharomyces kudriavzevii]
Length = 560
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 287 IKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 343
+K Y YG + S + + V + + ++++GF +S + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINFSENQNQIVMEAYTQKDAFLRIIGFRSSSKAIHYFNNIEKSTFIV-PD 390
Query: 344 NSRATVAVSALARAMKEMNKVAIVRCVWRQ--GQQSVVVGVLTPNVSEKINIPDSFYFNV 401
++ +V L K + K + +W + + VL+P+ ++ N + FY
Sbjct: 391 EAKYEGSVRTLTSLFKTLRKKDKIAILWGKLKSNSHASLFVLSPSSIKEYN--EGFYLYR 448
Query: 402 LPFAEDVREF----QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTP 457
+PF +++R+F + + K+ + + E ++ N++ +L P
Sbjct: 449 VPFLDEIRKFPSLLSYDNGEKYKLDY---ENMKKITQNIIGYFNLKDG-----YNPSDFK 500
Query: 458 NPALERFY---HHLELKSEHQDAAPPPLDDSLKKITEPDPTL 496
NP+L++ + H L+ E D L KI D +L
Sbjct: 501 NPSLQKHFKVLHDYLLQIETTPEGNETPDAKLNKIIHEDDSL 542
>gi|281340934|gb|EFB16518.1| hypothetical protein PANDA_019481 [Ailuropoda melanoleuca]
Length = 582
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 167/439 (38%), Gaps = 55/439 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLIQ----KKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M +VE + + IQ K+I + V+ +GTE+ +
Sbjct: 8 RDSLIFLVDGSRAMFESQGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFYGTEKDK 67
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKY--- 113
N + ++++ VLQ++ V L F D I G D + +
Sbjct: 68 NSVN-----FKNIYVLQELDNPGAKRVLELDQFKGEQGKKHFQDLIGHGSDYSLSEVLWV 122
Query: 114 -------GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 166
K + L T+ P D + + L + ++ R
Sbjct: 123 CANLFSDVRVKMSHKRVMLFTNEDDPHGDDSAKASRARTKAGDLRDTGIFLDLMHLRKRG 182
Query: 167 SLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 223
R II E+++L F + S + L LR R ++ + R
Sbjct: 183 GFDISLFYRDIISTAEDEDLGVHFEESSKLEDL-------LRKVR-AKETRKRVLQRLKF 234
Query: 224 ELSEKMKIKVWVYKKTGEE-KFPTLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPSKVV 281
+LS+ + + V +Y + K P ++ Y + P K T V + ++
Sbjct: 235 KLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNV----------NTGSLL 284
Query: 282 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-- 339
P + YG + + + E E +K E + L+GF + +H+Y++ +LF+
Sbjct: 285 LPSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRP-SLFVYP 343
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 394
E + ++ SAL E +A+ R RQ V +L P E KI + P
Sbjct: 344 EESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALL-PQEEELDDQKIQLTP 402
Query: 395 DSFYFNVLPFAEDVREFQF 413
F LP+A+D R F
Sbjct: 403 PGFQLVFLPYADDKRRVPF 421
>gi|322417662|ref|YP_004196885.1| Ku protein [Geobacter sp. M18]
gi|320124049|gb|ADW11609.1| Ku protein [Geobacter sp. M18]
Length = 258
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K VP E+ +KGY Y + + ++ ++E + + ++ F D I Y+ K
Sbjct: 52 NKEVPYEEIVKGYEYSDGEYIVLTDQDFENASLEKSHLIDIIDFIDEKEIDTRYFEKP-- 109
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR-QGQQSVVVGVLTPNVSEKINIPD 395
+ EP S A + L A+K KV + V R +G +V + V +I D
Sbjct: 110 -YYLEPDRS-GPKAYALLREALKRSGKVGVANYVLRNRGSLGIVRPLDNLLVLNQIRYSD 167
Query: 396 SFYFNV---LPFAEDVRE----FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 447
LP E++RE + V + P + + + D+L ++++ G+
Sbjct: 168 EVRDASDLKLPGDENIREQEVALALSLIDQLTVKFDPAKYRDQYIDDLKRLIEEKAQGR 226
>gi|27376699|ref|NP_768228.1| hypothetical protein blr1588 [Bradyrhizobium japonicum USDA 110]
gi|27349840|dbj|BAC46853.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+KVD +D VP E +KGY Q + ++ E E + + +++++ F D
Sbjct: 53 IKVD------QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDK 106
Query: 324 SNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
S I +R YY++ P A + + ++EMNKVAI R V
Sbjct: 107 SEIDPRYLIRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
>gi|384221927|ref|YP_005613093.1| hypothetical protein BJ6T_82610 [Bradyrhizobium japonicum USDA 6]
gi|354960826|dbj|BAL13505.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 6]
Length = 323
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 265 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDA 323
+KVD +D VP E +KGY Q + ++ E E + + +++++ F D
Sbjct: 53 IKVD------QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDK 106
Query: 324 SNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 370
S I +R YY++ P A + + ++EMNKVAI R V
Sbjct: 107 SEIDPCYLIRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
>gi|195398021|ref|XP_002057623.1| GJ18003 [Drosophila virilis]
gi|194141277|gb|EDW57696.1| GJ18003 [Drosophila virilis]
Length = 701
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 154/377 (40%), Gaps = 52/377 (13%)
Query: 278 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS--VKLLGFTDASNILRHYYMKD 334
++V P PE I GY G VP V+ P S + +GF S+I Y+ +
Sbjct: 278 TEVTPLPEDLIDGYMLGGTPVPYDET---LVELPPAHSPGLHFVGFVKRSSIPDAYFSGN 334
Query: 335 -VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 393
+ + + + GN + + AL RA+ + ++ + + VL P S ++
Sbjct: 335 SLYMLVHQKGNVVSAQKLDALVRALILQKCAVLCWKIFSVKFNTPRIVVLVPQES-TVDR 393
Query: 394 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG----- 448
P + Y L + + + FP+ + N Q +A D L+ +DL + +
Sbjct: 394 PATLYMLELSYHAQHQFWDFPALRTAKT--ECNADQLQAVDTLIDSMDLECTLQDTQQPR 451
Query: 449 EILQPELTPNPALERFYHH-----LELKSEHQDAAPPP----LDDS-----LKKITEPDP 494
+ Q +L P L + LE K + + P LDD ++ EP
Sbjct: 452 QQRQNDLLPFDGLPSIFEQNVMDVLERKVINSAKSDPQFKAMLDDKNLVDFFWRVPEP-- 509
Query: 495 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 554
+ +S+ A A F ++ + +L++ + +E N +V + ++
Sbjct: 510 -IEQKSKQAAKALKKLFPLEH-------SHAWLQKLKAKEEEQNAPPTVKQERR----DT 557
Query: 555 KPVVTVDKIGDLTPIQDFEAMMSR-RDCPDWVDKAIE------DMKNKIFGLLENSNEGI 607
+ +++D +G +TP +D++ ++ + R + + ++ M+ I LLE + +
Sbjct: 558 QTSISIDSVGLMTPAEDYKQLLQKVRSEINTTQRDVQFQSLAAQMRVVIITLLERNKLDL 617
Query: 608 NYPKAVELLVALRKGCI 624
N + E+L R C+
Sbjct: 618 N--QLNEVLTLYRDSCL 632
>gi|376259763|ref|YP_005146483.1| Ku protein [Clostridium sp. BNL1100]
gi|373943757|gb|AEY64678.1| Ku protein [Clostridium sp. BNL1100]
Length = 311
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 278 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 336
+K V PE ++G+ Y P + V ++ ++E+++ K EK+V+++ F + Y+ K
Sbjct: 52 NKEVQPEDIVRGFEYEPGKYVIMNGEDFESLQVKSEKTVEIVDFVKLEEVDPVYFDKTYF 111
Query: 337 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 382
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|134299850|ref|YP_001113346.1| Ku domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052550|gb|ABO50521.1| DNA end-binding protein Ku [Desulfotomaculum reducens MI-1]
Length = 280
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 284 EQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 341
E+ +KGY Y G VV + ++E + + KS+ ++ F D ++I Y+ K L E
Sbjct: 58 EEIVKGYEYEKGKYVV-MKDEDFENLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGE 116
Query: 342 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ----SVVVGVLTPN 386
G L R+M+E KVA+ + + R + V GVLT N
Sbjct: 117 GGQK----VYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTIN 161
>gi|442805053|ref|YP_007373202.1| DNA repair protein [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740903|gb|AGC68592.1| DNA repair protein [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 274
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 287 IKGYRYGP-QVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 344
++G+ Y P V ++ A++EA K K++++L F + S I Y+ K L E G
Sbjct: 61 VRGFEYEPGHFVILNDADFEAAKGSSGGKNIEILDFVNLSEIDPVYFDKTYYLSPQETGA 120
Query: 345 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPF 404
A + L RAM + K+AI R R + + V ++ L +
Sbjct: 121 K----AYNLLRRAMSDTGKIAIARVTIRSKETLAALRVYK----------NALVMETLFY 166
Query: 405 AEDVREF-QFPSFSKFPVSWQPNEQQQEAADNLVKML 440
A++VR Q P P + NE++ + A L++ L
Sbjct: 167 ADEVRPAEQIPG---LPEVTETNEKELDIAVKLIESL 200
>gi|241681420|ref|XP_002411604.1| ku P70 DNA helicase, putative [Ixodes scapularis]
gi|215504344|gb|EEC13838.1| ku P70 DNA helicase, putative [Ixodes scapularis]
Length = 575
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 28/246 (11%)
Query: 262 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 321
T+E + +D +V+ P K YG + +E + +K ++LLGF
Sbjct: 258 TNEELLSRRLTYAQDNGEVLMPGDIAKCQEYGGKKALFDLSELKQMKAMAPPGLQLLGFK 317
Query: 322 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW-RQGQQSVVV 380
+ ++++ + + G R + + A +KVA V C W +G Q+ +
Sbjct: 318 PLERLRAQHHVRPSHFVYPDEGTIRGSTRLFAALLQSCLRHKVAPV-CYWVSRGAQAPKL 376
Query: 381 GVLTPNVSEK-----INIPDSFYFNVLPFAEDVREFQFPSF--SKFPVSWQPNEQQQEAA 433
L E+ +P F+ LPF++D R Q S P S A
Sbjct: 377 VYLLAQEEERDSHGLQQMPPGFHVVQLPFSDDRRRLQGLDCRSSSAPRSL------VSLA 430
Query: 434 DNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD------DSLK 487
LV+ L P+ NP L+RF+ LE + +D +D D +K
Sbjct: 431 SKLVQQLRFP-------YHPDNFENPELQRFWRCLEALALDRDVVETSVDYTRPNHDKMK 483
Query: 488 KITEPD 493
+ E D
Sbjct: 484 QKAEKD 489
>gi|392961884|ref|ZP_10327337.1| DNA repair protein [Pelosinus fermentans DSM 17108]
gi|421055796|ref|ZP_15518758.1| Ku protein [Pelosinus fermentans B4]
gi|421058569|ref|ZP_15521248.1| DNA repair protein [Pelosinus fermentans B3]
gi|421064845|ref|ZP_15526675.1| DNA repair protein [Pelosinus fermentans A12]
gi|421072417|ref|ZP_15533527.1| DNA repair protein [Pelosinus fermentans A11]
gi|392439561|gb|EIW17272.1| Ku protein [Pelosinus fermentans B4]
gi|392445922|gb|EIW23229.1| DNA repair protein [Pelosinus fermentans A11]
gi|392453217|gb|EIW30105.1| DNA repair protein [Pelosinus fermentans DSM 17108]
gi|392460242|gb|EIW36567.1| DNA repair protein [Pelosinus fermentans A12]
gi|392460525|gb|EIW36816.1| DNA repair protein [Pelosinus fermentans B3]
Length = 272
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 281 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 339
VP E+ +KG+ P Q V +S E E V K + +++ F D I Y+ L
Sbjct: 56 VPKEEIVKGFEVSPEQYVILSPEEMENVYPKSSRRIEIADFVDLEQIDPIYFEHSYYL-T 114
Query: 340 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 399
+ G + A S L AMK+ K AI V R Q + + P + I + F+
Sbjct: 115 PDKGMEK---AYSLLLIAMKKSQKTAIASFVLRNKQ---YIAAIRP-TNNVITLSTMFFS 167
Query: 400 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 459
+ + E++ + P+ QPNE++ A L++ L + PE N
Sbjct: 168 DEIISQENLED--LPT-----EEHQPNERELSIALQLIESLSSS-------FTPEKYHNE 213
Query: 460 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 507
E+ +E K+E Q P+ + K+ + L+A ++++ A
Sbjct: 214 YREKLLSMIESKAEGQVITQQPIIEQGGKVVD----LMAALEASLSAL 257
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,340,619,240
Number of Sequences: 23463169
Number of extensions: 442813903
Number of successful extensions: 1120435
Number of sequences better than 100.0: 798
Number of HSP's better than 100.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 580
Number of HSP's that attempted gapping in prelim test: 1118346
Number of HSP's gapped (non-prelim): 1223
length of query: 662
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 513
effective length of database: 8,863,183,186
effective search space: 4546812974418
effective search space used: 4546812974418
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)